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ONTOLOGY REPORT - ANNOTATIONS


Term:spermatid development
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Accession:GO:0007286 term browser browse the term
Definition:The process whose specific outcome is the progression of a spermatid over time, from its formation to the mature structure.
Synonyms:exact_synonym: spermatid cell development;   spermiogenesis
 xref: Wikipedia:Spermiogenesis


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spermatid development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACRBP acrosin binding protein ISO (MGI:5789676|PMID:27303034) UniProt PMID:27303034 MGI:5789676 NCBI chr 5:64,036,810...64,047,846
Ensembl chr 5:64,027,876...64,047,847
JBrowse link
G ADAD1 adenosine deaminase domain containing 1 IEA Ensembl GO_REF:0000107 NCBI chr 8:101,644,084...101,715,418
Ensembl chr 8:101,540,401...101,715,436
JBrowse link
G ADRM1 adhesion regulating molecule 1 ISO (MGI:4849324|PMID:21048919) BHF-UCL PMID:21048919 MGI:4849324 NCBI chr17:61,692,923...61,698,138
Ensembl chr17:61,692,945...61,698,146
JBrowse link
G AFF4 AF4/FMR2 family member 4 IEA Ensembl GO_REF:0000107 NCBI chr 2:135,196,067...135,283,931
Ensembl chr 2:135,200,076...135,283,916
JBrowse link
G ALMS1 ALMS1 centrosome and basal body associated protein ISO (MGI:3698928|PMID:17206865)
(MGI:3639060|PMID:16513793)
MGI PMID:16513793, PMID:17206865 MGI:3639060, MGI:3698928 NCBI chr 3:69,253,742...69,417,043
Ensembl chr 3:69,253,748...69,417,397
JBrowse link
G BBS4 Bardet-Biedl syndrome 4 ISO (MGI:3044824|PMID:15173597) MGI PMID:15173597 MGI:3044824 NCBI chr 7:60,631,913...60,693,359 JBrowse link
G BRIP1 BRCA1 interacting protein C-terminal helicase 1 IEA Ensembl GO_REF:0000107 NCBI chr12:36,498,138...36,639,847
Ensembl chr12:36,443,697...36,634,088
JBrowse link
G CAPZA3 capping actin protein of muscle Z-line subunit alpha 3 ISO (MGI:3848085|PMID:19341723) RGD
MGI
PMID:9406198, PMID:19341723 MGI:3848085, RGD:69796 NCBI chr 5:54,406,245...54,408,330 JBrowse link
G CCDC42 coiled-coil domain containing 42 IEA Ensembl GO_REF:0000107 NCBI chr12:53,869,559...53,883,929
Ensembl chr12:53,869,563...53,964,485
JBrowse link
G CCDC63 coiled-coil domain containing 63 ISO (MGI:5770027|PMID:26501274) UniProt PMID:26501274 MGI:5770027 NCBI chr14:32,140,323...32,300,930 JBrowse link
G CCNB1IP1 cyclin B1 interacting protein 1 IEA Ensembl GO_REF:0000107 NCBI chr 7:78,553,680...78,576,057
Ensembl chr 7:78,553,764...78,575,516
JBrowse link
G CDYL chromodomain Y like IEA Ensembl GO_REF:0000107 NCBI chr 7:2,845,903...2,967,537
Ensembl chr 7:2,785,405...2,966,241
JBrowse link
G CELF1 CUGBP Elav-like family member 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:15,066,518...15,161,478
Ensembl chr 2:15,066,537...15,187,797
JBrowse link
G CEP131 centrosomal protein 131 ISO (MGI:5647985|PMID:24415959)
(MGI:77572|PMID:8529672)
MGI PMID:8529672, PMID:24415959 MGI:5647985, MGI:77572 NCBI chr12:1,537,900...1,556,931
Ensembl chr12:1,538,326...1,556,930
JBrowse link
G CEP57 centrosomal protein 57 ISO (PMID:12954732) HGNC PMID:12954732 NCBI chr 9:27,812,944...27,858,293 JBrowse link
G CIB1 calcium and integrin binding 1 IEA Ensembl GO_REF:0000107 NCBI chr 7:55,794,834...55,798,666
Ensembl chr 7:55,794,834...55,798,590
JBrowse link
G DDIAS DNA damage induced apoptosis suppressor ISO (MGI:3718924|PMID:17515607) MGI PMID:17515607 MGI:3718924 NCBI chr 9:17,077,884...17,097,597
Ensembl chr 9:17,077,884...17,097,597
JBrowse link
G DDX25 DEAD-box helicase 25 IEA Ensembl GO_REF:0000107 NCBI chr 9:53,029,450...53,044,088
Ensembl chr 9:53,029,790...53,044,387
JBrowse link
G DHH desert hedgehog signaling molecule IEA Ensembl GO_REF:0000107 NCBI chr 5:15,114,524...15,119,610
Ensembl chr 5:15,114,524...15,119,577
JBrowse link
G DMC1 DNA meiotic recombinase 1 IEA Ensembl GO_REF:0000107 NCBI chr 5:9,431,236...9,470,333
Ensembl chr 5:9,431,307...9,470,549
JBrowse link
G DPY19L2 dpy-19 like 2 IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr18:38,693,951...38,765,943
Ensembl chr18:38,693,003...38,765,941
JBrowse link
G DYNC1H1 dynein cytoplasmic 1 heavy chain 1 ISO RGD PMID:8006076 RGD:13207350
G DYNLL1 dynein light chain LC8-type 1 ISO RGD PMID:15983119 RGD:13208521 NCBI chr14:40,455,954...40,458,352
Ensembl chr14:40,455,985...40,459,105
JBrowse link
G EHMT2 euchromatic histone lysine methyltransferase 2 ISO (MGI:3717933|PMID:17599069) MGI PMID:17599069 MGI:3717933 NCBI chr 7:23,977,683...23,992,673
Ensembl chr 7:23,977,683...23,993,478
JBrowse link
G FANCG FA complementation group G IEA Ensembl GO_REF:0000107 NCBI chr 1:235,871,073...235,879,604
Ensembl chr 1:235,871,349...235,887,992
JBrowse link
G FNDC3A fibronectin type III domain containing 3A IEA Ensembl GO_REF:0000107 NCBI chr11:18,564,280...18,757,742
Ensembl chr11:18,564,280...18,757,869
JBrowse link
