ONTOLOGY REPORT - ANNOTATIONS


Term:pattern specification process
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Accession:GO:0007389 term browser browse the term
Definition:Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate.
Synonyms:related_synonym: pattern biosynthesis;   pattern formation


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pattern specification process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACVR1 activin A receptor type 1 JBrowse link 2B 162,234,823 162,372,533 RGD:9068941
G ACVR1B activin A receptor type 1B JBrowse link 12 37,541,867 37,563,487 RGD:9068941
G ACVR1C activin A receptor type 1C JBrowse link 2B 162,027,016 162,080,583 RGD:9068941
G ACVR2A activin A receptor type 2A JBrowse link 2B 152,253,843 152,288,385 RGD:9068941
G ACVR2B activin A receptor type 2B JBrowse link 3 38,633,097 38,671,843 RGD:9068941
G ACVRL1 activin A receptor like type 1 JBrowse link 12 37,615,888 37,631,691 RGD:9068941
G ALX3 ALX homeobox 3 JBrowse link 1 127,624,197 127,640,181 RGD:9068941
G AMHR2 anti-Mullerian hormone receptor type 2 JBrowse link 12 36,107,363 36,115,175 RGD:9068941
G APC APC regulator of WNT signaling pathway JBrowse link 5 113,873,993 114,009,709 RGD:9068941
G APC2 APC regulator of WNT signaling pathway 2 JBrowse link 19 1,421,433 1,445,686 RGD:9068941
G ASPH aspartate beta-hydroxylase JBrowse link 8 59,629,707 59,843,921 RGD:9068941
G BMP5 bone morphogenetic protein 5 JBrowse link 6 56,936,871 57,058,801 RGD:9068941
G BMPR1A bone morphogenetic protein receptor type 1A JBrowse link 10 86,742,248 86,912,912 RGD:9068941
G BMPR1B bone morphogenetic protein receptor type 1B JBrowse link 4 97,912,541 98,194,890 RGD:9068941
G BMPR2 bone morphogenetic protein receptor type 2 JBrowse link 2B 207,780,568 207,968,900 RGD:9068941
G DCHS1 dachsous cadherin-related 1 JBrowse link 11 6,436,082 6,456,464 RGD:9068941
G EYA1 EYA transcriptional coactivator and phosphatase 1 JBrowse link 8 69,387,769 69,551,829 RGD:9068941
G FOXJ1 forkhead box J1 JBrowse link 17 75,637,615 75,642,571 RGD:9068941
G GLI2 GLI family zinc finger 2 JBrowse link 2B 121,242,932 121,499,411 RGD:9068941
G GRHL3 grainyhead like transcription factor 3 JBrowse link 1 24,502,294 24,538,090 RGD:9068941
G HOXB1 homeobox B1 JBrowse link 17 9,190,137 9,191,696 RGD:9068941
G HOXD12 homeobox D12 JBrowse link 2B 181,089,181 181,091,055 RGD:9068941
G LHX1 LIM homeobox 1 JBrowse link 17 20,430,618 20,437,751 RGD:9068941
G MFNG MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase JBrowse link 22 36,218,403 36,236,402 RGD:9068941
G MID1 midline 1 JBrowse link X 10,328,476 10,715,914 RGD:9068941
G NRG3 neuregulin 3 JBrowse link 10 81,862,024 82,974,743 RGD:9068941
G RAX retina and anterior neural fold homeobox JBrowse link 18 55,990,984 55,995,469 RGD:9068941
G RFNG RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase JBrowse link 17 82,157,424 82,160,947 RGD:9068941
G RNF111 ring finger protein 111 JBrowse link 15 56,212,580 56,374,485 RGD:9068941
G SHH sonic hedgehog signaling molecule JBrowse link 7 159,116,966 159,126,660 RGD:9068941
G SHROOM3 shroom family member 3 JBrowse link 4 53,256,674 53,607,120 RGD:9068941
G SIX1 SIX homeobox 1 JBrowse link 14 59,515,324 59,518,740 RGD:9068941
G SOSTDC1 sclerostin domain containing 1 JBrowse link 7 16,443,703 16,448,076 RGD:9068941
G SYNGAP1 synaptic Ras GTPase activating protein 1 JBrowse link 6 34,111,285 34,144,490 RGD:9068941
G TBX1 T-box 1 JBrowse link 22 18,192,954 18,213,786 RGD:9068941
G TBX5 T-box 5 JBrowse link 12 115,336,267 115,389,739 RGD:9068941
G TGFBR1 transforming growth factor beta receptor 1 JBrowse link 9 98,337,417 98,362,748 RGD:9068941
G TGFBR2 transforming growth factor beta receptor 2 JBrowse link 3 30,854,071 30,941,378 RGD:9068941
G UNCX UNC homeobox JBrowse link 7 1,604,294 1,615,634 RGD:9068941
G ZEB1 zinc finger E-box binding homeobox 1 JBrowse link 10 32,043,863 32,253,550 RGD:9068941
G ZIC1 Zic family member 1 JBrowse link 3 152,019,288 152,024,497 RGD:9068941
activation of prostate induction by androgen receptor signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AR androgen receptor JBrowse link X 66,790,419 66,975,921 RGD:9068941
anterior compartment pattern formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PBX3 PBX homeobox 3 JBrowse link 9 125,379,110 125,599,634 RGD:9068941
anterior/posterior axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AURKA aurora kinase A JBrowse link 20 53,994,880 54,017,381 RGD:9068941
G BMP4 bone morphogenetic protein 4 JBrowse link 14 52,821,872 52,828,781 RGD:9068941
G CDX1 caudal type homeobox 1 JBrowse link 5 151,596,478 151,614,257 RGD:9068941
G CDX2 caudal type homeobox 2 JBrowse link 13 27,585,194 27,593,632 RGD:9068941
G CDX4 caudal type homeobox 4 JBrowse link X 72,796,815 72,804,511 RGD:9068941
G CER1 cerberus 1, DAN family BMP antagonist JBrowse link 9 15,063,766 15,066,776 RGD:9068941
G CTNNB1 catenin beta 1 JBrowse link 3 41,372,368 41,414,030 RGD:9068941
G GPC3 glypican 3 JBrowse link X 132,979,890 133,432,266 RGD:9068941
G HEY2 hes related family bHLH transcription factor with YRPW motif 2 JBrowse link 6 127,647,547 127,659,056 RGD:9068941
G LDB1 LIM domain binding 1 JBrowse link 10 102,176,744 102,191,745 RGD:9068941
G LHX1 LIM homeobox 1 JBrowse link 17 20,430,618 20,437,751 RGD:9068941
G PGAP1 post-GPI attachment to proteins 1 JBrowse link 2B 201,975,318 202,063,853 RGD:9068941
G RNF2 ring finger protein 2 JBrowse link 1 164,721,554 164,779,420 RGD:9068941
G SIX2 SIX homeobox 2 JBrowse link 2A 46,040,067 46,044,029 RGD:9068941
G SKI SKI proto-oncogene JBrowse link 1 2,091,620 2,174,080 RGD:9068941
G WLS Wnt ligand secretion mediator JBrowse link 1 69,291,878 69,425,652 RGD:9068941
G WNT3 Wnt family member 3 JBrowse link 17 10,862,310 10,918,865 RGD:9068941
anterior/posterior axis specification, embryo term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FRS2 fibroblast growth factor receptor substrate 2 JBrowse link 12 69,767,526 69,878,293 RGD:9068941
G FZD5 frizzled class receptor 5 JBrowse link 2B 213,128,615 213,135,569 RGD:9068941
G HOXD8 homeobox D8 JBrowse link 2B 181,118,425 181,121,281 RGD:9068941
G TBX3 T-box 3 JBrowse link 12 115,618,420 115,632,327 RGD:9068941
G TBXT T-box transcription factor T JBrowse link 6 169,095,723 169,106,595 RGD:9068941
G TDGF1 teratocarcinoma-derived growth factor 1 JBrowse link 3 47,577,949 47,583,126 RGD:9068941
G WNT5A Wnt family member 5A JBrowse link 3 56,617,006 56,639,367 RGD:9068941
anterior/posterior pattern specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACVR2A activin A receptor type 2A JBrowse link 2B 152,253,843 152,288,385 RGD:9068941
