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ONTOLOGY REPORT - ANNOTATIONS


Term:spermatid development
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Accession:GO:0007286 term browser browse the term
Definition:The process whose specific outcome is the progression of a spermatid over time, from its formation to the mature structure.
Synonyms:exact_synonym: spermatid cell development;   spermiogenesis
 xref: Wikipedia:Spermiogenesis


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spermatid development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACRBP acrosin binding protein ISO (MGI:5789676|PMID:27303034) UniProt PMID:27303034 MGI:5789676 NCBI chr27:38,380,244...38,388,502
Ensembl chr27:38,380,363...38,388,496
JBrowse link
G ADAD1 adenosine deaminase domain containing 1 IEA Ensembl GO_REF:0000107 NCBI chr19:17,728,106...17,826,412
Ensembl chr19:17,728,281...17,826,185
JBrowse link
G ADRM1 adhesion regulating molecule 1 ISO (MGI:4849324|PMID:21048919) BHF-UCL PMID:21048919 MGI:4849324 NCBI chr24:46,309,478...46,314,892
Ensembl chr24:46,275,175...46,491,347
JBrowse link
G AFF4 AF4/FMR2 family member 4 IEA Ensembl GO_REF:0000107 NCBI chr11:21,157,790...21,218,750
Ensembl chr11:21,163,398...21,218,190
JBrowse link
G ALMS1 ALMS1 centrosome and basal body associated protein ISO (MGI:3639060|PMID:16513793)
(MGI:3698928|PMID:17206865)
MGI PMID:16513793, PMID:17206865 MGI:3639060, MGI:3698928 NCBI chr17:49,301,397...49,513,729
Ensembl chr17:49,301,606...49,513,625
JBrowse link
G BBS4 Bardet-Biedl syndrome 4 ISO (MGI:3044824|PMID:15173597) MGI PMID:15173597 MGI:3044824 NCBI chr30:36,058,932...36,109,206
Ensembl chr30:35,927,233...36,108,381
JBrowse link
G BRIP1 BRCA1 interacting protein C-terminal helicase 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:34,804,285...34,984,640
Ensembl chr 9:34,806,535...34,983,788
JBrowse link
G CAPZA3 capping actin protein of muscle Z-line subunit alpha 3 IEA Ensembl GO_REF:0000107 NCBI chr27:28,362,103...28,363,171
Ensembl chr27:28,362,120...28,363,019
JBrowse link
G CCDC42 coiled-coil domain containing 42 IEA Ensembl GO_REF:0000107 NCBI chr 5:33,436,642...33,445,644
Ensembl chr 5:33,436,644...33,445,644
JBrowse link
G CCDC63 coiled-coil domain containing 63 ISO (MGI:5770027|PMID:26501274) UniProt PMID:26501274 MGI:5770027 NCBI chr26:8,587,306...8,623,558
Ensembl chr26:8,587,784...8,652,946
JBrowse link
G CCNB1IP1 cyclin B1 interacting protein 1 IEA Ensembl GO_REF:0000107 NCBI chr15:17,673,065...17,701,701
Ensembl chr15:17,673,609...17,695,336
JBrowse link
G CDYL chromodomain Y like IEA Ensembl GO_REF:0000107 NCBI chr35:4,844,757...5,074,967
Ensembl chr35:4,844,779...5,073,670
JBrowse link
G CELF1 CUGBP Elav-like family member 1 IEA Ensembl GO_REF:0000107 NCBI chr18:42,105,316...42,199,017
Ensembl chr18:42,105,324...42,179,161
JBrowse link
G CEP131 centrosomal protein 131 ISO (MGI:5647985|PMID:24415959)
(MGI:77572|PMID:8529672)
MGI PMID:8529672, PMID:24415959 MGI:5647985, MGI:77572 NCBI chr 9:866,384...883,141
Ensembl chr 9:866,378...883,103
JBrowse link
G CEP57 centrosomal protein 57 IEA Ensembl GO_REF:0000107 NCBI chr21:5,314,290...5,360,474
Ensembl chr21:5,314,449...5,361,154
JBrowse link
G CIB1 calcium and integrin binding 1 IEA Ensembl GO_REF:0000107 NCBI chr 3:53,184,713...53,209,195
Ensembl chr 3:53,184,714...53,188,224
JBrowse link
G DDIAS DNA damage induced apoptosis suppressor ISO (MGI:3718924|PMID:17515607) MGI PMID:17515607 MGI:3718924 NCBI chr21:16,192,071...16,219,704
Ensembl chr21:16,199,901...16,219,107
JBrowse link
G DDX25 DEAD-box helicase 25 IEA Ensembl GO_REF:0000107 NCBI chr 5:8,566,748...8,585,965
Ensembl chr 5:8,566,754...8,586,020
JBrowse link
G DHH desert hedgehog signaling molecule IEA Ensembl GO_REF:0000107 NCBI chr27:5,490,122...5,497,144
Ensembl chr27:5,490,441...5,494,636
JBrowse link
G DMC1 DNA meiotic recombinase 1 IEA Ensembl GO_REF:0000107 NCBI chr10:26,228,662...26,265,377
Ensembl chr10:26,230,428...26,264,820
JBrowse link
G DPY19L2 dpy-19 like 2 IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr14:46,785,528...46,880,959
Ensembl chr14:46,787,335...46,881,053
JBrowse link
G DYNC1H1 dynein cytoplasmic 1 heavy chain 1 ISO RGD PMID:8006076 RGD:13207350 NCBI chr 8:69,997,021...70,064,886
Ensembl chr 8:69,997,145...70,064,825
JBrowse link
G DYNLL1 dynein light chain LC8-type 1 ISO RGD PMID:15983119 RGD:13208521 NCBI chr26:16,369,878...16,402,302
Ensembl chr26:16,398,886...16,402,021
JBrowse link
G EHMT2 euchromatic histone lysine methyltransferase 2 ISO (MGI:3717933|PMID:17599069) MGI PMID:17599069 MGI:3717933 NCBI chr12:1,341,202...1,354,602
Ensembl chr12:1,341,191...1,354,584
JBrowse link
G FANCG FA complementation group G IEA Ensembl GO_REF:0000107 NCBI chr11:51,652,939...51,659,766
Ensembl chr11:51,652,944...51,659,751
JBrowse link
G FNDC3A fibronectin type III domain containing 3A IEA Ensembl GO_REF:0000107 NCBI chr22:2,524,173...2,700,223