G FSCN3 fascin actin-bundling protein 3 IEA InterPro GO_REF:0000002 NCBI chr18:20,684,621...20,693,552
Ensembl chr18:20,686,746...20,693,552
JBrowse link
G FSHR follicle stimulating hormone receptor ISO (MGI:2137997|PMID:11466221), (MGI:3797480|PMID:15973687) MGI PMID:11466221, PMID:15973687 MGI:2137997, MGI:3797480 NCBI chr 3:91,607,236...91,775,255
Ensembl chr 3:91,607,305...91,774,683
JBrowse link
G GALNTL5 polypeptide N-acetylgalactosaminyltransferase like 5 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:5,353,774...5,474,964
Ensembl chr18:5,353,769...5,433,814
JBrowse link
G GAPDHS glyceraldehyde-3-phosphate dehydrogenase, spermatogenic ISO RGD PMID:17375205 RGD:2301985 NCBI chr 6:44,968,965...44,978,992
Ensembl chr 6:44,969,288...44,978,884
JBrowse link
G H3-3A H3 histone, family 3A IEA Ensembl GO_REF:0000107 NCBI chr10:13,939,938...13,947,976
Ensembl chr10:13,939,594...13,948,000
JBrowse link
G HOOK1 hook microtubule tethering protein 1 ISO (MGI:2180892|PMID:12075009) MGI PMID:12075009 MGI:2180892 NCBI chr 6:152,636,118...152,709,422 JBrowse link
G HSPA2 heat shock protein family A (Hsp70) member 2 ISO (MGI:82564|PMID:8622925) MGI PMID:8622925 MGI:82564 NCBI chr 7:88,607,140...88,609,947 JBrowse link
G ICA1L islet cell autoantigen 1 like IEA Ensembl GO_REF:0000107 NCBI chr15:106,293,936...106,377,573
Ensembl chr15:106,295,902...106,377,555
JBrowse link
G ING2 inhibitor of growth family member 2 IEA Ensembl GO_REF:0000107 NCBI chr15:44,917,595...44,925,900
Ensembl chr15:44,918,066...44,925,867
JBrowse link
G INSL6 insulin like 6 ISO (MGI:4430687|PMID:19520787) MGI PMID:19520787 MGI:4430687 NCBI chr 1:216,792,785...216,820,197
Ensembl chr 1:216,792,787...216,823,479
JBrowse link
G IQCG IQ motif containing G ISO (MGI:5617699|PMID:24362311)
(MGI:5608638|PMID:24849454)
MGI
UniProt
PMID:24362311, PMID:24849454 MGI:5608638, MGI:5617699 NCBI chr13:134,540,048...134,588,122
Ensembl chr13:134,536,091...134,588,049
JBrowse link
G JAM2 junctional adhesion molecule 2 IEA Ensembl GO_REF:0000107 NCBI chr13:189,199,789...189,275,843
Ensembl chr13:189,165,968...189,275,839
JBrowse link
G JAM3 junctional adhesion molecule 3 IEA Ensembl GO_REF:0000107 NCBI chr 9:60,629,245...60,738,979
Ensembl chr 9:60,613,400...60,738,924
JBrowse link
G KIT KIT proto-oncogene, receptor tyrosine kinase IEA Ensembl GO_REF:0000107 NCBI chr 8:41,402,334...41,492,306
Ensembl chr 8:41,402,043...41,493,735
JBrowse link
G KLHL10 kelch like family member 10 IEA Ensembl GO_REF:0000107 NCBI chr12:20,851,168...20,862,183
Ensembl chr12:20,854,160...20,861,594
JBrowse link
G LOC100153093 RIMS-binding protein 3A IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:50,323,037...50,331,111 JBrowse link
G LOC100521680 histone H3.3 IEA Ensembl GO_REF:0000107 NCBI chr12:5,632,326...5,634,977
Ensembl chr12:5,632,365...5,634,726
JBrowse link
G MEI1 meiotic double-stranded break formation protein 1 IEA Ensembl GO_REF:0000107 NCBI chr 5:6,785,957...6,870,599
Ensembl chr 5:6,800,959...6,870,837
JBrowse link
G MEIOC meiosis specific with coiled-coil domain IEA Ensembl GO_REF:0000107 NCBI chr12:18,652,582...18,663,227
Ensembl chr12:18,652,493...18,671,909
JBrowse link
G MFSD14A major facilitator superfamily domain containing 14A ISO (MGI:5763056|PMID:27107036) MGI PMID:27107036 MGI:5763056 NCBI chr 4:118,049,094...118,090,374
Ensembl chr 4:118,049,098...118,090,350
JBrowse link
G MKKS McKusick-Kaufman syndrome IEA Ensembl GO_REF:0000107 NCBI chr17:19,341,024...19,363,007
Ensembl chr17:19,340,977...19,362,871
JBrowse link
G NECTIN2 nectin cell adhesion molecule 2 IEA InterPro GO_REF:0000002 NCBI chr 6:51,317,386...51,358,665 JBrowse link
G NECTIN3 nectin cell adhesion molecule 3 IEA InterPro GO_REF:0000002 NCBI chr13:148,448,581...148,578,920
Ensembl chr13:148,452,278...148,579,160
JBrowse link
G NME5 NME/NM23 family member 5 IEA Ensembl GO_REF:0000107 NCBI chr 2:140,132,871...140,168,655
Ensembl chr 2:140,128,514...140,167,893
JBrowse link
G NSUN2 NOP2/Sun RNA methyltransferase 2 IEA Ensembl GO_REF:0000107 NCBI chr16:75,335,565...75,414,659
Ensembl chr16:75,335,246...75,367,184
JBrowse link
G NUP210L nucleoporin 210 like IEA Ensembl GO_REF:0000107 NCBI chr 4:95,573,974...95,697,196
Ensembl chr 4:95,573,722...95,697,196
JBrowse link
G OCA2 OCA2 melanosomal transmembrane protein ISO (MGI:3040715|PMID:7317942) MGI PMID:7317942 MGI:3040715 NCBI chr15:56,657,648...56,869,920 JBrowse link
G ODF2 outer dense fiber of sperm tails 2 ISO RGD PMID:9698445 RGD:69913 NCBI chr 1:268,856,755...268,893,390
Ensembl chr 1:268,856,768...268,893,387
JBrowse link
G OSBP2 oxysterol binding protein 2 IEA Ensembl GO_REF:0000107 NCBI chr14:47,558,088...47,737,994
Ensembl chr14:47,544,413...47,737,998
JBrowse link
G PACRG parkin coregulated IEA Ensembl GO_REF:0000107 NCBI chr 1:4,964,686...5,465,258
Ensembl chr 1:4,968,225...5,465,066
JBrowse link
G PANK2 pantothenate kinase 2 IEA Ensembl GO_REF:0000107 NCBI chr17:31,797,604...31,844,301
