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ONTOLOGY REPORT - ANNOTATIONS


Term:spermatid development
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Accession:GO:0007286 term browser browse the term
Definition:The process whose specific outcome is the progression of a spermatid over time, from its formation to the mature structure.
Synonyms:exact_synonym: spermatid cell development;   spermiogenesis
 xref: Wikipedia:Spermiogenesis


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spermatid development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACRBP acrosin binding protein ISO (MGI:5789676|PMID:27303034) UniProt PMID:27303034 MGI:5789676 NCBI chr12:6,768,971...6,778,613
Ensembl chr12:6,685,963...6,695,344
JBrowse link
G ADAD1 adenosine deaminase domain containing 1 ISO (MGI:3530700|PMID:15649457) MGI PMID:15649457 MGI:3530700 NCBI chr 4:114,574,953...114,625,948
Ensembl chr 4:125,710,502...125,760,980
JBrowse link
G ADRM1 adhesion regulating molecule 1 ISO (MGI:4849324|PMID:21048919) BHF-UCL PMID:21048919 MGI:4849324 NCBI chr20:58,667,601...58,673,566
Ensembl chr20:59,985,358...59,991,668
JBrowse link
G AFF4 AF4/FMR2 family member 4 ISO (MGI:3586405|PMID:16024815) MGI PMID:16024815 MGI:3586405 NCBI chr 5:128,292,700...128,374,511
Ensembl chr 5:134,457,398...134,532,625
JBrowse link
G ALMS1 ALMS1 centrosome and basal body associated protein ISO (MGI:3698928|PMID:17206865)
(MGI:3639060|PMID:16513793)
MGI PMID:16513793, PMID:17206865 MGI:3639060, MGI:3698928 NCBI chr2A:73,438,657...73,671,313
Ensembl chr2A:74,926,650...75,152,139
JBrowse link
G BBS4 Bardet-Biedl syndrome 4 ISO (MGI:3044824|PMID:15173597) MGI PMID:15173597 MGI:3044824 NCBI chr15:51,601,526...51,656,460
Ensembl chr15:70,362,261...70,416,964
JBrowse link
G BRIP1 BRCA1 interacting protein C-terminal helicase 1 ISO (MGI:5700253|PMID:26490168) MGI PMID:26490168 MGI:5700253 NCBI chr17:55,786,568...55,973,366
Ensembl chr17:60,901,073...61,083,462
JBrowse link
G CAPZA3 capping actin protein of muscle Z-line subunit alpha 3 ISO (MGI:3848085|PMID:19341723) RGD
MGI
PMID:9406198, PMID:19341723 MGI:3848085, RGD:69796 NCBI chr12:18,733,149...18,734,224
Ensembl chr12:19,119,771...19,120,670
JBrowse link
G CCDC42 coiled-coil domain containing 42 ISO (MGI:5774582|PMID:26945718) UniProt PMID:26945718 MGI:5774582 NCBI chr17:42,908,881...42,924,815
Ensembl chr17:47,642,537...47,660,983
JBrowse link
G CCDC63 coiled-coil domain containing 63 ISO (MGI:5770027|PMID:26501274) UniProt PMID:26501274 MGI:5770027 NCBI chr12:108,417,758...108,477,163
Ensembl chr12:111,816,429...111,870,006
JBrowse link
G CCNB1IP1 cyclin B1 interacting protein 1 ISO (MGI:3757893|PMID:17784788) MGI PMID:17784788 MGI:3757893 NCBI chr14:1,182,025...1,205,471
Ensembl chr14:19,235,987...19,258,663
JBrowse link
G CDYL chromodomain Y like ISO (MGI:6103059|PMID:28803779) UniProt PMID:28803779 MGI:6103059 NCBI chr 6:4,607,088...4,790,742
Ensembl chr 6:4,737,306...4,976,777
JBrowse link
G CELF1 CUGBP Elav-like family member 1 ISO (MGI:3699063|PMID:17130239) MGI PMID:17130239 MGI:3699063 NCBI chr11:47,415,600...47,515,254
Ensembl chr11:47,967,831...48,008,487
JBrowse link
G CEP131 centrosomal protein 131 ISO (MGI:5647985|PMID:24415959)
(MGI:77572|PMID:8529672)
MGI PMID:8529672, PMID:24415959 MGI:5647985, MGI:77572 NCBI chr17:75,614,593...75,648,730
Ensembl chr17:81,343,396...81,376,891
JBrowse link
G CEP57 centrosomal protein 57 ISO (PMID:12954732) HGNC PMID:12954732 NCBI chr11:90,795,277...90,838,166 JBrowse link
G CIB1 calcium and integrin binding 1 ISO (MGI:3689659|PMID:16982698) UniProt PMID:16982698 MGI:3689659 NCBI chr15:68,919,377...68,923,213 JBrowse link
G DDIAS DNA damage induced apoptosis suppressor ISO (MGI:3718924|PMID:17515607) MGI PMID:17515607 MGI:3718924 NCBI chr11:77,967,057...77,999,829
Ensembl chr11:81,579,505...81,635,075
JBrowse link
G DDX25 DEAD-box helicase 25 ISO (MGI:3040720|PMID:15096601) UniProt PMID:15096601 MGI:3040720 NCBI chr11:120,718,758...120,738,527
Ensembl chr11:124,632,841...124,667,585
JBrowse link
G DHH desert hedgehog signaling molecule ISO (MGI:3769860|PMID:17495005) MGI PMID:17495005 MGI:3769860 NCBI chr12:39,656,046...39,661,439
Ensembl chr12:40,535,740...40,541,123
JBrowse link
G DMC1 DNA meiotic recombinase 1 ISO (MGI:3719060|PMID:17696610) MGI PMID:17696610 MGI:3719060 NCBI chr22:19,433,989...19,485,804
Ensembl chr22:37,253,609...37,305,769
JBrowse link
G DPY19L2 dpy-19 like 2 ISO (PMID:21397063), (PMID:21397064)
(MGI:5437568|PMID:22764053)
UniProtKB
MGI
PMID:21397063, PMID:21397064, PMID:22764053 MGI:5437568 NCBI chr12:25,275,612...25,379,087 JBrowse link
G DYNC1H1 dynein cytoplasmic 1 heavy chain 1 ISO RGD PMID:8006076 RGD:13207350 NCBI chr14:82,584,876...82,670,750
Ensembl chr14:102,406,993...102,489,475
JBrowse link
G DYNLL1 dynein light chain LC8-type 1 ISO RGD PMID:15983119 RGD:13208521 NCBI chr12:118,078,401...118,080,822 JBrowse link
G EHMT2 euchromatic histone lysine methyltransferase 2 ISO (MGI:3717933|PMID:17599069) MGI PMID:17599069 MGI:3717933 NCBI chr 6:31,542,946...31,560,894
Ensembl chr 6:32,429,271...32,451,844
JBrowse link
G FANCG FA complementation group G ISO (MGI:2159044|PMID:11823446) MGI PMID:11823446 MGI:2159044 NCBI chr 9:34,924,399...34,931,077
Ensembl chr 9:35,730,176...35,736,648
JBrowse link
G FNDC3A fibronectin type III domain containing 3A ISO (MGI:50496|PMID:1759682), (MGI:59059|PMID:2164218)
(MGI:3702805|PMID:16904100)
