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ONTOLOGY REPORT - ANNOTATIONS


Term:spermatid development
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Accession:GO:0007286 term browser browse the term
Definition:The process whose specific outcome is the progression of a spermatid over time, from its formation to the mature structure.
Synonyms:exact_synonym: spermatid cell development;   spermiogenesis
 xref: Wikipedia:Spermiogenesis


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spermatid development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACRBP acrosin binding protein ISS UniProt GO_REF:0000024 NCBI chr12:6,638,075...6,647,432
Ensembl chr12:6,638,075...6,647,433
JBrowse link
G ADAD1 adenosine deaminase domain containing 1 IEA Ensembl GO_REF:0000107 NCBI chr 4:122,378,971...122,429,815
Ensembl chr 4:122,378,966...122,429,802
JBrowse link
G ADRM1 adhesion regulating molecule 1 ISO (MGI:4849324|PMID:21048919) BHF-UCL PMID:21048919 MGI:4849324 NCBI chr20:62,302,061...62,308,862
Ensembl chr20:62,302,093...62,308,862
JBrowse link
G AFF4 AF4/FMR2 family member 4 IEA Ensembl GO_REF:0000107 NCBI chr 5:132,875,381...132,963,655
Ensembl chr 5:132,875,395...132,963,634
JBrowse link
G ALMS1 ALMS1 centrosome and basal body associated protein ISO (MGI:3639060|PMID:16513793)
(MGI:3698928|PMID:17206865)
MGI PMID:16513793, PMID:17206865 MGI:3639060, MGI:3698928 NCBI chr 2:73,385,758...73,609,919
Ensembl chr 2:73,385,758...73,625,166
JBrowse link
G BBS4 Bardet-Biedl syndrome 4 ISS BHF-UCL GO_REF:0000024 NCBI chr15:72,686,204...72,738,476
Ensembl chr15:72,686,179...72,738,475
JBrowse link
G BRIP1 BRCA1 interacting protein C-terminal helicase 1 IEA Ensembl GO_REF:0000107 NCBI chr17:61,679,139...61,864,120
Ensembl chr17:61,679,139...61,863,528
Ensembl chr17:61,679,139...61,863,528
JBrowse link
G CAPZA3 capping actin protein of muscle Z-line subunit alpha 3 IEA Ensembl GO_REF:0000107 NCBI chr12:18,738,119...18,739,188
Ensembl chr12:18,738,119...18,739,188
JBrowse link
G CCDC42 coiled-coil domain containing 42 ISS UniProtKB GO_REF:0000024 NCBI chr17:8,729,935...8,744,836
Ensembl chr17:8,729,935...8,745,219
JBrowse link
G CCDC63 coiled-coil domain containing 63 ISS UniProtKB GO_REF:0000024 NCBI chr12:110,844,489...110,907,535
Ensembl chr12:110,846,769...110,907,535
JBrowse link
G CCNB1IP1 cyclin B1 interacting protein 1 IEA Ensembl GO_REF:0000107 NCBI chr14:20,311,370...20,333,279
Ensembl chr14:20,311,368...20,333,312
JBrowse link
G CDYL chromodomain Y like ISS UniProtKB GO_REF:0000024 NCBI chr 6:4,706,138...4,955,544
Ensembl chr 6:4,706,159...4,955,551
JBrowse link
G CELF1 CUGBP Elav-like family member 1 IEA Ensembl GO_REF:0000107 NCBI chr11:47,465,937...47,565,539
Ensembl chr11:47,465,933...47,565,569
JBrowse link
G CEP131 centrosomal protein 131 ISO (MGI:77572|PMID:8529672)
(MGI:5647985|PMID:24415959)
MGI PMID:8529672, PMID:24415959 MGI:5647985, MGI:77572 NCBI chr17:81,189,595...81,222,989
Ensembl chr17:81,189,593...81,222,999
JBrowse link
G CEP57 centrosomal protein 57 ISS (PMID:12954732) HGNC PMID:12954732 NCBI chr11:95,790,471...95,832,693
Ensembl chr11:95,789,965...95,832,693
JBrowse link
G CIB1 calcium and integrin binding 1 ISS UniProtKB GO_REF:0000024 NCBI chr15:90,229,975...90,265,759
Ensembl chr15:90,229,975...90,234,047
JBrowse link
G DDIAS DNA damage induced apoptosis suppressor ISO (MGI:3718924|PMID:17515607) MGI PMID:17515607 MGI:3718924 NCBI chr11:82,901,735...82,934,659
Ensembl chr11:82,899,975...82,958,277
JBrowse link
G DDX25 DEAD-box helicase 25 ISS UniProtKB GO_REF:0000024 NCBI chr11:125,903,328...125,928,843
Ensembl chr11:125,903,348...125,943,702
JBrowse link
G DHH desert hedgehog signaling molecule IEA Ensembl GO_REF:0000107 NCBI chr12:49,086,656...49,094,801
Ensembl chr12:49,086,656...49,094,801
JBrowse link
G DMC1 DNA meiotic recombinase 1 IEA Ensembl GO_REF:0000107 NCBI chr22:38,509,154...38,570,286
Ensembl chr22:38,518,948...38,570,204
JBrowse link
G DPY19L2 dpy-19 like 2 IEA
IBA
IMP
(PMID:21873635)
(PMID:21397063), (PMID:21397064)
InterPro
GO_Central
UniProtKB
PMID:21397063, PMID:21397064, PMID:21873635 GO_REF:0000002 NCBI chr12:63,558,913...63,669,201
Ensembl chr12:63,558,913...63,668,939
JBrowse link
G DPY19L2P1 DPY19L2 pseudogene 1 IEA InterPro GO_REF:0000002 NCBI chr 7:35,081,287...35,186,162
Ensembl chr 7:35,079,989...35,186,041
JBrowse link
G DPY19L2P2 DPY19L2 pseudogene 2 IEA InterPro GO_REF:0000002 NCBI chr 7:103,175,013...103,280,466
Ensembl chr 7:103,175,133...103,280,410
JBrowse link
G DYNC1H1 dynein cytoplasmic 1 heavy chain 1 ISO RGD PMID:8006076 RGD:13207350 NCBI chr14:101,964,573...102,056,443
Ensembl chr14:101,964,573...102,056,443
JBrowse link
G DYNLL1 dynein light chain LC8-type 1 ISO RGD PMID:15983119 RGD:13208521 NCBI chr12:120,469,842...120,498,493
Ensembl chr12:120,469,850...120,498,493
JBrowse link
G EHMT2 euchromatic histone lysine methyltransferase 2 ISO (MGI:3717933|PMID:17599069) MGI PMID:17599069 MGI:3717933 NCBI chr 6:31,879,759...31,897,698
Ensembl chr 6:31,879,759...31,897,687
JBrowse link
G FAM9A family with sequence similarity 9 member A IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:8,790,795...8,801,383
Ensembl chr  X:8,790,795...8,801,383
JBrowse link
G FAM9B family with sequence similarity 9 member B IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:9,024,232...9,034,127
Ensembl chr  X:9,024,232...9,295,682
JBrowse link
G FAM9C family with sequence similarity 9 member C IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:13,035,617...13,044,793