Ensembl chr17:31,798,776...31,828,627
JBrowse link
G PDILT protein disulfide isomerase like, testis expressed IEA Ensembl GO_REF:0000107 NCBI chr 3:25,429,591...25,466,922
Ensembl chr 3:25,425,687...25,466,912
JBrowse link
G PEBP1 phosphatidylethanolamine binding protein 1 ISO RGD PMID:9508097 RGD:1357207 NCBI chr14:34,523,901...34,530,238 JBrowse link
G PITHD1 PITH domain containing 1 IEA Ensembl GO_REF:0000107 NCBI chr 6:81,590,868...81,598,874
Ensembl chr 6:81,590,962...81,598,872
JBrowse link
G PIWIL1 piwi like RNA-mediated gene silencing 1 IEA InterPro GO_REF:0000002 NCBI chr14:24,729,346...24,760,056
Ensembl chr14:24,730,053...24,760,013
JBrowse link
G PLD6 phospholipase D family member 6 IEA Ensembl GO_REF:0000107 NCBI chr12:61,057,896...61,060,681
Ensembl chr12:61,057,944...61,060,679
JBrowse link
G PPP2R2B protein phosphatase 2 regulatory subunit Bbeta ISO RGD PMID:8389301 RGD:633587 NCBI chr 2:147,938,074...148,422,825
Ensembl chr 2:147,937,439...148,411,731
JBrowse link
G PRKG1 protein kinase cGMP-dependent 1 ISO RGD PMID:15713832 RGD:1599621 NCBI chr14:97,558,531...98,793,080
Ensembl chr14:97,560,785...98,793,318
JBrowse link
G PRM1 protamine 1 ISO (MGI:1934083|PMID:11326282) MGI PMID:11326282 MGI:1934083 NCBI chr 3:31,861,087...31,861,529
Ensembl chr 3:31,861,128...31,861,385
JBrowse link
G PRM2 protamine 2 IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 3:31,864,350...31,864,959
Ensembl chr 3:31,864,323...31,865,023
JBrowse link
G PYGO1 pygopus family PHD finger 1 ISO (MGI:5498404|PMID:23637336) MGI PMID:23637336 MGI:5498404 NCBI chr 1:116,293,361...116,326,753
Ensembl chr 1:116,292,642...116,322,415
JBrowse link
G QKI QKI, KH domain containing RNA binding IEA Ensembl GO_REF:0000107 NCBI chr 1:4,732,575...4,883,386
Ensembl chr 1:4,735,513...4,883,768
JBrowse link
G RAN RAN, member RAS oncogene family ISO RGD PMID:12211070 RGD:727421 NCBI chr14:24,312,810...24,318,024
Ensembl chr14:24,311,577...24,317,789
JBrowse link
G REC8 REC8 meiotic recombination protein IEA Ensembl GO_REF:0000107 NCBI chr 7:75,118,743...75,127,759
Ensembl chr 7:75,118,744...75,139,630
JBrowse link
G RFX2 regulatory factor X2 ISO (MGI:5699785|PMID:26248850), (MGI:5708804|PMID:26162102), (MGI:5763317|PMID:26853561) UniProt PMID:26162102, PMID:26248850, PMID:26853561 MGI:5699785, MGI:5708804, MGI:5763317 NCBI chr 2:72,949,859...73,051,184
Ensembl chr 2:72,950,056...73,051,181
JBrowse link
G RNF17 ring finger protein 17 IEA Ensembl GO_REF:0000107 NCBI chr11:154,457...281,039
Ensembl chr11:154,458...280,981
JBrowse link
G RNF8 ring finger protein 8 ISO (MGI:4441228|PMID:20153262) UniProt PMID:20153262 MGI:4441228 NCBI chr 7:32,931,786...32,969,536
Ensembl chr 7:32,931,786...33,063,739
JBrowse link
G RSPH1 radial spoke head component 1 IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr13:205,808,923...205,827,098
Ensembl chr13:205,806,686...205,827,204
JBrowse link
G SBF1 SET binding factor 1 ISO RGD PMID:27335132 RGD:38549340 NCBI chr 5:260,779...284,512
Ensembl chr 5:260,786...287,455
JBrowse link
G SEC23IP SEC23 interacting protein ISO (MGI:5052222|PMID:21640725) MGI PMID:21640725 MGI:5052222 NCBI chr14:129,758,279...129,810,642
Ensembl chr14:129,758,278...129,810,642
JBrowse link
G SEPTIN4 septin 4 ISO (MGI:3531234|PMID:15737931) MGI PMID:15737931 MGI:3531234 NCBI chr12:34,772,776...34,785,176 JBrowse link
G SIX5 SIX homeobox 5 IEA Ensembl GO_REF:0000107 NCBI chr 6:52,095,332...52,099,458
Ensembl chr 6:52,095,334...52,099,372
JBrowse link
G SLIRP SRA stem-loop interacting RNA binding protein IEA Ensembl GO_REF:0000107 NCBI chr 7:100,710,472...100,718,290
Ensembl chr 7:100,710,381...100,720,374
JBrowse link
G SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 ISO RGD PMID:22215678 RGD:9586361 NCBI chr 1:219,624,773...219,815,438
Ensembl chr 1:219,573,535...219,815,421
JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 ISO RGD PMID:22215678 RGD:9586361 NCBI chr 2:69,717,175...69,810,301
Ensembl chr 2:69,662,238...69,810,298
JBrowse link
G SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 ISO RGD PMID:22215678 RGD:9586361 NCBI chr12:21,784,410...21,807,170
Ensembl chr12:21,784,426...21,807,170
JBrowse link
G SOX30 SRY-box transcription factor 30 ISO (MGI:6191808|PMID:29848638) UniProt PMID:29848638 MGI:6191808 NCBI chr16:65,642,107...65,677,693
Ensembl chr16:65,642,422...65,677,088
JBrowse link
G SPINK2 serine peptidase inhibitor Kazal type 2 ISO (PMID:28554943)
(MGI:6114299|PMID:28554943)
(MGI:5287926|PMID:21705336)
UniProt
MGI
PMID:21705336, PMID:28554943 MGI:5287926, MGI:6114299 NCBI chr 8:55,982,377...55,989,592 JBrowse link
G SPO11 SPO11 initiator of meiotic double stranded breaks IEA Ensembl GO_REF:0000107 NCBI chr17:57,730,676...57,745,875
Ensembl chr17:57,730,749...57,745,875
JBrowse link
G STK11 serine/threonine kinase 11 ISO (MGI:3829517|PMID:18774945) UniProt PMID:18774945 MGI:3829517 NCBI chr 2:77,229,888...77,249,322