MGI PMID:1759682, PMID:2164218, PMID:16904100 MGI:3702805, MGI:50496, MGI:59059 NCBI chr13:30,119,740...30,347,544
Ensembl chr13:48,820,018...49,049,274
JBrowse link
G FSHR follicle stimulating hormone receptor ISO (MGI:2137997|PMID:11466221), (MGI:3797480|PMID:15973687) MGI PMID:11466221, PMID:15973687 MGI:2137997, MGI:3797480 NCBI chr2A:49,088,450...49,287,688
Ensembl chr2A:50,008,328...50,207,258
JBrowse link
G GALNTL5 polypeptide N-acetylgalactosaminyltransferase like 5 ISO (PMID:24398516)
(MGI:5550318|PMID:24398516)
UniProtKB
UniProt
PMID:24398516 MGI:5550318 NCBI chr 7:143,546,728...143,599,258
Ensembl chr 7:155,700,379...155,746,025
JBrowse link
G GAPDHS glyceraldehyde-3-phosphate dehydrogenase, spermatogenic ISO RGD PMID:17375205 RGD:2301985 NCBI chr19:32,479,559...32,491,959
Ensembl chr19:41,216,758...41,228,750
JBrowse link
G HOOK1 hook microtubule tethering protein 1 ISO (MGI:2180892|PMID:12075009) MGI PMID:12075009 MGI:2180892 NCBI chr 1:59,072,565...59,134,191
Ensembl chr 1:60,777,769...60,839,384
JBrowse link
G HSPA2 heat shock protein family A (Hsp70) member 2 ISO (MGI:82564|PMID:8622925) MGI PMID:8622925 MGI:82564 NCBI chr14:45,124,326...45,127,105
Ensembl chr14:63,373,840...63,375,762
JBrowse link
G ICA1L islet cell autoantigen 1 like ISO (MGI:5787757|PMID:26306493) MGI PMID:26306493 MGI:5787757 NCBI chr2B:90,034,205...90,105,600
Ensembl chr2B:208,184,023...208,251,254
JBrowse link
G ING2 inhibitor of growth family member 2 ISO (MGI:4867787|PMID:21124965) BHF-UCL PMID:21124965 MGI:4867787 NCBI chr 4:175,683,040...175,689,646
Ensembl chr 4:187,909,495...187,915,674
JBrowse link
G INSL6 insulin like 6 ISO (MGI:4430687|PMID:19520787) MGI PMID:19520787 MGI:4430687 NCBI chr 9:5,007,158...5,029,056
Ensembl chr 9:5,192,023...5,213,827
JBrowse link
G IQCG IQ motif containing G ISO (MGI:5608638|PMID:24849454)
(MGI:5617699|PMID:24362311)
UniProt
MGI
PMID:24362311, PMID:24849454 MGI:5608638, MGI:5617699 NCBI chr 3:195,316,220...195,396,328
Ensembl chr 3:205,185,927...205,268,692
JBrowse link
G JAM2 junctional adhesion molecule 2 ISO (MGI:3054279|PMID:15372036) UniProt PMID:15372036 MGI:3054279 NCBI chr21:12,084,083...12,162,615
Ensembl chr21:25,441,765...25,519,304
JBrowse link
G JAM3 junctional adhesion molecule 3 ISO (MGI:3054279|PMID:15372036) MGI PMID:15372036 MGI:3054279 NCBI chr11:128,916,024...129,006,497
Ensembl chr11:132,783,580...132,864,657
JBrowse link
G KIT KIT proto-oncogene, receptor tyrosine kinase ISO (MGI:3797995|PMID:18308723) MGI PMID:18308723 MGI:3797995 NCBI chr 4:69,199,543...69,282,323
Ensembl chr 4:75,761,946...75,844,473
JBrowse link
G KLHL10 kelch like family member 10 ISO (MGI:3040865|PMID:15136734) MGI PMID:15136734 MGI:3040865 NCBI chr17:15,465,507...15,478,190
Ensembl chr17:15,684,157...15,696,563
JBrowse link
G LOC100988671 histone H3.3A ISO (MGI:5661094|PMID:25675407) MGI PMID:25675407 MGI:5661094 NCBI chr17:69,728,165...69,730,519
Ensembl chr17:75,277,614...75,281,106
JBrowse link
G MEI1 meiotic double-stranded break formation protein 1 ISO (MGI:3719060|PMID:17696610) MGI PMID:17696610 MGI:3719060 NCBI chr22:22,592,508...22,692,370
Ensembl chr22:40,678,001...40,777,076
JBrowse link
G MEIOC meiosis specific with coiled-coil domain ISO (MGI:5905073|PMID:28380054) UniProt PMID:28380054 MGI:5905073 NCBI chr17:12,725,114...12,744,974
Ensembl chr17:12,901,882...12,920,285
JBrowse link
G MFSD14A major facilitator superfamily domain containing 14A ISO (MGI:5763056|PMID:27107036) MGI PMID:27107036 MGI:5763056 NCBI chr 1:102,696,558...102,741,630 JBrowse link
G MKKS McKusick-Kaufman syndrome ISO (MGI:3581923|PMID:15772095) MGI PMID:15772095 MGI:3581923 NCBI chr20:10,346,252...10,380,180
Ensembl chr20:10,351,309...10,366,863
JBrowse link
G NECTIN2 nectin cell adhesion molecule 2 ISO (MGI:1354802|PMID:10733589) MGI PMID:10733589 MGI:1354802 NCBI chr19:41,794,037...41,837,047
Ensembl chr19:50,399,668...50,443,024
JBrowse link
G NME5 NME/NM23 family member 5 ISO (MGI:2664629|PMID:12788088)
(MGI:5429171|PMID:21746835)
(MGI:3843123|PMID:19303412)
UniProt
MGI
PMID:12788088, PMID:19303412, PMID:21746835 MGI:2664629, MGI:3843123, MGI:5429171 NCBI chr 5:133,493,930...133,517,906
Ensembl chr 5:139,628,678...139,651,372
JBrowse link
G NSUN2 NOP2/Sun RNA methyltransferase 2 ISO (MGI:5525987|PMID:23401851) CACAO PMID:23401851 MGI:5525987 NCBI chr 5:6,921,073...6,953,622
Ensembl chr 5:6,596,414...6,629,121
JBrowse link
G NUP210L nucleoporin 210 like ISO (MGI:4949532|PMID:20034429) MGI PMID:20034429 MGI:4949532 NCBI chr 1:129,349,468...129,510,688
Ensembl chr 1:132,977,876...133,125,344
JBrowse link
G OCA2 OCA2 melanosomal transmembrane protein ISO (MGI:3040715|PMID:7317942) MGI PMID:7317942 MGI:3040715 NCBI chr15:1,811,728...2,192,018
Ensembl chr15:25,181,386...25,523,774
JBrowse link
G ODF2 outer dense fiber of sperm tails 2 ISO RGD PMID:9698445 RGD:69913 NCBI chr 9:99,577,891...99,623,581
Ensembl chr 9:128,245,049...128,291,202
JBrowse link
G OSBP2 oxysterol binding protein 2 ISO (MGI:5606144|PMID:24245814) MGI PMID:24245814 MGI:5606144 NCBI chr22:11,719,017...11,933,841
Ensembl chr22:29,520,479...29,733,061
JBrowse link
G PACRG parkin coregulated ISO (MGI:3044442|PMID:15148410) MGI PMID:15148410 MGI:3044442 NCBI chr 6:160,677,517...161,261,350
Ensembl chr 6:165,679,339...166,258,025
JBrowse link
G PANK2 pantothenate kinase 2 ISO (MGI:3513946|PMID:15525657) MGI PMID:15525657 MGI:3513946 NCBI chr20:3,924,054...3,959,393
