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ONTOLOGY REPORT - ANNOTATIONS


Term:spermatid development
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Accession:GO:0007286 term browser browse the term
Definition:The process whose specific outcome is the progression of a spermatid over time, from its formation to the mature structure.
Synonyms:exact_synonym: spermatid cell development;   spermiogenesis
 xref: Wikipedia:Spermiogenesis


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spermatid development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acrbp acrosin binding protein ISO (MGI:5789676|PMID:27303034) UniProt PMID:27303034 MGI:5789676 NCBI chrNW_004955413:4,251,608...4,262,095 JBrowse link
G Adad1 adenosine deaminase domain containing 1 ISO (MGI:3530700|PMID:15649457) MGI PMID:15649457 MGI:3530700 NCBI chrNW_004955428:18,190,927...18,220,361
Ensembl chrNW_004955428:18,190,973...18,220,166
JBrowse link
G Adrm1 adhesion regulating molecule 1 ISO (MGI:4849324|PMID:21048919) BHF-UCL PMID:21048919 MGI:4849324 NCBI chrNW_004955528:1,753,450...1,759,886
Ensembl chrNW_004955528:1,753,450...1,759,886
JBrowse link
G Aff4 AF4/FMR2 family member 4 ISO (MGI:3586405|PMID:16024815) MGI PMID:16024815 MGI:3586405 NCBI chrNW_004955408:4,247,730...4,305,194
Ensembl chrNW_004955408:4,248,563...4,305,194
JBrowse link
G Alms1 ALMS1 centrosome and basal body associated protein ISO (MGI:3698928|PMID:17206865)
(MGI:3639060|PMID:16513793)
MGI PMID:16513793, PMID:17206865 MGI:3639060, MGI:3698928 NCBI chrNW_004955424:12,130,496...12,258,684
Ensembl chrNW_004955424:12,130,607...12,258,522
JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 ISO (MGI:3044824|PMID:15173597) MGI PMID:15173597 MGI:3044824 NCBI chrNW_004955450:4,624,634...4,668,470
Ensembl chrNW_004955450:4,631,266...4,662,719
JBrowse link
G Brip1 BRCA1 interacting protein C-terminal helicase 1 ISO (MGI:5700253|PMID:26490168) MGI PMID:26490168 MGI:5700253 NCBI chrNW_004955451:2,705,834...2,820,610
Ensembl chrNW_004955451:2,707,793...2,818,592
JBrowse link
G Capza3 capping actin protein of muscle Z-line subunit alpha 3 ISO (MGI:3848085|PMID:19341723) RGD
MGI
PMID:9406198, PMID:19341723 MGI:3848085, RGD:69796 NCBI chrNW_004955413:14,846,394...14,847,489
Ensembl chrNW_004955413:14,846,559...14,847,458
JBrowse link
G Ccdc42 coiled-coil domain containing 42 ISO (MGI:5774582|PMID:26945718) UniProt PMID:26945718 MGI:5774582 NCBI chrNW_004955467:8,207,590...8,220,426
Ensembl chrNW_004955467:8,207,590...8,224,423
JBrowse link
G Ccdc63 coiled-coil domain containing 63 ISO (MGI:5770027|PMID:26501274) UniProt PMID:26501274 MGI:5770027 NCBI chrNW_004955482:7,673,495...7,707,065
Ensembl chrNW_004955482:7,673,285...7,707,011
JBrowse link
G Ccnb1ip1 cyclin B1 interacting protein 1 ISO (MGI:3757893|PMID:17784788) MGI PMID:17784788 MGI:3757893 NCBI chrNW_004955550:1,108,764...1,138,862
Ensembl chrNW_004955550:1,108,449...1,138,862
JBrowse link
G Cdyl chromodomain Y like ISO (MGI:6103059|PMID:28803779) UniProt PMID:28803779 MGI:6103059 NCBI chrNW_004955465:8,570,197...8,780,551
Ensembl chrNW_004955465:8,568,121...8,780,569
JBrowse link
G Celf1 CUGBP Elav-like family member 1 ISO (MGI:3699063|PMID:17130239) MGI PMID:17130239 MGI:3699063 NCBI chrNW_004955422:742,017...817,649
Ensembl chrNW_004955422:742,017...817,647
JBrowse link
G Cep131 centrosomal protein 131 ISO (MGI:5647985|PMID:24415959)
(MGI:77572|PMID:8529672)
MGI PMID:8529672, PMID:24415959 MGI:5647985, MGI:77572 NCBI chrNW_004955506:1,783,717...1,809,665
Ensembl chrNW_004955506:1,783,689...1,809,653
JBrowse link
G Cep57 centrosomal protein 57 ISO (PMID:12954732) HGNC PMID:12954732 NCBI chrNW_004955412:638,718...693,837 JBrowse link
G Cib1 calcium and integrin binding 1 ISO (MGI:3689659|PMID:16982698) UniProt PMID:16982698 MGI:3689659 NCBI chrNW_004955416:15,102,632...15,106,372
Ensembl chrNW_004955416:15,102,632...15,106,372
JBrowse link
G Ddias DNA damage induced apoptosis suppressor ISO (MGI:3718924|PMID:17515607) MGI PMID:17515607 MGI:3718924 NCBI chrNW_004955414:9,607,338...9,636,941
Ensembl chrNW_004955414:9,607,064...9,630,781
JBrowse link
G Ddx25 DEAD-box helicase 25 ISO (MGI:3040720|PMID:15096601) UniProt PMID:15096601 MGI:3040720 NCBI chrNW_004955412:26,952,655...26,973,758
Ensembl chrNW_004955412:26,952,239...26,972,100
JBrowse link
G Dmc1 DNA meiotic recombinase 1 ISO (MGI:3719060|PMID:17696610) MGI PMID:17696610 MGI:3719060 NCBI chrNW_004955413:24,685,311...24,724,269
Ensembl chrNW_004955413:24,684,073...24,724,344
JBrowse link
G Dync1h1 dynein cytoplasmic 1 heavy chain 1 ISO RGD PMID:8006076 RGD:13207350 NCBI chrNW_004955538:1,388,595...1,458,166
Ensembl chrNW_004955538:1,390,137...1,458,025
JBrowse link
G Dynll1 dynein light chain LC8-type 1 ISO RGD PMID:15983119 RGD:13208521 NCBI chrNW_004955455:11,148,041...11,150,860
Ensembl chrNW_004955455:11,148,047...11,150,859
JBrowse link
G Ehmt2 euchromatic histone lysine methyltransferase 2 ISO (MGI:3717933|PMID:17599069) MGI PMID:17599069 MGI:3717933 NCBI chrNW_004955437:396,736...411,144
Ensembl chrNW_004955437:396,742...411,144
JBrowse link
G Fancg FA complementation group G ISO (MGI:2159044|PMID:11823446) MGI PMID:11823446 MGI:2159044 NCBI chrNW_004955472:1,097,986...1,105,836
Ensembl chrNW_004955472:1,098,839...1,104,911
JBrowse link
G Fndc3a fibronectin type III domain containing 3A ISO (MGI:3702805|PMID:16904100)
(MGI:50496|PMID:1759682), (MGI:59059|PMID:2164218)
MGI PMID:1759682, PMID:2164218, PMID:16904100 MGI:3702805, MGI:50496, MGI:59059 NCBI chrNW_004955431:2,553,311...2,696,596