Ensembl chr 2:77,230,372...77,249,327
JBrowse link
G STRBP spermatid perinuclear RNA binding protein IEA Ensembl GO_REF:0000107 NCBI chr 1:264,030,135...264,195,908
Ensembl chr 1:264,045,657...264,195,884
JBrowse link
G SUN5 Sad1 and UNC84 domain containing 5 ISO (MGI:5916674|PMID:28945193) UniProt PMID:28945193 MGI:5916674 NCBI chr17:36,508,569...36,528,052
Ensembl chr17:36,508,549...36,528,140
JBrowse link
G TAF7L TATA-box binding protein associated factor 7 like ISO (MGI:3709925|PMID:17242199) MGI PMID:17242199 MGI:3709925 NCBI chr  X:82,930,258...82,951,065
Ensembl chr  X:82,930,264...82,951,042
JBrowse link
G TARBP2 TARBP2 subunit of RISC loading complex IEA Ensembl GO_REF:0000107 NCBI chr 5:18,718,588...18,723,843
Ensembl chr 5:18,718,158...18,723,843
JBrowse link
G TDRD5 tudor domain containing 5 IEA Ensembl GO_REF:0000107 NCBI chr 9:121,245,080...121,337,339
Ensembl chr 9:121,211,324...121,332,219
JBrowse link
G TMF1 TATA element modulatory factor 1 ISO (MGI:5469555|PMID:23000399)
(MGI:4849617|PMID:20691678)
MGI PMID:20691678, PMID:23000399 MGI:4849617, MGI:5469555 NCBI chr13:50,442,017...50,477,363
Ensembl chr13:50,444,256...50,477,291
JBrowse link
G TNK2 tyrosine kinase non receptor 2 ISO (MGI:6246359|PMID:23562806) UniProt PMID:23562806 MGI:6246359 NCBI chr13:134,082,266...134,124,826
Ensembl chr13:134,081,697...134,124,826
JBrowse link
G TNP1 transition protein 1 ISS UniProt GO_REF:0000024 NCBI chr15:119,037,492...119,038,099
Ensembl chr15:119,037,496...119,038,105
JBrowse link
G TOPAZ1 testis and ovary specific PAZ domain containing 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:27,574,718...27,644,009
Ensembl chr13:27,574,767...27,643,980
JBrowse link
G TRIP13 thyroid hormone receptor interactor 13 IEA Ensembl GO_REF:0000107 NCBI chr16:79,458,843...79,473,705
Ensembl chr16:79,458,847...79,473,712
JBrowse link
G TSSK1B testis specific serine kinase 1B IEA Ensembl GO_REF:0000107 NCBI chr14:50,937,885...50,938,979
Ensembl chr14:50,934,604...50,940,383
JBrowse link
G TSSK2 testis specific serine kinase 2 IEA Ensembl GO_REF:0000107 NCBI chr14:50,943,017...50,944,093
Ensembl chr14:50,943,017...50,944,093
JBrowse link
G TSSK4 testis specific serine kinase 4 IEA Ensembl GO_REF:0000107 NCBI chr 7:75,094,921...75,104,189
Ensembl chr 7:75,094,926...75,106,331
JBrowse link
G TTC21A tetratricopeptide repeat domain 21A IEA Ensembl GO_REF:0000107 NCBI chr13:23,797,518...23,830,334
Ensembl chr13:23,797,100...23,830,332
JBrowse link
G TTC26 tetratricopeptide repeat domain 26 ISO (MGI:3040715|PMID:7317942) MGI PMID:7317942 MGI:3040715 NCBI chr18:10,462,670...10,509,595
Ensembl chr18:10,462,670...10,509,567
JBrowse link
G UBE2J1 ubiquitin conjugating enzyme E2 J1 IEA Ensembl GO_REF:0000107 NCBI chr 1:57,340,622...57,364,263
Ensembl chr 1:57,337,079...57,364,390
JBrowse link
G YBX2 Y-box binding protein 2 ISO (MGI:3576442|PMID:15824319), (MGI:3696301|PMID:17035640) MGI PMID:15824319, PMID:17035640 MGI:3576442, MGI:3696301 NCBI chr12:52,635,383...52,642,443
Ensembl chr12:52,635,383...52,641,651
JBrowse link
G YTHDC2 YTH domain containing 2 IEA Ensembl GO_REF:0000107 NCBI chr 2:118,003,402...118,092,176
Ensembl chr 2:117,871,336...118,104,508
JBrowse link
G ZFP42 ZFP42 zinc finger protein ISO (MGI:5285464|PMID:21641340) MGI PMID:21641340 MGI:5285464 NCBI chr17:7,401,729...7,409,027
Ensembl chr17:7,402,071...7,403,247
JBrowse link
G ZMYND15 zinc finger MYND-type containing 15 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:52,139,412...52,145,013
Ensembl chr12:52,139,450...52,144,981
JBrowse link
acrosome assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACRBP acrosin binding protein ISS
IEA
UniProt
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr 5:64,036,810...64,047,846
Ensembl chr 5:64,027,876...64,047,847
JBrowse link
G AGFG1 ArfGAP with FG repeats 1 IEA Ensembl GO_REF:0000107 NCBI chr15:128,898,806...128,980,782
Ensembl chr15:128,898,621...128,975,520
JBrowse link
G CCDC136 coiled-coil domain containing 136 ISO (MGI:5816406|PMID:27076447) UniProt PMID:27076447 MGI:5816406 NCBI chr18:19,793,764...19,824,855
Ensembl chr18:19,793,780...19,824,458
JBrowse link
G CHN2 chimerin 2 ISO RGD PMID:8440677 RGD:724725 NCBI chr18:43,209,186...43,509,592 JBrowse link
G KIAA0319L KIAA0319 like ISO (MGI:6198830|PMID:29991750) MGI PMID:29991750 MGI:6198830 NCBI chr 6:91,630,664...91,747,790
Ensembl chr 6:91,605,502...91,747,773
JBrowse link
G MFSD14A major facilitator superfamily domain containing 14A IEA Ensembl GO_REF:0000107 NCBI chr 4:118,049,094...118,090,374
Ensembl chr 4:118,049,098...118,090,350
JBrowse link
G NECTIN2 nectin cell adhesion molecule 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:51,317,386...51,358,665 JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 IEA Ensembl GO_REF:0000107 NCBI chr12:48,567,329...48,735,836