Ensembl chr  X:13,035,617...13,044,682
JBrowse link
G FANCG FA complementation group G IEA Ensembl GO_REF:0000107 NCBI chr 9:35,073,839...35,079,942
Ensembl chr 9:35,073,835...35,080,016
Ensembl chr 9:35,073,835...35,080,016
JBrowse link
G FNDC3A fibronectin type III domain containing 3A IEA Ensembl GO_REF:0000107 NCBI chr13:48,975,241...49,209,779
Ensembl chr13:48,975,912...49,209,779
JBrowse link
G FSCN3 fascin actin-bundling protein 3 IEA InterPro GO_REF:0000002 NCBI chr 7:127,593,736...127,602,144
Ensembl chr 7:127,591,409...127,602,144
JBrowse link
G FSHR follicle stimulating hormone receptor ISO (MGI:2137997|PMID:11466221), (MGI:3797480|PMID:15973687) MGI PMID:11466221, PMID:15973687 MGI:2137997, MGI:3797480 NCBI chr 2:48,953,161...49,154,527
Ensembl chr 2:48,962,157...49,154,527
Ensembl chr 2:48,962,157...49,154,527
JBrowse link
G GALNTL5 polypeptide N-acetylgalactosaminyltransferase like 5 IMP
IBA
(PMID:24398516)
(PMID:21873635)
UniProtKB
GO_Central
PMID:21873635, PMID:24398516 NCBI chr 7:151,956,406...152,019,929
Ensembl chr 7:151,956,379...152,019,929
JBrowse link
G GAPDHS glyceraldehyde-3-phosphate dehydrogenase, spermatogenic ISO RGD PMID:17375205 RGD:2301985 NCBI chr19:35,533,456...35,545,319
Ensembl chr19:35,533,455...35,545,319
JBrowse link
G H3-3A H3.3 histone A IEA Ensembl GO_REF:0000107 NCBI chr 1:226,061,831...226,072,019
Ensembl chr 1:226,061,851...226,073,212
Ensembl chr 1:226,061,851...226,073,212
JBrowse link
G H3-3B H3.3 histone B IEA Ensembl GO_REF:0000107 NCBI chr17:75,776,434...75,779,779
Ensembl chr17:75,776,434...75,785,893
JBrowse link
G HOOK1 hook microtubule tethering protein 1 ISO (MGI:2180892|PMID:12075009) MGI PMID:12075009 MGI:2180892 NCBI chr 1:59,814,922...59,876,370
Ensembl chr 1:59,814,786...59,876,322
Ensembl chr 1:59,814,786...59,876,322
JBrowse link
G HSPA2 heat shock protein family A (Hsp70) member 2 IEA Ensembl GO_REF:0000107 NCBI chr14:64,535,905...64,543,237
Ensembl chr14:64,535,905...64,546,173
JBrowse link
G ICA1L islet cell autoantigen 1 like IEA Ensembl GO_REF:0000107 NCBI chr 2:202,773,176...202,871,766
Ensembl chr 2:202,773,150...202,871,985
JBrowse link
G ING2 inhibitor of growth family member 2 ISS (PMID:21124965) BHF-UCL PMID:21124965 NCBI chr 4:183,505,058...183,512,429
Ensembl chr 4:183,505,058...183,512,429
JBrowse link
G INSL6 insulin like 6 ISO (MGI:4430687|PMID:19520787) MGI PMID:19520787 MGI:4430687 NCBI chr 9:4,992,409...5,185,707
Ensembl chr 9:5,123,880...5,185,647
JBrowse link
G IQCG IQ motif containing G ISS UniProtKB GO_REF:0000024 NCBI chr 3:197,889,077...197,960,111
Ensembl chr 3:197,889,077...197,960,142
JBrowse link
G JAM2 junctional adhesion molecule 2 ISS UniProt GO_REF:0000024 NCBI chr21:25,607,550...25,717,562
Ensembl chr21:25,639,258...25,717,562
JBrowse link
G JAM3 junctional adhesion molecule 3 IEA Ensembl GO_REF:0000107 NCBI chr11:134,069,072...134,152,001
Ensembl chr11:134,069,071...134,152,001
JBrowse link
G KIT KIT proto-oncogene, receptor tyrosine kinase IEA Ensembl GO_REF:0000107 NCBI chr 4:54,657,957...54,740,715
Ensembl chr 4:54,657,918...54,740,715
JBrowse link
G KLHL10 kelch like family member 10 IEA Ensembl GO_REF:0000107 NCBI chr17:41,835,685...41,848,384
Ensembl chr17:41,835,685...41,848,384
JBrowse link
G MEI1 meiotic double-stranded break formation protein 1 IEA Ensembl GO_REF:0000107 NCBI chr22:41,699,503...41,799,477
Ensembl chr22:41,699,503...41,799,456
JBrowse link
G MEIOC meiosis specific with coiled-coil domain ISS UniProtKB GO_REF:0000024 NCBI chr17:44,656,417...44,677,086
Ensembl chr17:44,656,404...44,690,308
JBrowse link
G MFSD14A major facilitator superfamily domain containing 14A ISO (MGI:5763056|PMID:27107036) MGI PMID:27107036 MGI:5763056 NCBI chr 1:100,038,078...100,083,377
Ensembl chr 1:100,038,095...100,083,377
JBrowse link
G MKKS McKusick-Kaufman syndrome ISS BHF-UCL GO_REF:0000024 NCBI chr20:10,401,009...10,434,222
Ensembl chr20:10,420,546...10,420,737
Ensembl chr20:10,420,546...10,420,737
JBrowse link
G NECTIN2 nectin cell adhesion molecule 2 ISS BHF-UCL GO_REF:0000024 NCBI chr19:44,846,297...44,889,223
Ensembl chr19:44,846,175...44,889,223
JBrowse link
G NECTIN3 nectin cell adhesion molecule 3 IEA InterPro GO_REF:0000002 NCBI chr 3:111,071,764...111,201,444
Ensembl chr 3:111,070,071...111,275,563
JBrowse link
G NME5 NME/NM23 family member 5 ISS UniProtKB GO_REF:0000024 NCBI chr 5:138,115,175...138,139,471
Ensembl chr 5:138,115,175...138,139,443
JBrowse link
G NSUN2 NOP2/Sun RNA methyltransferase 2 IEA Ensembl GO_REF:0000107 NCBI chr 5:6,599,239...6,633,044
Ensembl chr 5:6,599,239...6,633,291
JBrowse link
G NUP210L nucleoporin 210 like IEA Ensembl GO_REF:0000107 NCBI chr 1:153,992,582...154,155,116
Ensembl chr 1:153,992,685...154,155,116
JBrowse link
G OCA2 OCA2 melanosomal transmembrane protein IEA Ensembl GO_REF:0000107 NCBI chr15:27,719,008...28,099,342
Ensembl chr15:27,754,875...28,099,315
JBrowse link
G ODF2 outer dense fiber of sperm tails 2 IEA Ensembl GO_REF:0000107 NCBI chr 9:128,455,185...128,501,292
Ensembl chr 9:128,455,186...128,501,292
JBrowse link
G OSBP2 oxysterol binding protein 2 IEA Ensembl GO_REF:0000107 NCBI chr22:30,693,782...30,907,813
Ensembl chr22:30,693,782...30,907,824
JBrowse link
G PACRG parkin coregulated IEA Ensembl GO_REF:0000107 NCBI chr 6:162,726,870...163,315,500
Ensembl chr 6:162,727,132...163,315,492
JBrowse link
G PANK2 pantothenate kinase 2 IEA Ensembl GO_REF:0000107 NCBI chr20:3,888,781...3,929,887