Ensembl chrNW_004955431:2,553,892...2,696,744
JBrowse link
G Fshr follicle stimulating hormone receptor ISO (MGI:2137997|PMID:11466221), (MGI:3797480|PMID:15973687) MGI PMID:11466221, PMID:15973687 MGI:2137997, MGI:3797480 NCBI chrNW_004955441:15,422,190...15,585,446
Ensembl chrNW_004955441:15,422,190...15,585,537
JBrowse link
G Galntl5 polypeptide N-acetylgalactosaminyltransferase like 5 ISO (PMID:24398516)
(MGI:5550318|PMID:24398516)
UniProtKB
UniProt
PMID:24398516 MGI:5550318 NCBI chrNW_004955491:6,159,609...6,189,765
Ensembl chrNW_004955491:6,170,805...6,189,631
JBrowse link
G Gapdhs glyceraldehyde-3-phosphate dehydrogenase, spermatogenic ISO RGD PMID:17375205 RGD:2301985 NCBI chrNW_004955468:4,757,080...4,773,675
Ensembl chrNW_004955468:4,756,972...4,775,757
JBrowse link
G H3f3b H3 histone, family 3B ISO (MGI:5661094|PMID:25675407) MGI PMID:25675407 MGI:5661094 NCBI chrNW_004955506:6,475,336...6,478,781
Ensembl chrNW_004955506:6,474,727...6,482,244
JBrowse link
G Hook1 hook microtubule tethering protein 1 ISO (MGI:2180892|PMID:12075009) MGI PMID:12075009 MGI:2180892 NCBI chrNW_004955464:47,895...129,414
Ensembl chrNW_004955464:47,732...129,414
JBrowse link
G Hspa2 heat shock protein family A (Hsp70) member 2 ISO (MGI:82564|PMID:8622925) MGI PMID:8622925 MGI:82564 NCBI chrNW_004955466:5,344,366...5,347,707
Ensembl chrNW_004955466:5,344,366...5,347,707
JBrowse link
G Ica1l islet cell autoantigen 1 like ISO (MGI:5787757|PMID:26306493) MGI PMID:26306493 MGI:5787757 NCBI chrNW_004955457:11,983,201...12,085,870
Ensembl chrNW_004955457:12,006,306...12,085,799
JBrowse link
G Ing2 inhibitor of growth family member 2 ISO (MGI:4867787|PMID:21124965) BHF-UCL PMID:21124965 MGI:4867787 NCBI chrNW_004955403:25,325,600...25,331,175
Ensembl chrNW_004955403:25,325,600...25,331,175
JBrowse link
G Insl6 insulin like 6 ISO (MGI:4430687|PMID:19520787) MGI PMID:19520787 MGI:4430687 NCBI chrNW_004955434:9,349,033...9,355,817
Ensembl chrNW_004955434:9,349,142...9,355,739
JBrowse link
G Iqcg IQ motif containing G ISO (MGI:5608638|PMID:24849454)
(MGI:5617699|PMID:24362311)
UniProt
MGI
PMID:24362311, PMID:24849454 MGI:5608638, MGI:5617699 NCBI chrNW_004955420:11,960,778...11,997,807
Ensembl chrNW_004955420:11,963,159...11,997,531
JBrowse link
G Jam2 junctional adhesion molecule 2 ISO (MGI:3054279|PMID:15372036) UniProt PMID:15372036 MGI:3054279 NCBI chrNW_004955407:25,531,891...25,599,551
Ensembl chrNW_004955407:25,571,570...25,599,551
JBrowse link
G Jam3 junctional adhesion molecule 3 ISO (MGI:3054279|PMID:15372036) MGI PMID:15372036 MGI:3054279 NCBI chrNW_004955412:34,901,850...34,967,394
Ensembl chrNW_004955412:34,901,681...34,967,394
JBrowse link
G Kit KIT proto-oncogene, receptor tyrosine kinase ISO (MGI:3797995|PMID:18308723) MGI PMID:18308723 MGI:3797995 NCBI chrNW_004955447:16,149,014...16,226,151
Ensembl chrNW_004955447:16,148,605...16,226,734
JBrowse link
G Klhl10 kelch like family member 10 ISO (MGI:3040865|PMID:15136734) MGI PMID:15136734 MGI:3040865 NCBI chrNW_004955451:16,042,128...16,047,718
Ensembl chrNW_004955451:16,042,128...16,047,718
JBrowse link
G Mei1 meiotic double-stranded break formation protein 1 ISO (MGI:3719060|PMID:17696610) MGI PMID:17696610 MGI:3719060 NCBI chrNW_004955413:27,188,013...27,247,608 JBrowse link
G Meioc meiosis specific with coiled-coil domain ISO (MGI:5905073|PMID:28380054) UniProt PMID:28380054 MGI:5905073 NCBI chrNW_004955451:17,534,644...17,547,095
Ensembl chrNW_004955451:17,534,659...17,545,584
JBrowse link
G Mfsd14a major facilitator superfamily domain containing 14A ISO (MGI:5763056|PMID:27107036) MGI PMID:27107036 MGI:5763056 NCBI chrNW_004955435:4,810,919...4,831,829 JBrowse link
G Mkks McKusick-Kaufman syndrome ISO (MGI:3581923|PMID:15772095) MGI PMID:15772095 MGI:3581923 NCBI chrNW_004955415:20,292,311...20,315,850
Ensembl chrNW_004955415:20,292,663...20,300,797
JBrowse link
G Nectin2 nectin cell adhesion molecule 2 ISO (MGI:1354802|PMID:10733589) MGI PMID:10733589 MGI:1354802 NCBI chrNW_004955555:1,959,702...1,985,679 JBrowse link
G Nme5 NME/NM23 family member 5 ISO (MGI:5429171|PMID:21746835)
(MGI:2664629|PMID:12788088)
(MGI:3843123|PMID:19303412)
MGI
UniProt
PMID:12788088, PMID:19303412, PMID:21746835 MGI:2664629, MGI:3843123, MGI:5429171 NCBI chrNW_004955418:2,282,721...2,301,997
Ensembl chrNW_004955418:2,282,574...2,302,106
JBrowse link
G Nsun2 NOP2/Sun RNA methyltransferase 2 ISO (MGI:5525987|PMID:23401851) CACAO PMID:23401851 MGI:5525987 NCBI chrNW_004955504:4,339,044...4,360,176
Ensembl chrNW_004955504:4,338,855...4,361,520
JBrowse link
G Nup210l nucleoporin 210 like ISO (MGI:4949532|PMID:20034429) MGI PMID:20034429 MGI:4949532 NCBI chrNW_004955545:601,727...714,225
Ensembl chrNW_004955545:601,900...714,135
JBrowse link
G Oca2 OCA2 melanosomal transmembrane protein ISO (MGI:3040715|PMID:7317942) MGI PMID:7317942 MGI:3040715 NCBI chrNW_004955533:1,522,878...1,796,673
Ensembl chrNW_004955533:1,522,795...1,797,116
JBrowse link
G Odf2 outer dense fiber of sperm tails 2 ISO RGD PMID:9698445 RGD:69913 NCBI chrNW_004955570:932,002...966,602
Ensembl chrNW_004955570:932,041...968,012
JBrowse link
G Osbp2 oxysterol binding protein 2 ISO (MGI:5606144|PMID:24245814) MGI PMID:24245814 MGI:5606144 NCBI chrNW_004955455:4,928,153...5,110,178
Ensembl chrNW_004955455:4,928,207...5,110,999
JBrowse link
G Pacrg parkin coregulated ISO (MGI:3044442|PMID:15148410) MGI PMID:15148410 MGI:3044442 NCBI chrNW_004955439:18,152,719...18,664,026