Ensembl chr12:48,567,337...48,735,838
JBrowse link
G PLA2G3 phospholipase A2 group III IEA Ensembl GO_REF:0000107 NCBI chr14:47,923,005...47,928,762
Ensembl chr14:47,923,787...47,928,810
JBrowse link
G RFX2 regulatory factor X2 IEA Ensembl GO_REF:0000107 NCBI chr 2:72,949,859...73,051,184
Ensembl chr 2:72,950,056...73,051,181
JBrowse link
G SEC23IP SEC23 interacting protein ISO (MGI:5052222|PMID:21640725) MGI PMID:21640725 MGI:5052222 NCBI chr14:129,758,279...129,810,642
Ensembl chr14:129,758,278...129,810,642
JBrowse link
G SPACA1 sperm acrosome associated 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:56,378,300...56,395,497
Ensembl chr 1:56,378,291...56,395,493
JBrowse link
G SPINK2 serine peptidase inhibitor Kazal type 2 IEA Ensembl GO_REF:0000107 NCBI chr 8:55,982,377...55,989,592 JBrowse link
G TBC1D20 TBC1 domain family member 20 IEA Ensembl GO_REF:0000107 NCBI chr17:34,760,379...34,778,301
Ensembl chr17:34,760,379...34,779,251
JBrowse link
G TBPL1 TATA-box binding protein like 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:29,899,956...29,936,773
Ensembl chr 1:29,899,957...29,936,718
JBrowse link
G TMF1 TATA element modulatory factor 1 IEA Ensembl GO_REF:0000107 NCBI chr13:50,442,017...50,477,363
Ensembl chr13:50,444,256...50,477,291
JBrowse link
G TXNDC8 thioredoxin domain containing 8 (spermatozoa) ISO RGD PMID:15181017 RGD:1303999 NCBI chr 1:251,312,120...251,340,761
Ensembl chr 1:251,307,083...251,340,851
JBrowse link
G ZPBP zona pellucida binding protein IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:136,105,129...136,186,744
Ensembl chr 9:136,105,129...136,186,744
JBrowse link
G ZPBP2 zona pellucida binding protein 2 IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr12:22,454,974...22,462,918
Ensembl chr12:22,454,184...22,462,936
JBrowse link
intramanchette transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEP131 centrosomal protein 131 ISO (MGI:5647985|PMID:24415959) MGI PMID:24415959 MGI:5647985 NCBI chr12:1,537,900...1,556,931
Ensembl chr12:1,538,326...1,556,930
JBrowse link
manchette assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEP131 centrosomal protein 131 ISO (MGI:5647985|PMID:24415959) MGI PMID:24415959 MGI:5647985 NCBI chr12:1,537,900...1,556,931
Ensembl chr12:1,538,326...1,556,930
JBrowse link
G HOOK1 hook microtubule tethering protein 1 ISO (MGI:3040520|PMID:9674995), (MGI:3624076|PMID:16540102) MGI PMID:9674995, PMID:16540102 MGI:3040520, MGI:3624076 NCBI chr 6:152,636,118...152,709,422 JBrowse link
G MEIG1 meiosis/spermiogenesis associated 1 ISO (MGI:5475083|PMID:23258628) MGI PMID:23258628 MGI:5475083 NCBI chr10:46,771,820...46,800,955 JBrowse link
G TTC26 tetratricopeptide repeat domain 26 IEA Ensembl GO_REF:0000107 NCBI chr18:10,462,670...10,509,595
Ensembl chr18:10,462,670...10,509,567
JBrowse link
manchette disassembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RSPH6A radial spoke head 6 homolog A IEA Ensembl GO_REF:0000107 NCBI chr 6:52,118,695...52,139,183
Ensembl chr 6:52,118,429...52,140,478
JBrowse link
negative regulation of sperm capacitation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAEP progestagen associated endometrial protein ISO (PMID:15883155) UniProtKB PMID:15883155
positive regulation of flagellated sperm motility involved in capacitation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCR6 C-C motif chemokine receptor 6 IEA Ensembl GO_REF:0000107 NCBI chr 1:2,016,600...2,034,172
Ensembl chr 1:2,018,608...2,019,821
JBrowse link
G DEFB1 defensin beta 1 IEA Ensembl GO_REF:0000107
G DEFB1 defensin, beta 1 ISS UniProt GO_REF:0000024 NCBI chr15:38,076,057...38,077,899
Ensembl chr15:38,076,033...38,077,921
JBrowse link
G LOC100620649 IQ domain-containing protein F1 IEA Ensembl GO_REF:0000107 NCBI chr13:34,057,694...34,059,552
Ensembl chr13:34,057,694...34,059,385
JBrowse link
G RNASE9 ribonuclease A family member 9 (inactive) ISO (MGI:5582126|PMID:24719258) MGI PMID:24719258 MGI:5582126 NCBI chr 7:78,341,091...78,367,308 JBrowse link
proacrosomal vesicle fusion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KIAA0319L KIAA0319 like ISO (MGI:6198830|PMID:29991750) MGI PMID:29991750 MGI:6198830 NCBI chr 6:91,630,664...91,747,790
Ensembl chr 6:91,605,502...91,747,773
JBrowse link
G SOX30 SRY-box transcription factor 30 IEA Ensembl GO_REF:0000107 NCBI chr16:65,642,107...65,677,693
Ensembl chr16:65,642,422...65,677,088
JBrowse link
regulation of sperm capacitation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TCP11 t-complex 11 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:31,007,460...31,161,082
Ensembl chr 7:30,994,661...31,161,045
JBrowse link
sperm axoneme assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARMC2 armadillo repeat containing 2 IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 1:74,923,824...75,081,742
Ensembl chr 1:74,923,842...75,116,784
JBrowse link