Ensembl chr22:2,526,381...2,700,780
JBrowse link
G FSCN3 fascin actin-bundling protein 3 IEA InterPro GO_REF:0000002 NCBI chr14:8,719,857...8,730,881
Ensembl chr14:8,722,069...8,730,729
JBrowse link
G FSHR follicle stimulating hormone receptor ISO (MGI:2137997|PMID:11466221), (MGI:3797480|PMID:15973687) MGI PMID:11466221, PMID:15973687 MGI:2137997, MGI:3797480 NCBI chr10:50,765,591...50,938,643
Ensembl chr10:50,770,995...50,938,474
JBrowse link
G GALNTL5 polypeptide N-acetylgalactosaminyltransferase like 5 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:15,841,187...15,898,211
Ensembl chr16:15,841,211...15,898,199
JBrowse link
G GAPDHS glyceraldehyde-3-phosphate dehydrogenase, spermatogenic ISO RGD PMID:17375205 RGD:2301985 NCBI chr 1:117,121,290...117,129,159
Ensembl chr 1:117,121,293...117,129,164
JBrowse link
G H3-3A H3.3 histone A IEA Ensembl GO_REF:0000107 NCBI chr 7:38,797,168...38,805,417
Ensembl chr 7:38,797,448...38,805,416
JBrowse link
G H3-3B H3.3 histone B IEA Ensembl GO_REF:0000107 NCBI chr 9:4,805,655...4,808,076
Ensembl chr 9:4,805,650...4,833,503
JBrowse link
G HOOK1 hook microtubule tethering protein 1 ISO (MGI:2180892|PMID:12075009) MGI PMID:12075009 MGI:2180892 NCBI chr 5:49,994,930...50,060,513
Ensembl chr 5:49,998,241...50,060,525
JBrowse link
G HSPA2 heat shock protein family A (Hsp70) member 2 IEA Ensembl GO_REF:0000107 NCBI chr 8:38,967,104...38,969,806
Ensembl chr 8:38,967,400...38,969,313
JBrowse link
G ICA1L islet cell autoantigen 1 like IEA Ensembl GO_REF:0000107 NCBI chr37:11,674,970...11,754,931
Ensembl chr37:11,678,125...11,741,997
JBrowse link
G ING2 inhibitor of growth family member 2 IEA Ensembl GO_REF:0000107 NCBI chr16:46,843,478...46,850,856
Ensembl chr16:46,845,289...46,850,637
JBrowse link
G INSL6 insulin like 6 ISO (MGI:4430687|PMID:19520787) MGI PMID:19520787 MGI:4430687 NCBI chr 1:93,457,854...93,474,777
Ensembl chr 1:93,459,945...93,474,793
JBrowse link
G IQCG IQ motif containing G ISO (MGI:5617699|PMID:24362311)
(MGI:5608638|PMID:24849454)
MGI
UniProt
PMID:24362311, PMID:24849454 MGI:5608638, MGI:5617699 NCBI chr33:28,745,089...28,791,744
Ensembl chr33:28,745,316...28,800,119
JBrowse link
G JAM2 junctional adhesion molecule 2 IEA Ensembl GO_REF:0000107 NCBI chr31:21,137,378...21,198,278
Ensembl chr31:21,137,363...21,197,668
JBrowse link
G JAM3 junctional adhesion molecule 3 IEA Ensembl GO_REF:0000107 NCBI chr 5:1,082,619...1,165,188
Ensembl chr 5:1,084,560...1,165,121
JBrowse link
G KIT KIT proto-oncogene, receptor tyrosine kinase IEA Ensembl GO_REF:0000107 NCBI chr13:47,108,442...47,190,935
Ensembl chr13:47,108,504...47,190,029
JBrowse link
G KLHL10 kelch like family member 10 IEA Ensembl GO_REF:0000107 NCBI chr 9:20,983,869...20,989,159
Ensembl chr 9:20,983,833...20,989,140
JBrowse link
G LOC100687249 synaptonemal complex protein 3-like IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:120,946,366...121,042,076 JBrowse link
G LOC102152531 synaptonemal complex protein 3-like IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:121,060,275...121,074,166 JBrowse link
G LOC486426 testis-specific serine/threonine-protein kinase 2 IEA Ensembl GO_REF:0000107
G LOC486445 RIMS-binding protein 3A-like IEA Ensembl GO_REF:0000107 NCBI chr26:30,819,266...30,824,791 JBrowse link
G MEI1 meiotic double-stranded break formation protein 1 IEA Ensembl GO_REF:0000107 NCBI chr10:23,533,749...23,606,875
Ensembl chr10:23,518,214...23,606,816
JBrowse link
G MEIOC meiosis specific with coiled-coil domain IEA Ensembl GO_REF:0000107 NCBI chr 9:18,795,289...18,814,677
Ensembl chr 9:18,796,799...18,814,682
JBrowse link
G MFSD14A major facilitator superfamily domain containing 14A ISO (MGI:5763056|PMID:27107036) MGI PMID:27107036 MGI:5763056 NCBI chr 6:49,902,739...49,927,631
Ensembl chr 6:49,903,484...49,927,638
JBrowse link
G MKKS McKusick-Kaufman syndrome IEA Ensembl GO_REF:0000107 NCBI chr24:11,887,504...11,914,055
Ensembl chr24:11,898,236...11,913,740
JBrowse link
G NECTIN2 nectin cell adhesion molecule 2 ISO (MGI:1354802|PMID:10733589) MGI PMID:10733589 MGI:1354802 NCBI chr 1:110,543,140...110,569,168
Ensembl chr 1:110,543,247...110,569,143
JBrowse link
G NECTIN3 nectin cell adhesion molecule 3 IEA InterPro GO_REF:0000002 NCBI chr33:15,868,813...16,173,158
Ensembl chr33:15,911,411...15,933,307
JBrowse link
G NME5 NME/NM23 family member 5 IEA Ensembl GO_REF:0000107 NCBI chr11:25,772,162...25,792,856
Ensembl chr11:25,772,157...25,792,176
JBrowse link
G NSUN2 NOP2/Sun RNA methyltransferase 2 IEA Ensembl GO_REF:0000107 NCBI chr34:7,145,176...7,172,761
Ensembl chr34:7,144,586...7,172,335
JBrowse link
G NUP210L nucleoporin 210 like IEA Ensembl GO_REF:0000107 NCBI chr 7:43,068,259...43,149,202
Ensembl chr 7:43,068,341...43,161,853
JBrowse link
G OCA2 OCA2 melanosomal transmembrane protein IEA Ensembl GO_REF:0000107 NCBI chr 3:32,361,825...32,713,631
Ensembl chr 3:32,361,517...32,713,572
JBrowse link