Ensembl chr20:3,888,839...3,929,882
JBrowse link
G PDILT protein disulfide isomerase like, testis expressed IEA Ensembl GO_REF:0000107 NCBI chr16:20,359,171...20,404,742
Ensembl chr16:20,359,175...20,404,737
JBrowse link
G PEBP1 phosphatidylethanolamine binding protein 1 ISO RGD PMID:9508097 RGD:1357207 NCBI chr12:118,136,124...118,145,584
Ensembl chr12:118,136,124...118,145,584
JBrowse link
G PITHD1 PITH domain containing 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:23,778,417...23,788,232
Ensembl chr 1:23,778,418...23,788,232
JBrowse link
G PIWIL1 piwi like RNA-mediated gene silencing 1 IEA
ISS
IMP
(PMID:28552346) InterPro
UniProtKB
PMID:28552346 GO_REF:0000002, GO_REF:0000024 NCBI chr12:130,337,887...130,412,708
Ensembl chr12:130,337,887...130,372,637
JBrowse link
G PLD6 phospholipase D family member 6 ISS UniProtKB GO_REF:0000024 NCBI chr17:17,200,990...17,206,905
Ensembl chr17:17,200,995...17,206,333
JBrowse link
G PPP2R2B protein phosphatase 2 regulatory subunit Bbeta ISO RGD PMID:8389301 RGD:633587 NCBI chr 5:146,580,742...147,081,520
Ensembl chr 5:146,581,146...147,084,784
JBrowse link
G PRKG1 protein kinase cGMP-dependent 1 ISO RGD PMID:15713832 RGD:1599621 NCBI chr10:50,990,888...52,298,350
Ensembl chr10:50,990,888...52,298,423
JBrowse link
G PRM1 protamine 1 ISO (MGI:1934083|PMID:11326282) MGI PMID:11326282 MGI:1934083 NCBI chr16:11,280,841...11,281,330
Ensembl chr16:11,280,841...11,281,330
JBrowse link
G PRM2 protamine 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:11,275,639...11,276,480
Ensembl chr16:11,275,639...11,276,480
JBrowse link
G PTCHD3 patched domain containing 3 NAS (PMID:17904097) UniProtKB PMID:17904097 NCBI chr10:27,398,188...27,414,347
Ensembl chr10:27,397,121...27,414,368
JBrowse link
G PYGO1 pygopus family PHD finger 1 ISO (MGI:5498404|PMID:23637336) MGI PMID:23637336 MGI:5498404 NCBI chr15:55,538,884...55,588,971
Ensembl chr15:55,538,890...55,588,947
JBrowse link
G PYGO2 pygopus family PHD finger 2 ISO (MGI:5498404|PMID:23637336) MGI PMID:23637336 MGI:5498404 NCBI chr 1:154,957,026...154,961,782
Ensembl chr 1:154,957,026...154,963,853
JBrowse link
G QKI QKI, KH domain containing RNA binding IEA Ensembl GO_REF:0000107 NCBI chr 6:163,414,486...163,578,592
Ensembl chr 6:163,414,000...163,578,592
JBrowse link
G RAN RAN, member RAS oncogene family ISO RGD PMID:12211070 RGD:727421 NCBI chr12:130,871,879...130,877,678
Ensembl chr12:130,872,037...130,877,678
JBrowse link
G REC8 REC8 meiotic recombination protein IEA Ensembl GO_REF:0000107 NCBI chr14:24,171,931...24,180,408
Ensembl chr14:24,171,853...24,180,257
JBrowse link
G RFX2 regulatory factor X2 ISS UniProtKB GO_REF:0000024 NCBI chr19:5,993,164...6,110,601
Ensembl chr19:5,993,164...6,199,572
JBrowse link
G RIMBP3 RIMS binding protein 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr22:18,605,815...18,611,919
Ensembl chr22:18,605,815...18,611,919
JBrowse link
G RIMBP3B RIMS binding protein 3B IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr22:21,383,751...21,389,169
Ensembl chr22:21,383,374...21,389,478
JBrowse link
G RIMBP3C RIMS binding protein 3C IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr22:21,545,666...21,551,461
Ensembl chr22:21,545,357...21,551,461
JBrowse link
G RNF17 ring finger protein 17 IEA Ensembl GO_REF:0000107 NCBI chr13:24,747,641...24,888,816
Ensembl chr13:24,764,169...24,879,921
JBrowse link
G RNF8 ring finger protein 8 ISS UniProtKB GO_REF:0000024 NCBI chr 6:37,353,983...37,394,734
Ensembl chr 6:37,353,979...37,394,734
JBrowse link
G RSPH1 radial spoke head component 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr21:42,472,486...42,496,246
Ensembl chr21:42,472,486...42,496,246
JBrowse link
G SBF1 SET binding factor 1 ISO RGD PMID:27335132 RGD:38549340 NCBI chr22:50,445,000...50,475,035
Ensembl chr22:50,445,000...50,475,035
JBrowse link
G SEC23IP SEC23 interacting protein ISO (MGI:5052222|PMID:21640725) MGI PMID:21640725 MGI:5052222 NCBI chr10:119,892,696...119,944,657
Ensembl chr10:119,892,730...119,944,657
JBrowse link
G SEPTIN4 septin 4 ISO (MGI:3531234|PMID:15737931) MGI PMID:15737931 MGI:3531234 NCBI chr17:58,520,255...58,544,372
Ensembl chr17:58,520,250...58,544,368
JBrowse link
G SIX5 SIX homeobox 5 IEA Ensembl GO_REF:0000107 NCBI chr19:45,764,785...45,769,252
Ensembl chr19:45,764,785...45,769,252
JBrowse link
G SLIRP SRA stem-loop interacting RNA binding protein IEA Ensembl GO_REF:0000107 NCBI chr14:77,708,071...77,717,598
Ensembl chr14:77,708,071...77,761,104
JBrowse link
G SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 IEA Ensembl GO_REF:0000107 NCBI chr 9:2,015,347...2,193,624
Ensembl chr 9:1,980,290...2,193,624
JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 ISO RGD PMID:22215678 RGD:9586361 NCBI chr19:10,960,999...11,062,277
Ensembl chr19:10,960,932...11,079,426
Ensembl chr19:10,960,932...11,079,426
JBrowse link
G SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 ISO RGD PMID:22215678 RGD:9586361 NCBI chr17:40,624,962...40,647,818
Ensembl chr17:40,624,962...40,648,654
JBrowse link
G SOX30 SRY-box transcription factor 30 ISS UniProt GO_REF:0000024 NCBI chr 5:157,625,679...157,671,480
Ensembl chr 5:157,625,679...157,671,480
JBrowse link
G SPANXB1 SPANX family member B1 NAS (PMID:10906052) UniProtKB PMID:10906052 NCBI chr  X:141,002,594...141,003,706
Ensembl chr  X:141,002,594...141,003,706
JBrowse link
G SPINK2 serine peptidase inhibitor Kazal type 2 IMP
IEA
(PMID:28554943) UniProt
InterPro
PMID:28554943 GO_REF:0000002 NCBI chr 4:56,809,860...56,822,210