G BBS2 Bardet-Biedl syndrome 2 IEA Ensembl GO_REF:0000107 NCBI chr 6:18,542,383...18,575,338
Ensembl chr 6:18,542,383...18,575,524
JBrowse link
G CEP131 centrosomal protein 131 ISO (MGI:5647985|PMID:24415959) MGI PMID:24415959 MGI:5647985 NCBI chr12:1,537,900...1,556,931
Ensembl chr12:1,538,326...1,556,930
JBrowse link
G CFAP157 cilia and flagella associated protein 157 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:268,209,190...268,213,909
Ensembl chr 1:268,209,396...268,213,921
JBrowse link
G CFAP206 cilia and flagella associated protein 206 ISO (MGI:6452763|PMID:32376681) UniProt PMID:32376681 MGI:6452763 NCBI chr 1:55,821,511...55,854,203 JBrowse link
G CFAP43 cilia and flagella associated protein 43 IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr14:115,073,529...115,201,965
Ensembl chr14:115,073,529...115,174,043
JBrowse link
G CFAP44 cilia and flagella associated protein 44 IEA Ensembl GO_REF:0000107 NCBI chr13:146,471,979...146,628,535
Ensembl chr13:146,474,209...146,623,356
JBrowse link
G CFAP65 cilia and flagella associated protein 65 IEA Ensembl GO_REF:0000107 NCBI chr15:121,026,365...121,067,224
Ensembl chr15:121,026,245...121,067,210
JBrowse link
G CFAP69 cilia and flagella associated protein 69 ISO (PMID:30415212)
(MGI:6431182|PMID:30415212)
MGI PMID:30415212 MGI:6431182 NCBI chr 9:70,373,422...70,430,383
Ensembl chr 9:70,335,206...70,430,389
JBrowse link
G CFAP97D1 CFAP97 domain containing 1 ISO (MGI:6452255|PMID:32785227) UniProt PMID:32785227 MGI:6452255 NCBI chr12:19,330,354...19,336,221
Ensembl chr12:19,330,950...19,334,824
JBrowse link
G DNAH1 dynein axonemal heavy chain 1 IEA Ensembl GO_REF:0000107 NCBI chr13:34,455,154...34,544,147
Ensembl chr13:34,445,336...34,544,149
JBrowse link
G FSIP2 fibrous sheath interacting protein 2 ISO (PMID:30137358), (PMID:30745215) UniProt PMID:30137358, PMID:30745215 NCBI chr15:90,902,067...91,000,873 JBrowse link
G IFT88 intraflagellar transport 88 ISO (MGI:4939808|PMID:21337470) MGI PMID:21337470 MGI:4939808 NCBI chr11:943,444...1,025,617
Ensembl chr11:943,469...1,022,953
JBrowse link
G IQCG IQ motif containing G IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr13:134,540,048...134,588,122
Ensembl chr13:134,536,091...134,588,049
JBrowse link
G MEIG1 meiosis/spermiogenesis associated 1 ISO (MGI:5475083|PMID:23258628) MGI PMID:23258628 MGI:5475083 NCBI chr10:46,771,820...46,800,955 JBrowse link
G NEURL1 neuralized E3 ubiquitin protein ligase 1 IEA Ensembl GO_REF:0000107 NCBI chr14:114,436,887...114,515,713
Ensembl chr14:114,436,537...114,516,721
JBrowse link
G PLA2G3 phospholipase A2 group III IEA Ensembl GO_REF:0000107 NCBI chr14:47,923,005...47,928,762
Ensembl chr14:47,923,787...47,928,810
JBrowse link
G SPAG16 sperm associated antigen 16 IEA Ensembl GO_REF:0000107 NCBI chr15:115,809,152...116,760,976
Ensembl chr15:115,809,180...116,760,790
JBrowse link
G SPAG6 sperm associated antigen 6 IEA Ensembl GO_REF:0000107 NCBI chr10:52,496,457...52,571,977
Ensembl chr10:52,494,755...52,572,010
JBrowse link
G SPEF2 sperm flagellar 2 ISS
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000024 NCBI chr16:21,088,463...21,264,591
Ensembl chr16:21,088,292...21,264,853
JBrowse link
G TPGS1 tubulin polyglutamylase complex subunit 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:77,776,269...77,783,434
Ensembl chr 2:77,775,303...77,783,424
JBrowse link
G TTC12 tetratricopeptide repeat domain 12 ISO (PMID:31978331) UniProt PMID:31978331 NCBI chr 9:40,988,881...41,032,928
Ensembl chr 9:40,988,918...41,046,900
JBrowse link
G TTLL1 tubulin tyrosine ligase like 1 IEA Ensembl GO_REF:0000107 NCBI chr 5:5,793,760...5,827,622
Ensembl chr 5:5,793,780...5,827,639
JBrowse link
G TTLL5 tubulin tyrosine ligase like 5 ISO (MGI:5498425|PMID:23558686) MGI PMID:23558686 MGI:5498425 NCBI chr 7:98,822,338...99,090,076
Ensembl chr 7:98,822,306...99,130,915
JBrowse link
G UBE2B ubiquitin conjugating enzyme E2 B IEA Ensembl GO_REF:0000107 NCBI chr 2:136,652,764...136,667,213
Ensembl chr 2:136,652,784...136,667,949
JBrowse link
sperm capacitation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABHD2 abhydrolase domain containing 2, acylglycerol lipase IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 7:54,655,694...54,776,140
Ensembl chr 7:54,655,726...54,837,484
JBrowse link
G ACRBP acrosin binding protein TAS (PMID:15955892) UniProt PMID:15955892 NCBI chr 5:64,036,810...64,047,846
Ensembl chr 5:64,027,876...64,047,847
JBrowse link
G BSP1 binder of sperm 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:50,278,750...50,280,780
Ensembl chr 6:50,278,436...50,280,779
JBrowse link
G BSPH1 binder of sperm protein homolog 1 IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 6:53,566,334...53,570,282
Ensembl chr 6:53,566,517...53,569,308
JBrowse link
G CABYR calcium binding tyrosine phosphorylation regulated IEA InterPro GO_REF:0000002 NCBI chr 6:108,971,340...108,997,295