G ODF2 outer dense fiber of sperm tails 2 ISO RGD PMID:9698445 RGD:69913 NCBI chr 9:55,060,437...55,096,363
Ensembl chr 9:55,060,157...55,096,364
JBrowse link
G OSBP2 oxysterol binding protein 2 IEA Ensembl GO_REF:0000107 NCBI chr26:23,742,191...23,938,021
Ensembl chr26:23,739,648...23,936,562
JBrowse link
G PACRG parkin coregulated IEA Ensembl GO_REF:0000107 NCBI chr 1:51,202,146...51,717,076
Ensembl chr 1:51,202,164...51,717,070
JBrowse link
G PANK2 pantothenate kinase 2 ISO (MGI:3513946|PMID:15525657) MGI PMID:15525657 MGI:3513946 NCBI chr24:17,461,406...17,475,248
Ensembl chr24:17,463,447...17,490,360
JBrowse link
G PDILT protein disulfide isomerase like, testis expressed IEA Ensembl GO_REF:0000107 NCBI chr 6:24,943,090...24,985,745
Ensembl chr 6:24,951,694...24,985,688
JBrowse link
G PEBP1 phosphatidylethanolamine binding protein 1 ISO RGD PMID:9508097 RGD:1357207 NCBI chr26:14,522,124...14,526,370
Ensembl chr26:14,500,074...14,529,354
JBrowse link
G PITHD1 PITH domain containing 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:75,714,592...75,721,301
Ensembl chr 2:75,708,988...75,721,286
JBrowse link
G PIWIL1 piwi like RNA-mediated gene silencing 1 IEA InterPro GO_REF:0000002 NCBI chr26:1,760,544...1,791,204
Ensembl chr26:1,761,149...1,791,185
JBrowse link
G PLD6 phospholipase D family member 6 ISS
IEA
UniProtKB
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr 5:42,208,594...42,212,403
Ensembl chr 5:42,208,609...42,210,796
JBrowse link
G PPP2R2B protein phosphatase 2 regulatory subunit Bbeta ISO RGD PMID:8389301 RGD:633587 NCBI chr 2:41,005,259...41,447,048
Ensembl chr 2:41,005,644...41,459,878
JBrowse link
G PRKG1 protein kinase cGMP-dependent 1 ISO RGD PMID:15713832 RGD:1599621 NCBI chr26:35,732,974...36,932,744
Ensembl chr26:35,737,242...36,932,729
JBrowse link
G PRM2 protamine 2 IEA InterPro GO_REF:0000002 NCBI chr 6:31,492,208...31,492,852
Ensembl chr 6:31,492,208...31,492,852
JBrowse link
G PYGO1 pygopus family PHD finger 1 ISO (MGI:5498404|PMID:23637336) MGI PMID:23637336 MGI:5498404 NCBI chr30:20,889,246...20,919,512
Ensembl chr30:20,895,785...20,919,863
JBrowse link
G PYGO2 pygopus family PHD finger 2 ISO (MGI:5498404|PMID:23637336) MGI PMID:23637336 MGI:5498404 NCBI chr 7:42,509,760...42,513,744
Ensembl chr 7:42,509,968...42,512,091
JBrowse link
G QKI QKI, KH domain containing RNA binding IEA Ensembl GO_REF:0000107 NCBI chr 1:51,800,294...51,956,891
Ensembl chr 1:51,800,309...51,952,714
JBrowse link
G RAN RAN, member RAS oncogene family ISO RGD PMID:12211070 RGD:727421 NCBI chr26:1,435,077...1,436,893
Ensembl chr26:1,434,720...1,436,993
JBrowse link
G REC8 REC8 meiotic recombination protein IEA Ensembl GO_REF:0000107 NCBI chr 8:4,165,637...4,171,488
Ensembl chr 8:4,165,879...4,171,486
JBrowse link
G RFX2 regulatory factor X2 ISO (MGI:5699785|PMID:26248850), (MGI:5708804|PMID:26162102), (MGI:5763317|PMID:26853561) UniProt PMID:26162102, PMID:26248850, PMID:26853561 MGI:5699785, MGI:5708804, MGI:5763317 NCBI chr20:54,013,556...54,111,783
Ensembl chr20:54,070,051...54,110,220
JBrowse link
G RNF17 ring finger protein 17 IEA Ensembl GO_REF:0000107 NCBI chr25:18,614,563...18,728,119
Ensembl chr25:18,613,995...18,728,147
JBrowse link
G RNF8 ring finger protein 8 ISO (MGI:4441228|PMID:20153262) UniProt PMID:20153262 MGI:4441228 NCBI chr12:6,380,365...6,415,407
Ensembl chr12:6,292,459...6,415,382
JBrowse link
G RSPH1 radial spoke head component 1 IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr31:36,771,829...36,811,067
Ensembl chr31:36,789,571...36,812,050
JBrowse link
G SBF1 SET binding factor 1 ISO RGD PMID:27335132 RGD:38549340 NCBI chr10:16,823,456...16,845,800
Ensembl chr10:16,828,599...16,845,789
JBrowse link
G SEC23IP SEC23 interacting protein ISO (MGI:5052222|PMID:21640725) MGI PMID:21640725 MGI:5052222 NCBI chr28:30,007,780...30,047,513
Ensembl chr28:30,007,774...30,046,785
JBrowse link
G SEPTIN4 septin 4 ISO (MGI:3531234|PMID:15737931) MGI PMID:15737931 MGI:3531234 NCBI chr 9:33,138,167...33,162,212
Ensembl chr 9:33,138,165...33,157,996
JBrowse link
G SIX5 SIX homeobox 5 ISO (MGI:3046123|PMID:15163633) MGI PMID:15163633 MGI:3046123 NCBI chr 1:109,835,781...109,839,925
Ensembl chr 1:109,835,577...109,837,921
JBrowse link
G SLIRP SRA stem-loop interacting RNA binding protein IEA Ensembl GO_REF:0000107 NCBI chr 8:50,471,175...50,478,923
Ensembl chr 8:50,471,228...50,481,268
JBrowse link
G SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 ISO RGD PMID:22215678 RGD:9586361 NCBI chr 1:90,709,221...90,884,295
Ensembl chr 1:90,712,520...90,883,622
JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 ISO RGD PMID:22215678 RGD:9586361 NCBI chr20:50,175,489...50,268,865
Ensembl chr20:50,175,687...50,268,836
JBrowse link
G SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 ISO RGD PMID:22215678 RGD:9586361 NCBI chr 9:22,015,402...22,036,424
Ensembl chr 9:22,015,600...22,035,442
JBrowse link