Ensembl chr 4:56,809,860...56,821,742
JBrowse link
G SPO11 SPO11 initiator of meiotic double stranded breaks IEA Ensembl GO_REF:0000107 NCBI chr20:57,329,757...57,343,993
Ensembl chr20:57,329,803...57,343,994
JBrowse link
G STK11 serine/threonine kinase 11 ISO (MGI:3829517|PMID:18774945) UniProt PMID:18774945 MGI:3829517 NCBI chr19:1,205,778...1,228,431
Ensembl chr19:1,177,558...1,228,431
Ensembl chr19:1,177,558...1,228,431
JBrowse link
G STRBP spermatid perinuclear RNA binding protein IEA Ensembl GO_REF:0000107 NCBI chr 9:123,109,494...123,268,586
Ensembl chr 9:123,109,500...123,268,586
JBrowse link
G SUN5 Sad1 and UNC84 domain containing 5 ISS UniProtKB GO_REF:0000024 NCBI chr20:32,983,773...33,004,449
Ensembl chr20:32,983,773...33,004,433
JBrowse link
G SYCP3 synaptonemal complex protein 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:101,728,648...101,739,721
Ensembl chr12:101,728,648...101,739,472
JBrowse link
G TAF7L TATA-box binding protein associated factor 7 like ISO (MGI:3709925|PMID:17242199) MGI PMID:17242199 MGI:3709925 NCBI chr  X:101,268,257...101,293,083
Ensembl chr  X:101,268,253...101,293,057
JBrowse link
G TARBP2 TARBP2 subunit of RISC loading complex IEA Ensembl GO_REF:0000107 NCBI chr12:53,500,923...53,506,431
Ensembl chr12:53,500,921...53,506,431
JBrowse link
G TDRD5 tudor domain containing 5 ISS UniProtKB GO_REF:0000024 NCBI chr 1:179,591,613...179,691,272
Ensembl chr 1:179,591,613...179,691,272
JBrowse link
G TMF1 TATA element modulatory factor 1 ISO (MGI:4849617|PMID:20691678)
(MGI:5469555|PMID:23000399)
MGI PMID:20691678, PMID:23000399 MGI:4849617, MGI:5469555 NCBI chr 3:69,019,827...69,052,333
Ensembl chr 3:69,019,827...69,052,339
JBrowse link
G TNK2 tyrosine kinase non receptor 2 ISO (MGI:6246359|PMID:23562806) UniProt PMID:23562806 MGI:6246359 NCBI chr 3:195,863,364...195,908,551
Ensembl chr 3:195,863,364...195,911,945
JBrowse link
G TNP1 transition protein 1 IDA (PMID:12743712) UniProtKB PMID:12743712 NCBI chr 2:216,859,458...216,860,064
Ensembl chr 2:216,859,458...216,860,064
JBrowse link
G TOPAZ1 testis and ovary specific PAZ domain containing 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:44,241,886...44,337,071
Ensembl chr 3:44,241,886...44,332,098
JBrowse link
G TRIP13 thyroid hormone receptor interactor 13 IEA Ensembl GO_REF:0000107 NCBI chr 5:892,884...919,348
Ensembl chr 5:892,884...919,357
JBrowse link
G TSSK1B testis specific serine kinase 1B ISS UniProtKB GO_REF:0000024 NCBI chr 5:113,432,553...113,434,989
Ensembl chr 5:113,432,553...113,434,989
JBrowse link
G TSSK2 testis specific serine kinase 2 ISS UniProtKB GO_REF:0000024 NCBI chr22:19,131,308...19,132,622
Ensembl chr22:19,131,308...19,132,622
JBrowse link
G TSSK4 testis specific serine kinase 4 IEA Ensembl GO_REF:0000107 NCBI chr14:24,205,524...24,208,362
Ensembl chr14:24,205,696...24,208,362
JBrowse link
G TTC21A tetratricopeptide repeat domain 21A IMP (PMID:30929735) UniProt PMID:30929735 NCBI chr 3:39,107,680...39,139,009
Ensembl chr 3:39,107,704...39,138,903
JBrowse link
G TTC26 tetratricopeptide repeat domain 26 ISO (MGI:3040715|PMID:7317942) MGI PMID:7317942 MGI:3040715 NCBI chr 7:139,133,778...139,191,986
Ensembl chr 7:139,133,744...139,191,986
JBrowse link
G UBE2J1 ubiquitin conjugating enzyme E2 J1 IEA Ensembl GO_REF:0000107 NCBI chr 6:89,326,625...89,353,155
Ensembl chr 6:89,326,625...89,352,722
JBrowse link
G YBX2 Y-box binding protein 2 ISO (MGI:3576442|PMID:15824319), (MGI:3696301|PMID:17035640) MGI PMID:15824319, PMID:17035640 MGI:3576442, MGI:3696301 NCBI chr17:7,288,254...7,294,639
Ensembl chr17:7,288,263...7,294,639
JBrowse link
G YTHDC2 YTH domain containing 2 ISS UniProtKB GO_REF:0000024 NCBI chr 5:113,513,683...113,595,284
Ensembl chr 5:113,513,694...113,595,285
JBrowse link
G ZFP42 ZFP42 zinc finger protein ISO (MGI:5285464|PMID:21641340) MGI PMID:21641340 MGI:5285464 NCBI chr 4:187,994,044...188,005,046
Ensembl chr 4:187,995,771...188,005,046
JBrowse link
G ZMYND15 zinc finger MYND-type containing 15 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:4,739,833...4,746,119
Ensembl chr17:4,739,833...4,746,119
JBrowse link
acrosome assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACRBP acrosin binding protein ISS UniProt GO_REF:0000024 NCBI chr12:6,638,075...6,647,432
Ensembl chr12:6,638,075...6,647,433
JBrowse link
G AGFG1 ArfGAP with FG repeats 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:227,472,156...227,561,217
Ensembl chr 2:227,472,152...227,561,214
JBrowse link
G CCDC136 coiled-coil domain containing 136 ISS UniProtKB GO_REF:0000024 NCBI chr 7:128,790,762...128,822,130
Ensembl chr 7:128,790,757...128,822,132
JBrowse link
G CHN2 chimerin 2 ISO RGD PMID:8440677 RGD:724725 NCBI chr 7:29,146,547...29,514,335
Ensembl chr 7:29,122,340...29,514,667
Ensembl chr 7:29,122,340...29,514,667
JBrowse link
G FABP9 fatty acid binding protein 9 IEA Ensembl GO_REF:0000107 NCBI chr 8:81,458,253...81,461,579
Ensembl chr 8:81,458,253...81,461,579
Ensembl chr 8:81,458,253...81,461,579
JBrowse link
G KIAA0319L KIAA0319 like ISO (MGI:6198830|PMID:29991750) MGI PMID:29991750 MGI:6198830 NCBI chr 1:35,433,490...35,557,603
Ensembl chr 1:35,433,492...35,557,950
JBrowse link
G KNL1 kinetochore scaffold 1 NAS (PMID:15579588) UniProtKB PMID:15579588 NCBI chr15:40,594,012...40,664,342
Ensembl chr15:40,594,020...40,664,342
JBrowse link
G MFSD14A major facilitator superfamily domain containing 14A IEA Ensembl GO_REF:0000107 NCBI chr 1:100,038,078...100,083,377