Ensembl chrNW_004955439:18,153,227...18,663,780
JBrowse link
G Pank2 pantothenate kinase 2 ISO (MGI:3513946|PMID:15525657) MGI PMID:15525657 MGI:3513946 NCBI chrNW_004955415:14,722,951...14,752,493
Ensembl chrNW_004955415:14,723,087...14,751,423
JBrowse link
G Pdilt protein disulfide isomerase like, testis expressed ISO (MGI:5314820|PMID:22357757) MGI PMID:22357757 MGI:5314820 NCBI chrNW_004955442:4,006,525...4,045,037
Ensembl chrNW_004955442:4,006,378...4,040,215
JBrowse link
G Pebp1 phosphatidylethanolamine binding protein 1 ISO RGD PMID:9508097 RGD:1357207 NCBI chrNW_004955455:13,217,012...13,222,370 JBrowse link
G Pithd1 PITH domain containing 1 ISO (MGI:6392185|PMID:31915251) MGI PMID:31915251 MGI:6392185 NCBI chrNW_004955452:3,696,632...3,708,166
Ensembl chrNW_004955452:3,696,632...3,708,166
JBrowse link
G Piwil1 piwi like RNA-mediated gene silencing 1 ISO (PMID:28552346)
(MGI:2180905|PMID:12062093), (MGI:5905675|PMID:28552346)
UniProtKB
UniProt
PMID:12062093, PMID:28552346 MGI:2180905, MGI:5905675 NCBI chrNW_004955482:1,435,925...1,451,067
Ensembl chrNW_004955482:1,435,925...1,450,857
JBrowse link
G Pld6 phospholipase D family member 6 ISO (MGI:4943609|PMID:21397848), (MGI:4943610|PMID:21397847) UniProt PMID:21397847, PMID:21397848 MGI:4943609, MGI:4943610 NCBI chrNW_004955577:698,741...702,977 JBrowse link
G Ppp2r2b protein phosphatase 2 regulatory subunit Bbeta ISO RGD PMID:8389301 RGD:633587 NCBI chrNW_004955415:7,054,296...7,510,179
Ensembl chrNW_004955415:7,090,671...7,511,995
JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 ISO RGD PMID:15713832 RGD:1599621 NCBI chrNW_004955425:6,176,335...7,335,867
Ensembl chrNW_004955425:6,176,432...7,331,446
JBrowse link
G Pygo1 pygopus family PHD finger 1 ISO (MGI:5498404|PMID:23637336) MGI PMID:23637336 MGI:5498404 NCBI chrNW_004955409:446,548...459,139 JBrowse link
G Qki QKI, KH domain containing RNA binding ISO (MGI:3044442|PMID:15148410) MGI PMID:15148410 MGI:3044442 NCBI chrNW_004955439:17,925,205...18,079,727 JBrowse link
G Ran RAN, member RAS oncogene family ISO RGD PMID:12211070 RGD:727421 NCBI chrNW_004955482:1,222,944...1,223,891 JBrowse link
G Rec8 REC8 meiotic recombination protein ISO (MGI:3719060|PMID:17696610) MGI PMID:17696610 MGI:3719060 NCBI chrNW_004955409:36,223,783...36,231,749
Ensembl chrNW_004955409:36,223,844...36,230,948
JBrowse link
G Rfx2 regulatory factor X2 ISO (MGI:5699785|PMID:26248850), (MGI:5708804|PMID:26162102), (MGI:5763317|PMID:26853561) UniProt PMID:26162102, PMID:26248850, PMID:26853561 MGI:5699785, MGI:5708804, MGI:5763317 NCBI chrNW_004955495:3,414,737...3,485,393
Ensembl chrNW_004955495:3,452,624...3,484,446
JBrowse link
G Rnf17 ring finger protein 17 ISO (MGI:3604923|PMID:16093322) MGI PMID:16093322 MGI:3604923 NCBI chrNW_004955497:282,559...429,999
Ensembl chrNW_004955497:282,653...430,371
JBrowse link
G Rnf8 ring finger protein 8 ISO (MGI:4441228|PMID:20153262) UniProt PMID:20153262 MGI:4441228 NCBI chrNW_004955437:5,807,592...5,832,213
Ensembl chrNW_004955437:5,809,082...5,832,057
JBrowse link
G Rsph1 radial spoke head component 1 ISO (MGI:3804335|PMID:18453535) MGI PMID:18453535 MGI:3804335 NCBI chrNW_004955407:39,266,888...39,284,972
Ensembl chrNW_004955407:39,266,888...39,284,972
JBrowse link
G Sbf1 SET binding factor 1 ISO RGD PMID:27335132 RGD:38549340 NCBI chrNW_004955413:33,427,283...33,450,581
Ensembl chrNW_004955413:33,427,214...33,452,415
JBrowse link
G Sec23ip SEC23 interacting protein ISO (MGI:5052222|PMID:21640725) MGI PMID:21640725 MGI:5052222 NCBI chrNW_004955551:695,026...746,359
Ensembl chrNW_004955551:695,026...746,669
JBrowse link
G Septin4 septin 4 ISO (MGI:3531234|PMID:15737931) MGI PMID:15737931 MGI:3531234 NCBI chrNW_004955451:4,505,318...4,530,387 JBrowse link
G Six5 SIX homeobox 5 ISO (MGI:3046123|PMID:15163633) MGI PMID:15163633 MGI:3046123 NCBI chrNW_004955574:221,635...225,474
Ensembl chrNW_004955574:222,292...225,401
JBrowse link
G Slirp SRA stem-loop interacting RNA binding protein ISO (MGI:5532585|PMID:23976951) MGI PMID:23976951 MGI:5532585 NCBI chrNW_004955438:1,556,462...1,561,561 JBrowse link
G Smarca2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 ISO RGD PMID:22215678 RGD:9586361 NCBI chrNW_004955434:6,420,850...6,592,797
Ensembl chrNW_004955434:6,420,854...6,594,425
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 ISO RGD PMID:22215678 RGD:9586361 NCBI chrNW_004955495:2,021,671...2,105,155
Ensembl chrNW_004955495:2,021,566...2,105,397
JBrowse link
G Smarce1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 ISO RGD PMID:22215678 RGD:9586361 NCBI chrNW_004955451:15,129,619...15,147,487
Ensembl chrNW_004955451:15,129,132...15,147,488
JBrowse link
G Sox30 SRY-box transcription factor 30 ISO (MGI:6191808|PMID:29848638) UniProt PMID:29848638 MGI:6191808 NCBI chrNW_004955408:11,790,145...11,830,426
Ensembl chrNW_004955408:11,790,079...11,828,962
JBrowse link
G Spink2 serine peptidase inhibitor Kazal type 2 ISO (PMID:28554943)
(MGI:5287926|PMID:21705336)
(MGI:6114299|PMID:28554943)
UniProt
MGI
PMID:21705336, PMID:28554943 MGI:5287926, MGI:6114299 NCBI chrNW_004955447:14,285,248...14,291,835 JBrowse link
G Spo11 SPO11 initiator of meiotic double stranded breaks ISO (MGI:3719060|PMID:17696610) MGI PMID:17696610 MGI:3719060 NCBI chrNW_004955445:2,088,144...2,103,385
Ensembl chrNW_004955445:2,088,144...2,103,385
JBrowse link
G Stk11 serine/threonine kinase 11 ISO (MGI:3829517|PMID:18774945) UniProt PMID:18774945 MGI:3829517 NCBI chrNW_004955495:6,678,195...6,699,408