G SOX30 SRY-box transcription factor 30 ISO (MGI:6191808|PMID:29848638) UniProt PMID:29848638 MGI:6191808 NCBI chr 4:52,587,163...52,615,945
Ensembl chr 4:52,587,355...52,615,945
JBrowse link
G SPINK2 serine peptidase inhibitor, Kazal type 2 IEA InterPro GO_REF:0000002 NCBI chr13:48,952,869...48,964,862
Ensembl chr13:48,944,135...48,964,831
JBrowse link
G SPO11 SPO11 initiator of meiotic double stranded breaks IEA Ensembl GO_REF:0000107 NCBI chr24:42,345,595...42,360,851
Ensembl chr24:42,345,547...42,384,481
JBrowse link
G STK11 serine/threonine kinase 11 ISO (MGI:3829517|PMID:18774945) UniProt PMID:18774945 MGI:3829517 NCBI chr20:57,558,966...57,579,163
Ensembl chr20:57,559,424...57,579,118
JBrowse link
G STRBP spermatid perinuclear RNA binding protein IEA Ensembl GO_REF:0000107 NCBI chr 9:59,543,172...59,689,035
Ensembl chr 9:59,614,129...59,689,032
JBrowse link
G SUN5 Sad1 and UNC84 domain containing 5 ISO (MGI:5916674|PMID:28945193) UniProt PMID:28945193 MGI:5916674 NCBI chr24:22,255,919...22,272,304
Ensembl chr24:22,255,921...22,272,170
JBrowse link
G TAF7L TATA-box binding protein associated factor 7 like ISO (MGI:3709925|PMID:17242199) MGI PMID:17242199 MGI:3709925 NCBI chr  X:75,219,448...75,238,309
Ensembl chr  X:75,220,248...75,239,041
JBrowse link
G TARBP2 TARBP2 subunit of RISC loading complex IEA Ensembl GO_REF:0000107 NCBI chr27:1,715,157...1,720,050
Ensembl chr27:1,715,158...1,726,885
JBrowse link
G TDRD5 tudor domain containing 5 ISS
IEA
UniProtKB
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr 7:20,259,940...20,348,014
Ensembl chr 7:20,261,630...20,348,650
JBrowse link
G TMF1 TATA element modulatory factor 1 ISO (MGI:5469555|PMID:23000399)
(MGI:4849617|PMID:20691678)
MGI PMID:20691678, PMID:23000399 MGI:4849617, MGI:5469555 NCBI chr20:22,684,150...22,716,107
Ensembl chr20:22,684,159...22,714,432
JBrowse link
G TNK2 tyrosine kinase non receptor 2 ISO (MGI:6246359|PMID:23562806) UniProt PMID:23562806 MGI:6246359 NCBI chr33:29,153,636...29,177,568
Ensembl chr33:29,152,851...29,179,718
JBrowse link
G TNP1 transition protein 1 ISO (PMID:12743712) UniProtKB PMID:12743712 NCBI chr37:23,742,875...23,743,417
Ensembl chr37:23,727,538...23,743,365
JBrowse link
G TOPAZ1 testis and ovary specific PAZ domain containing 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr23:2,009,526...2,086,669
Ensembl chr23:2,009,613...2,086,697
JBrowse link
G TRIP13 thyroid hormone receptor interactor 13 IEA Ensembl GO_REF:0000107 NCBI chr34:11,522,940...11,539,885
Ensembl chr34:11,522,940...11,539,885
JBrowse link
G TSSK1B testis specific serine kinase 1B ISO (MGI:3801547|PMID:18533145) UniProt PMID:18533145 MGI:3801547
G TSSK4 testis specific serine kinase 4 IEA Ensembl GO_REF:0000107 NCBI chr 8:4,192,060...4,195,052
Ensembl chr 8:4,192,230...4,194,685
JBrowse link
G TTC21A tetratricopeptide repeat domain 21A IEA Ensembl GO_REF:0000107 NCBI chr23:8,776,252...8,812,480
Ensembl chr23:8,781,582...8,811,031
JBrowse link
G TTC26 tetratricopeptide repeat domain 26 ISO (MGI:3040715|PMID:7317942) MGI PMID:7317942 MGI:3040715 NCBI chr16:9,528,236...9,581,089
Ensembl chr16:9,530,445...9,580,839
JBrowse link
G UBE2J1 ubiquitin conjugating enzyme E2 J1 IEA Ensembl GO_REF:0000107 NCBI chr12:48,542,432...48,570,716
Ensembl chr12:48,545,396...48,571,467
JBrowse link
G YBX2 Y-box binding protein 2 ISO (MGI:3576442|PMID:15824319), (MGI:3696301|PMID:17035640) MGI PMID:15824319, PMID:17035640 MGI:3576442, MGI:3696301 NCBI chr 5:32,244,536...32,250,130
Ensembl chr 5:32,245,056...32,251,985
JBrowse link
G YTHDC2 YTH domain containing 2 IEA Ensembl GO_REF:0000107 NCBI chr11:3,537,571...3,613,455
Ensembl chr11:3,536,854...3,612,282
JBrowse link
G ZFP42 ZFP42 zinc finger protein ISO (MGI:5285464|PMID:21641340) MGI PMID:21641340 MGI:5285464 NCBI chr16:43,091,607...43,092,521
Ensembl chr16:43,091,607...43,092,371
JBrowse link
G ZMYND15 zinc finger MYND-type containing 15 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:31,811,471...31,816,850
Ensembl chr 5:31,811,471...31,816,345
JBrowse link
acrosome assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACRBP acrosin binding protein IEA Ensembl GO_REF:0000107 NCBI chr27:38,380,244...38,388,502
Ensembl chr27:38,380,363...38,388,496
JBrowse link
G AGFG1 ArfGAP with FG repeats 1 IEA Ensembl GO_REF:0000107 NCBI chr25:40,229,732...40,307,277
Ensembl chr25:40,243,734...40,301,135
JBrowse link
G CCDC136 coiled-coil domain containing 136 ISO (MGI:5816406|PMID:27076447) UniProt PMID:27076447 MGI:5816406 NCBI chr14:7,825,786...7,851,214
Ensembl chr14:7,825,787...7,851,162
JBrowse link
G CHN2 chimerin 2 ISO RGD PMID:8440677 RGD:724725 NCBI chr14:42,217,678...42,513,370
Ensembl chr14:42,217,739...42,512,188
JBrowse link
G KIAA0319L KIAA0319 like ISO (MGI:6198830|PMID:29991750) MGI PMID:29991750 MGI:6198830 NCBI chr15:6,583,519...6,674,868
Ensembl chr15:6,583,488...6,675,579
JBrowse link