G ACVR2B activin A receptor type 2B JBrowse link 3 38,633,097 38,671,843 RGD:9068941
G ALX1 ALX homeobox 1 JBrowse link 12 85,902,113 85,923,781 RGD:9068941
G ALX4 ALX homeobox 4 JBrowse link 11 44,714,503 44,729,758 RGD:9068941
G ARC activity regulated cytoskeleton associated protein JBrowse link 8 142,365,962 142,369,309 RGD:9068941
G BARX1 BARX homeobox 1 JBrowse link 9 93,133,691 93,212,391 RGD:9068941
G BMPR2 bone morphogenetic protein receptor type 2 JBrowse link 2B 207,780,568 207,968,900 RGD:9068941
G BPTF bromodomain PHD finger transcription factor JBrowse link 17 66,955,717 67,111,521 RGD:9068941
G BTG2 BTG anti-proliferation factor 2 JBrowse link 1 183,201,297 183,205,404 RGD:9068941
G CDON cell adhesion associated, oncogene regulated JBrowse link 11 124,685,084 124,789,649 RGD:9068941
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 JBrowse link 22 45,427,275 45,604,286 RGD:9068941
G CER1 cerberus 1, DAN family BMP antagonist JBrowse link 9 15,063,766 15,066,776 RGD:9068941
G CRKL CRK like proto-oncogene, adaptor protein JBrowse link 22 19,632,359 19,668,858 RGD:9068941
G CTNNBIP1 catenin beta interacting protein 1 JBrowse link 1 9,846,511 9,882,049 RGD:9068941
G EMX2 empty spiracles homeobox 2 JBrowse link 10 117,551,451 117,557,972 RGD:9068941
G GLI2 GLI family zinc finger 2 JBrowse link 2B 121,242,932 121,499,411 RGD:9068941
G GLI3 GLI family zinc finger 3 JBrowse link 7 42,056,566 42,322,865 RGD:9068941
G GRSF1 G-rich RNA sequence binding factor 1 JBrowse link 4 59,731,442 59,751,332 RGD:9068941
G HHEX hematopoietically expressed homeobox JBrowse link 10 92,947,373 92,952,992 RGD:9068941
G HIPK1 homeodomain interacting protein kinase 1 JBrowse link 1 123,629,271 123,677,714 RGD:9068941
G HIPK2 homeodomain interacting protein kinase 2 JBrowse link 7 143,991,085 144,149,159 RGD:9068941
G HNF1B HNF1 homeobox B JBrowse link 17 19,633,424 19,691,863 RGD:9068941
G HOXA10 homeobox A10 JBrowse link 7 27,414,527 27,418,240 RGD:9068941
G HOXA11 homeobox A11 JBrowse link 7 27,426,602 27,429,092 RGD:9068941
G HOXA2 homeobox A2 JBrowse link 7 27,344,100 27,346,794 RGD:9068941
G HOXA3 homeobox A3 JBrowse link 7 27,350,491 27,371,169 RGD:9068941
G HOXA4 homeobox A4 JBrowse link 7 27,372,664 27,374,961 RGD:9068941
G HOXA5 homeobox A5 JBrowse link 7 27,385,175 27,388,990 RGD:9068941
G HOXA6 homeobox A6 JBrowse link 7 27,389,679 27,391,997 RGD:9068941
G HOXA7 homeobox A7 JBrowse link 7 27,397,888 27,402,142 RGD:9068941
G HOXA9 homeobox A9 JBrowse link 7 27,406,624 27,409,984 RGD:9068941
G HOXB1 homeobox B1 JBrowse link 17 9,190,137 9,191,696 RGD:9068941
G HOXB2 homeobox B2 JBrowse link 17 9,176,313 9,178,713 RGD:9068941
G HOXB3 homeobox B3 JBrowse link 17 9,131,587 9,172,501 RGD:9068941
G HOXB4 homeobox B4 JBrowse link 17 9,143,173 9,146,161 RGD:9068941
G HOXB5 homeobox B5 JBrowse link 17 9,127,630 9,130,616 RGD:9068941
G HOXB6 homeobox B6 JBrowse link 17 9,116,886 9,126,150 RGD:9068941
G HOXB7 homeobox B7 JBrowse link 17 9,110,864 9,114,648 RGD:9068941
G HOXB8 homeobox B8 JBrowse link 17 9,106,662 9,109,540 RGD:9068941
G HOXB9 homeobox B9 JBrowse link 17 9,095,438 9,100,755 RGD:9068941
G HOXC10 homeobox C10 JBrowse link 12 35,553,262 35,558,393 RGD:9068941
G HOXC11 homeobox C11 JBrowse link 12 35,567,093 35,570,396 RGD:9068941
G HOXC13 homeobox C13 JBrowse link 12 35,596,821 35,604,560 RGD:9068941
G HOXC4 homeobox C4 JBrowse link 12 35,487,619 35,489,853 RGD:9068941
G HOXC5 homeobox C5 JBrowse link 12 35,508,711 35,510,388 RGD:9068941
G HOXC6 homeobox C6 JBrowse link 12 35,512,691 35,526,627 RGD:9068941
G HOXC8 homeobox C8 JBrowse link 12 35,531,176 35,534,420 RGD:9068941
G HOXC9 homeobox C9 JBrowse link 12 35,540,234 35,543,486 RGD:9068941
G HOXD10 homeobox D10 JBrowse link 2B 181,104,876 181,108,942 RGD:9068941
G HOXD13 homeobox D13 JBrowse link 2B 181,081,518 181,085,295 RGD:9068941
G HOXD3 homeobox D3 JBrowse link 2B 181,141,538 181,161,604 RGD:9068941
G HOXD9 homeobox D9 JBrowse link 2B 181,111,939 181,114,176 RGD:9068941
G KIF3A kinesin family member 3A JBrowse link 5 134,268,505 134,315,431 RGD:9068941
G LHX1 LIM homeobox 1 JBrowse link 17 20,430,618 20,437,751 RGD:9068941
G LOC100989646 cytochrome P450 26C1 JBrowse link 10 93,317,798 93,325,315 RGD:9068941
G LRP5 LDL receptor related protein 5 JBrowse link 11 66,794,645 66,840,019 RGD:9068941
G LRP5L LDL receptor related protein 5 like JBrowse link 22 23,957,773 24,061,253 RGD:9068941
G LRP6 LDL receptor related protein 6 JBrowse link 12 12,508,108 12,658,074 RGD:9068941
G MLLT3 MLLT3 super elongation complex subunit JBrowse link 9 20,799,010 21,073,150 RGD:9068941
G MSX1 msh homeobox 1 JBrowse link 4 4,935,603 4,939,117 RGD:9068941
G MSX2 msh homeobox 2 JBrowse link 5 176,968,315 176,974,679 RGD:9068941
G NEUROD1 neuronal differentiation 1 JBrowse link 2B 186,749,155 186,753,541 RGD:9068941
G NR2F2 nuclear receptor subfamily 2 group F member 2 JBrowse link 15 94,196,494 94,210,599 RGD:9068941
G OTX1 orthodenticle homeobox 1 JBrowse link 2A 64,255,217 64,262,221 RGD:9068941
G PBX1 PBX homeobox 1 JBrowse link 1 143,778,426 144,104,493 RGD:9068941
G PCGF2 polycomb group ring finger 2 JBrowse link 17 18,800,426 18,814,838 RGD:9068941
G PCSK5 proprotein convertase subtilisin/kexin type 5 JBrowse link 9 74,745,187 75,224,347 RGD:9068941
G RARG retinoic acid receptor gamma JBrowse link 12 36,303,328 36,325,111 RGD:9068941
G RING1 ring finger protein 1 JBrowse link 6 33,895,631 33,899,734 RGD:9068941
G SCMH1 Scm polycomb group protein homolog 1 JBrowse link 1 41,639,127 41,809,094 RGD:9068941
G SMAD2 SMAD family member 2 JBrowse link 18 44,572,213 44,669,008 RGD:9068941
G SMO smoothened, frizzled class receptor JBrowse link 7 133,668,523 133,693,048 RGD:9068941
G TBX1 T-box 1 JBrowse link 22 18,192,954 18,213,786 RGD:9068941
G TDGF1 teratocarcinoma-derived growth factor 1 JBrowse link 3 47,577,949 47,583,126 RGD:9068941
G TGFBR1 transforming growth factor beta receptor 1 JBrowse link 9 98,337,417 98,362,748 RGD:9068941
G TSHZ1 teashirt zinc finger homeobox 1 JBrowse link 18 71,873,600 71,951,654 RGD:9068941
G TULP3 TUB like protein 3 JBrowse link 12 2,944,769 2,993,287 RGD:9068941
G VANGL2 VANGL planar cell polarity protein 2 JBrowse link 1 139,676,595 139,704,281 RGD:9068941
G YY1 YY1 transcription factor JBrowse link 14 100,173,287 100,217,651 RGD:9068941
G ZBTB16 zinc finger and BTB domain containing 16 JBrowse link 11 112,780,446 112,977,164 RGD:9068941
G ZIC3 Zic family member 3 JBrowse link X 136,954,024 136,968,240 RGD:9068941
axis elongation involved in somitogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LRP6 LDL receptor related protein 6 JBrowse link 12 12,508,108 12,658,074 RGD:9068941