Ensembl chr 1:100,038,095...100,083,377
JBrowse link
G NECTIN2 nectin cell adhesion molecule 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr19:44,846,297...44,889,223
Ensembl chr19:44,846,175...44,889,223
JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 ISS BHF-UCL GO_REF:0000024 NCBI chr17:2,593,210...2,685,617
Ensembl chr17:2,593,210...2,685,615
JBrowse link
G PLA2G3 phospholipase A2 group III IEA Ensembl GO_REF:0000107 NCBI chr22:31,134,807...31,140,508
Ensembl chr22:31,134,807...31,140,508
JBrowse link
G RFX2 regulatory factor X2 ISS UniProtKB GO_REF:0000024 NCBI chr19:5,993,164...6,110,601
Ensembl chr19:5,993,164...6,199,572
JBrowse link
G SEC23IP SEC23 interacting protein ISO (MGI:5052222|PMID:21640725) MGI PMID:21640725 MGI:5052222 NCBI chr10:119,892,696...119,944,657
Ensembl chr10:119,892,730...119,944,657
JBrowse link
G SPACA1 sperm acrosome associated 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:88,046,907...88,066,838
Ensembl chr 6:88,047,841...88,066,838
JBrowse link
G SPINK2 serine peptidase inhibitor Kazal type 2 ISS UniProt GO_REF:0000024 NCBI chr 4:56,809,860...56,822,210
Ensembl chr 4:56,809,860...56,821,742
JBrowse link
G TBC1D20 TBC1 domain family member 20 IEA Ensembl GO_REF:0000107 NCBI chr20:435,480...462,543
Ensembl chr20:435,480...462,543
JBrowse link
G TBPL1 TATA-box binding protein like 1 IEA Ensembl GO_REF:0000107 NCBI chr 6:133,952,174...133,990,432
Ensembl chr 6:133,952,170...133,990,432
JBrowse link
G TMF1 TATA element modulatory factor 1 IEA Ensembl GO_REF:0000107 NCBI chr 3:69,019,827...69,052,333
Ensembl chr 3:69,019,827...69,052,339
JBrowse link
G TXNDC8 thioredoxin domain containing 8 IEA Ensembl GO_REF:0000107 NCBI chr 9:110,300,900...110,337,887
Ensembl chr 9:110,303,476...110,337,884
Ensembl chr 9:110,303,476...110,337,884
JBrowse link
G ZPBP zona pellucida binding protein IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:49,846,355...50,093,258
Ensembl chr 7:49,850,421...50,121,329
JBrowse link
G ZPBP2 zona pellucida binding protein 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:39,868,164...39,877,896
Ensembl chr17:39,868,202...39,877,896
Ensembl chr17:39,868,202...39,877,896
JBrowse link
intramanchette transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEP131 centrosomal protein 131 ISO (MGI:5647985|PMID:24415959) MGI PMID:24415959 MGI:5647985 NCBI chr17:81,189,595...81,222,989
Ensembl chr17:81,189,593...81,222,999
JBrowse link
manchette assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEP131 centrosomal protein 131 ISO (MGI:5647985|PMID:24415959) MGI PMID:24415959 MGI:5647985 NCBI chr17:81,189,595...81,222,989
Ensembl chr17:81,189,593...81,222,999
JBrowse link
G HOOK1 hook microtubule tethering protein 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:59,814,922...59,876,370
Ensembl chr 1:59,814,786...59,876,322
Ensembl chr 1:59,814,786...59,876,322
JBrowse link
G MEIG1 meiosis/spermiogenesis associated 1 ISO (MGI:5475083|PMID:23258628) MGI PMID:23258628 MGI:5475083 NCBI chr10:14,954,228...14,988,050
Ensembl chr10:14,959,388...14,988,050
JBrowse link
G TTC26 tetratricopeptide repeat domain 26 IEA Ensembl GO_REF:0000107 NCBI chr 7:139,133,778...139,191,986
Ensembl chr 7:139,133,744...139,191,986
JBrowse link
manchette disassembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RSPH6A radial spoke head 6 homolog A ISS UniProt GO_REF:0000024 NCBI chr19:45,795,713...45,815,342
Ensembl chr19:45,795,713...45,815,308
JBrowse link
negative regulation of sperm capacitation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAEP progestagen associated endometrial protein IMP (PMID:15883155) UniProtKB PMID:15883155 NCBI chr 9:135,561,627...135,566,955
Ensembl chr 9:135,561,756...135,566,955
JBrowse link
positive regulation of flagellated sperm motility involved in capacitation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCR6 C-C motif chemokine receptor 6 IDA (PMID:23765988) UniProtKB PMID:23765988 NCBI chr 6:167,111,795...167,139,141
Ensembl chr 6:167,111,807...167,139,696
JBrowse link
G DEFB1 defensin beta 1 IMP (PMID:25122636) UniProtKB PMID:25122636 NCBI chr 8:6,870,592...6,877,936
Ensembl chr 8:6,870,592...6,877,936
JBrowse link
G IQCF1 IQ motif containing F1 ISS UniProtKB GO_REF:0000024 NCBI chr 3:51,894,876...51,903,353
Ensembl chr 3:51,894,876...51,903,353
JBrowse link
G RNASE9 ribonuclease A family member 9 (inactive) ISO (MGI:5582126|PMID:24719258) MGI PMID:24719258 MGI:5582126 NCBI chr14:20,556,093...20,560,931
Ensembl chr14:20,556,093...20,560,931
JBrowse link
proacrosomal vesicle fusion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KIAA0319L KIAA0319 like ISO (MGI:6198830|PMID:29991750) MGI PMID:29991750 MGI:6198830 NCBI chr 1:35,433,490...35,557,603
Ensembl chr 1:35,433,492...35,557,950
JBrowse link
G SOX30 SRY-box transcription factor 30 ISS UniProt GO_REF:0000024 NCBI chr 5:157,625,679...157,671,480
Ensembl chr 5:157,625,679...157,671,480
JBrowse link
regulation of sperm capacitation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TCP11 t-complex 11 ISS
IBA
(PMID:21873635) UniProtKB
GO_Central
PMID:21873635 GO_REF:0000024 NCBI chr 6:35,118,071...35,141,339
Ensembl chr 6:35,118,071...35,148,610
JBrowse link
G TCP11X1 t-complex 11 family, X-linked 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:102,215,301...102,226,795
Ensembl chr  X:102,215,301...102,229,532
JBrowse link
G TCP11X2 t-complex 11 family, X-linked 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:102,460,319...102,471,812