Ensembl chrNW_004955495:6,678,195...6,699,058
JBrowse link
G Strbp spermatid perinuclear RNA binding protein ISO (MGI:1934697|PMID:11336498) MGI PMID:11336498 MGI:1934697 NCBI chrNW_004955419:4,732,467...4,858,872
Ensembl chrNW_004955419:4,795,953...4,852,398
JBrowse link
G Sun5 Sad1 and UNC84 domain containing 5 ISO (MGI:5916674|PMID:28945193) UniProt PMID:28945193 MGI:5916674 NCBI chrNW_004955422:28,252,245...28,273,457
Ensembl chrNW_004955422:28,252,375...28,273,814
JBrowse link
G Taf7l TATA-box binding protein associated factor 7 like ISO (MGI:3709925|PMID:17242199) MGI PMID:17242199 MGI:3709925 NCBI chrNW_004955503:7,429,876...7,451,051 JBrowse link
G Tarbp2 TARBP2 subunit of RISC loading complex ISO (MGI:1338603|PMID:10369260) MGI PMID:10369260 MGI:1338603 NCBI chrNW_004955458:793,753...798,755
Ensembl chrNW_004955458:793,759...798,806
JBrowse link
G Tdrd5 tudor domain containing 5 ISO (MGI:4946318|PMID:21383078) UniProt PMID:21383078 MGI:4946318 NCBI chrNW_004955406:18,895,010...18,961,200
Ensembl chrNW_004955406:18,895,011...18,962,333
JBrowse link
G Tmf1 TATA element modulatory factor 1 ISO (MGI:5469555|PMID:23000399)
(MGI:4849617|PMID:20691678)
MGI PMID:20691678, PMID:23000399 MGI:4849617, MGI:5469555 NCBI chrNW_004955421:18,810,199...18,837,767
Ensembl chrNW_004955421:18,810,199...18,837,761
JBrowse link
G Tnk2 tyrosine kinase non receptor 2 ISO (MGI:6246359|PMID:23562806) UniProt PMID:23562806 MGI:6246359 NCBI chrNW_004955420:12,302,463...12,337,976
Ensembl chrNW_004955420:12,300,572...12,338,058
JBrowse link
G Tnp1 transition protein 1 ISO (PMID:12743712) UniProtKB PMID:12743712 NCBI chrNW_004955453:16,387,897...16,388,513
Ensembl chrNW_004955453:16,387,527...16,388,890
JBrowse link
G Topaz1 testis and ovary specific PAZ domain containing 1 ISO (MGI:5697228|PMID:26358182) MGI PMID:26358182 MGI:5697228 NCBI chrNW_004955420:27,048,650...27,106,983
Ensembl chrNW_004955420:27,048,713...27,107,006
JBrowse link
G Trip13 thyroid hormone receptor interactor 13 ISO (MGI:3719060|PMID:17696610) MGI PMID:17696610 MGI:3719060 NCBI chrNW_004955504:434,187...452,636
Ensembl chrNW_004955504:434,159...452,671
JBrowse link
G Tssk2 testis specific serine kinase 2 ISO (MGI:3801547|PMID:18533145) UniProt PMID:18533145 MGI:3801547 NCBI chrNW_004955442:18,846,491...18,847,485 JBrowse link
G Tssk4 testis specific serine kinase 4 ISO (MGI:6189623|PMID:17927909) UniProt PMID:17927909 MGI:6189623 NCBI chrNW_004955409:36,190,182...36,191,801 JBrowse link
G Ttc21a tetratricopeptide repeat domain 21A ISO (PMID:30929735)
(MGI:6368051|PMID:30929735)
UniProt PMID:30929735 MGI:6368051 NCBI chrNW_004955427:24,833,021...24,862,199
Ensembl chrNW_004955427:24,833,071...24,862,473
JBrowse link
G Ttc26 tetratricopeptide repeat domain 26 ISO (MGI:3040715|PMID:7317942) MGI PMID:7317942 MGI:3040715 NCBI chrNW_004955494:3,861,679...3,905,499
Ensembl chrNW_004955494:3,861,519...3,905,399
JBrowse link
G Ube2j1 ubiquitin conjugating enzyme E2 J1 ISO (MGI:5617122|PMID:25320092) MGI PMID:25320092 MGI:5617122 NCBI chrNW_004955411:16,076,647...16,091,554
Ensembl chrNW_004955411:16,074,551...16,091,570
JBrowse link
G Ybx2 Y-box binding protein 2 ISO (MGI:3576442|PMID:15824319), (MGI:3696301|PMID:17035640) MGI PMID:15824319, PMID:17035640 MGI:3576442, MGI:3696301 NCBI chrNW_004955467:9,624,506...9,629,904
Ensembl chrNW_004955467:9,624,019...9,629,904
JBrowse link
G Ythdc2 YTH domain containing 2 ISO (MGI:5911610|PMID:29033321), (MGI:6109052|PMID:29087293), (MGI:6113138|PMID:29360036) UniProt PMID:29033321, PMID:29087293, PMID:29360036 MGI:5911610, MGI:6109052, MGI:6113138 NCBI chrNW_004955408:33,380,822...33,448,188
Ensembl chrNW_004955408:33,381,023...33,446,239
JBrowse link
G Zfp42 ZFP42 zinc finger protein ISO (MGI:5285464|PMID:21641340) MGI PMID:21641340 MGI:5285464 NCBI chrNW_004955403:21,222,129...21,227,341
Ensembl chrNW_004955403:21,222,138...21,227,341
JBrowse link
G Zmynd15 zinc finger MYND-type containing 15 ISO (MGI:4849621|PMID:20675388) MGI PMID:20675388 MGI:4849621 NCBI chrNW_004955467:10,136,635...10,143,016
Ensembl chrNW_004955467:10,136,650...10,143,652
JBrowse link
acrosome assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acrbp acrosin binding protein ISO (MGI:5789676|PMID:27303034) UniProt PMID:27303034 MGI:5789676 NCBI chrNW_004955413:4,251,608...4,262,095 JBrowse link
G Agfg1 ArfGAP with FG repeats 1 ISO (MGI:2153561|PMID:11711676), (MGI:3040020|PMID:14724135) MGI PMID:11711676, PMID:14724135 MGI:2153561, MGI:3040020 NCBI chrNW_004955453:7,066,509...7,127,878
Ensembl chrNW_004955453:7,069,806...7,109,703
JBrowse link
G Ccdc136 coiled-coil domain containing 136 ISO (MGI:5816406|PMID:27076447) UniProt PMID:27076447 MGI:5816406 NCBI chrNW_004955479:9,601,121...9,627,763 JBrowse link
G Chn2 chimerin 2 ISO RGD PMID:8440677 RGD:724725 NCBI chrNW_004955410:30,711,970...30,988,787 JBrowse link
G Fabp9 fatty acid binding protein 9 ISO RGD PMID:7958448 RGD:634410 NCBI chrNW_004955444:151,003...153,775
Ensembl chrNW_004955444:150,997...153,846
JBrowse link
G Kiaa0319l KIAA0319 like ISO (MGI:6198830|PMID:29991750) MGI PMID:29991750 MGI:6198830 NCBI chrNW_004955452:13,538,524...13,649,823
Ensembl chrNW_004955452:13,507,010...13,646,751
JBrowse link
G Mfsd14a major facilitator superfamily domain containing 14A ISO (MGI:5763056|PMID:27107036) MGI PMID:27107036 MGI:5763056 NCBI chrNW_004955435:4,810,919...4,831,829 JBrowse link