Ensembl chr20:3,723,211...3,757,748
JBrowse link
G PDILT protein disulfide isomerase like, testis expressed ISO (MGI:5314820|PMID:22357757) MGI PMID:22357757 MGI:5314820 NCBI chr16:17,908,332...17,953,992
Ensembl chr16:20,455,557...20,495,734
JBrowse link
G PEBP1 phosphatidylethanolamine binding protein 1 ISO RGD PMID:9508097 RGD:1357207 NCBI chr12:115,716,953...115,726,412
Ensembl chr12:119,093,952...119,105,054
JBrowse link
G PITHD1 PITH domain containing 1 ISO (MGI:6392185|PMID:31915251) MGI PMID:31915251 MGI:6392185 NCBI chr 1:22,970,081...22,979,841
Ensembl chr 1:23,954,980...23,964,085
JBrowse link
G PIWIL1 piwi like RNA-mediated gene silencing 1 ISO (PMID:28552346)
(MGI:2180905|PMID:12062093), (MGI:5905675|PMID:28552346)
UniProtKB
UniProt
PMID:12062093, PMID:28552346 MGI:2180905, MGI:5905675 NCBI chr12:127,951,178...127,986,173
Ensembl chr12:132,169,820...132,199,374
JBrowse link
G PLD6 phospholipase D family member 6 ISO (MGI:4943609|PMID:21397848), (MGI:4943610|PMID:21397847) UniProt PMID:21397847, PMID:21397848 MGI:4943609, MGI:4943610 NCBI chr17:34,084,634...34,091,470
Ensembl chr17:39,016,859...39,023,398
JBrowse link
G PPP2R2B protein phosphatase 2 regulatory subunit Bbeta ISO RGD PMID:8389301 RGD:633587 NCBI chr 5:142,037,831...142,521,655
Ensembl chr 5:148,050,581...148,533,329
JBrowse link
G PRKG1 protein kinase cGMP-dependent 1 ISO RGD PMID:15713832 RGD:1599621 NCBI chr10:47,642,312...48,935,188
Ensembl chr10:49,779,211...51,064,882
JBrowse link
G PRM1 protamine 1 ISO (MGI:1934083|PMID:11326282) MGI PMID:11326282 MGI:1934083 NCBI chr16:10,222,779...10,223,289 JBrowse link
G PRM2 protamine 2 ISO (MGI:1934083|PMID:11326282) MGI PMID:11326282 MGI:1934083 NCBI chr16:10,217,586...10,218,446
Ensembl chr16:11,439,417...11,440,265
JBrowse link
G PYGO1 pygopus family PHD finger 1 ISO (MGI:5498404|PMID:23637336) MGI PMID:23637336 MGI:5498404 NCBI chr15:34,509,787...34,556,686
Ensembl chr15:52,838,651...52,879,630
JBrowse link
G PYGO2 pygopus family PHD finger 2 ISO (MGI:5498404|PMID:23637336) MGI PMID:23637336 MGI:5498404 NCBI chr 1:130,305,547...130,310,270
Ensembl chr 1:133,912,411...133,920,308
JBrowse link
G QKI QKI, KH domain containing RNA binding ISO (MGI:3044442|PMID:15148410) MGI PMID:15148410 MGI:3044442 NCBI chr 6:161,361,413...161,523,414 JBrowse link
G RAN RAN, member RAS oncogene family ISO RGD PMID:12211070 RGD:727421 NCBI chr12:128,497,407...128,503,049
Ensembl chr12:132,694,498...132,699,668
JBrowse link
G REC8 REC8 meiotic recombination protein ISO (MGI:3719060|PMID:17696610) MGI PMID:17696610 MGI:3719060 NCBI chr14:4,948,100...4,956,492
Ensembl chr14:23,071,724...23,079,948
JBrowse link
G RFX2 regulatory factor X2 ISO (MGI:5699785|PMID:26248850), (MGI:5708804|PMID:26162102), (MGI:5763317|PMID:26853561) UniProt PMID:26162102, PMID:26248850, PMID:26853561 MGI:5699785, MGI:5708804, MGI:5763317 NCBI chr19:5,013,823...5,132,451
Ensembl chr19:5,942,100...5,996,094
JBrowse link
G RIMBP3C RIMS binding protein 3C ISO (MGI:3830438|PMID:19091768) ParkinsonsUK-UCL PMID:19091768 MGI:3830438 NCBI chr22:3,668,133...3,673,619 JBrowse link
G RNF17 ring finger protein 17 ISO (MGI:3604923|PMID:16093322) MGI PMID:16093322 MGI:3604923 NCBI chr13:6,056,496...6,172,231
Ensembl chr13:24,346,898...24,460,945
JBrowse link
G RNF8 ring finger protein 8 ISO (MGI:4441228|PMID:20153262) UniProt PMID:20153262 MGI:4441228 NCBI chr 6:36,918,705...36,955,380
Ensembl chr 6:38,108,414...38,145,949
JBrowse link
G RSPH1 radial spoke head component 1 ISO (MGI:3804335|PMID:18453535) MGI PMID:18453535 MGI:3804335 NCBI chr21:28,779,994...28,804,130
Ensembl chr21:42,098,212...42,121,610
JBrowse link
G SBF1 SET binding factor 1 ISO RGD PMID:27335132 RGD:38549340 NCBI chr22:30,691,976...30,723,128
Ensembl chr22:49,676,467...49,704,633
JBrowse link
G SEC23IP SEC23 interacting protein ISO (MGI:5052222|PMID:21640725) MGI PMID:21640725 MGI:5052222 NCBI chr10:116,460,187...116,510,830
Ensembl chr10:119,876,408...119,928,064
JBrowse link
G SEPTIN4 septin 4 ISO (MGI:3531234|PMID:15737931) MGI PMID:15737931 MGI:3531234 NCBI chr17:52,595,185...52,607,020 JBrowse link
G SIX5 SIX homeobox 5 ISO (MGI:3046123|PMID:15163633) MGI PMID:15163633 MGI:3046123 NCBI chr19:42,774,240...42,779,026 JBrowse link
G SLIRP SRA stem-loop interacting RNA binding protein ISO (MGI:5532585|PMID:23976951) MGI PMID:23976951 MGI:5532585 NCBI chr14:58,262,126...58,271,829 JBrowse link
G SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 ISO RGD PMID:22215678 RGD:9586361 NCBI chr 9:1,818,004...1,997,652
Ensembl chr 9:2,013,237...2,189,409
JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 ISO RGD PMID:22215678 RGD:9586361 NCBI chr19:10,515,216...10,616,155
Ensembl chr19:11,250,006...11,334,952
JBrowse link
G SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 ISO RGD PMID:22215678 RGD:9586361 NCBI chr17:16,633,982...16,660,502
Ensembl chr17:16,860,400...16,884,946
JBrowse link
G SOX30 SRY-box transcription factor 30 ISO (MGI:6191808|PMID:29848638) UniProt PMID:29848638 MGI:6191808 NCBI chr 5:153,022,109...153,067,734
Ensembl chr 5:159,640,126...159,737,776
JBrowse link
G SPINK2 serine peptidase inhibitor Kazal type 2 ISO (PMID:28554943)
(MGI:5287926|PMID:21705336)
(MGI:6114299|PMID:28554943)
UniProt
MGI
PMID:21705336, PMID:28554943 MGI:5287926, MGI:6114299 NCBI chr 4:67,101,686...67,113,671 JBrowse link
