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ONTOLOGY REPORT - ANNOTATIONS


Term:spermatid nucleus differentiation
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Accession:GO:0007289 term browser browse the term
Definition:The specialization of the spermatid nucleus during the development of a spermatid into a mature male gamete competent for fertilization.
Comment:See also the Cell Ontology term 'spermatid ; CL:0000018'.
Synonyms:exact_synonym: spermatid nuclear differentiation


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spermatid nucleus differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agfg1 ArfGAP with FG repeats 1 JBrowse link 9 88,607,508 88,663,486 RGD:1624291
RGD:1600115
G Gopc golgi associated PDZ and coiled-coil motif containing JBrowse link 20 33,471,355 33,521,281 RGD:1624291
G Hmgb2 high mobility group box 2 JBrowse link 16 36,077,615 36,080,191 RGD:1624291
G Mfsd14a major facilitator superfamily domain containing 14A JBrowse link 2 219,661,204 219,697,548 RGD:1624291
G Nectin2 nectin cell adhesion molecule 2 JBrowse link 1 80,631,449 80,666,617 RGD:1624291
RGD:1600115
G Pygo1 pygopus family PHD finger 1 JBrowse link 8 79,607,013 79,625,188 RGD:1624291
RGD:13792537
G Pygo2 pygopus family PHD finger 2 JBrowse link 2 188,757,167 188,762,285 RGD:1624291
RGD:13792537
G Tbpl1 TATA-box binding protein like 1 JBrowse link 1 23,977,154 24,002,512 RGD:1624291
RGD:1600115
G Tmf1 TATA element modulatory factor 1 JBrowse link 4 129,521,986 129,546,024 RGD:1624291
RGD:1600115
sperm chromatin condensation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fshr follicle stimulating hormone receptor JBrowse link 6 12,796,383 12,997,817 RGD:1624291
G H1f7 H1.7 linker histone JBrowse link 7 139,871,491 139,872,858 RGD:1624291
RGD:1600115
G Selenof selenoprotein F JBrowse link 2 250,600,823 250,633,903 RGD:728803
G Sycp1 synaptonemal complex protein 1 JBrowse link 2 205,274,766 205,426,869 RGD:1624291
RGD:1600115
G Sycp3 synaptonemal complex protein 3 JBrowse link 7 29,029,887 29,044,344 RGD:1624291
G Tssk6 testis-specific serine kinase 6 JBrowse link 16 21,272,282 21,274,756 RGD:1624291
RGD:1600115
spermatid nucleus elongation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dmrtc2 DMRT-like family C2 JBrowse link 1 81,734,256 81,741,419 RGD:1624291
G H1f7 H1.7 linker histone JBrowse link 7 139,871,491 139,872,858 RGD:1624291
RGD:1600115
G Ift88 intraflagellar transport 88 JBrowse link 15 37,690,417 37,786,855 RGD:1624291
G Kdm3a lysine demethylase 3A JBrowse link 4 99,503,160 99,547,315 RGD:1624291
RGD:1600115
G Tnp1 transition protein 1 JBrowse link 9 80,294,837 80,295,446 RGD:1624291
RGD:13792537
RGD:1600115
spermatogenesis, exchange of chromosomal proteins term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chd5 chromodomain helicase DNA binding protein 5 JBrowse link 5 169,519,212 169,572,059 RGD:1624291
RGD:1600115
G Fshr follicle stimulating hormone receptor JBrowse link 6 12,796,383 12,997,817 RGD:1624291
RGD:1600115
G H2bc1 H2B clustered histone 1 JBrowse link 17 43,423,111 43,423,580 RGD:1624291
RGD:1600115
G Piwil1 piwi-like RNA-mediated gene silencing 1 JBrowse link 12 31,608,641 31,629,961 RGD:1624291
RGD:1600115
G Psme4 proteasome activator subunit 4 JBrowse link 14 115,166,165 115,269,041 RGD:1624291
RGD:13792537
G Rnf8 ring finger protein 8 JBrowse link 20 8,285,380 8,309,858 RGD:1624291
RGD:1600115
G Sycp3 synaptonemal complex protein 3 JBrowse link 7 29,029,887 29,044,344 RGD:1624291
RGD:1600115
G Tnp1 transition protein 1 JBrowse link 9 80,294,837 80,295,446 RGD:1600115
RGD:1624291
G Tnp2 transition protein 2 JBrowse link 10 4,953,898 4,954,626 RGD:1600115
RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18166
    cellular process 16266
      cellular process involved in reproduction in multicellular organism 418
        spermatid nucleus differentiation 25
          negative regulation of spermatid nuclear differentiation 0
          positive regulation of spermatid nuclear differentiation 0
          regulation of spermatid nuclear differentiation + 0
          sperm chromatin condensation + 13
          spermatid nucleus elongation 5
Path 2
Term Annotations click to browse term
  biological_process 18166
    reproduction 1685
      reproductive process 1682
        multi-organism reproductive process 1168
          sexual reproduction 919
            gamete generation 758
              male gamete generation 589
                spermatogenesis 569
                  spermatid differentiation 197
                    spermatid development 189
                      spermatid nucleus differentiation 25
                        negative regulation of spermatid nuclear differentiation 0
                        positive regulation of spermatid nuclear differentiation 0
                        regulation of spermatid nuclear differentiation + 0
                        sperm chromatin condensation + 13
                        spermatid nucleus elongation 5
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.