G Nectin2 nectin cell adhesion molecule 2 ISO (MGI:1354802|PMID:10733589) MGI PMID:10733589 MGI:1354802 NCBI chrNW_004955555:1,959,702...1,985,679 JBrowse link
G Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 ISO (MGI:2681371|PMID:13129914) MGI PMID:13129914 MGI:2681371 NCBI chrNW_004955481:608,897...686,454
Ensembl chrNW_004955481:608,897...686,452
JBrowse link
G Pla2g3 phospholipase A2 group III ISO (MGI:4459354|PMID:20424323) MGI PMID:20424323 MGI:4459354 NCBI chrNW_004955455:5,314,520...5,320,151
Ensembl chrNW_004955455:5,315,450...5,320,053
JBrowse link
G Rfx2 regulatory factor X2 ISO (MGI:5708804|PMID:26162102) UniProt PMID:26162102 MGI:5708804 NCBI chrNW_004955495:3,414,737...3,485,393
Ensembl chrNW_004955495:3,452,624...3,484,446
JBrowse link
G Sec23ip SEC23 interacting protein ISO (MGI:5052222|PMID:21640725) MGI PMID:21640725 MGI:5052222 NCBI chrNW_004955551:695,026...746,359
Ensembl chrNW_004955551:695,026...746,669
JBrowse link
G Spaca1 sperm acrosome associated 1 ISO (MGI:5437786|PMID:22949614) MGI PMID:22949614 MGI:5437786 NCBI chrNW_004955411:14,946,324...14,960,901
Ensembl chrNW_004955411:14,945,901...14,961,983
JBrowse link
G Spink2 serine peptidase inhibitor Kazal type 2 ISO (MGI:6114299|PMID:28554943) UniProt PMID:28554943 MGI:6114299 NCBI chrNW_004955447:14,285,248...14,291,835 JBrowse link
G Tbc1d20 TBC1 domain family member 20 ISO (MGI:5551670|PMID:24239381) MGI PMID:24239381 MGI:5551670 NCBI chrNW_004955597:291,541...313,799
Ensembl chrNW_004955597:291,541...314,292
JBrowse link
G Tbpl1 TATA-box binding protein like 1 ISO (MGI:2159505|PMID:11861477) MGI PMID:11861477 MGI:2159505 NCBI chrNW_004955439:2,539,465...2,548,351
Ensembl chrNW_004955439:2,539,486...2,563,720
JBrowse link
G Tmf1 TATA element modulatory factor 1 ISO (MGI:4849617|PMID:20691678) MGI PMID:20691678 MGI:4849617 NCBI chrNW_004955421:18,810,199...18,837,767
Ensembl chrNW_004955421:18,810,199...18,837,761
JBrowse link
G Zpbp zona pellucida binding protein ISO (MGI:3761850|PMID:17664285) MGI PMID:17664285 MGI:3761850 NCBI chrNW_004955456:3,887,746...3,935,541
Ensembl chrNW_004955456:3,887,839...3,936,453
JBrowse link
G Zpbp2 zona pellucida binding protein 2 ISO (MGI:3761850|PMID:17664285) MGI PMID:17664285 MGI:3761850 NCBI chrNW_004955451:14,571,707...14,579,890
Ensembl chrNW_004955451:14,571,556...14,579,948
JBrowse link
intramanchette transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cep131 centrosomal protein 131 ISO (MGI:5647985|PMID:24415959) MGI PMID:24415959 MGI:5647985 NCBI chrNW_004955506:1,783,717...1,809,665
Ensembl chrNW_004955506:1,783,689...1,809,653
JBrowse link
manchette assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cep131 centrosomal protein 131 ISO (MGI:5647985|PMID:24415959) MGI PMID:24415959 MGI:5647985 NCBI chrNW_004955506:1,783,717...1,809,665
Ensembl chrNW_004955506:1,783,689...1,809,653
JBrowse link
G Hook1 hook microtubule tethering protein 1 ISO (MGI:3040520|PMID:9674995), (MGI:3624076|PMID:16540102) MGI PMID:9674995, PMID:16540102 MGI:3040520, MGI:3624076 NCBI chrNW_004955464:47,895...129,414
Ensembl chrNW_004955464:47,732...129,414
JBrowse link
G Meig1 meiosis/spermiogenesis associated 1 ISO (MGI:5475083|PMID:23258628) MGI PMID:23258628 MGI:5475083 NCBI chrNW_004955429:19,435,004...19,444,833
Ensembl chrNW_004955429:19,433,900...19,444,360
JBrowse link
G Ttc26 tetratricopeptide repeat domain 26 ISO (MGI:3040520|PMID:9674995) MGI PMID:9674995 MGI:3040520 NCBI chrNW_004955494:3,861,679...3,905,499
Ensembl chrNW_004955494:3,861,519...3,905,399
JBrowse link
manchette disassembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rsph6a radial spoke head 6 homolog A ISO (MGI:6203178|PMID:30185526) UniProt PMID:30185526 MGI:6203178 NCBI chrNW_004955574:247,728...264,238
Ensembl chrNW_004955574:247,695...264,238
JBrowse link
positive regulation of flagellated sperm motility involved in capacitation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccr6 C-C motif chemokine receptor 6 ISO (PMID:23765988)
(MGI:5784973|PMID:23765988)
UniProtKB
UniProt
PMID:23765988 MGI:5784973 NCBI chrNW_004955439:14,921,524...14,949,493
Ensembl chrNW_004955439:14,920,601...14,924,191
JBrowse link
G LOC102004444 beta-defensin 1-like ISO (PMID:25122636) UniProtKB PMID:25122636 NCBI chrNW_004955403:53,643,328...53,644,361
Ensembl chrNW_004955403:53,643,300...53,644,505
JBrowse link
G Rnase9 ribonuclease A family member 9 (inactive) ISO (MGI:5582126|PMID:24719258) MGI PMID:24719258 MGI:5582126 NCBI chrNW_004955550:1,371,792...1,372,355 JBrowse link
proacrosomal vesicle fusion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kiaa0319l KIAA0319 like ISO (MGI:6198830|PMID:29991750) MGI PMID:29991750 MGI:6198830 NCBI chrNW_004955452:13,538,524...13,649,823
Ensembl chrNW_004955452:13,507,010...13,646,751
JBrowse link
G Sox30 SRY-box transcription factor 30 ISO (MGI:6191912|PMID:29866902) UniProt PMID:29866902 MGI:6191912 NCBI chrNW_004955408:11,790,145...11,830,426
Ensembl chrNW_004955408:11,790,079...11,828,962
JBrowse link
regulation of sperm capacitation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tcp11 t-complex 11 ISO (MGI:1097498|PMID:9322250), (MGI:5816449|PMID:9820206) UniProt PMID:9322250, PMID:9820206 MGI:1097498, MGI:5816449 NCBI chrNW_004955437:3,087,733...3,113,771
Ensembl chrNW_004955437:3,088,915...3,188,885
JBrowse link
sperm axoneme assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Armc2 armadillo repeat containing 2 ISO (PMID:30686508)
(MGI:6368074|PMID:30686508)