G SPO11 SPO11 initiator of meiotic double stranded breaks ISO (MGI:3719060|PMID:17696610) MGI PMID:17696610 MGI:3719060 NCBI chr20:53,669,128...53,684,328
Ensembl chr20:54,948,661...54,963,384
JBrowse link
G STK11 serine/threonine kinase 11 ISO (MGI:3829517|PMID:18774945) UniProt PMID:18774945 MGI:3829517 Ensembl chr19:1,188,537...1,210,677 JBrowse link
G STRBP spermatid perinuclear RNA binding protein ISO (MGI:1934697|PMID:11336498) MGI PMID:11336498 MGI:1934697 NCBI chr 9:94,249,017...94,395,796
Ensembl chr 9:122,586,575...122,640,167
JBrowse link
G SUN5 Sad1 and UNC84 domain containing 5 ISO (MGI:5916674|PMID:28945193) UniProt PMID:28945193 MGI:5916674 NCBI chr20:29,269,845...29,290,474
Ensembl chr20:30,388,096...30,408,883
JBrowse link
G TAF7L TATA-box binding protein associated factor 7 like ISO (MGI:3709925|PMID:17242199) MGI PMID:17242199 MGI:3709925 NCBI chr  X:90,471,354...90,496,618
Ensembl chr  X:100,607,488...100,631,301
JBrowse link
G TARBP2 TARBP2 subunit of RISC loading complex ISO (MGI:1338603|PMID:10369260) MGI PMID:10369260 MGI:1338603 NCBI chr12:35,246,937...35,253,378
Ensembl chr12:36,031,818...36,038,008
JBrowse link
G TDRD5 tudor domain containing 5 ISO (MGI:4946318|PMID:21383078) UniProt PMID:21383078 MGI:4946318 NCBI chr 1:155,080,083...155,171,734
Ensembl chr 1:158,761,013...158,852,660
JBrowse link
G TMF1 TATA element modulatory factor 1 ISO (MGI:4849617|PMID:20691678)
(MGI:5469555|PMID:23000399)
MGI PMID:20691678, PMID:23000399 MGI:4849617, MGI:5469555 NCBI chr 3:68,955,866...68,988,353
Ensembl chr 3:70,322,814...70,355,460
JBrowse link
G TNK2 tyrosine kinase non receptor 2 ISO (MGI:6246359|PMID:23562806) UniProt PMID:23562806 MGI:6246359 NCBI chr 3:193,254,017...193,302,863 JBrowse link
G TNP1 transition protein 1 ISO (PMID:12743712) UniProtKB PMID:12743712 NCBI chr2B:104,122,748...104,123,349
Ensembl chr2B:222,723,606...222,724,212
JBrowse link
G TOPAZ1 testis and ovary specific PAZ domain containing 1 ISO (MGI:5697228|PMID:26358182) MGI PMID:26358182 MGI:5697228 NCBI chr 3:44,131,729...44,221,846
Ensembl chr 3:45,190,960...45,280,601
JBrowse link
G TSSK1B testis specific serine kinase 1B ISO (MGI:3801547|PMID:18533145) UniProt PMID:18533145 MGI:3801547 NCBI chr 5:108,790,115...108,794,426 JBrowse link
G TSSK2 testis specific serine kinase 2 ISO (MGI:3801547|PMID:18533145) UniProt PMID:18533145 MGI:3801547 NCBI chr22:1,885,099...1,887,139
Ensembl chr22:17,563,492...17,564,568
JBrowse link
G TSSK4 testis specific serine kinase 4 ISO (MGI:6189623|PMID:17927909) UniProt PMID:17927909 MGI:6189623 NCBI chr14:4,980,178...4,984,291
Ensembl chr14:23,104,197...23,108,037
JBrowse link
G TTC21A tetratricopeptide repeat domain 21A ISO (PMID:30929735)
(MGI:6368051|PMID:30929735)
UniProt PMID:30929735 MGI:6368051 NCBI chr 3:39,003,730...39,035,183
Ensembl chr 3:39,284,480...39,315,375
JBrowse link
G TTC26 tetratricopeptide repeat domain 26 ISO (MGI:3040715|PMID:7317942) MGI PMID:7317942 MGI:3040715 NCBI chr 7:131,092,241...131,150,109
Ensembl chr 7:143,579,500...143,636,362
JBrowse link
G UBE2J1 ubiquitin conjugating enzyme E2 J1 ISO (MGI:5617122|PMID:25320092) MGI PMID:25320092 MGI:5617122 NCBI chr 6:87,196,938...87,223,414
Ensembl chr 6:90,471,136...90,497,334
JBrowse link
G YBX2 Y-box binding protein 2 ISO (MGI:3576442|PMID:15824319), (MGI:3696301|PMID:17035640) MGI PMID:15824319, PMID:17035640 MGI:3576442, MGI:3696301 NCBI chr17:7,319,186...7,325,594
Ensembl chr17:7,306,548...7,312,632
JBrowse link
G YTHDC2 YTH domain containing 2 ISO (MGI:5911610|PMID:29033321), (MGI:6109052|PMID:29087293), (MGI:6113138|PMID:29360036) UniProt PMID:29033321, PMID:29087293, PMID:29360036 MGI:5911610, MGI:6109052, MGI:6113138 NCBI chr 5:108,870,417...108,951,848
Ensembl chr 5:114,672,839...114,754,153
JBrowse link
G ZFP42 ZFP42 zinc finger protein ISO (MGI:5285464|PMID:21641340) MGI PMID:21641340 MGI:5285464 NCBI chr 4:180,152,673...180,162,899
Ensembl chr 4:192,349,144...192,350,076
JBrowse link
G ZMYND15 zinc finger MYND-type containing 15 ISO (MGI:4849621|PMID:20675388) MGI PMID:20675388 MGI:4849621 NCBI chr17:4,795,541...4,801,947
Ensembl chr17:4,786,214...4,791,760
JBrowse link
acrosome assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACRBP acrosin binding protein ISO (MGI:5789676|PMID:27303034) UniProt PMID:27303034 MGI:5789676 NCBI chr12:6,768,971...6,778,613
Ensembl chr12:6,685,963...6,695,344
JBrowse link
G AGFG1 ArfGAP with FG repeats 1 ISO (MGI:2153561|PMID:11711676), (MGI:3040020|PMID:14724135) MGI PMID:11711676, PMID:14724135 MGI:2153561, MGI:3040020 NCBI chr2B:114,711,697...114,800,680
Ensembl chr2B:233,542,185...233,604,897
JBrowse link
G CCDC136 coiled-coil domain containing 136 ISO (MGI:5816406|PMID:27076447) UniProt PMID:27076447 MGI:5816406 NCBI chr 7:120,743,177...120,774,401
Ensembl chr 7:133,267,217...133,298,936
JBrowse link
G CHN2 chimerin 2 ISO RGD PMID:8440677 RGD:724725 NCBI chr 7:29,840,194...30,157,363 JBrowse link
G FABP9 fatty acid binding protein 9 ISO RGD PMID:7958448 RGD:634410 NCBI chr 8:77,981,007...77,984,333
Ensembl chr 8:79,604,583...79,607,728
JBrowse link
G KIAA0319L KIAA0319 like ISO (MGI:6198830|PMID:29991750) MGI PMID:29991750 MGI:6198830 NCBI chr 1:34,701,571...34,825,628
Ensembl chr 1:35,879,029...36,002,516
JBrowse link
G MFSD14A major facilitator superfamily domain containing 14A ISO (MGI:5763056|PMID:27107036) MGI PMID:27107036 MGI:5763056 NCBI chr 1:102,696,558...102,741,630 JBrowse link