G MED12 mediator complex subunit 12 JBrowse link X 70,443,467 70,467,178 RGD:9068941
G WNT3A Wnt family member 3A JBrowse link 1 208,628,706 208,674,469 RGD:9068941
axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G WNT6 Wnt family member 6 JBrowse link 2B 224,714,217 224,728,557 RGD:9068941
BMP signaling pathway involved in heart induction term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BMP2 bone morphogenetic protein 2 JBrowse link 20 6,546,173 6,558,627 RGD:9068941
G BMP4 bone morphogenetic protein 4 JBrowse link 14 52,821,872 52,828,781 RGD:9068941
G POU5F1 POU class 5 homeobox 1 JBrowse link 6 31,775,343 31,781,426 RGD:9068941
BMP signaling pathway involved in renal system segmentation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BMP4 bone morphogenetic protein 4 JBrowse link 14 52,821,872 52,828,781 RGD:9068941
BMP signaling pathway involved in spinal cord dorsal/ventral patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CHRD chordin JBrowse link 3 189,899,342 189,908,573 RGD:9068941
brain segmentation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G EGR2 early growth response 2 JBrowse link 10 61,648,364 61,652,846 RGD:9068941
G HOXA2 homeobox A2 JBrowse link 7 27,344,100 27,346,794 RGD:9068941
G MAFB MAF bZIP transcription factor B JBrowse link 20 38,125,705 38,128,724 RGD:9068941
cerebral cortex regionalization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ADGRG1 adhesion G protein-coupled receptor G1 JBrowse link 16 57,027,946 57,074,221 RGD:9068941
G DMRTA2 DMRT like family A2 JBrowse link 1 51,166,161 51,170,399 RGD:9068941
G EMX1 empty spiracles homeobox 1 JBrowse link 2A 74,462,012 74,482,159 RGD:9068941
G EMX2 empty spiracles homeobox 2 JBrowse link 10 117,551,451 117,557,972 RGD:9068941
G EOMES eomesodermin JBrowse link 3 27,923,970 27,930,687 RGD:9068941
G PAX6 paired box 6 JBrowse link 11 31,641,813 31,671,071 RGD:9068941
G TRA2B transformer 2 beta homolog JBrowse link 3 191,414,777 191,436,103 RGD:9068941
compartment pattern specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DLL1 delta like canonical Notch ligand 1 JBrowse link 6 173,535,941 173,545,362 RGD:9068941
G DLL3 delta like canonical Notch ligand 3 JBrowse link 19 45,144,641 45,154,854 RGD:9068941
G LFNG LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase JBrowse link 7 2,876,721 2,884,926 RGD:9068941
G NOTCH1 notch receptor 1 JBrowse link 9 136,544,639 136,595,511 RGD:9068941
convergent extension involved in somitogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SFRP1 secreted frizzled related protein 1 JBrowse link 8 37,956,423 38,001,865 RGD:9068941
detection of nodal flow term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PKD1L1 polycystin 1 like 1, transient receptor potential channel interacting JBrowse link 7 48,527,430 48,705,584 RGD:9068941
G PKD2 polycystin 2, transient receptor potential cation channel JBrowse link 4 91,019,739 91,088,858 RGD:9068941
determination of bilateral symmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 JBrowse link 15 55,237,101 55,349,851 RGD:9068941
determination of digestive tract left/right asymmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CCDC103 coiled-coil domain containing 103 JBrowse link 17 12,591,698 12,595,664 RGD:9068941
G CCDC39 coiled-coil domain containing 39 JBrowse link 3 185,811,581 185,878,362 RGD:9068941
G CCDC40 coiled-coil domain containing 40 JBrowse link 17 79,656,287 79,722,565 RGD:9068941
G DNAAF1 dynein axonemal assembly factor 1 JBrowse link 16 84,153,949 84,184,991 RGD:9068941
G MEGF8 multiple EGF like domains 8 JBrowse link 19 47,805,307 47,858,636 RGD:9068941
G ZIC3 Zic family member 3 JBrowse link X 136,954,024 136,968,240 RGD:9068941
determination of dorsal identity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CER1 cerberus 1, DAN family BMP antagonist JBrowse link 9 15,063,766 15,066,776 RGD:9068941
G GREM1 gremlin 1, DAN family BMP antagonist JBrowse link 15 30,051,483 30,068,243 RGD:9068941
G GREM2 gremlin 2, DAN family BMP antagonist JBrowse link 1 221,023,212 221,148,149 RGD:9068941
G NBL1 NBL1, DAN family BMP antagonist JBrowse link 1 19,652,853 19,656,431 RGD:9068941
G WNT8B Wnt family member 8B JBrowse link 10 100,550,158 100,565,369 RGD:9068941
determination of heart left/right asymmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CER1 cerberus 1, DAN family BMP antagonist JBrowse link 9 15,063,766 15,066,776 RGD:9068941
G DAND5 DAN domain BMP antagonist family member 5 JBrowse link 15 63,609,625 63,614,158 RGD:9068941
G DNAH11 dynein axonemal heavy chain 11 JBrowse link 7 21,540,932 21,897,485 RGD:9068941
G MEGF8 multiple EGF like domains 8 JBrowse link 19 47,805,307 47,858,636 RGD:9068941
G MMP21 matrix metallopeptidase 21 JBrowse link 10 126,591,824 126,601,173 RGD:9068941
G TBXT T-box transcription factor T JBrowse link 6 169,095,723 169,106,595 RGD:9068941
determination of intestine left/right asymmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NPHP3 nephrocystin 3 JBrowse link 3 137,229,994 137,271,458 RGD:9068941
determination of left/right asymmetry in lateral mesoderm term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DAND5 DAN domain BMP antagonist family member 5 JBrowse link 15 63,609,625 63,614,158 RGD:9068941
G SHH sonic hedgehog signaling molecule JBrowse link 7 159,116,966 159,126,660 RGD:9068941
G SMO smoothened, frizzled class receptor JBrowse link 7 133,668,523 133,693,048 RGD:9068941
determination of left/right asymmetry in nervous system term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DNAH11 dynein axonemal heavy chain 11 JBrowse link 7 21,540,932 21,897,485 RGD:9068941
G ZIC3 Zic family member 3 JBrowse link X 136,954,024 136,968,240 RGD:9068941
determination of left/right symmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACVR1 activin A receptor type 1 JBrowse link 2B 162,234,823 162,372,533 RGD:9068941
G ACVR2A activin A receptor type 2A JBrowse link 2B 152,253,843 152,288,385 RGD:9068941
G ACVR2B activin A receptor type 2B JBrowse link 3 38,633,097 38,671,843 RGD:9068941
G ALG5 ALG5 dolichyl-phosphate beta-glucosyltransferase JBrowse link 13 36,587,531 36,638,107 RGD:9068941
G AP1B1 adaptor related protein complex 1 subunit beta 1 JBrowse link 22 28,189,831 28,291,808 RGD:9068941
G ARL6 ADP ribosylation factor like GTPase 6 JBrowse link 3 101,519,718 101,556,419 RGD:9068941
G ARMC4 armadillo repeat containing 4 JBrowse link 10 28,304,279 28,490,897 RGD:9068941
G BBS7 Bardet-Biedl syndrome 7 JBrowse link 4 125,161,804 125,208,350 RGD:9068941
G BICC1 BicC family RNA binding protein 1 JBrowse link 10 57,539,710 57,568,882 RGD:9068941