Ensembl chr  X:102,456,862...102,471,842
JBrowse link
sperm axoneme assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARMC2 armadillo repeat containing 2 IMP
IBA
(PMID:30686508)
(PMID:21873635)
UniProt
GO_Central
PMID:21873635, PMID:30686508 NCBI chr 6:108,848,410...108,989,090
Ensembl chr 6:108,848,416...108,974,476
JBrowse link
G BBS2 Bardet-Biedl syndrome 2 ISS BHF-UCL GO_REF:0000024 NCBI chr16:56,470,403...56,520,095
Ensembl chr16:56,466,836...56,520,087
JBrowse link
G CEP131 centrosomal protein 131 ISO (MGI:5647985|PMID:24415959) MGI PMID:24415959 MGI:5647985 NCBI chr17:81,189,595...81,222,989
Ensembl chr17:81,189,593...81,222,999
JBrowse link
G CFAP157 cilia and flagella associated protein 157 ISS
IBA
(PMID:21873635) UniProtKB
GO_Central
PMID:21873635 GO_REF:0000024 NCBI chr 9:127,706,988...127,716,002
Ensembl chr 9:127,706,988...127,716,002
JBrowse link
G CFAP206 cilia and flagella associated protein 206 ISS UniProt GO_REF:0000024 NCBI chr 6:87,407,972...87,464,465
Ensembl chr 6:87,407,972...87,464,465
JBrowse link
G CFAP43 cilia and flagella associated protein 43 IMP
IBA
ISS
(PMID:29449551)
(PMID:21873635)
UniProt
GO_Central
PMID:21873635, PMID:29449551 GO_REF:0000024 NCBI chr10:104,129,888...104,232,383
Ensembl chr10:104,129,888...104,232,364
Ensembl chr10:104,129,888...104,232,364
JBrowse link
G CFAP44 cilia and flagella associated protein 44 IMP
IBA
(PMID:29449551)
(PMID:21873635)
UniProt
GO_Central
PMID:21873635, PMID:29449551 NCBI chr 3:113,286,930...113,441,514
Ensembl chr 3:113,286,930...113,441,610
JBrowse link
G CFAP65 cilia and flagella associated protein 65 ISS UniProt GO_REF:0000024 NCBI chr 2:219,002,846...219,043,142
Ensembl chr 2:219,002,846...219,041,527
JBrowse link
G CFAP69 cilia and flagella associated protein 69 IMP (PMID:30415212) MGI PMID:30415212 NCBI chr 7:90,245,174...90,320,964
Ensembl chr 7:90,245,174...90,311,063
JBrowse link
G CFAP97D1 CFAP97 domain containing 1 ISS UniProt GO_REF:0000024 NCBI chr17:43,780,435...43,787,620
Ensembl chr17:43,780,435...43,787,620
JBrowse link
G DNAH1 dynein axonemal heavy chain 1 IMP (PMID:24360805) UniProtKB PMID:24360805 NCBI chr 3:52,313,010...52,400,497
Ensembl chr 3:52,316,319...52,400,491
JBrowse link
G FSIP2 fibrous sheath interacting protein 2 IMP (PMID:30137358), (PMID:30745215) UniProt PMID:30137358, PMID:30745215 NCBI chr 2:185,738,804...185,833,290
Ensembl chr 2:185,738,804...185,833,290
JBrowse link
G IFT88 intraflagellar transport 88 ISO (MGI:4939808|PMID:21337470) MGI PMID:21337470 MGI:4939808 NCBI chr13:20,566,446...20,691,444
Ensembl chr13:20,567,069...20,691,437
JBrowse link
G IQCG IQ motif containing G ISS
IBA
(PMID:21873635) UniProtKB
GO_Central
PMID:21873635 GO_REF:0000024 NCBI chr 3:197,889,077...197,960,111
Ensembl chr 3:197,889,077...197,960,142
JBrowse link
G MEIG1 meiosis/spermiogenesis associated 1 ISO (MGI:5475083|PMID:23258628) MGI PMID:23258628 MGI:5475083 NCBI chr10:14,954,228...14,988,050
Ensembl chr10:14,959,388...14,988,050
JBrowse link
G NEURL1 neuralized E3 ubiquitin protein ligase 1 IEA Ensembl GO_REF:0000107 NCBI chr10:103,493,705...103,592,546
Ensembl chr10:103,493,979...103,592,552
JBrowse link
G PLA2G3 phospholipase A2 group III IEA Ensembl GO_REF:0000107 NCBI chr22:31,134,807...31,140,508
Ensembl chr22:31,134,807...31,140,508
JBrowse link
G SPAG16 sperm associated antigen 16 IEA Ensembl GO_REF:0000107 NCBI chr 2:213,284,369...214,410,501
Ensembl chr 2:213,284,379...214,410,501
JBrowse link
G SPEF2 sperm flagellar 2 ISS
IBA
IMP
(PMID:21873635)
(PMID:31048344), (PMID:31151990)
UniProt
GO_Central
PMID:21873635, PMID:31048344, PMID:31151990 GO_REF:0000024 NCBI chr 5:35,617,367...35,814,611
Ensembl chr 5:35,617,844...35,814,611
JBrowse link
G TPGS1 tubulin polyglutamylase complex subunit 1 ISO (MGI:2387741|PMID:12242242) MGI PMID:12242242 MGI:2387741 NCBI chr19:507,497...519,654
Ensembl chr19:507,497...519,654
JBrowse link
G TTC12 tetratricopeptide repeat domain 12 IMP (PMID:31978331) UniProt PMID:31978331 NCBI chr11:113,314,569...113,385,952
Ensembl chr11:113,314,579...113,383,544
Ensembl chr11:113,314,579...113,383,544
JBrowse link
G TTLL1 tubulin tyrosine ligase like 1 IEA Ensembl GO_REF:0000107 NCBI chr22:43,039,516...43,089,418
Ensembl chr22:43,039,516...43,089,419
JBrowse link
G TTLL5 tubulin tyrosine ligase like 5 ISO (MGI:5498425|PMID:23558686) MGI PMID:23558686 MGI:5498425 NCBI chr14:75,661,246...75,955,079
Ensembl chr14:75,633,625...75,955,079
JBrowse link
G UBE2B ubiquitin conjugating enzyme E2 B IEA Ensembl GO_REF:0000107 NCBI chr 5:134,371,569...134,392,108
Ensembl chr 5:134,371,469...134,392,108
JBrowse link
sperm capacitation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABHD2 abhydrolase domain containing 2, acylglycerol lipase IDA
IBA
(PMID:26989199)
(PMID:21873635)
UniProtKB
GO_Central
PMID:21873635, PMID:26989199 NCBI chr15:89,088,422...89,202,355
Ensembl chr15:89,087,459...89,202,355
JBrowse link
G BSPH1 binder of sperm protein homolog 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr19:47,967,258...47,992,170
Ensembl chr19:47,968,046...47,992,170
JBrowse link
G CABYR calcium binding tyrosine phosphorylation regulated NAS
IEA
(PMID:11820818) BHF-UCL
InterPro
PMID:11820818 GO_REF:0000002 NCBI chr18:24,138,956...24,161,600
Ensembl chr18:24,138,956...24,161,603
JBrowse link
G CATSPER2 cation channel sperm associated 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:43,628,503...43,648,884
Ensembl chr15:43,628,503...43,668,118
JBrowse link