G NECTIN2 nectin cell adhesion molecule 2 ISO (MGI:1354802|PMID:10733589) MGI PMID:10733589 MGI:1354802 NCBI chr19:41,794,037...41,837,047
Ensembl chr19:50,399,668...50,443,024
JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 ISO (MGI:2681371|PMID:13129914) MGI PMID:13129914 MGI:2681371 NCBI chr17:2,584,349...2,676,928
Ensembl chr17:2,590,007...2,680,994
JBrowse link
G PLA2G3 phospholipase A2 group III ISO (MGI:4459354|PMID:20424323) MGI PMID:20424323 MGI:4459354 NCBI chr22:12,158,589...12,164,441
Ensembl chr22:29,995,364...30,001,160
JBrowse link
G RFX2 regulatory factor X2 ISO (MGI:5708804|PMID:26162102) UniProt PMID:26162102 MGI:5708804 NCBI chr19:5,013,823...5,132,451
Ensembl chr19:5,942,100...5,996,094
JBrowse link
G SEC23IP SEC23 interacting protein ISO (MGI:5052222|PMID:21640725) MGI PMID:21640725 MGI:5052222 NCBI chr10:116,460,187...116,510,830
Ensembl chr10:119,876,408...119,928,064
JBrowse link
G SPACA1 sperm acrosome associated 1 ISO (MGI:5437786|PMID:22949614) MGI PMID:22949614 MGI:5437786 NCBI chr 6:85,925,861...85,944,492
Ensembl chr 6:89,198,031...89,216,671
JBrowse link
G SPINK2 serine peptidase inhibitor Kazal type 2 ISO (MGI:6114299|PMID:28554943) UniProt PMID:28554943 MGI:6114299 NCBI chr 4:67,101,686...67,113,671 JBrowse link
G TBC1D20 TBC1 domain family member 20 ISO (MGI:5551670|PMID:24239381) MGI PMID:24239381 MGI:5551670 NCBI chr20:644,646...670,860
Ensembl chr20:414,066...431,032
JBrowse link
G TBPL1 TATA-box binding protein like 1 ISO (MGI:2159505|PMID:11861477) MGI PMID:11861477 MGI:2159505 NCBI chr 6:131,719,606...131,754,960
Ensembl chr 6:135,817,613...135,852,876
JBrowse link
G TMF1 TATA element modulatory factor 1 ISO (MGI:4849617|PMID:20691678) MGI PMID:20691678 MGI:4849617 NCBI chr 3:68,955,866...68,988,353
Ensembl chr 3:70,322,814...70,355,460
JBrowse link
G TXNDC8 thioredoxin domain containing 8 ISO RGD PMID:15181017 RGD:1303999 NCBI chr 9:81,458,398...81,492,855
Ensembl chr 9:109,624,698...109,658,849
JBrowse link
G ZPBP zona pellucida binding protein ISO (MGI:3761850|PMID:17664285) MGI PMID:17664285 MGI:3761850 NCBI chr 7:50,576,485...50,735,411
Ensembl chr 7:50,826,058...50,981,644
JBrowse link
G ZPBP2 zona pellucida binding protein 2 ISO (MGI:3761850|PMID:17664285) MGI PMID:17664285 MGI:3761850 NCBI chr17:17,410,278...17,420,458
Ensembl chr17:17,630,126...17,639,771
JBrowse link
intramanchette transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEP131 centrosomal protein 131 ISO (MGI:5647985|PMID:24415959) MGI PMID:24415959 MGI:5647985 NCBI chr17:75,614,593...75,648,730
Ensembl chr17:81,343,396...81,376,891
JBrowse link
manchette assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEP131 centrosomal protein 131 ISO (MGI:5647985|PMID:24415959) MGI PMID:24415959 MGI:5647985 NCBI chr17:75,614,593...75,648,730
Ensembl chr17:81,343,396...81,376,891
JBrowse link
G HOOK1 hook microtubule tethering protein 1 ISO (MGI:3040520|PMID:9674995), (MGI:3624076|PMID:16540102) MGI PMID:9674995, PMID:16540102 MGI:3040520, MGI:3624076 NCBI chr 1:59,072,565...59,134,191
Ensembl chr 1:60,777,769...60,839,384
JBrowse link
G MEIG1 meiosis/spermiogenesis associated 1 ISO (MGI:5475083|PMID:23258628) MGI PMID:23258628 MGI:5475083 NCBI chr10:14,957,096...14,975,737 JBrowse link
G TTC26 tetratricopeptide repeat domain 26 ISO (MGI:3040520|PMID:9674995) MGI PMID:9674995 MGI:3040520 NCBI chr 7:131,092,241...131,150,109
Ensembl chr 7:143,579,500...143,636,362
JBrowse link
manchette disassembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RSPH6A radial spoke head 6 homolog A ISO (MGI:6203178|PMID:30185526) UniProt PMID:30185526 MGI:6203178 NCBI chr19:42,805,151...42,824,725
Ensembl chr19:51,342,729...51,361,239
JBrowse link
negative regulation of sperm capacitation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAEP progestagen associated endometrial protein ISO (PMID:15883155) UniProtKB PMID:15883155 NCBI chr 9:106,669,550...106,681,918 JBrowse link
positive regulation of flagellated sperm motility involved in capacitation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCR6 C-C motif chemokine receptor 6 ISO (PMID:23765988)
(MGI:5784973|PMID:23765988)
UniProtKB
UniProt
PMID:23765988 MGI:5784973 NCBI chr 6:165,094,563...165,109,774
Ensembl chr 6:170,069,689...170,084,779
JBrowse link
G DEFB1 defensin beta 1 ISO (PMID:25122636) UniProtKB PMID:25122636 NCBI chr 8:403,268...410,712
Ensembl chr 8:6,874,235...6,881,631
JBrowse link
G IQCF1 IQ motif containing F1 ISO (MGI:5708001|PMID:25380116) UniProt PMID:25380116 MGI:5708001 NCBI chr 3:51,836,683...51,847,503
Ensembl chr 3:53,068,302...53,076,490
JBrowse link
G RNASE9 ribonuclease A family member 9 (inactive) ISO (MGI:5582126|PMID:24719258) MGI PMID:24719258 MGI:5582126 NCBI chr14:1,421,047...1,425,872
Ensembl chr14:19,478,278...19,480,838
JBrowse link
proacrosomal vesicle fusion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KIAA0319L KIAA0319 like ISO (MGI:6198830|PMID:29991750) MGI PMID:29991750 MGI:6198830 NCBI chr 1:34,701,571...34,825,628
Ensembl chr 1:35,879,029...36,002,516
JBrowse link
G SOX30 SRY-box transcription factor 30 ISO (MGI:6191912|PMID:29866902) UniProt PMID:29866902 MGI:6191912 NCBI chr 5:153,022,109...153,067,734
Ensembl chr 5:159,640,126...159,737,776
JBrowse link
regulation of sperm capacitation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TCP11 t-complex 11 ISO (MGI:1097498|PMID:9322250), (MGI:5816449|PMID:9820206) UniProt PMID:9322250, PMID:9820206 MGI:1097498, MGI:5816449 NCBI chr 6:34,680,570...34,703,230