Ensembl chr 6:108,909,974...108,997,299
JBrowse link
G CATSPER2 cation channel sperm associated 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:127,814,349...127,831,023
Ensembl chr 1:127,814,343...127,829,436
JBrowse link
G CATSPER3 cation channel sperm associated 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:137,139,743...137,175,305
Ensembl chr 2:137,139,720...137,175,305
JBrowse link
G CATSPER4 cation channel sperm associated 4 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:83,607,607...83,627,860
Ensembl chr 6:83,609,395...83,627,855
JBrowse link
G CATSPERD cation channel sperm associated auxiliary subunit delta ISO (MGI:5315675|PMID:21224844) UniProt PMID:21224844 MGI:5315675 NCBI chr 2:73,207,458...73,266,158
Ensembl chr 2:73,207,892...73,266,302
JBrowse link
G CATSPERZ catsper channel auxiliary subunit zeta IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 2:7,813,296...7,817,327 JBrowse link
G CFTR CF transmembrane conductance regulator ISS
IEA
UniProt
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr18:28,627,717...28,818,209
Ensembl chr18:28,627,728...28,817,950
JBrowse link
G DLD dihydrolipoamide dehydrogenase IEA Ensembl GO_REF:0000107 NCBI chr 9:107,642,129...107,668,443
Ensembl chr 9:107,642,095...107,673,583
JBrowse link
G EFCAB9 EF-hand calcium binding domain 9 ISO (MGI:6316499|PMID:31056283) UniProt PMID:31056283 MGI:6316499 NCBI chr16:51,987,090...51,996,019 JBrowse link
G ELSPBP1 epididymal sperm binding protein 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:53,583,965...53,603,746
Ensembl chr 6:53,583,965...53,603,366
JBrowse link
G PCSK4 proprotein convertase subtilisin/kexin type 4 IEA Ensembl GO_REF:0000107 NCBI chr 2:76,982,806...76,996,507
Ensembl chr 2:76,989,641...76,996,509
JBrowse link
G PEBP1 phosphatidylethanolamine binding protein 1 IEA Ensembl GO_REF:0000107 NCBI chr14:34,523,901...34,530,238 JBrowse link
G PRKACA protein kinase cAMP-activated catalytic subunit alpha IEA Ensembl GO_REF:0000107 NCBI chr 2:65,074,876...65,095,564
Ensembl chr 2:65,074,870...65,095,553
JBrowse link
G ROPN1 rhophilin associated tail protein 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:136,395,628...136,428,170 JBrowse link
G ROPN1L rhophilin associated tail protein 1 like IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:43,299...58,569
Ensembl chr16:43,353...63,236
JBrowse link
G SEPTIN4 septin 4 IEA Ensembl GO_REF:0000107 NCBI chr12:34,772,776...34,785,176 JBrowse link
G SLC26A3 solute carrier family 26 member 3 IEA Ensembl GO_REF:0000107 NCBI chr 9:107,480,629...107,518,771
Ensembl chr 9:107,480,641...107,518,728
JBrowse link
G SLC26A6 solute carrier family 26 member 6 ISO (MGI:5429843|PMID:21976599) UniProt PMID:21976599 MGI:5429843 NCBI chr13:31,319,287...31,330,649
Ensembl chr13:31,317,877...31,330,602
JBrowse link
G SLC26A8 solute carrier family 26 member 8 IEA InterPro GO_REF:0000002 NCBI chr 7:31,722,409...31,791,620
Ensembl chr 7:31,722,990...31,792,904
JBrowse link
G SPINK1 serine peptidase inhibitor Kazal type 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:149,072,652...149,079,529
Ensembl chr 2:149,071,703...149,079,499
JBrowse link
sperm chromatin condensation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FSHR follicle stimulating hormone receptor ISO (MGI:1855818|PMID:10775161) MGI PMID:10775161 MGI:1855818 NCBI chr 3:91,607,236...91,775,255
Ensembl chr 3:91,607,305...91,774,683
JBrowse link
G LOC100516553 testis-specific H1 histone ISO (MGI:3531623|PMID:15710904) UniProt PMID:15710904 MGI:3531623 NCBI chr 5:78,699,291...78,700,227
Ensembl chr 5:78,699,128...78,700,333
JBrowse link
G SELENOF selenoprotein F ISO RGD PMID:11344099 RGD:728803 NCBI chr 4:129,258,943...129,287,727
Ensembl chr 4:129,258,944...129,287,720
JBrowse link
G SYCP1 synaptonemal complex protein 1 IEA Ensembl GO_REF:0000107 NCBI chr 4:105,592,354...105,730,413
Ensembl chr 4:105,592,691...105,729,774
JBrowse link
G SYCP3 synaptonemal complex protein 3 ISO (MGI:5315075|PMID:22164254) MGI PMID:22164254 MGI:5315075 NCBI chr 5:82,492,744...82,501,068
Ensembl chr 5:82,493,142...82,501,225
JBrowse link
G TSSK6 testis specific serine kinase 6 IEA Ensembl GO_REF:0000107 NCBI chr 2:58,411,122...58,411,943
Ensembl chr 2:58,411,122...58,411,943
JBrowse link
spermatid nucleus differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGFG1 ArfGAP with FG repeats 1 IEA Ensembl GO_REF:0000107 NCBI chr15:128,898,806...128,980,782
Ensembl chr15:128,898,621...128,975,520
JBrowse link
G GOPC golgi associated PDZ and coiled-coil motif containing IEA Ensembl GO_REF:0000107 NCBI chr 1:44,239,364...44,285,886
Ensembl chr 1:44,239,383...44,287,198
JBrowse link
G HMGB2 high mobility group box 2 ISS AgBase GO_REF:0000024 NCBI chr14:16,709,966...16,712,288
Ensembl chr14:16,710,047...16,717,126
JBrowse link