G C9H9orf116 chromosome 9 C9orf116 homolog JBrowse link 9 135,628,471 135,633,837 RGD:9068941
G CC2D2A coiled-coil and C2 domain containing 2A JBrowse link 4 15,204,326 15,345,522 RGD:9068941
G CCDC151 coiled-coil domain containing 151 JBrowse link 19 11,678,306 11,694,190 RGD:9068941
G CCDC39 coiled-coil domain containing 39 JBrowse link 3 185,811,581 185,878,362 RGD:9068941
G CFAP53 cilia and flagella associated protein 53 JBrowse link 18 46,955,364 46,994,771 RGD:9068941
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 JBrowse link 6 141,213,671 141,215,919 RGD:9068941
G DAAM2 dishevelled associated activator of morphogenesis 2 JBrowse link 6 40,685,198 40,799,395 RGD:9068941
G DISP1 dispatched RND transporter family member 1 JBrowse link 1 203,501,711 203,692,218 RGD:9068941
G DLL1 delta like canonical Notch ligand 1 JBrowse link 6 173,535,941 173,545,362 RGD:9068941
G DNAAF4 dynein axonemal assembly factor 4 JBrowse link 15 52,711,349 52,800,598 RGD:9068941
G DNAH11 dynein axonemal heavy chain 11 JBrowse link 7 21,540,932 21,897,485 RGD:9068941
G DNAH5 dynein axonemal heavy chain 5 JBrowse link 5 13,833,309 14,159,871 RGD:9068941
G DNAI1 dynein axonemal intermediate chain 1 JBrowse link 9 35,104,297 35,167,454 RGD:9068941
G DNAI2 dynein axonemal intermediate chain 2 JBrowse link 17 73,770,753 73,811,845 RGD:9068941
G DPCD deleted in primary ciliary dyskinesia homolog (mouse) JBrowse link 10 101,663,384 101,684,812 RGD:9068941
G DRC1 dynein regulatory complex subunit 1 JBrowse link 2A 26,491,900 26,545,640 RGD:9068941
G DYNC2H1 dynein cytoplasmic 2 heavy chain 1 JBrowse link 11 101,536,471 101,909,194 RGD:9068941
G DYNC2LI1 dynein cytoplasmic 2 light intermediate chain 1 JBrowse link 2A 44,706,777 44,760,757 RGD:9068941
G FGF10 fibroblast growth factor 10 JBrowse link 5 71,028,324 71,111,713 RGD:9068941
G FOXF1 forkhead box F1 JBrowse link 16 86,515,150 86,519,949 RGD:9068941
G FOXJ1 forkhead box J1 JBrowse link 17 75,637,615 75,642,571 RGD:9068941
G GALNT11 polypeptide N-acetylgalactosaminyltransferase 11 JBrowse link 7 155,784,191 155,848,176 RGD:9068941
G GAS8 growth arrest specific 8 JBrowse link 16 90,441,096 90,469,533 RGD:9068941
G IFT140 intraflagellar transport 140 JBrowse link 16 1,566,309 1,662,833 RGD:9068941
G IFT74 intraflagellar transport 74 JBrowse link 9 27,409,962 27,514,756 RGD:9068941
G KIF3B kinesin family member 3B JBrowse link 20 29,727,021 29,750,223 RGD:9068941
G MKKS McKusick-Kaufman syndrome JBrowse link 20 10,351,246 10,380,503 RGD:9068941
G MKS1 MKS transition zone complex subunit 1 JBrowse link 17 57,137,254 57,151,122 RGD:9068941
G MMP21 matrix metallopeptidase 21 JBrowse link 10 126,591,824 126,601,173 RGD:9068941
G NEK8 NIMA related kinase 8 JBrowse link 17 28,539,621 28,553,282 RGD:9068941
G NKX3-2 NK3 homeobox 2 JBrowse link 4 13,258,949 13,262,458 RGD:9068941
G NOTCH1 notch receptor 1 JBrowse link 9 136,544,639 136,595,511 RGD:9068941
G NPHP3 nephrocystin 3 JBrowse link 3 137,229,994 137,271,458 RGD:9068941
G PCSK5 proprotein convertase subtilisin/kexin type 5 JBrowse link 9 74,745,187 75,224,347 RGD:9068941
G PCSK6 proprotein convertase subtilisin/kexin type 6 JBrowse link 15 99,312,512 99,456,295 RGD:9068941
G PITX2 paired like homeodomain 2 JBrowse link 4 113,676,846 113,696,518 RGD:9068941
G PKD2 polycystin 2, transient receptor potential cation channel JBrowse link 4 91,019,739 91,088,858 RGD:9068941
G PSKH1 protein serine kinase H1 JBrowse link 16 67,637,855 67,658,256 RGD:9068941
G RIPPLY2 ripply transcriptional repressor 2 JBrowse link 6 85,022,737 85,027,930 RGD:9068941
G RPGRIP1L RPGRIP1 like JBrowse link 16 52,920,790 53,023,178 RGD:9068941
G RTTN rotatin JBrowse link 18 66,674,250 66,874,390 RGD:9068941
G STIL STIL centriolar assembly protein JBrowse link 1 48,072,728 48,137,071 RGD:9068941
G TBC1D32 TBC1 domain family member 32 JBrowse link 6 123,021,640 123,274,114 RGD:9068941
G TBX1 T-box 1 JBrowse link 22 18,192,954 18,213,786 RGD:9068941
G TDGF1 teratocarcinoma-derived growth factor 1 JBrowse link 3 47,577,949 47,583,126 RGD:9068941
G ZIC3 Zic family member 3 JBrowse link X 136,954,024 136,968,240 RGD:9068941
determination of liver left/right asymmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CCDC39 coiled-coil domain containing 39 JBrowse link 3 185,811,581 185,878,362 RGD:9068941
G CCDC40 coiled-coil domain containing 40 JBrowse link 17 79,656,287 79,722,565 RGD:9068941
G DNAAF1 dynein axonemal assembly factor 1 JBrowse link 16 84,153,949 84,184,991 RGD:9068941
G NPHP3 nephrocystin 3 JBrowse link 3 137,229,994 137,271,458 RGD:9068941
G PKD2 polycystin 2, transient receptor potential cation channel JBrowse link 4 91,019,739 91,088,858 RGD:9068941
G ZIC3 Zic family member 3 JBrowse link X 136,954,024 136,968,240 RGD:9068941
determination of pancreatic left/right asymmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CCDC39 coiled-coil domain containing 39 JBrowse link 3 185,811,581 185,878,362 RGD:9068941
G CCDC40 coiled-coil domain containing 40 JBrowse link 17 79,656,287 79,722,565 RGD:9068941
G DNAAF1 dynein axonemal assembly factor 1 JBrowse link 16 84,153,949 84,184,991 RGD:9068941
G NPHP3 nephrocystin 3 JBrowse link 3 137,229,994 137,271,458 RGD:9068941
G ZIC3 Zic family member 3 JBrowse link X 136,954,024 136,968,240 RGD:9068941
determination of stomach left/right asymmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NPHP3 nephrocystin 3 JBrowse link 3 137,229,994 137,271,458 RGD:9068941
determination of ventral identity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AIDA axin interactor, dorsalization associated JBrowse link 1 203,354,925 203,399,193 RGD:9068941
dorsal/ventral axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BMPR1A bone morphogenetic protein receptor type 1A JBrowse link 10 86,742,248 86,912,912 RGD:9068941
G CTNNB1 catenin beta 1 JBrowse link 3 41,372,368 41,414,030 RGD:9068941
G MDFI MyoD family inhibitor JBrowse link 6 42,527,805 42,545,030 RGD:9068941
G PAX6 paired box 6 JBrowse link 11 31,641,813 31,671,071 RGD:9068941
G SENP2 SUMO specific peptidase 2 JBrowse link 3 191,083,159 191,129,572 RGD:9068941
G SFRP1 secreted frizzled related protein 1 JBrowse link 8 37,956,423 38,001,865 RGD:9068941
G VAX2 ventral anterior homeobox 2 JBrowse link 2A 72,078,829 72,111,463 RGD:9068941
G WNT3 Wnt family member 3 JBrowse link 17 10,862,310 10,918,865 RGD:9068941
dorsal/ventral neural tube patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BMP4 bone morphogenetic protein 4 JBrowse link 14 52,821,872 52,828,781 RGD:9068941
G FKBP8 FKBP prolyl isomerase 8 JBrowse link 19 18,980,269 18,992,170 RGD:9068941