UniProt PMID:30686508 MGI:6368074 NCBI chrNW_004955411:33,921,459...34,021,375 JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 ISO (MGI:3512844|PMID:15539463) MGI PMID:15539463 MGI:3512844 NCBI chrNW_004955433:14,266,190...14,321,780
Ensembl chrNW_004955433:14,266,190...14,296,929
JBrowse link
G Cep131 centrosomal protein 131 ISO (MGI:5647985|PMID:24415959) MGI PMID:24415959 MGI:5647985 NCBI chrNW_004955506:1,783,717...1,809,665
Ensembl chrNW_004955506:1,783,689...1,809,653
JBrowse link
G Cfap157 cilia and flagella associated protein 157 ISO (MGI:5812811|PMID:27965440) UniProt PMID:27965440 MGI:5812811 NCBI chrNW_004955419:942,147...950,968
Ensembl chrNW_004955419:942,270...950,922
JBrowse link
G Cfap43 cilia and flagella associated protein 43 ISO (PMID:29449551)
(MGI:6402702|PMID:31884020)
(MGI:6164072|PMID:29522859)
(MGI:6119337|PMID:29449551), (MGI:6140851|PMID:28552195)
UniProt
MGI
PMID:28552195, PMID:29449551, PMID:29522859, PMID:31884020 MGI:6119337, MGI:6140851, MGI:6164072, MGI:6402702 NCBI chrNW_004955485:6,418,063...6,515,730
Ensembl chrNW_004955485:6,451,004...6,515,532
JBrowse link
G Cfap44 cilia and flagella associated protein 44 ISO (PMID:29449551)
(MGI:6164072|PMID:29522859)
(MGI:6119337|PMID:29449551), (MGI:6140851|PMID:28552195)
UniProt
MGI
PMID:28552195, PMID:29449551, PMID:29522859 MGI:6119337, MGI:6140851, MGI:6164072 NCBI chrNW_004955427:13,497,275...13,583,605
Ensembl chrNW_004955427:13,496,690...13,562,369
JBrowse link
G Cfap65 cilia and flagella associated protein 65 ISO (MGI:6393461|PMID:31571197) UniProt PMID:31571197 MGI:6393461 NCBI chrNW_004955453:14,394,853...14,431,774
Ensembl chrNW_004955453:14,397,700...14,433,204
JBrowse link
G Cfap69 cilia and flagella associated protein 69 ISO (PMID:30415212)
(MGI:6431182|PMID:30415212)
MGI PMID:30415212 MGI:6431182 NCBI chrNW_004955432:7,501,908...7,569,799
Ensembl chrNW_004955432:7,501,642...7,571,373
JBrowse link
G Cfap97d1 CFAP97 domain containing 1 ISO (MGI:6452255|PMID:32785227) UniProt PMID:32785227 MGI:6452255 NCBI chrNW_004955451:17,072,403...17,077,642
Ensembl chrNW_004955451:17,072,403...17,077,128
JBrowse link
G Dnah1 dynein axonemal heavy chain 1 ISO (PMID:24360805) UniProtKB PMID:24360805 NCBI chrNW_004955430:2,323,928...2,391,470
Ensembl chrNW_004955430:2,327,584...2,391,423
JBrowse link
G Fsip2 fibrous sheath interacting protein 2 ISO (PMID:30137358), (PMID:30745215) UniProt PMID:30137358, PMID:30745215 NCBI chrNW_004955403:12,261,233...12,334,754
Ensembl chrNW_004955403:12,261,208...12,334,754
JBrowse link
G Ift88 intraflagellar transport 88 ISO (MGI:4939808|PMID:21337470) MGI PMID:21337470 MGI:4939808 NCBI chrNW_004955497:1,338,959...1,454,788
Ensembl chrNW_004955497:1,338,904...1,455,122
JBrowse link
G Iqcg IQ motif containing G ISO (MGI:5608638|PMID:24849454) UniProt PMID:24849454 MGI:5608638 NCBI chrNW_004955420:11,960,778...11,997,807
Ensembl chrNW_004955420:11,963,159...11,997,531
JBrowse link
G Meig1 meiosis/spermiogenesis associated 1 ISO (MGI:5475083|PMID:23258628) MGI PMID:23258628 MGI:5475083 NCBI chrNW_004955429:19,435,004...19,444,833
Ensembl chrNW_004955429:19,433,900...19,444,360
JBrowse link
G Neurl1 neuralized E3 ubiquitin protein ligase 1 ISO (MGI:2151733|PMID:11585928) MGI PMID:11585928 MGI:2151733 NCBI chrNW_004955485:7,015,969...7,046,089 JBrowse link
G Pla2g3 phospholipase A2 group III ISO (MGI:4459354|PMID:20424323) MGI PMID:20424323 MGI:4459354 NCBI chrNW_004955455:5,314,520...5,320,151
Ensembl chrNW_004955455:5,315,450...5,320,053
JBrowse link
G Spag16 sperm associated antigen 16 ISO (MGI:3052627|PMID:15328412) MGI PMID:15328412 MGI:3052627 NCBI chrNW_004955457:1,543,946...2,492,686 JBrowse link
G Spef2 sperm flagellar 2 ISO (PMID:31048344), (PMID:31151990)
(MGI:5292446|PMID:21715716)
UniProt
MGI
PMID:21715716, PMID:31048344, PMID:31151990 MGI:5292446 NCBI chrNW_004955426:20,587,312...20,747,034
Ensembl chrNW_004955426:20,587,152...20,752,812
JBrowse link
G Tpgs1 tubulin polyglutamylase complex subunit 1 ISO (MGI:2387741|PMID:12242242) MGI PMID:12242242 MGI:2387741 NCBI chrNW_004955495:7,181,907...7,189,726
Ensembl chrNW_004955495:7,181,907...7,189,726
JBrowse link
G Ttc12 tetratricopeptide repeat domain 12 ISO (PMID:31978331) UniProt PMID:31978331 NCBI chrNW_004955412:14,945,237...15,011,560
Ensembl chrNW_004955412:14,945,116...15,011,708
JBrowse link
G Ttll1 tubulin tyrosine ligase like 1 ISO (MGI:4457964|PMID:20498047)
(MGI:5430875|PMID:20442420)
MGI PMID:20442420, PMID:20498047 MGI:4457964, MGI:5430875 NCBI chrNW_004955413:28,234,964...28,250,899
Ensembl chrNW_004955413:28,234,486...28,250,688
JBrowse link
G Ttll5 tubulin tyrosine ligase like 5 ISO (MGI:5498425|PMID:23558686) MGI PMID:23558686 MGI:5498425 NCBI chrNW_004955612:109,742...351,255
Ensembl chrNW_004955612:109,743...353,918
JBrowse link
G Ube2b ubiquitin conjugating enzyme E2 B ISO (MGI:2668287|PMID:12672659) MGI PMID:12672659 MGI:2668287 NCBI chrNW_004955408:5,552,619...5,572,145
Ensembl chrNW_004955408:5,552,619...5,572,145
JBrowse link
sperm capacitation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd2 abhydrolase domain containing 2, acylglycerol lipase ISO (PMID:26989199) UniProtKB PMID:26989199 NCBI chrNW_004955416:15,878,972...15,983,322
Ensembl chrNW_004955416:15,884,624...15,983,322
JBrowse link
G Bsph1 binder of sperm protein homolog 1 ISO (MGI:5465085|PMID:22539676) MGI PMID:22539676 MGI:5465085 NCBI chrNW_004955609:261,937...266,866 JBrowse link
G Catsper2 cation channel sperm associated 2 ISO (MGI:2682517|PMID:14657366) MGI PMID:14657366 MGI:2682517 NCBI chrNW_004955409:3,925,106...3,940,566 JBrowse link