G CATSPER3 cation channel sperm associated 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:134,967,907...135,011,696
Ensembl chr 5:134,967,907...135,011,696
JBrowse link
G CATSPER4 cation channel sperm associated 4 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:26,189,962...26,202,964
Ensembl chr 1:26,190,561...26,202,968
JBrowse link
G CATSPERD cation channel sperm associated auxiliary subunit delta ISS UniProtKB GO_REF:0000024 NCBI chr19:5,720,156...5,778,734
Ensembl chr19:5,720,637...5,778,734
JBrowse link
G CATSPERZ catsper channel auxiliary subunit zeta ISS
IBA
IEA
(PMID:21873635) UniProtKB
GO_Central
InterPro
PMID:21873635 GO_REF:0000002, GO_REF:0000024 NCBI chr11:64,300,358...64,304,770
Ensembl chr11:64,300,358...64,304,770
JBrowse link
G CFTR CF transmembrane conductance regulator ISS UniProtKB GO_REF:0000024 NCBI chr 7:117,480,025...117,668,665
Ensembl chr 7:117,287,120...117,715,971
Ensembl chr 7:117,287,120...117,715,971
JBrowse link
G DLD dihydrolipoamide dehydrogenase IEA Ensembl GO_REF:0000107 NCBI chr 7:107,891,107...107,921,198
Ensembl chr 7:107,891,162...107,931,730
JBrowse link
G EFCAB9 EF-hand calcium binding domain 9 ISS
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000024 NCBI chr 5:172,194,172...172,203,454
Ensembl chr 5:172,194,172...172,203,454
JBrowse link
G ELSPBP1 epididymal sperm binding protein 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr19:47,994,632...48,025,154
Ensembl chr19:47,994,632...48,025,154
JBrowse link
G PCSK4 proprotein convertase subtilisin/kexin type 4 ISS UniProtKB GO_REF:0000024 NCBI chr19:1,481,428...1,490,874
Ensembl chr19:1,481,428...1,490,752
JBrowse link
G PEBP1 phosphatidylethanolamine binding protein 1 ISO (MGI:3603744|PMID:16183867) MGI PMID:16183867 MGI:3603744 NCBI chr12:118,136,124...118,145,584
Ensembl chr12:118,136,124...118,145,584
JBrowse link
G PRKACA protein kinase cAMP-activated catalytic subunit alpha ISS UniProtKB GO_REF:0000024 NCBI chr19:14,091,688...14,117,762
Ensembl chr19:14,091,688...14,118,084
JBrowse link
G ROPN1 rhophilin associated tail protein 1 ISS
IBA
(PMID:21873635) UniProtKB
GO_Central
PMID:21873635 GO_REF:0000024 NCBI chr 3:123,968,521...123,992,170
Ensembl chr 3:123,968,521...123,992,178
JBrowse link
G ROPN1B rhophilin associated tail protein 1B ISS
IBA
(PMID:21873635) UniProtKB
GO_Central
PMID:21873635 GO_REF:0000024 NCBI chr 3:125,969,161...125,983,454
Ensembl chr 3:125,969,160...125,983,454
JBrowse link
G ROPN1L rhophilin associated tail protein 1 like ISS
IBA
(PMID:21873635) UniProtKB
GO_Central
PMID:21873635 GO_REF:0000024 NCBI chr 5:10,441,879...10,482,807
Ensembl chr 5:10,441,524...10,472,029
JBrowse link
G SEMG1 semenogelin 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:45,207,033...45,209,768
Ensembl chr20:45,207,033...45,209,768
JBrowse link
G SEMG2 semenogelin 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:45,221,373...45,224,458
Ensembl chr20:45,221,373...45,224,458
JBrowse link
G SEPTIN4 septin 4 ISO (MGI:3531234|PMID:15737931) MGI PMID:15737931 MGI:3531234 NCBI chr17:58,520,255...58,544,372
Ensembl chr17:58,520,250...58,544,368
JBrowse link
G SLC26A3 solute carrier family 26 member 3 ISS UniProtKB GO_REF:0000024 NCBI chr 7:107,765,469...107,803,223
Ensembl chr 7:107,765,467...107,803,225
JBrowse link
G SLC26A6 solute carrier family 26 member 6 ISS UniProtKB GO_REF:0000024 NCBI chr 3:48,625,723...48,635,461
Ensembl chr 3:48,625,723...48,635,493
JBrowse link
G SLC26A8 solute carrier family 26 member 8 IEA InterPro GO_REF:0000002 NCBI chr 6:35,943,516...36,024,641
Ensembl chr 6:35,943,516...36,024,868
JBrowse link
G SPINK1 serine peptidase inhibitor Kazal type 1 IEA Ensembl GO_REF:0000107 NCBI chr 5:147,824,582...147,839,196
Ensembl chr 5:147,824,568...147,831,786
JBrowse link
sperm chromatin condensation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FSHR follicle stimulating hormone receptor ISO (MGI:1855818|PMID:10775161) MGI PMID:10775161 MGI:1855818 NCBI chr 2:48,953,161...49,154,527
Ensembl chr 2:48,962,157...49,154,527
Ensembl chr 2:48,962,157...49,154,527
JBrowse link
G H1-7 H1.7 linker histone ISS (PMID:15710904) UniProtKB PMID:15710904 NCBI chr12:48,328,980...48,330,279
Ensembl chr12:48,328,980...48,330,279
JBrowse link
G SELENOF selenoprotein F ISO RGD PMID:11344099 RGD:728803 NCBI chr 1:86,862,445...86,914,577
Ensembl chr 1:86,862,445...86,914,424
JBrowse link
G SRPK1 SRSF protein kinase 1 TAS (PMID:21205200) UniProtKB PMID:21205200 NCBI chr 6:35,832,966...35,921,098
Ensembl chr 6:35,832,966...35,921,342
JBrowse link
G SYCP1 synaptonemal complex protein 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:114,854,268...114,995,370
Ensembl chr 1:114,854,863...114,995,370
JBrowse link
G SYCP3 synaptonemal complex protein 3 ISO (MGI:5315075|PMID:22164254) MGI PMID:22164254 MGI:5315075 NCBI chr12:101,728,648...101,739,721
Ensembl chr12:101,728,648...101,739,472
JBrowse link
G TSSK6 testis specific serine kinase 6 ISS UniProtKB GO_REF:0000024 NCBI chr19:19,514,219...19,515,548
Ensembl chr19:19,512,418...19,515,548
JBrowse link
sperm individualization term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SPEM1 spermatid maturation 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:7,420,324...7,421,632
Ensembl chr17:7,420,324...7,421,632
JBrowse link
spermatid nucleus differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGFG1 ArfGAP with FG repeats 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:227,472,156...227,561,217
Ensembl chr 2:227,472,152...227,561,214