G FOXA1 forkhead box A1 JBrowse link 14 36,708,885 36,711,599 RGD:9068941
G GSC goosecoid homeobox JBrowse link 14 94,718,269 94,720,200 RGD:9068941
G KIF3A kinesin family member 3A JBrowse link 5 134,268,505 134,315,431 RGD:9068941
G PAX7 paired box 7 JBrowse link 1 18,639,641 18,756,952 RGD:9068941
G PSEN1 presenilin 1 JBrowse link 14 72,579,024 72,663,876 RGD:9068941
G SHH sonic hedgehog signaling molecule JBrowse link 7 159,116,966 159,126,660 RGD:9068941
G SMO smoothened, frizzled class receptor JBrowse link 7 133,668,523 133,693,048 RGD:9068941
G TCTN1 tectonic family member 1 JBrowse link 12 111,577,599 111,625,933 RGD:9068941
G WNT3A Wnt family member 3A JBrowse link 1 208,628,706 208,674,469 RGD:9068941
dorsal/ventral pattern formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AIDA axin interactor, dorsalization associated JBrowse link 1 203,354,925 203,399,193 RGD:9068941
G ARL13B ADP ribosylation factor like GTPase 13B JBrowse link 3 97,725,136 97,799,932 RGD:9068941
G BMPR1B bone morphogenetic protein receptor type 1B JBrowse link 4 97,912,541 98,194,890 RGD:9068941
G DISP1 dispatched RND transporter family member 1 JBrowse link 1 203,501,711 203,692,218 RGD:9068941
G DSCAML1 DS cell adhesion molecule like 1 JBrowse link 11 116,196,121 116,564,715 RGD:9068941
G DYNC2H1 dynein cytoplasmic 2 heavy chain 1 JBrowse link 11 101,536,471 101,909,194 RGD:9068941
G EDN1 endothelin 1 JBrowse link 6 12,405,538 12,503,545 RGD:9068941
G FBXL15 F-box and leucine rich repeat protein 15 JBrowse link 10 102,488,353 102,492,301 RGD:9068941
G FOXG1 forkhead box G1 JBrowse link 14 27,697,244 27,699,869 RGD:9068941
G GLI1 GLI family zinc finger 1 JBrowse link 12 31,710,051 31,722,473 RGD:9068941
G GLI3 GLI family zinc finger 3 JBrowse link 7 42,056,566 42,322,865 RGD:9068941
G HHIP hedgehog interacting protein JBrowse link 4 148,651,597 148,743,933 RGD:9068941
G HOXA11 homeobox A11 JBrowse link 7 27,426,602 27,429,092 RGD:9068941
G HOXA2 homeobox A2 JBrowse link 7 27,344,100 27,346,794 RGD:9068941
G HOXB2 homeobox B2 JBrowse link 17 9,176,313 9,178,713 RGD:9068941
G HOXD11 homeobox D11 JBrowse link 2B 181,095,347 181,098,680 RGD:9068941
G IFT172 intraflagellar transport 172 JBrowse link 2A 27,536,534 27,580,406 RGD:9068941
G IFT52 intraflagellar transport 52 JBrowse link 20 41,023,517 41,080,500 RGD:9068941
G LHX1 LIM homeobox 1 JBrowse link 17 20,430,618 20,437,751 RGD:9068941
G LHX2 LIM homeobox 2 JBrowse link 9 123,655,845 123,676,803 RGD:9068941
G LMX1B LIM homeobox transcription factor 1 beta JBrowse link 9 126,240,722 126,322,716 RGD:9068941
G LRP4 LDL receptor related protein 4 JBrowse link 11 47,364,195 47,409,143 RGD:9068941
G NOG noggin JBrowse link 17 55,532,208 55,533,782 RGD:9068941
G NOTO notochord homeobox JBrowse link 2A 74,744,181 74,752,950 RGD:9068941
G OVOL2 ovo like zinc finger 2 JBrowse link 20 17,961,749 17,996,364 RGD:9068941
G PTCH1 patched 1 JBrowse link 9 94,668,792 94,741,517 RGD:9068941
G SHH sonic hedgehog signaling molecule JBrowse link 7 159,116,966 159,126,660 RGD:9068941
G SP8 Sp8 transcription factor JBrowse link 7 20,772,300 20,778,071 RGD:9068941
G TBX20 T-box 20 JBrowse link 7 36,089,552 36,114,447 RGD:9068941
G WNT7A Wnt family member 7A JBrowse link 3 14,075,359 14,138,386 RGD:9068941
embryonic axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CITED1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 JBrowse link X 71,621,785 71,627,300 RGD:9068941
G COBL cordon-bleu WH2 repeat protein JBrowse link 7 51,894,468 52,114,849 RGD:9068941
G CTNNB1 catenin beta 1 JBrowse link 3 41,372,368 41,414,030 RGD:9068941
G FZD5 frizzled class receptor 5 JBrowse link 2B 213,128,615 213,135,569 RGD:9068941
G STIL STIL centriolar assembly protein JBrowse link 1 48,072,728 48,137,071 RGD:9068941
G WNT1 Wnt family member 1 JBrowse link 12 40,648,413 40,652,583 RGD:9068941
G WNT7A Wnt family member 7A JBrowse link 3 14,075,359 14,138,386 RGD:9068941
embryonic heart tube anterior/posterior pattern specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BMP2 bone morphogenetic protein 2 JBrowse link 20 6,546,173 6,558,627 RGD:9068941
G FOXH1 forkhead box H1 JBrowse link 8 144,229,228 144,231,829 RGD:9068941
G GATA4 GATA binding protein 4 RGD:9068941
embryonic heart tube left/right pattern formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 JBrowse link 6 141,213,671 141,215,919 RGD:9068941
G IFT122 intraflagellar transport 122 JBrowse link 3 133,851,433 133,930,117 RGD:9068941
G MEGF8 multiple EGF like domains 8 JBrowse link 19 47,805,307 47,858,636 RGD:9068941
G NKX2-5 NK2 homeobox 5 JBrowse link 5 175,492,288 175,495,514 RGD:9068941
embryonic pattern specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BMP7 bone morphogenetic protein 7 JBrowse link 20 54,788,974 54,885,015 RGD:9068941
G DISP1 dispatched RND transporter family member 1 JBrowse link 1 203,501,711 203,692,218 RGD:9068941
G EFNB1 ephrin B1 JBrowse link X 68,139,078 68,152,127 RGD:9068941
G ERBB4 erb-b2 receptor tyrosine kinase 4 JBrowse link 2B 217,107,266 218,272,621 RGD:9068941
G FGF10 fibroblast growth factor 10 JBrowse link 5 71,028,324 71,111,713 RGD:9068941
G FGFR2 fibroblast growth factor receptor 2 JBrowse link 10 121,469,735 121,588,815 RGD:9068941
G IHH Indian hedgehog signaling molecule JBrowse link 2B 224,905,488 224,917,887 RGD:9068941
G LHX1 LIM homeobox 1 JBrowse link 17 20,430,618 20,437,751 RGD:9068941
G LRP6 LDL receptor related protein 6 JBrowse link 12 12,508,108 12,658,074 RGD:9068941
G NODAL nodal growth differentiation factor JBrowse link 10 69,433,959 69,443,972 RGD:9068941
G NOTO notochord homeobox JBrowse link 2A 74,744,181 74,752,950 RGD:9068941
G PGAP1 post-GPI attachment to proteins 1 JBrowse link 2B 201,975,318 202,063,853 RGD:9068941
G RIPPLY1 ripply transcriptional repressor 1 JBrowse link X 106,377,932 106,381,193 RGD:9068941
G RIPPLY2 ripply transcriptional repressor 2 JBrowse link 6 85,022,737 85,027,930 RGD:9068941
G RIPPLY3 ripply transcriptional repressor 3 JBrowse link 21 36,723,931 36,734,886 RGD:9068941
G SATB2 SATB homeobox 2 JBrowse link 2B 204,408,681 204,603,286 RGD:9068941
G SHH sonic hedgehog signaling molecule JBrowse link 7 159,116,966 159,126,660 RGD:9068941
G SIM2 SIM bHLH transcription factor 2 JBrowse link 21 36,415,945 36,462,339 RGD:9068941
G SMAD1 SMAD family member 1 JBrowse link 4 149,481,819 149,558,135 RGD:9068941
G SMAD3 SMAD family member 3 JBrowse link 15 64,284,949 64,414,185 RGD:9068941
G SMAD5 SMAD family member 5 JBrowse link 5 137,663,558 137,713,130 RGD:9068941
G ZBTB16 zinc finger and BTB domain containing 16 JBrowse link 11 112,780,446 112,977,164 RGD:9068941