G LOC474798 thioredoxin-like ISO RGD PMID:15181017 RGD:1303999 NCBI chr11:65,228,807...65,291,274 JBrowse link
G MFSD14A major facilitator superfamily domain containing 14A IEA Ensembl GO_REF:0000107 NCBI chr 6:49,902,739...49,927,631
Ensembl chr 6:49,903,484...49,927,638
JBrowse link
G NECTIN2 nectin cell adhesion molecule 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:110,543,140...110,569,168
Ensembl chr 1:110,543,247...110,569,143
JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:46,648,057...46,731,259
Ensembl chr 9:46,648,052...46,771,400
JBrowse link
G PLA2G3 phospholipase A2 group III IEA Ensembl GO_REF:0000107 NCBI chr26:24,127,074...24,132,508
Ensembl chr26:24,128,005...24,132,508
JBrowse link
G RFX2 regulatory factor X2 IEA Ensembl GO_REF:0000107 NCBI chr20:54,013,556...54,111,783
Ensembl chr20:54,070,051...54,110,220
JBrowse link
G SEC23IP SEC23 interacting protein ISO (MGI:5052222|PMID:21640725) MGI PMID:21640725 MGI:5052222 NCBI chr28:30,007,780...30,047,513
Ensembl chr28:30,007,774...30,046,785
JBrowse link
G SPACA1 sperm acrosome associated 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:47,449,889...47,467,586
Ensembl chr12:47,449,884...47,467,543
JBrowse link
G SPINK2 serine peptidase inhibitor, Kazal type 2 IEA Ensembl GO_REF:0000107 NCBI chr13:48,952,869...48,964,862
Ensembl chr13:48,944,135...48,964,831
JBrowse link
G TBC1D20 TBC1 domain family member 20 IEA Ensembl GO_REF:0000107 NCBI chr24:20,400,647...20,419,652
Ensembl chr24:20,400,791...20,419,655
JBrowse link
G TBPL1 TATA-box binding protein like 1 ISO (MGI:2159505|PMID:11861477) MGI PMID:11861477 MGI:2159505 NCBI chr 1:26,898,344...26,938,452
Ensembl chr 1:26,899,859...26,936,995
JBrowse link
G TMF1 TATA element modulatory factor 1 IEA Ensembl GO_REF:0000107 NCBI chr20:22,684,150...22,716,107
Ensembl chr20:22,684,159...22,714,432
JBrowse link
G ZPBP zona pellucida binding protein IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:1,374,312...1,461,722
Ensembl chr18:1,374,331...1,461,710
JBrowse link
G ZPBP2 zona pellucida binding protein 2 IEA Ensembl GO_REF:0000107 NCBI chr 9:22,632,114...22,639,507
Ensembl chr 9:22,632,444...22,639,338
JBrowse link
intramanchette transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEP131 centrosomal protein 131 ISO (MGI:5647985|PMID:24415959) MGI PMID:24415959 MGI:5647985 NCBI chr 9:866,384...883,141
Ensembl chr 9:866,378...883,103
JBrowse link
manchette assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEP131 centrosomal protein 131 ISO (MGI:5647985|PMID:24415959) MGI PMID:24415959 MGI:5647985 NCBI chr 9:866,384...883,141
Ensembl chr 9:866,378...883,103
JBrowse link
G HOOK1 hook microtubule tethering protein 1 IEA Ensembl GO_REF:0000107 NCBI chr 5:49,994,930...50,060,513
Ensembl chr 5:49,998,241...50,060,525
JBrowse link
G MEIG1 meiosis/spermiogenesis associated 1 ISO (MGI:5475083|PMID:23258628) MGI PMID:23258628 MGI:5475083 NCBI chr 2:21,675,003...21,684,020
Ensembl chr 2:21,675,012...21,679,456
JBrowse link
G TTC26 tetratricopeptide repeat domain 26 IEA Ensembl GO_REF:0000107 NCBI chr16:9,528,236...9,581,089
Ensembl chr16:9,530,445...9,580,839
JBrowse link
manchette disassembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RSPH6A radial spoke head 6 homolog A IEA Ensembl GO_REF:0000107 NCBI chr 1:109,795,813...109,814,590
Ensembl chr 1:109,795,580...109,814,590
JBrowse link
negative regulation of sperm capacitation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC491264 beta-lactoglobulin-2 ISO (PMID:15883155) UniProtKB PMID:15883155 NCBI chr 9:49,688,619...49,691,690 JBrowse link
positive regulation of flagellated sperm motility involved in capacitation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCR6 C-C motif chemokine receptor 6 IEA Ensembl GO_REF:0000107 NCBI chr 1:54,932,798...54,960,646
Ensembl chr 1:54,932,690...54,959,740
JBrowse link
G DEFB1 defensin beta 1 IEA Ensembl GO_REF:0000107 NCBI chr16:58,871,018...58,881,592
Ensembl chr16:58,871,018...58,881,592
JBrowse link
G IQCF1 IQ motif containing F1 ISO (MGI:5708001|PMID:25380116) UniProt PMID:25380116 MGI:5708001 NCBI chr20:37,797,253...37,799,110
Ensembl chr20:37,797,325...37,799,110
JBrowse link
G RNASE9 ribonuclease A family member 9 (inactive) ISO (MGI:5582126|PMID:24719258) MGI PMID:24719258 MGI:5582126 NCBI chr15:17,875,825...17,878,702 JBrowse link
proacrosomal vesicle fusion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KIAA0319L KIAA0319 like ISO (MGI:6198830|PMID:29991750) MGI PMID:29991750 MGI:6198830 NCBI chr15:6,583,519...6,674,868
Ensembl chr15:6,583,488...6,675,579
JBrowse link
G SOX30 SRY-box transcription factor 30 IEA Ensembl GO_REF:0000107 NCBI chr 4:52,587,163...52,615,945
Ensembl chr 4:52,587,355...52,615,945
JBrowse link
regulation of sperm capacitation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TCP11 t-complex 11 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:4,286,863...4,306,152
Ensembl chr12:4,286,876...4,306,273