Ensembl chr 6:35,776,684...35,799,480
JBrowse link
sperm axoneme assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARMC2 armadillo repeat containing 2 ISO (PMID:30686508)
(MGI:6368074|PMID:30686508)
UniProt PMID:30686508 MGI:6368074 NCBI chr 6:106,650,907...106,777,544
Ensembl chr 6:110,701,552...110,826,937
JBrowse link
G BBS2 Bardet-Biedl syndrome 2 ISO (MGI:3512844|PMID:15539463) MGI PMID:15539463 MGI:3512844 NCBI chr16:36,756,699...36,807,652
Ensembl chr16:55,902,945...55,940,053
JBrowse link
G CEP131 centrosomal protein 131 ISO (MGI:5647985|PMID:24415959) MGI PMID:24415959 MGI:5647985 NCBI chr17:75,614,593...75,648,730
Ensembl chr17:81,343,396...81,376,891
JBrowse link
G CFAP157 cilia and flagella associated protein 157 ISO (MGI:5812811|PMID:27965440) UniProt PMID:27965440 MGI:5812811 NCBI chr 9:98,825,719...98,834,780
Ensembl chr 9:127,497,791...127,506,177
JBrowse link
G CFAP206 cilia and flagella associated protein 206 ISO (MGI:6452763|PMID:32376681) UniProt PMID:32376681 MGI:6452763 NCBI chr 6:85,252,905...85,341,418 JBrowse link
G CFAP43 cilia and flagella associated protein 43 ISO (PMID:29449551)
(MGI:6402702|PMID:31884020)
(MGI:6164072|PMID:29522859)
(MGI:6119337|PMID:29449551), (MGI:6140851|PMID:28552195)
UniProt
MGI
PMID:28552195, PMID:29449551, PMID:29522859, PMID:31884020 MGI:6119337, MGI:6140851, MGI:6164072, MGI:6402702 NCBI chr10:100,729,982...100,831,694
Ensembl chr10:104,188,653...104,290,557
JBrowse link
G CFAP44 cilia and flagella associated protein 44 ISO (PMID:29449551)
(MGI:6164072|PMID:29522859)
(MGI:6119337|PMID:29449551), (MGI:6140851|PMID:28552195)
UniProt
MGI
PMID:28552195, PMID:29449551, PMID:29522859 MGI:6119337, MGI:6140851, MGI:6164072 NCBI chr 3:110,432,619...110,587,517
Ensembl chr 3:117,355,403...117,510,045
JBrowse link
G CFAP65 cilia and flagella associated protein 65 ISO (MGI:6393461|PMID:31571197) UniProt PMID:31571197 MGI:6393461 NCBI chr2B:106,260,872...106,299,594
Ensembl chr2B:224,854,262...224,892,490
JBrowse link
G CFAP69 cilia and flagella associated protein 69 ISO (PMID:30415212)
(MGI:6431182|PMID:30415212)
MGI PMID:30415212 MGI:6431182 NCBI chr 7:82,254,266...82,353,873
Ensembl chr 7:95,856,393...95,922,012
JBrowse link
G CFAP97D1 CFAP97 domain containing 1 ISO (MGI:6452255|PMID:32785227) UniProt PMID:32785227 MGI:6452255 NCBI chr17:13,612,308...13,618,791
Ensembl chr17:13,779,785...13,783,284
JBrowse link
G DNAH1 dynein axonemal heavy chain 1 ISO (PMID:24360805) UniProtKB PMID:24360805 NCBI chr 3:52,233,271...52,342,627
Ensembl chr 3:53,491,822...53,572,393
JBrowse link
G FSIP2 fibrous sheath interacting protein 2 ISO (PMID:30137358), (PMID:30745215) UniProt PMID:30137358, PMID:30745215 NCBI chr2B:73,019,091...73,112,974
Ensembl chr2B:190,864,813...190,915,369
JBrowse link
G IFT88 intraflagellar transport 88 ISO (MGI:4939808|PMID:21337470) MGI PMID:21337470 MGI:4939808 NCBI chr13:1,893,102...2,017,771
Ensembl chr13:20,206,471...20,331,204
JBrowse link
G IQCG IQ motif containing G ISO (MGI:5608638|PMID:24849454) UniProt PMID:24849454 MGI:5608638 NCBI chr 3:195,316,220...195,396,328
Ensembl chr 3:205,185,927...205,268,692
JBrowse link
G MEIG1 meiosis/spermiogenesis associated 1 ISO (MGI:5475083|PMID:23258628) MGI PMID:23258628 MGI:5475083 NCBI chr10:14,957,096...14,975,737 JBrowse link
G NEURL1 neuralized E3 ubiquitin protein ligase 1 ISO (MGI:2151733|PMID:11585928) MGI PMID:11585928 MGI:2151733 NCBI chr10:100,093,614...100,192,485 JBrowse link
G PLA2G3 phospholipase A2 group III ISO (MGI:4459354|PMID:20424323) MGI PMID:20424323 MGI:4459354 NCBI chr22:12,158,589...12,164,441
Ensembl chr22:29,995,364...30,001,160
JBrowse link
G SPAG16 sperm associated antigen 16 ISO (MGI:3052627|PMID:15328412) MGI PMID:15328412 MGI:3052627 NCBI chr2B:100,539,441...101,666,204
Ensembl chr2B:219,014,837...220,139,314
JBrowse link
G SPEF2 sperm flagellar 2 ISO (PMID:31048344), (PMID:31151990)
(MGI:5292446|PMID:21715716)
UniProt
MGI
PMID:21715716, PMID:31048344, PMID:31151990 MGI:5292446 NCBI chr 5:74,554,017...74,751,921 JBrowse link
G TPGS1 tubulin polyglutamylase complex subunit 1 ISO (MGI:2387741|PMID:12242242) MGI PMID:12242242 MGI:2387741 NCBI chr19:614,279...625,715 JBrowse link
G TTC12 tetratricopeptide repeat domain 12 ISO (PMID:31978331) UniProt PMID:31978331 NCBI chr11:108,194,610...108,253,161
Ensembl chr11:112,037,620...112,106,537
JBrowse link
G TTLL1 tubulin tyrosine ligase like 1 ISO (MGI:4457964|PMID:20498047)
(MGI:5430875|PMID:20442420)
MGI PMID:20442420, PMID:20498047 MGI:4457964, MGI:5430875 NCBI chr22:23,924,628...23,973,282
Ensembl chr22:42,128,224...42,174,850
JBrowse link
G TTLL5 tubulin tyrosine ligase like 5 ISO (MGI:5498425|PMID:23558686) MGI PMID:23558686 MGI:5498425 NCBI chr14:56,216,214...56,513,718
Ensembl chr14:75,058,897...75,356,494
JBrowse link
G UBE2B ubiquitin conjugating enzyme E2 B ISO (MGI:2668287|PMID:12672659) MGI PMID:12672659 MGI:2668287 NCBI chr 5:129,775,011...129,794,853
Ensembl chr 5:135,925,217...135,944,609
JBrowse link
sperm capacitation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABHD2 abhydrolase domain containing 2, acylglycerol lipase ISO (PMID:26989199) UniProtKB PMID:26989199 NCBI chr15:67,780,453...67,891,454
Ensembl chr15:86,987,070...87,095,818
JBrowse link
G BSPH1 binder of sperm protein homolog 1 ISO (MGI:5465085|PMID:22539676) MGI PMID:22539676 MGI:5465085 NCBI chr19:44,907,826...44,933,116