epiblast cell-extraembryonic ectoderm cell signaling involved in anterior/posterior axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NODAL nodal growth differentiation factor JBrowse link 10 69,433,959 69,443,972 RGD:9068941
epithelial cilium movement involved in determination of left/right asymmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CCDC103 coiled-coil domain containing 103 JBrowse link 17 12,591,698 12,595,664 RGD:9068941
G CCDC39 coiled-coil domain containing 39 JBrowse link 3 185,811,581 185,878,362 RGD:9068941
G CCDC40 coiled-coil domain containing 40 JBrowse link 17 79,656,287 79,722,565 RGD:9068941
G CFAP53 cilia and flagella associated protein 53 JBrowse link 18 46,955,364 46,994,771 RGD:9068941
G DNAAF1 dynein axonemal assembly factor 1 JBrowse link 16 84,153,949 84,184,991 RGD:9068941
G DNAH11 dynein axonemal heavy chain 11 JBrowse link 7 21,540,932 21,897,485 RGD:9068941
G LRRC6 leucine rich repeat containing 6 JBrowse link 8 132,199,607 132,305,351 RGD:9068941
G NPHP3 nephrocystin 3 JBrowse link 3 137,229,994 137,271,458 RGD:9068941
G OFD1 OFD1 centriole and centriolar satellite protein JBrowse link X 13,630,006 13,669,285 RGD:9068941
G RFX3 regulatory factor X3 JBrowse link 9 3,216,667 3,523,179 RGD:9068941
establishment of anatomical structure orientation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TTC8 tetratricopeptide repeat domain 8 JBrowse link 14 88,802,812 88,857,055 RGD:9068941
establishment of animal organ orientation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G IRX4 iroquois homeobox 4 JBrowse link 5 1,930,054 1,939,766 RGD:9068941
G WNT8A Wnt family member 8A JBrowse link 5 139,598,229 139,605,926 RGD:9068941
fibroblast growth factor receptor signaling pathway involved in mammary gland specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FGF10 fibroblast growth factor 10 JBrowse link 5 71,028,324 71,111,713 RGD:9068941
G FGFR2 fibroblast growth factor receptor 2 JBrowse link 10 121,469,735 121,588,815 RGD:9068941
fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NOG noggin JBrowse link 17 55,532,208 55,533,782 RGD:9068941
forebrain anterior/posterior pattern specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FEZF1 FEZ family zinc finger 1 JBrowse link 7 126,995,708 127,005,733 RGD:9068941
G FEZF2 FEZ family zinc finger 2 JBrowse link 3 63,679,898 63,683,700 RGD:9068941
G SIX3 SIX homeobox 3 JBrowse link 2A 45,978,828 45,988,078 RGD:9068941
G WNT1 Wnt family member 1 JBrowse link 12 40,648,413 40,652,583 RGD:9068941
forebrain dorsal/ventral pattern formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FGF8 fibroblast growth factor 8 JBrowse link 10 101,844,792 101,849,873 RGD:9068941
G GLI3 GLI family zinc finger 3 JBrowse link 7 42,056,566 42,322,865 RGD:9068941
G GSX2 GS homeobox 2 JBrowse link 4 76,397,771 76,399,715 RGD:9068941
G NKX2-1 NK2 homeobox 1 JBrowse link 14 35,627,911 35,633,377 RGD:9068941
G PAX6 paired box 6 JBrowse link 11 31,641,813 31,671,071 RGD:9068941
G SIX3 SIX homeobox 3 JBrowse link 2A 45,978,828 45,988,078 RGD:9068941
G TTC21B tetratricopeptide repeat domain 21B JBrowse link 2B 170,618,800 170,698,903 RGD:9068941
forebrain regionalization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LHX1 LIM homeobox 1 JBrowse link 17 20,430,618 20,437,751 RGD:9068941
G PGAP1 post-GPI attachment to proteins 1 JBrowse link 2B 201,975,318 202,063,853 RGD:9068941
G WNT2B Wnt family member 2B JBrowse link 1 125,173,906 125,230,675 RGD:9068941
G WNT7B Wnt family member 7B JBrowse link 22 44,988,647 45,039,601 RGD:9068941
forebrain-midbrain boundary formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PAX6 paired box 6 JBrowse link 11 31,641,813 31,671,071 RGD:9068941
growth plate cartilage axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G STC1 stanniocalcin 1 JBrowse link 8 20,023,469 20,036,321 RGD:9068941
heart looping term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AHI1 Abelson helper integration site 1 JBrowse link 6 137,149,457 137,366,731 RGD:9068941
G ARL13B ADP ribosylation factor like GTPase 13B JBrowse link 3 97,725,136 97,799,932 RGD:9068941
G BBS4 Bardet-Biedl syndrome 4 JBrowse link 15 70,362,007 70,416,964 RGD:9068941
G BBS5 Bardet-Biedl syndrome 5 JBrowse link 2B 174,220,825 174,245,820 RGD:9068941
G BBS7 Bardet-Biedl syndrome 7 JBrowse link 4 125,161,804 125,208,350 RGD:9068941
G C2CD3 C2 calcium dependent domain containing 3 JBrowse link 11 72,392,606 72,551,620 RGD:9068941
G CCDC103 coiled-coil domain containing 103 JBrowse link 17 12,591,698 12,595,664 RGD:9068941
G CCDC39 coiled-coil domain containing 39 JBrowse link 3 185,811,581 185,878,362 RGD:9068941
G CCDC40 coiled-coil domain containing 40 JBrowse link 17 79,656,287 79,722,565 RGD:9068941
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 JBrowse link 6 141,213,671 141,215,919 RGD:9068941
G DLL1 delta like canonical Notch ligand 1 JBrowse link 6 173,535,941 173,545,362 RGD:9068941
G DNAAF1 dynein axonemal assembly factor 1 JBrowse link 16 84,153,949 84,184,991 RGD:9068941
G ENG endoglin JBrowse link 9 127,605,608 127,644,641 RGD:9068941
G FGF8 fibroblast growth factor 8 JBrowse link 10 101,844,792 101,849,873 RGD:9068941
G FOLR1 folate receptor 1 JBrowse link 11 70,492,039 70,498,665 RGD:9068941
G FOXH1 forkhead box H1 JBrowse link 8 144,229,228 144,231,829 RGD:9068941
G FOXN4 forkhead box N4 JBrowse link 12 110,250,547 110,280,876 RGD:9068941
G GATA4 GATA binding protein 4 RGD:9068941
G GJA1 gap junction protein alpha 1 JBrowse link 6 123,348,744 123,360,887 RGD:9068941
G HAND1 heart and neural crest derivatives expressed 1 JBrowse link 5 155,875,100 155,878,374 RGD:9068941
G HAND2 heart and neural crest derivatives expressed 2 JBrowse link 4 177,990,362 177,992,861 RGD:9068941
G HIF1A hypoxia inducible factor 1 subunit alpha JBrowse link 14 60,552,374 60,604,885 RGD:9068941
G IFT172 intraflagellar transport 172 JBrowse link 2A 27,536,534 27,580,406 RGD:9068941
G IFT52 intraflagellar transport 52 JBrowse link 20 41,023,517 41,080,500 RGD:9068941
G IFT57 intraflagellar transport 57 JBrowse link 3 112,220,461 112,282,317 RGD:9068941
G IHH Indian hedgehog signaling molecule JBrowse link 2B 224,905,488 224,917,887 RGD:9068941
G KIF3A kinesin family member 3A JBrowse link 5 134,268,505 134,315,431 RGD:9068941
G MEF2C myocyte enhancer factor 2C JBrowse link 5 26,620,837 26,786,426 RGD:9068941
G MESP1 mesoderm posterior bHLH transcription factor 1 JBrowse link 15 87,645,768 87,647,210 RGD:9068941
G MIB1 mindbomb E3 ubiquitin protein ligase 1 JBrowse link 18 18,579,023 18,746,335 RGD:9068941
G MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 JBrowse link 11 11,970,982 12,123,855 RGD:9068941