G Catsper3 cation channel sperm associated 3 ISO (MGI:3694233|PMID:17227845) MGI PMID:17227845 MGI:3694233 NCBI chrNW_004955408:30,150,736...30,179,834
Ensembl chrNW_004955408:30,150,197...30,179,872
JBrowse link
G Catsper4 cation channel sperm associated 4 ISO (MGI:3694233|PMID:17227845) MGI PMID:17227845 MGI:3694233 NCBI chrNW_004955439:21,098,751...21,111,906 JBrowse link
G Catsperd cation channel sperm associated auxiliary subunit delta ISO (MGI:5315675|PMID:21224844) UniProt PMID:21224844 MGI:5315675 NCBI chrNW_004955495:3,663,878...3,711,595 JBrowse link
G Catsperz catsper channel auxiliary subunit zeta ISO (MGI:5825443|PMID:28226241)
(MGI:6316499|PMID:31056283)
UniProt PMID:28226241, PMID:31056283 MGI:5825443, MGI:6316499 NCBI chrNW_004955422:20,777,488...20,780,765 JBrowse link
G Cftr CF transmembrane conductance regulator ISO (MGI:5429843|PMID:21976599) UniProt PMID:21976599 MGI:5429843 NCBI chrNW_004955432:23,179,645...23,328,347
Ensembl chrNW_004955432:23,178,866...23,328,382
JBrowse link
G Dld dihydrolipoamide dehydrogenase ISO (MGI:3589712|PMID:15888450) MGI PMID:15888450 MGI:3589712 NCBI chrNW_004955410:12,212,981...12,238,561
Ensembl chrNW_004955410:12,212,963...12,238,561
JBrowse link
G Efcab9 EF-hand calcium binding domain 9 ISO (MGI:6316499|PMID:31056283) UniProt PMID:31056283 MGI:6316499 NCBI chrNW_004955408:24,987,401...24,993,284
Ensembl chrNW_004955408:24,988,212...24,993,963
JBrowse link
G Pcsk4 proprotein convertase subtilisin/kexin type 4 ISO (MGI:3619873|PMID:16371590)
(MGI:5784979|PMID:21302280)
(MGI:5784984|PMID:19342015)
MGI
UniProt
PMID:16371590, PMID:19342015, PMID:21302280 MGI:3619873, MGI:5784979, MGI:5784984 NCBI chrNW_004955495:6,424,426...6,460,252
Ensembl chrNW_004955495:6,453,991...6,459,744
JBrowse link
G Pebp1 phosphatidylethanolamine binding protein 1 ISO (MGI:3603744|PMID:16183867) MGI PMID:16183867 MGI:3603744 NCBI chrNW_004955455:13,217,012...13,222,370 JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha ISO (MGI:4357734|PMID:19560455) UniProt PMID:19560455 MGI:4357734 NCBI chrNW_004955415:32,794,172...32,807,944
Ensembl chrNW_004955415:32,793,718...32,812,930
JBrowse link
G Ropn1 rhophilin associated tail protein 1 ISO (MGI:5551621|PMID:23303679) MGI PMID:23303679 MGI:5551621 NCBI chrNW_004955427:23,104,178...23,140,559 JBrowse link
G Ropn1l rhophilin associated tail protein 1 like ISO (MGI:5551621|PMID:23303679) MGI PMID:23303679 MGI:5551621 NCBI chrNW_004955426:285,053...296,913
Ensembl chrNW_004955426:285,278...296,828
JBrowse link
G Septin4 septin 4 ISO (MGI:3531234|PMID:15737931) MGI PMID:15737931 MGI:3531234 NCBI chrNW_004955451:4,505,318...4,530,387 JBrowse link
G Slc26a3 solute carrier family 26 member 3 ISO (MGI:5429843|PMID:21976599) UniProt PMID:21976599 MGI:5429843 NCBI chrNW_004955410:12,102,356...12,128,620
Ensembl chrNW_004955410:12,102,356...12,128,620
JBrowse link
G Slc26a6 solute carrier family 26 member 6 ISO (MGI:5429843|PMID:21976599) UniProt PMID:21976599 MGI:5429843 NCBI chrNW_004955532:713,725...723,190
Ensembl chrNW_004955532:713,215...722,817
JBrowse link
G Spink1 serine peptidase inhibitor Kazal type 1 ISO (MGI:5428115|PMID:22228629) MGI PMID:22228629 MGI:5428115 NCBI chrNW_004955415:6,328,672...6,378,611
Ensembl chrNW_004955415:6,371,059...6,378,529
JBrowse link
sperm chromatin condensation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fshr follicle stimulating hormone receptor ISO (MGI:1855818|PMID:10775161) MGI PMID:10775161 MGI:1855818 NCBI chrNW_004955441:15,422,190...15,585,446
Ensembl chrNW_004955441:15,422,190...15,585,537
JBrowse link
G LOC106146871 testis-specific H1 histone ISO (MGI:3531623|PMID:15710904) UniProt PMID:15710904 MGI:3531623 NCBI chrNW_004955500:7,329,361...7,329,842 JBrowse link
G Selenof selenoprotein F ISO RGD PMID:11344099 RGD:728803 NCBI chrNW_004955423:7,253,980...7,285,442
Ensembl chrNW_004955423:7,254,214...7,285,179
JBrowse link
G Sycp1 synaptonemal complex protein 1 ISO (MGI:5315075|PMID:22164254) MGI PMID:22164254 MGI:5315075 NCBI chrNW_004955435:18,157,173...18,291,732 JBrowse link
G Sycp3 synaptonemal complex protein 3 ISO (MGI:5315075|PMID:22164254) MGI PMID:22164254 MGI:5315075 NCBI chrNW_004955405:37,093,330...37,102,789
Ensembl chrNW_004955405:37,093,652...37,102,856
JBrowse link
G Tssk6 testis specific serine kinase 6 ISO (MGI:3580211|PMID:15870294) UniProt PMID:15870294 MGI:3580211 NCBI chrNW_004955524:2,433,855...2,434,864
Ensembl chrNW_004955524:2,433,955...2,434,776
JBrowse link
sperm individualization term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spem1 spermatid maturation 1 ISO (MGI:3708402|PMID:17426145) MGI PMID:17426145 MGI:3708402 NCBI chrNW_004955467:9,503,229...9,504,535
Ensembl chrNW_004955467:9,503,229...9,504,535
JBrowse link
spermatid nucleus differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agfg1 ArfGAP with FG repeats 1 ISO (MGI:3701727|PMID:16765935) MGI PMID:16765935 MGI:3701727 NCBI chrNW_004955453:7,066,509...7,127,878
Ensembl chrNW_004955453:7,069,806...7,109,703
JBrowse link
G Gopc golgi associated PDZ and coiled-coil motif containing ISO (MGI:3701727|PMID:16765935) MGI PMID:16765935 MGI:3701727 NCBI chrNW_004955436:743,616...777,878 JBrowse link
G Hmgb2 high mobility group box 2 ISO (MGI:3701727|PMID:16765935) MGI PMID:16765935 MGI:3701727 NCBI chrNW_004955403:33,656,314...33,659,115
Ensembl chrNW_004955403:33,656,300...33,659,428
JBrowse link