JBrowse link
G GOPC golgi associated PDZ and coiled-coil motif containing ISO (MGI:3701727|PMID:16765935) MGI PMID:16765935 MGI:3701727 NCBI chr 6:117,560,269...117,602,520
Ensembl chr 6:117,560,269...117,602,542
JBrowse link
G HMGB2 high mobility group box 2 IEA Ensembl GO_REF:0000107 NCBI chr 4:173,331,376...173,334,358
Ensembl chr 4:173,331,376...173,334,432
JBrowse link
G MFSD14A major facilitator superfamily domain containing 14A IEA Ensembl GO_REF:0000107 NCBI chr 1:100,038,078...100,083,377
Ensembl chr 1:100,038,095...100,083,377
JBrowse link
G NECTIN2 nectin cell adhesion molecule 2 IEA Ensembl GO_REF:0000107 NCBI chr19:44,846,297...44,889,223
Ensembl chr19:44,846,175...44,889,223
JBrowse link
G PYGO1 pygopus family PHD finger 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:55,538,884...55,588,971
Ensembl chr15:55,538,890...55,588,947
JBrowse link
G PYGO2 pygopus family PHD finger 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:154,957,026...154,961,782
Ensembl chr 1:154,957,026...154,963,853
JBrowse link
G TBPL1 TATA-box binding protein like 1 IEA Ensembl GO_REF:0000107 NCBI chr 6:133,952,174...133,990,432
Ensembl chr 6:133,952,170...133,990,432
JBrowse link
G TMF1 TATA element modulatory factor 1 IEA Ensembl GO_REF:0000107 NCBI chr 3:69,019,827...69,052,333
Ensembl chr 3:69,019,827...69,052,339
JBrowse link
G TNP1 transition protein 1 TAS (PMID:12743712) UniProtKB PMID:12743712 NCBI chr 2:216,859,458...216,860,064
Ensembl chr 2:216,859,458...216,860,064
JBrowse link
spermatid nucleus elongation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DMRTC2 DMRT like family C2 IEA Ensembl GO_REF:0000107 NCBI chr19:41,844,743...41,852,333
Ensembl chr19:41,844,743...41,852,333
JBrowse link
G H1-7 H1.7 linker histone ISS (PMID:15710904) UniProtKB PMID:15710904 NCBI chr12:48,328,980...48,330,279
Ensembl chr12:48,328,980...48,330,279
JBrowse link
G IFT88 intraflagellar transport 88 ISO (MGI:4939808|PMID:21337470) MGI PMID:21337470 MGI:4939808 NCBI chr13:20,566,446...20,691,444
Ensembl chr13:20,567,069...20,691,437
JBrowse link
G KDM3A lysine demethylase 3A IEA Ensembl GO_REF:0000107 NCBI chr 2:86,440,647...86,492,716
Ensembl chr 2:86,440,647...86,492,716
JBrowse link
G TNP1 transition protein 1 IMP
IBA
(PMID:10781074)
(PMID:21873635)
UniProtKB
GO_Central
PMID:10781074, PMID:21873635 NCBI chr 2:216,859,458...216,860,064
Ensembl chr 2:216,859,458...216,860,064
JBrowse link
spermatogenesis, exchange of chromosomal proteins term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHD5 chromodomain helicase DNA binding protein 5 ISS UniProtKB GO_REF:0000024 NCBI chr 1:6,101,787...6,180,321
Ensembl chr 1:6,101,787...6,180,321
JBrowse link
G FSHR follicle stimulating hormone receptor IEA Ensembl GO_REF:0000107 NCBI chr 2:48,953,161...49,154,527
Ensembl chr 2:48,962,157...49,154,527
Ensembl chr 2:48,962,157...49,154,527
JBrowse link
G H2BC1 H2B clustered histone 1 ISS UniProtKB GO_REF:0000024 NCBI chr 6:25,726,777...25,727,345
Ensembl chr 6:25,726,777...25,727,292
Ensembl chr 6:25,726,777...25,727,292
JBrowse link
G PIWIL1 piwi like RNA-mediated gene silencing 1 ISS UniProtKB GO_REF:0000024 NCBI chr12:130,337,887...130,412,708
Ensembl chr12:130,337,887...130,372,637
JBrowse link
G PSME4 proteasome activator subunit 4 ISS
IBA
(PMID:21873635) UniProtKB
GO_Central
PMID:21873635 GO_REF:0000024 NCBI chr 2:53,864,069...53,970,993
Ensembl chr 2:53,864,069...53,970,993
JBrowse link
G RNF8 ring finger protein 8 ISS UniProtKB GO_REF:0000024 NCBI chr 6:37,353,983...37,394,734
Ensembl chr 6:37,353,979...37,394,734
JBrowse link
G SYCP3 synaptonemal complex protein 3 IMP (PMID:14643120) UniProtKB PMID:14643120 NCBI chr12:101,728,648...101,739,721
Ensembl chr12:101,728,648...101,739,472
JBrowse link
G TNP1 transition protein 1 ISS UniProtKB GO_REF:0000024 NCBI chr 2:216,859,458...216,860,064
Ensembl chr 2:216,859,458...216,860,064
JBrowse link
G TNP2 transition protein 2 ISS UniProtKB GO_REF:0000024 NCBI chr16:11,267,857...11,269,325
Ensembl chr16:11,267,748...11,269,533
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18673
    cellular process 17693
      cellular process involved in reproduction in multicellular organism 473
        germ cell development 348
          spermatid development 198
            Nebenkern assembly 0
            acrosome assembly + 22
            intramanchette transport 1
            manchette assembly 4
            manchette disassembly 1
            sperm axoneme assembly 24
            sperm capacitation + 33
            sperm individualization 1
            spermatid nucleus differentiation + 26
Path 2
Term Annotations click to browse term
  biological_process 18673
    reproduction 1902
      reproductive process 1899
        multi-organism reproductive process 1329
          sexual reproduction 1078
            gamete generation 887
              male gamete generation 702
                spermatogenesis 680
                  spermatid differentiation 206
                    spermatid development 198
                      Nebenkern assembly 0
                      acrosome assembly + 22
                      intramanchette transport 1
                      manchette assembly 4
                      manchette disassembly 1
                      sperm axoneme assembly 24
                      sperm capacitation + 33
                      sperm individualization 1
                      spermatid nucleus differentiation + 26
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.