Ensembl chr19:53,559,937...53,583,726
JBrowse link
G CATSPER3 cation channel sperm associated 3 ISO (MGI:3694233|PMID:17227845) MGI PMID:17227845 MGI:3694233 NCBI chr 5:130,362,139...130,406,888
Ensembl chr 5:136,503,846...136,548,162
JBrowse link
G CATSPER4 cation channel sperm associated 4 ISO (MGI:3694233|PMID:17227845) MGI PMID:17227845 MGI:3694233 NCBI chr 1:25,451,655...25,464,069
Ensembl chr 1:26,518,287...26,531,263
JBrowse link
G CATSPERD cation channel sperm associated auxiliary subunit delta ISO (MGI:5315675|PMID:21224844) UniProt PMID:21224844 MGI:5315675 NCBI chr19:4,736,106...4,792,440
Ensembl chr19:5,671,403...5,722,095
JBrowse link
G CATSPERZ catsper channel auxiliary subunit zeta ISO (MGI:5825443|PMID:28226241)
(MGI:6316499|PMID:31056283)
UniProt PMID:28226241, PMID:31056283 MGI:5825443, MGI:6316499 NCBI chr11:59,657,237...59,661,838
Ensembl chr11:63,001,836...63,006,546
JBrowse link
G CFTR CF transmembrane conductance regulator ISO (MGI:5429843|PMID:21976599) UniProt PMID:21976599 MGI:5429843 NCBI chr 7:109,449,847...109,633,023
Ensembl chr 7:122,129,798...122,327,864
JBrowse link
G DLD dihydrolipoamide dehydrogenase ISO (MGI:3589712|PMID:15888450) MGI PMID:15888450 MGI:3589712 NCBI chr 7:99,872,020...99,901,884
Ensembl chr 7:112,593,934...112,623,629
JBrowse link
G EFCAB9 EF-hand calcium binding domain 9 ISO (MGI:6316499|PMID:31056283) UniProt PMID:31056283 MGI:6316499 NCBI chr 5:167,545,205...167,554,563
Ensembl chr 5:174,461,056...174,470,489
JBrowse link
G LOC100986165 semenogelin 2 ISO (MGI:3709410|PMID:17123940) MGI PMID:17123940 MGI:3709410 NCBI chr20:41,552,614...41,554,605
Ensembl chr20:42,642,620...42,644,611
JBrowse link
G PEBP1 phosphatidylethanolamine binding protein 1 ISO (MGI:3603744|PMID:16183867) MGI PMID:16183867 MGI:3603744 NCBI chr12:115,716,953...115,726,412
Ensembl chr12:119,093,952...119,105,054
JBrowse link
G PRKACA protein kinase cAMP-activated catalytic subunit alpha ISO (MGI:4357734|PMID:19560455) UniProt PMID:19560455 MGI:4357734 NCBI chr19:13,657,344...13,683,864
Ensembl chr19:14,385,191...14,406,205
JBrowse link
G ROPN1 rhophilin associated tail protein 1 ISO (MGI:5551621|PMID:23303679) MGI PMID:23303679 MGI:5551621 NCBI chr 3:121,074,182...121,097,320
Ensembl chr 3:127,973,536...127,996,694
JBrowse link
G ROPN1L rhophilin associated tail protein 1 like ISO (MGI:5551621|PMID:23303679) MGI PMID:23303679 MGI:5551621 NCBI chr 5:10,757,032...10,795,787
Ensembl chr 5:10,614,565...10,635,705
JBrowse link
G SEPTIN4 septin 4 ISO (MGI:3531234|PMID:15737931) MGI PMID:15737931 MGI:3531234 NCBI chr17:52,595,185...52,607,020 JBrowse link
G SLC26A3 solute carrier family 26 member 3 ISO (MGI:5429843|PMID:21976599) UniProt PMID:21976599 MGI:5429843 NCBI chr 7:99,747,405...99,776,763
Ensembl chr 7:112,470,041...112,507,671
JBrowse link
G SLC26A6 solute carrier family 26 member 6 ISO (MGI:5429843|PMID:21976599) UniProt PMID:21976599 MGI:5429843 NCBI chr 3:48,547,277...48,557,099
Ensembl chr 3:49,629,237...49,639,039
JBrowse link
G SPINK1 serine peptidase inhibitor Kazal type 1 ISO (MGI:5428115|PMID:22228629) MGI PMID:22228629 MGI:5428115 NCBI chr 5:143,273,137...143,287,745 JBrowse link
sperm chromatin condensation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FSHR follicle stimulating hormone receptor ISO (MGI:1855818|PMID:10775161) MGI PMID:10775161 MGI:1855818 NCBI chr2A:49,088,450...49,287,688
Ensembl chr2A:50,008,328...50,207,258
JBrowse link
G LOC100987154 testis-specific H1 histone ISO (MGI:3531623|PMID:15710904) UniProt PMID:15710904 MGI:3531623 NCBI chr12:40,402,590...40,406,005
Ensembl chr12:41,281,177...41,281,944
JBrowse link
G SELENOF selenoprotein F ISO RGD PMID:11344099 RGD:728803 NCBI chr 1:119,382,707...119,432,277
Ensembl chr 1:88,234,383...88,282,944
JBrowse link
G SYCP1 synaptonemal complex protein 1 ISO (MGI:5315075|PMID:22164254) MGI PMID:22164254 MGI:5315075 NCBI chr 1:87,565,888...87,701,530
Ensembl chr 1:122,614,520...122,754,137
JBrowse link
G SYCP3 synaptonemal complex protein 3 ISO (MGI:5315075|PMID:22164254) MGI PMID:22164254 MGI:5315075 NCBI chr12:99,311,260...99,322,007
Ensembl chr12:102,711,837...102,720,728
JBrowse link
G TSSK6 testis specific serine kinase 6 ISO (MGI:3580211|PMID:15870294) UniProt PMID:15870294 MGI:3580211 NCBI chr19:18,952,643...18,954,101
Ensembl chr19:19,950,614...19,951,435
JBrowse link
sperm individualization term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SPEM1 spermatid maturation 1 ISO (MGI:3708402|PMID:17426145) MGI PMID:17426145 MGI:3708402 NCBI chr17:7,454,453...7,455,791
Ensembl chr17:7,441,032...7,442,342
JBrowse link
spermatid nucleus differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGFG1 ArfGAP with FG repeats 1 ISO (MGI:3701727|PMID:16765935) MGI PMID:16765935 MGI:3701727 NCBI chr2B:114,711,697...114,800,680
Ensembl chr2B:233,542,185...233,604,897
JBrowse link
G GOPC golgi associated PDZ and coiled-coil motif containing ISO (MGI:3701727|PMID:16765935) MGI PMID:16765935 MGI:3701727 NCBI chr 6:115,368,682...115,411,140
Ensembl chr 6:119,509,936...119,552,010
JBrowse link
G HMGB2 high mobility group box 2 ISO (MGI:3701727|PMID:16765935) MGI PMID:16765935 MGI:3701727 NCBI chr 4:165,559,848...165,562,625
Ensembl chr 4:177,797,457...177,800,952
JBrowse link
G MFSD14A major facilitator superfamily domain containing 14A ISO (MGI:5763056|PMID:27107036) MGI PMID:27107036 MGI:5763056 NCBI chr 1:102,696,558...102,741,630 JBrowse link