JBrowse link
sperm axoneme assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARMC2 armadillo repeat containing 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:65,829,110...65,933,378
Ensembl chr12:65,824,672...65,933,098
JBrowse link
G BBS2 Bardet-Biedl syndrome 2 IEA Ensembl GO_REF:0000107 NCBI chr 2:59,650,439...59,705,728
Ensembl chr 2:59,677,216...59,705,730
JBrowse link
G CEP131 centrosomal protein 131 ISO (MGI:5647985|PMID:24415959) MGI PMID:24415959 MGI:5647985 NCBI chr 9:866,384...883,141
Ensembl chr 9:866,378...883,103
JBrowse link
G CFAP157 cilia and flagella associated protein 157 IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 9:55,678,266...55,684,757
Ensembl chr 9:55,678,264...55,727,680
JBrowse link
G CFAP206 cilia and flagella associated protein 206 ISO (MGI:6452763|PMID:32376681) UniProt PMID:32376681 MGI:6452763 NCBI chr12:46,898,734...46,961,603
Ensembl chr12:46,898,937...46,961,562
JBrowse link
G CFAP43 cilia and flagella associated protein 43 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr28:16,443,417...16,555,027
Ensembl chr28:16,443,389...16,555,792
JBrowse link
G CFAP44 cilia and flagella associated protein 44 IEA Ensembl GO_REF:0000107 NCBI chr33:17,633,209...17,759,587
Ensembl chr33:17,633,214...17,759,720
JBrowse link
G CFAP65 cilia and flagella associated protein 65 IEA Ensembl GO_REF:0000107 NCBI chr37:25,569,302...25,601,943
Ensembl chr37:25,569,303...25,623,885
JBrowse link
G CFAP69 cilia and flagella associated protein 69 ISO (PMID:30415212)
(MGI:6431182|PMID:30415212)
MGI PMID:30415212 MGI:6431182 NCBI chr14:16,154,334...16,209,776
Ensembl chr14:16,154,562...16,209,858
JBrowse link
G CFAP97D1 CFAP97 domain containing 1 ISO (MGI:6452255|PMID:32785227) UniProt PMID:32785227 MGI:6452255 NCBI chr 9:19,500,889...19,517,607
Ensembl chr 9:19,513,502...19,517,129
JBrowse link
G DNAH1 dynein axonemal heavy chain 1 IEA Ensembl GO_REF:0000107 NCBI chr20:37,364,836...37,441,486
Ensembl chr20:37,364,842...37,465,807
JBrowse link
G FSIP2 fibrous sheath interacting protein 2 IEA Ensembl GO_REF:0000107 NCBI chr36:28,196,668...28,271,660
Ensembl chr36:28,196,493...28,271,662
JBrowse link
G IFT88 intraflagellar transport 88 ISO (MGI:4939808|PMID:21337470) MGI PMID:21337470 MGI:4939808 NCBI chr25:17,414,965...17,551,405
Ensembl chr25:17,414,965...17,551,266
JBrowse link
G IQCG IQ motif containing G IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr33:28,745,089...28,791,744
Ensembl chr33:28,745,316...28,800,119
JBrowse link
G MEIG1 meiosis/spermiogenesis associated 1 ISO (MGI:5475083|PMID:23258628) MGI PMID:23258628 MGI:5475083 NCBI chr 2:21,675,003...21,684,020
Ensembl chr 2:21,675,012...21,679,456
JBrowse link
G NEURL1 neuralized E3 ubiquitin protein ligase 1 IEA Ensembl GO_REF:0000107 NCBI chr28:15,856,494...15,935,897
Ensembl chr28:15,856,616...15,933,763
JBrowse link
G PLA2G3 phospholipase A2 group III IEA Ensembl GO_REF:0000107 NCBI chr26:24,127,074...24,132,508
Ensembl chr26:24,128,005...24,132,508
JBrowse link
G SPAG16 sperm associated antigen 16 IEA Ensembl GO_REF:0000107 NCBI chr37:20,782,855...21,690,523
Ensembl chr37:20,782,867...21,690,333
JBrowse link
G SPEF2 sperm flagellar 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:72,699,672...72,864,260
Ensembl chr 4:72,699,938...72,864,266
JBrowse link
G STXBP1 syntaxin binding protein 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:55,690,939...55,768,008
Ensembl chr 9:55,678,264...55,727,680
JBrowse link
G TPGS1 tubulin polyglutamylase complex subunit 1 IEA Ensembl GO_REF:0000107 NCBI chr20:57,971,465...57,977,525
Ensembl chr20:57,971,704...57,977,486
JBrowse link
G TTC12 tetratricopeptide repeat domain 12 ISO (PMID:31978331) UniProt PMID:31978331 NCBI chr 5:19,829,873...19,874,934
Ensembl chr 5:19,829,874...19,873,145
JBrowse link
G TTLL1 tubulin tyrosine ligase like 1 IEA Ensembl GO_REF:0000107 NCBI chr10:22,456,150...22,492,375
Ensembl chr10:22,456,146...22,488,505
JBrowse link
G TTLL5 tubulin tyrosine ligase like 5 ISO (MGI:5498425|PMID:23558686) MGI PMID:23558686 MGI:5498425 NCBI chr 8:48,651,766...48,920,733
Ensembl chr 8:48,651,814...48,920,039
JBrowse link
G UBE2B ubiquitin conjugating enzyme E2 B ISO (MGI:2668287|PMID:12672659) MGI PMID:12672659 MGI:2668287 NCBI chr11:22,523,671...22,541,473
Ensembl chr11:22,525,051...22,540,388
JBrowse link
sperm capacitation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABHD2 abhydrolase domain containing 2, acylglycerol lipase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:52,151,500...52,255,024
Ensembl chr 3:52,151,535...52,249,612
JBrowse link
G BSPH1 binder of sperm protein homolog 1 ISO (MGI:5465085|PMID:22539676) MGI PMID:22539676 MGI:5465085 NCBI chr 1:108,187,315...108,207,096 JBrowse link
G CABYR calcium binding tyrosine phosphorylation regulated IEA InterPro GO_REF:0000002 NCBI chr 7:64,223,591...64,239,362
Ensembl chr 7:64,223,579...64,239,277