G MFSD14A major facilitator superfamily domain containing 14A IEA Ensembl GO_REF:0000107 NCBI chr 4:118,049,094...118,090,374
Ensembl chr 4:118,049,098...118,090,350
JBrowse link
G NECTIN2 nectin cell adhesion molecule 2 ISO (MGI:1354802|PMID:10733589) MGI PMID:10733589 MGI:1354802 NCBI chr 6:51,317,386...51,358,665 JBrowse link
G PBXIP1 PBX homeobox interacting protein 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:94,837,365...94,847,652
Ensembl chr 4:94,832,270...94,847,648
JBrowse link
G PYGO1 pygopus family PHD finger 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:116,293,361...116,326,753
Ensembl chr 1:116,292,642...116,322,415
JBrowse link
G TBPL1 TATA-box binding protein like 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:29,899,956...29,936,773
Ensembl chr 1:29,899,957...29,936,718
JBrowse link
G TMF1 TATA element modulatory factor 1 IEA Ensembl GO_REF:0000107 NCBI chr13:50,442,017...50,477,363
Ensembl chr13:50,444,256...50,477,291
JBrowse link
spermatid nucleus elongation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DMRTC2 DMRT like family C2 IEA Ensembl GO_REF:0000107 NCBI chr 6:50,011,312...50,017,513
Ensembl chr 6:49,871,136...50,016,315
JBrowse link
G IFT88 intraflagellar transport 88 ISO (MGI:4939808|PMID:21337470) MGI PMID:21337470 MGI:4939808 NCBI chr11:943,444...1,025,617
Ensembl chr11:943,469...1,022,953
JBrowse link
G KDM3A lysine demethylase 3A IEA Ensembl GO_REF:0000107 NCBI chr 3:58,300,109...58,355,000
Ensembl chr 3:58,299,706...58,354,941
JBrowse link
G LOC100516553 testis-specific H1 histone ISO (MGI:3531623|PMID:15710904) UniProt PMID:15710904 MGI:3531623 NCBI chr 5:78,699,291...78,700,227
Ensembl chr 5:78,699,128...78,700,333
JBrowse link
G TNP1 transition protein 1 ISS
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000024 NCBI chr15:119,037,492...119,038,099
Ensembl chr15:119,037,496...119,038,105
JBrowse link
spermatogenesis, exchange of chromosomal proteins term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHD5 chromodomain helicase DNA binding protein 5 ISO (MGI:5559810|PMID:24252660) UniProt PMID:24252660 MGI:5559810 NCBI chr 6:67,017,410...67,086,685
Ensembl chr 6:67,017,425...67,087,043
JBrowse link
G FSHR follicle stimulating hormone receptor IEA Ensembl GO_REF:0000107 NCBI chr 3:91,607,236...91,775,255
Ensembl chr 3:91,607,305...91,774,683
JBrowse link
G LOC100152135 histone H2B type 1-A-like IEA Ensembl GO_REF:0000107 NCBI chr 7:20,465,043...20,466,398
Ensembl chr 7:20,465,129...20,465,512
JBrowse link
G PIWIL1 piwi like RNA-mediated gene silencing 1 IEA Ensembl GO_REF:0000107 NCBI chr14:24,729,346...24,760,056
Ensembl chr14:24,730,053...24,760,013
JBrowse link
G PSME4 proteasome activator subunit 4 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:87,231,510...87,337,709
Ensembl chr 3:87,231,534...87,337,703
JBrowse link
G RNF8 ring finger protein 8 ISO (MGI:5905675|PMID:28552346) UniProt PMID:28552346 MGI:5905675 NCBI chr 7:32,931,786...32,969,536
Ensembl chr 7:32,931,786...33,063,739
JBrowse link
G SYCP3 synaptonemal complex protein 3 IEA Ensembl GO_REF:0000107 NCBI chr 5:82,492,744...82,501,068
Ensembl chr 5:82,493,142...82,501,225
JBrowse link
G TNP1 transition protein 1 ISS UniProt GO_REF:0000024 NCBI chr15:119,037,492...119,038,099
Ensembl chr15:119,037,496...119,038,105
JBrowse link
G TNP2 transition protein 2 ISS UniProt GO_REF:0000024 NCBI chr 3:31,868,517...31,871,530
Ensembl chr 3:31,870,068...31,871,702
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16548
    cellular process 15780
      cellular process involved in reproduction in multicellular organism 432
        germ cell development 313
          spermatid development 183
            Nebenkern assembly 0
            acrosome assembly + 20
            intramanchette transport 1
            manchette assembly 4
            manchette disassembly 1
            sperm axoneme assembly 25
            sperm capacitation + 31
            sperm individualization 0
            spermatid nucleus differentiation + 25
Path 2
Term Annotations click to browse term
  biological_process 16548
    reproduction 1615
      reproductive process 1613
        multi-organism reproductive process 1072
          sexual reproduction 865
            gamete generation 701
              male gamete generation 533
                spermatogenesis 511
                  spermatid differentiation 191
                    spermatid development 183
                      Nebenkern assembly 0
                      acrosome assembly + 20
                      intramanchette transport 1
                      manchette assembly 4
                      manchette disassembly 1
                      sperm axoneme assembly 25
                      sperm capacitation + 31
                      sperm individualization 0
                      spermatid nucleus differentiation + 25
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.