G MKKS McKusick-Kaufman syndrome JBrowse link 20 10,351,246 10,380,503 RGD:9068941
G NDRG4 NDRG family member 4 JBrowse link 16 57,857,414 57,907,557 RGD:9068941
G NKX2-5 NK2 homeobox 5 JBrowse link 5 175,492,288 175,495,514 RGD:9068941
G NODAL nodal growth differentiation factor JBrowse link 10 69,433,959 69,443,972 RGD:9068941
G NOTCH1 notch receptor 1 JBrowse link 9 136,544,639 136,595,511 RGD:9068941
G NOTO notochord homeobox JBrowse link 2A 74,744,181 74,752,950 RGD:9068941
G NPHP3 nephrocystin 3 JBrowse link 3 137,229,994 137,271,458 RGD:9068941
G OVOL2 ovo like zinc finger 2 JBrowse link 20 17,961,749 17,996,364 RGD:9068941
G PKD2 polycystin 2, transient receptor potential cation channel JBrowse link 4 91,019,739 91,088,858 RGD:9068941
G PSEN1 presenilin 1 JBrowse link 14 72,579,024 72,663,876 RGD:9068941
G SETDB2 SET domain bifurcated histone lysine methyltransferase 2 JBrowse link 13 49,335,801 49,386,150 RGD:9068941
G SHH sonic hedgehog signaling molecule JBrowse link 7 159,116,966 159,126,660 RGD:9068941
G SMAD3 SMAD family member 3 JBrowse link 15 64,284,949 64,414,185 RGD:9068941
G SMO smoothened, frizzled class receptor JBrowse link 7 133,668,523 133,693,048 RGD:9068941
G SOX17 SRY-box 17 JBrowse link 8 48,257,287 48,259,808 RGD:9068941
G SRF serum response factor JBrowse link 6 44,057,192 44,066,768 RGD:9068941
G STIL STIL centriolar assembly protein JBrowse link 1 48,072,728 48,137,071 RGD:9068941
G SUFU SUFU negative regulator of hedgehog signaling JBrowse link 10 102,571,886 102,696,472 RGD:9068941
G TBX2 T-box 2 JBrowse link 17 60,617,169 60,631,148 RGD:9068941
G TBX20 T-box 20 JBrowse link 7 36,089,552 36,114,447 RGD:9068941
G TBX3 T-box 3 JBrowse link 12 115,618,420 115,632,327 RGD:9068941
G TGFBR2 transforming growth factor beta receptor 2 JBrowse link 3 30,854,071 30,941,378 RGD:9068941
G TMED2 transmembrane p24 trafficking protein 2 JBrowse link 12 125,397,391 125,410,799 RGD:9068941
G VANGL2 VANGL planar cell polarity protein 2 JBrowse link 1 139,676,595 139,704,281 RGD:9068941
G WNT3A Wnt family member 3A JBrowse link 1 208,628,706 208,674,469 RGD:9068941
G WNT5A Wnt family member 5A JBrowse link 3 56,617,006 56,639,367 RGD:9068941
G ZIC3 Zic family member 3 JBrowse link X 136,954,024 136,968,240 RGD:9068941
left/right axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AHI1 Abelson helper integration site 1 JBrowse link 6 137,149,457 137,366,731 RGD:9068941
G ARL13B ADP ribosylation factor like GTPase 13B JBrowse link 3 97,725,136 97,799,932 RGD:9068941
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 JBrowse link 6 141,213,671 141,215,919 RGD:9068941
G DLL1 delta like canonical Notch ligand 1 JBrowse link 6 173,535,941 173,545,362 RGD:9068941
G EPB41L5 erythrocyte membrane protein band 4.1 like 5 JBrowse link 2B 120,521,139 120,687,209 RGD:9068941
G HSPB11 heat shock protein family B (small) member 11 JBrowse link 1 54,790,168 54,814,281 RGD:9068941
G IFT172 intraflagellar transport 172 JBrowse link 2A 27,536,534 27,580,406 RGD:9068941
G MNS1 meiosis specific nuclear structural 1 JBrowse link 15 53,713,815 53,750,213 RGD:9068941
G NOTCH1 notch receptor 1 JBrowse link 9 136,544,639 136,595,511 RGD:9068941
G PITX2 paired like homeodomain 2 JBrowse link 4 113,676,846 113,696,518 RGD:9068941
G PKD1L1 polycystin 1 like 1, transient receptor potential channel interacting JBrowse link 7 48,527,430 48,705,584 RGD:9068941
G SETDB2 SET domain bifurcated histone lysine methyltransferase 2 JBrowse link 13 49,335,801 49,386,150 RGD:9068941
G SMO smoothened, frizzled class receptor JBrowse link 7 133,668,523 133,693,048 RGD:9068941
left/right pattern formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DNAAF1 dynein axonemal assembly factor 1 JBrowse link 16 84,153,949 84,184,991 RGD:9068941
G DPCD deleted in primary ciliary dyskinesia homolog (mouse) JBrowse link 10 101,663,384 101,684,812 RGD:9068941
G FOXJ1 forkhead box J1 JBrowse link 17 75,637,615 75,642,571 RGD:9068941
G IFT57 intraflagellar transport 57 JBrowse link 3 112,220,461 112,282,317 RGD:9068941
G MEGF8 multiple EGF like domains 8 JBrowse link 19 47,805,307 47,858,636 RGD:9068941
G SNAI1 snail family transcriptional repressor 1 JBrowse link 20 47,384,818 47,390,738 RGD:9068941
lung induction term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CTNNB1 catenin beta 1 JBrowse link 3 41,372,368 41,414,030 RGD:9068941
G WNT2 Wnt family member 2 JBrowse link 7 121,939,254 121,985,862 RGD:9068941
G WNT2B Wnt family member 2B JBrowse link 1 125,173,906 125,230,675 RGD:9068941
lung proximal/distal axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FGF10 fibroblast growth factor 10 JBrowse link 5 71,028,324 71,111,713 RGD:9068941
mammary gland specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GLI3 GLI family zinc finger 3 JBrowse link 7 42,056,566 42,322,865 RGD:9068941
midbrain-hindbrain boundary development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FGF8 fibroblast growth factor 8 JBrowse link 10 101,844,792 101,849,873 RGD:9068941
G LRP6 LDL receptor related protein 6 JBrowse link 12 12,508,108 12,658,074 RGD:9068941
midbrain-hindbrain boundary initiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SSBP3 single stranded DNA binding protein 3 JBrowse link 1 55,094,800 55,281,039 RGD:9068941
midbrain-hindbrain boundary maturation during brain development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G WNT1 Wnt family member 1 JBrowse link 12 40,648,413 40,652,583 RGD:9068941
midbrain-hindbrain boundary morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GBX2 gastrulation brain homeobox 2 JBrowse link 2B 242,257,729 242,261,660 RGD:9068941
G HES1 hes family bHLH transcription factor 1 JBrowse link 3 201,749,044 201,751,591 RGD:9068941
G HES3 hes family bHLH transcription factor 3 JBrowse link 1 6,264,032 6,268,002 RGD:9068941
G KDM2B lysine demethylase 2B JBrowse link 12 122,401,296 122,556,980 RGD:9068941
negative regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TBX18 T-box 18 JBrowse link 6 85,906,500 85,938,356 RGD:9068941
negative regulation of determination of dorsal identity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DDIT3 DNA damage inducible transcript 3 JBrowse link 12 31,664,766 31,668,699 RGD:9068941
G SOSTDC1 sclerostin domain containing 1 JBrowse link 7 16,443,703 16,448,076 RGD:9068941
negative regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FUZ fuzzy planar cell polarity protein JBrowse link 19 55,736,325 55,742,589 RGD:9068941
negative regulation of heart induction by canonical Wnt signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G WNT3A Wnt family member 3A JBrowse link 1 208,628,706 208,674,469 RGD:9068941