JBrowse link
G CATSPER2 cation channel sperm associated 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr30:10,471,798...10,487,948
Ensembl chr30:10,471,814...10,487,739
JBrowse link
G CATSPER3 cation channel sperm associated 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:23,018,770...23,057,945
Ensembl chr11:23,021,663...23,052,820
JBrowse link
G CATSPER4 cation channel sperm associated 4 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:73,789,706...73,804,463
Ensembl chr 2:73,789,707...73,804,373
JBrowse link
G CATSPERD cation channel sperm associated auxiliary subunit delta ISO (MGI:5315675|PMID:21224844) UniProt PMID:21224844 MGI:5315675 NCBI chr20:54,260,014...54,312,504
Ensembl chr20:54,260,046...54,312,277
JBrowse link
G CATSPERZ catsper channel auxiliary subunit zeta IEA InterPro GO_REF:0000002 NCBI chr18:52,763,714...52,766,857 JBrowse link
G CFTR CF transmembrane conductance regulator ISS UniProtKB GO_REF:0000024 NCBI chr14:56,290,417...56,452,919
Ensembl chr14:56,290,275...56,453,977
JBrowse link
G DLD dihydrolipoamide dehydrogenase IEA Ensembl GO_REF:0000107 NCBI chr18:12,703,340...12,734,408
Ensembl chr18:12,703,341...12,734,479
JBrowse link
G EFCAB9 EF-hand calcium binding domain 9 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:40,055,027...40,076,789
Ensembl chr 4:40,055,159...40,076,729
JBrowse link
G ELSPBP1 epididymal sperm binding protein 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:108,159,609...108,187,224
Ensembl chr 1:108,159,611...108,188,076
JBrowse link
G LOC111097660 binder of sperm protein homolog 2-like IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:108,212,653...108,221,586 JBrowse link
G PCSK4 proprotein convertase subtilisin/kexin type 4 IEA Ensembl GO_REF:0000107 NCBI chr20:57,370,035...57,376,207
Ensembl chr20:57,369,328...57,375,590
JBrowse link
G PEBP1 phosphatidylethanolamine binding protein 1 IEA Ensembl GO_REF:0000107 NCBI chr26:14,522,124...14,526,370
Ensembl chr26:14,500,074...14,529,354
JBrowse link
G PRKACA protein kinase cAMP-activated catalytic subunit alpha IEA Ensembl GO_REF:0000107 NCBI chr20:48,416,730...48,425,237
Ensembl chr20:48,409,045...48,426,669
JBrowse link
G ROPN1 rhophilin associated tail protein 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr33:27,021,990...27,056,675 JBrowse link
G ROPN1L rhophilin associated tail protein 1 like IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr34:3,857,643...3,875,059
Ensembl chr34:3,857,641...3,875,190
JBrowse link
G SEPTIN4 septin 4 IEA Ensembl GO_REF:0000107 NCBI chr 9:33,138,167...33,162,212
Ensembl chr 9:33,138,165...33,157,996
JBrowse link
G SLC26A3 solute carrier family 26 member 3 IEA Ensembl GO_REF:0000107 NCBI chr18:12,817,177...12,843,502
Ensembl chr18:12,808,806...12,843,076
JBrowse link
G SLC26A8 solute carrier family 26 member 8 IEA InterPro GO_REF:0000002 NCBI chr12:5,059,267...5,145,387
Ensembl chr12:5,060,306...5,135,677
JBrowse link
G SPINK1 serine peptidase inhibitor Kazal type 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:42,112,015...42,120,738
Ensembl chr 2:42,112,016...42,120,706
JBrowse link
sperm chromatin condensation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FSHR follicle stimulating hormone receptor ISO (MGI:1855818|PMID:10775161) MGI PMID:10775161 MGI:1855818 NCBI chr10:50,765,591...50,938,643
Ensembl chr10:50,770,995...50,938,474
JBrowse link
G H1-7 H1.7 linker histone ISO (MGI:3531623|PMID:15710904) UniProt PMID:15710904 MGI:3531623 NCBI chr27:6,389,797...6,396,021
Ensembl chr27:6,389,908...6,391,174
JBrowse link
G LOC102152531 synaptonemal complex protein 3-like ISO (MGI:5315075|PMID:22164254) MGI PMID:22164254 MGI:5315075 NCBI chr  X:121,060,275...121,074,166 JBrowse link
G SELENOF selenoprotein F ISO RGD PMID:11344099 RGD:728803 NCBI chr 6:61,299,310...61,341,035
Ensembl chr 6:61,299,310...61,341,035
JBrowse link
G SYCP1 synaptonemal complex protein 1 IEA Ensembl GO_REF:0000107 NCBI chr17:52,538,909...52,681,495
Ensembl chr17:52,539,615...52,648,133
JBrowse link
G TSSK6 testis specific serine kinase 6 IEA Ensembl GO_REF:0000107 NCBI chr20:43,730,769...43,732,179
Ensembl chr20:43,730,907...43,731,728
JBrowse link
sperm individualization term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SPEM1 spermatid maturation 1 IEA Ensembl GO_REF:0000107 NCBI chr 5:32,354,044...32,357,684
Ensembl chr 5:32,354,153...32,355,401
JBrowse link
spermatid nucleus differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGFG1 ArfGAP with FG repeats 1 IEA Ensembl GO_REF:0000107 NCBI chr25:40,229,732...40,307,277
Ensembl chr25:40,243,734...40,301,135
JBrowse link
G GOPC golgi associated PDZ and coiled-coil motif containing IEA Ensembl GO_REF:0000107 NCBI chr 1:57,790,118...57,829,022
Ensembl chr 1:57,792,647...57,828,820
JBrowse link
G HMGB2 high mobility group box 2 IEA Ensembl GO_REF:0000107 NCBI chr25:23,939,024...23,941,720