G NECTIN2 nectin cell adhesion molecule 2 ISO (MGI:1354802|PMID:10733589) MGI PMID:10733589 MGI:1354802 NCBI chr19:41,794,037...41,837,047
Ensembl chr19:50,399,668...50,443,024
JBrowse link
G PYGO1 pygopus family PHD finger 1 ISO (MGI:5498404|PMID:23637336) MGI PMID:23637336 MGI:5498404 NCBI chr15:34,509,787...34,556,686
Ensembl chr15:52,838,651...52,879,630
JBrowse link
G PYGO2 pygopus family PHD finger 2 ISO (MGI:5498404|PMID:23637336) MGI PMID:23637336 MGI:5498404 NCBI chr 1:130,305,547...130,310,270
Ensembl chr 1:133,912,411...133,920,308
JBrowse link
G TBPL1 TATA-box binding protein like 1 ISO (MGI:3701727|PMID:16765935) MGI PMID:16765935 MGI:3701727 NCBI chr 6:131,719,606...131,754,960
Ensembl chr 6:135,817,613...135,852,876
JBrowse link
G TMF1 TATA element modulatory factor 1 ISO (MGI:4849617|PMID:20691678) MGI PMID:20691678 MGI:4849617 NCBI chr 3:68,955,866...68,988,353
Ensembl chr 3:70,322,814...70,355,460
JBrowse link
spermatid nucleus elongation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DMRTC2 DMRT like family C2 ISO (MGI:3697293|PMID:17098235) MGI PMID:17098235 MGI:3697293 NCBI chr19:38,735,791...38,741,017 JBrowse link
G IFT88 intraflagellar transport 88 ISO (MGI:4939808|PMID:21337470) MGI PMID:21337470 MGI:4939808 NCBI chr13:1,893,102...2,017,771
Ensembl chr13:20,206,471...20,331,204
JBrowse link
G KDM3A lysine demethylase 3A ISO (MGI:3763001|PMID:17943087) MGI PMID:17943087 MGI:3763001 NCBI chr2A:86,497,531...86,548,772 JBrowse link
G LOC100987154 testis-specific H1 histone ISO (MGI:3531623|PMID:15710904) UniProt PMID:15710904 MGI:3531623 NCBI chr12:40,402,590...40,406,005
Ensembl chr12:41,281,177...41,281,944
JBrowse link
G TNP1 transition protein 1 ISO (PMID:10781074) UniProtKB PMID:10781074 NCBI chr2B:104,122,748...104,123,349
Ensembl chr2B:222,723,606...222,724,212
JBrowse link
spermatogenesis, exchange of chromosomal proteins term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHD5 chromodomain helicase DNA binding protein 5 ISO (MGI:5559810|PMID:24252660) UniProt PMID:24252660 MGI:5559810 NCBI chr 1:4,867,636...4,947,401
Ensembl chr 1:6,125,525...6,191,991
JBrowse link
G FSHR follicle stimulating hormone receptor ISO (MGI:2682484|PMID:14680821) MGI PMID:14680821 MGI:2682484 NCBI chr2A:49,088,450...49,287,688
Ensembl chr2A:50,008,328...50,207,258
JBrowse link
G LOC100979289 histone H2B type 1-A ISO (MGI:5502464|PMID:23884607) UniProt PMID:23884607 MGI:5502464 NCBI chr 6:25,561,518...25,562,817
Ensembl chr 6:25,887,397...25,887,780
JBrowse link
G PIWIL1 piwi like RNA-mediated gene silencing 1 ISO (MGI:5905675|PMID:28552346) UniProt PMID:28552346 MGI:5905675 NCBI chr12:127,951,178...127,986,173
Ensembl chr12:132,169,820...132,199,374
JBrowse link
G PSME4 proteasome activator subunit 4 ISO (MGI:5494329|PMID:23706739) UniProt PMID:23706739 MGI:5494329 NCBI chr2A:54,007,224...54,113,557
Ensembl chr2A:54,919,094...55,024,551
JBrowse link
G RNF8 ring finger protein 8 ISO (MGI:5905675|PMID:28552346) UniProt PMID:28552346 MGI:5905675 NCBI chr 6:36,918,705...36,955,380
Ensembl chr 6:38,108,414...38,145,949
JBrowse link
G SYCP3 synaptonemal complex protein 3 ISO (PMID:14643120) UniProtKB PMID:14643120 NCBI chr12:99,311,260...99,322,007
Ensembl chr12:102,711,837...102,720,728
JBrowse link
G TNP1 transition protein 1 ISO (MGI:3041389|PMID:15083521), (MGI:3056208|PMID:15189834), (MGI:3620321|PMID:15163613), (MGI:5897488|PMID:28366643) UniProt PMID:15083521, PMID:15163613, PMID:15189834, PMID:28366643 MGI:3041389, MGI:3056208, MGI:3620321, MGI:5897488 NCBI chr2B:104,122,748...104,123,349
Ensembl chr2B:222,723,606...222,724,212
JBrowse link
G TNP2 transition protein 2 ISO (MGI:3041389|PMID:15083521), (MGI:3056208|PMID:15189834), (MGI:3620321|PMID:15163613), (MGI:5897488|PMID:28366643) UniProt PMID:15083521, PMID:15163613, PMID:15189834, PMID:28366643 MGI:3041389, MGI:3056208, MGI:3620321, MGI:5897488 NCBI chr16:10,209,801...10,211,466
Ensembl chr16:11,431,822...11,433,087
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12566
    cellular process 11671
      cellular process involved in reproduction in multicellular organism 407
        germ cell development 295
          spermatid development 174
            Nebenkern assembly 0
            acrosome assembly + 21
            intramanchette transport 1
            manchette assembly 4
            manchette disassembly 1
            sperm axoneme assembly 24
            sperm capacitation + 24
            sperm individualization 1
            spermatid nucleus differentiation + 25
Path 2
Term Annotations click to browse term
  biological_process 12566
    reproduction 1481
      reproductive process 1480
        multi-organism reproductive process 1005
          sexual reproduction 804
            gamete generation 655
              male gamete generation 508
                spermatogenesis 486
                  spermatid differentiation 182
                    spermatid development 174
                      Nebenkern assembly 0
                      acrosome assembly + 21
                      intramanchette transport 1
                      manchette assembly 4
                      manchette disassembly 1
                      sperm axoneme assembly 24
                      sperm capacitation + 24
                      sperm individualization 1
                      spermatid nucleus differentiation + 25
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.