G Mfsd14a major facilitator superfamily domain containing 14A ISO (MGI:5763056|PMID:27107036) MGI PMID:27107036 MGI:5763056 NCBI chrNW_004955435:4,810,919...4,831,829 JBrowse link
G Nectin2 nectin cell adhesion molecule 2 ISO (MGI:1354802|PMID:10733589) MGI PMID:10733589 MGI:1354802 NCBI chrNW_004955555:1,959,702...1,985,679 JBrowse link
G Pygo1 pygopus family PHD finger 1 ISO (MGI:5498404|PMID:23637336) MGI PMID:23637336 MGI:5498404 NCBI chrNW_004955409:446,548...459,139 JBrowse link
G Tbpl1 TATA-box binding protein like 1 ISO (MGI:3701727|PMID:16765935) MGI PMID:16765935 MGI:3701727 NCBI chrNW_004955439:2,539,465...2,548,351
Ensembl chrNW_004955439:2,539,486...2,563,720
JBrowse link
G Tmf1 TATA element modulatory factor 1 ISO (MGI:4849617|PMID:20691678) MGI PMID:20691678 MGI:4849617 NCBI chrNW_004955421:18,810,199...18,837,767
Ensembl chrNW_004955421:18,810,199...18,837,761
JBrowse link
spermatid nucleus elongation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmrtc2 DMRT like family C2 ISO (MGI:3697293|PMID:17098235) MGI PMID:17098235 MGI:3697293 NCBI chrNW_004955555:983,451...989,044
Ensembl chrNW_004955555:983,272...988,950
JBrowse link
G Ift88 intraflagellar transport 88 ISO (MGI:4939808|PMID:21337470) MGI PMID:21337470 MGI:4939808 NCBI chrNW_004955497:1,338,959...1,454,788
Ensembl chrNW_004955497:1,338,904...1,455,122
JBrowse link
G Kdm3a lysine demethylase 3A ISO (MGI:3763001|PMID:17943087) MGI PMID:17943087 MGI:3763001 NCBI chrNW_004955424:1,164,384...1,218,607
Ensembl chrNW_004955424:1,171,827...1,218,607
JBrowse link
G LOC106146871 testis-specific H1 histone ISO (MGI:3531623|PMID:15710904) UniProt PMID:15710904 MGI:3531623 NCBI chrNW_004955500:7,329,361...7,329,842 JBrowse link
G Tnp1 transition protein 1 ISO (PMID:10781074) UniProtKB PMID:10781074 NCBI chrNW_004955453:16,387,897...16,388,513
Ensembl chrNW_004955453:16,387,527...16,388,890
JBrowse link
spermatogenesis, exchange of chromosomal proteins term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd5 chromodomain helicase DNA binding protein 5 ISO (MGI:5559810|PMID:24252660) UniProt PMID:24252660 MGI:5559810 NCBI chrNW_004955486:6,320,380...6,369,020
Ensembl chrNW_004955486:6,320,380...6,369,065
JBrowse link
G Fshr follicle stimulating hormone receptor ISO (MGI:2682484|PMID:14680821) MGI PMID:14680821 MGI:2682484 NCBI chrNW_004955441:15,422,190...15,585,446
Ensembl chrNW_004955441:15,422,190...15,585,537
JBrowse link
G LOC102030314 histone H2B type 1-A ISO (MGI:5502464|PMID:23884607) UniProt PMID:23884607 MGI:5502464 NCBI chrNW_004955483:1,354,587...1,358,368 JBrowse link
G Piwil1 piwi like RNA-mediated gene silencing 1 ISO (MGI:5905675|PMID:28552346) UniProt PMID:28552346 MGI:5905675 NCBI chrNW_004955482:1,435,925...1,451,067
Ensembl chrNW_004955482:1,435,925...1,450,857
JBrowse link
G Psme4 proteasome activator subunit 4 ISO (MGI:5494329|PMID:23706739) UniProt PMID:23706739 MGI:5494329 NCBI chrNW_004955441:19,586,567...19,663,335
Ensembl chrNW_004955441:19,588,597...19,663,334
JBrowse link
G Rnf8 ring finger protein 8 ISO (MGI:5905675|PMID:28552346) UniProt PMID:28552346 MGI:5905675 NCBI chrNW_004955437:5,807,592...5,832,213
Ensembl chrNW_004955437:5,809,082...5,832,057
JBrowse link
G Sycp3 synaptonemal complex protein 3 ISO (PMID:14643120) UniProtKB PMID:14643120 NCBI chrNW_004955405:37,093,330...37,102,789
Ensembl chrNW_004955405:37,093,652...37,102,856
JBrowse link
G Tnp1 transition protein 1 ISO (MGI:3041389|PMID:15083521), (MGI:3056208|PMID:15189834), (MGI:3620321|PMID:15163613), (MGI:5897488|PMID:28366643) UniProt PMID:15083521, PMID:15163613, PMID:15189834, PMID:28366643 MGI:3041389, MGI:3056208, MGI:3620321, MGI:5897488 NCBI chrNW_004955453:16,387,897...16,388,513
Ensembl chrNW_004955453:16,387,527...16,388,890
JBrowse link
G Tnp2 transition protein 2 ISO (MGI:3041389|PMID:15083521), (MGI:3056208|PMID:15189834), (MGI:3620321|PMID:15163613), (MGI:5897488|PMID:28366643) UniProt PMID:15083521, PMID:15163613, PMID:15189834, PMID:28366643 MGI:3041389, MGI:3056208, MGI:3620321, MGI:5897488 NCBI chrNW_004955442:7,311,826...7,314,046 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11893
    cellular process 11099
      cellular process involved in reproduction in multicellular organism 391
        germ cell development 284
          spermatid development 165
            Nebenkern assembly 0
            acrosome assembly + 20
            intramanchette transport 1
            manchette assembly 4
            manchette disassembly 1
            sperm axoneme assembly 23
            sperm capacitation + 23
            sperm individualization 1
            spermatid nucleus differentiation + 24
Path 2
Term Annotations click to browse term
  biological_process 11893
    reproduction 1415
      reproductive process 1414
        multi-organism reproductive process 955
          sexual reproduction 766
            gamete generation 633
              male gamete generation 489
                spermatogenesis 469
                  spermatid differentiation 173
                    spermatid development 165
                      Nebenkern assembly 0
                      acrosome assembly + 20
                      intramanchette transport 1
                      manchette assembly 4
                      manchette disassembly 1
                      sperm axoneme assembly 23
                      sperm capacitation + 23
                      sperm individualization 1
                      spermatid nucleus differentiation + 24
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.