Ensembl chr25:23,939,027...23,941,606
JBrowse link
G MFSD14A major facilitator superfamily domain containing 14A IEA Ensembl GO_REF:0000107 NCBI chr 6:49,902,739...49,927,631
Ensembl chr 6:49,903,484...49,927,638
JBrowse link
G NECTIN2 nectin cell adhesion molecule 2 IEA Ensembl GO_REF:0000107 NCBI chr 1:110,543,140...110,569,168
Ensembl chr 1:110,543,247...110,569,143
JBrowse link
G PYGO1 pygopus family PHD finger 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr30:20,889,246...20,919,512
Ensembl chr30:20,895,785...20,919,863
JBrowse link
G PYGO2 pygopus family PHD finger 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:42,509,760...42,513,744
Ensembl chr 7:42,509,968...42,512,091
JBrowse link
G TBPL1 TATA-box binding protein like 1 ISO (MGI:3701727|PMID:16765935) MGI PMID:16765935 MGI:3701727 NCBI chr 1:26,898,344...26,938,452
Ensembl chr 1:26,899,859...26,936,995
JBrowse link
G TMF1 TATA element modulatory factor 1 IEA Ensembl GO_REF:0000107 NCBI chr20:22,684,150...22,716,107
Ensembl chr20:22,684,159...22,714,432
JBrowse link
spermatid nucleus elongation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DMRTC2 DMRT like family C2 IEA Ensembl GO_REF:0000107 NCBI chr 1:112,434,046...112,439,712
Ensembl chr 1:112,434,485...112,439,088
JBrowse link
G H1-7 H1.7 linker histone ISO (MGI:3531623|PMID:15710904) UniProt PMID:15710904 MGI:3531623 NCBI chr27:6,389,797...6,396,021
Ensembl chr27:6,389,908...6,391,174
JBrowse link
G IFT88 intraflagellar transport 88 ISO (MGI:4939808|PMID:21337470) MGI PMID:21337470 MGI:4939808 NCBI chr25:17,414,965...17,551,405
Ensembl chr25:17,414,965...17,551,266
JBrowse link
G KDM3A lysine demethylase 3A IEA Ensembl GO_REF:0000107 NCBI chr17:38,690,962...38,744,507
Ensembl chr17:38,690,979...38,743,739
JBrowse link
G TNP1 transition protein 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr37:23,742,875...23,743,417
Ensembl chr37:23,727,538...23,743,365
JBrowse link
spermatogenesis, exchange of chromosomal proteins term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHD5 chromodomain helicase DNA binding protein 5 ISO (MGI:5559810|PMID:24252660) UniProt PMID:24252660 MGI:5559810 NCBI chr 5:60,022,451...60,080,663
Ensembl chr 5:60,025,602...60,081,148
JBrowse link
G FSHR follicle stimulating hormone receptor IEA Ensembl GO_REF:0000107 NCBI chr10:50,765,591...50,938,643
Ensembl chr10:50,770,995...50,938,474
JBrowse link
G H2BC1 H2B clustered histone 1 ISO (MGI:5502464|PMID:23884607) UniProt PMID:23884607 MGI:5502464 NCBI chr35:23,677,952...23,678,432 JBrowse link
G LOC102152531 synaptonemal complex protein 3-like ISO (PMID:14643120) UniProtKB PMID:14643120 NCBI chr  X:121,060,275...121,074,166 JBrowse link
G PIWIL1 piwi like RNA-mediated gene silencing 1 IEA Ensembl GO_REF:0000107 NCBI chr26:1,760,544...1,791,204
Ensembl chr26:1,761,149...1,791,185
JBrowse link
G PSME4 proteasome activator subunit 4 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:54,873,093...54,960,030
Ensembl chr10:54,875,177...54,960,035
JBrowse link
G RNF8 ring finger protein 8 ISO (MGI:5905675|PMID:28552346) UniProt PMID:28552346 MGI:5905675 NCBI chr12:6,380,365...6,415,407
Ensembl chr12:6,292,459...6,415,382
JBrowse link
G TNP1 transition protein 1 IEA Ensembl GO_REF:0000107 NCBI chr37:23,742,875...23,743,417
Ensembl chr37:23,727,538...23,743,365
JBrowse link
G TNP2 transition protein 2 ISS UniProtKB GO_REF:0000024 NCBI chr 6:31,498,361...31,498,740
Ensembl chr 6:31,426,715...31,499,842
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16190
    cellular process 15467
      cellular process involved in reproduction in multicellular organism 427
        germ cell development 310
          spermatid development 182
            Nebenkern assembly 0
            acrosome assembly + 20
            intramanchette transport 1
            manchette assembly 4
            manchette disassembly 1
            sperm axoneme assembly 25
            sperm capacitation + 28
            sperm individualization 1
            spermatid nucleus differentiation + 25
Path 2
Term Annotations click to browse term
  biological_process 16190
    reproduction 1596
      reproductive process 1594
        multi-organism reproductive process 1065
          sexual reproduction 857
            gamete generation 695
              male gamete generation 532
                spermatogenesis 511
                  spermatid differentiation 190
                    spermatid development 182
                      Nebenkern assembly 0
                      acrosome assembly + 20
                      intramanchette transport 1
                      manchette assembly 4
                      manchette disassembly 1
                      sperm axoneme assembly 25
                      sperm capacitation + 28
                      sperm individualization 1
                      spermatid nucleus differentiation + 25
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.