negative regulation of heart looping term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TBX2 T-box 2 JBrowse link 17 60,617,169 60,631,148 RGD:9068941
negative regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CER1 cerberus 1, DAN family BMP antagonist JBrowse link 9 15,063,766 15,066,776 RGD:9068941
G DAND5 DAN domain BMP antagonist family member 5 JBrowse link 15 63,609,625 63,614,158 RGD:9068941
negative regulation of Notch signaling pathway involved in somitogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LFNG LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase JBrowse link 7 2,876,721 2,884,926 RGD:9068941
G NRARP NOTCH regulated ankyrin repeat protein JBrowse link 9 137,331,244 137,331,666 RGD:9068941
negative regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GPR161 G protein-coupled receptor 161 JBrowse link 1 147,293,355 147,351,510 RGD:9068941
G PRKACA protein kinase cAMP-activated catalytic subunit alpha JBrowse link 19 14,385,183 14,406,205 RGD:9068941
G PRKACB protein kinase cAMP-activated catalytic subunit beta JBrowse link 1 85,574,094 85,647,446 RGD:9068941
G SUFU SUFU negative regulator of hedgehog signaling JBrowse link 10 102,571,886 102,696,472 RGD:9068941
G TRAF3IP1 TRAF3 interacting protein 1 JBrowse link 2B 244,404,777 244,481,785 RGD:9068941
G TULP3 TUB like protein 3 JBrowse link 12 2,944,769 2,993,287 RGD:9068941
negative regulation of smoothened signaling pathway involved in ventral spinal cord patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G IFT122 intraflagellar transport 122 JBrowse link 3 133,851,433 133,930,117 RGD:9068941
G RFX4 regulatory factor X4 JBrowse link 12 107,550,254 107,724,623 RGD:9068941
G TULP3 TUB like protein 3 JBrowse link 12 2,944,769 2,993,287 RGD:9068941
negative regulation of Wnt signaling pathway involved in dorsal/ventral axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SFRP1 secreted frizzled related protein 1 JBrowse link 8 37,956,423 38,001,865 RGD:9068941
neural plate anterior/posterior regionalization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CELSR2 cadherin EGF LAG seven-pass G-type receptor 2 JBrowse link 1 110,791,720 110,817,125 RGD:9068941
neural plate axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G C2CD3 C2 calcium dependent domain containing 3 JBrowse link 11 72,392,606 72,551,620 RGD:9068941
G PTCH1 patched 1 JBrowse link 9 94,668,792 94,741,517 RGD:9068941
neural plate mediolateral regionalization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BMPR1A bone morphogenetic protein receptor type 1A JBrowse link 10 86,742,248 86,912,912 RGD:9068941
neural tube patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ARL13B ADP ribosylation factor like GTPase 13B JBrowse link 3 97,725,136 97,799,932 RGD:9068941
G IFT140 intraflagellar transport 140 JBrowse link 16 1,566,309 1,662,833 RGD:9068941
G PTCH1 patched 1 JBrowse link 9 94,668,792 94,741,517 RGD:9068941
G RPGRIP1L RPGRIP1 like JBrowse link 16 52,920,790 53,023,178 RGD:9068941
G TMEM107 transmembrane protein 107 JBrowse link 17 48,214,389 48,217,773 RGD:9068941
G TRAF3IP1 TRAF3 interacting protein 1 JBrowse link 2B 244,404,777 244,481,785 RGD:9068941
nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 JBrowse link 6 141,213,671 141,215,919 RGD:9068941
G FOXH1 forkhead box H1 JBrowse link 8 144,229,228 144,231,829 RGD:9068941
G NODAL nodal growth differentiation factor JBrowse link 10 69,433,959 69,443,972 RGD:9068941
organ induction term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FGF1 fibroblast growth factor 1 JBrowse link 5 144,056,387 144,161,906 RGD:9068941
G FGF10 fibroblast growth factor 10 JBrowse link 5 71,028,324 71,111,713 RGD:9068941
G FGF8 fibroblast growth factor 8 JBrowse link 10 101,844,792 101,849,873 RGD:9068941
G FGFR1 fibroblast growth factor receptor 1 JBrowse link 8 34,890,147 34,948,904 RGD:9068941
G FRS2 fibroblast growth factor receptor substrate 2 JBrowse link 12 69,767,526 69,878,293 RGD:9068941
G GDNF glial cell derived neurotrophic factor JBrowse link 5 77,573,466 77,600,478 RGD:9068941
G HOXA11 homeobox A11 JBrowse link 7 27,426,602 27,429,092 RGD:9068941
G HOXC11 homeobox C11 JBrowse link 12 35,567,093 35,570,396 RGD:9068941
G SIX1 SIX homeobox 1 JBrowse link 14 59,515,324 59,518,740 RGD:9068941
G SPRY1 sprouty RTK signaling antagonist 1 JBrowse link 4 126,715,650 126,720,973 RGD:9068941
P granule organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PLD6 phospholipase D family member 6 JBrowse link 17 39,016,859 39,023,398 RGD:9068941
G TDRD5 tudor domain containing 5 JBrowse link 1 158,761,004 158,852,660 RGD:9068941
pattern specification involved in metanephros development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G OSR1 odd-skipped related transcription factor 1 JBrowse link 2A 19,451,067 19,458,229 RGD:9068941
polarity specification of anterior/posterior axis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SHH sonic hedgehog signaling molecule JBrowse link 7 159,116,966 159,126,660 RGD:9068941
G WNT8A Wnt family member 8A JBrowse link 5 139,598,229 139,605,926 RGD:9068941
polarity specification of proximal/distal axis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NODAL nodal growth differentiation factor JBrowse link 10 69,433,959 69,443,972 RGD:9068941
G WNT8A Wnt family member 8A JBrowse link 5 139,598,229 139,605,926 RGD:9068941
positive regulation of determination of dorsal identity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACVR1 activin A receptor type 1 JBrowse link 2B 162,234,823 162,372,533 RGD:9068941
G CTNNB1 catenin beta 1 JBrowse link 3 41,372,368 41,414,030 RGD:9068941
positive regulation of heart induction by negative regulation of canonical Wnt signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DKK1 dickkopf WNT signaling pathway inhibitor 1 JBrowse link 10 51,084,963 51,088,424 RGD:9068941
G MESP1 mesoderm posterior bHLH transcription factor 1 JBrowse link 15 87,645,768 87,647,210 RGD:9068941
positive regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NODAL nodal growth differentiation factor JBrowse link 10 69,433,959 69,443,972 RGD:9068941
G SMAD2 SMAD family member 2 JBrowse link 18 44,572,213 44,669,008 RGD:9068941
positive regulation of Notch signaling pathway involved in heart induction term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GATA5 GATA binding protein 5 JBrowse link 20 60,147,020 60,158,901 RGD:9068941
G MESP1 mesoderm posterior bHLH transcription factor 1 JBrowse link 15 87,645,768 87,647,210 RGD:9068941
G ROBO1 roundabout guidance receptor 1 JBrowse link 3 80,579,716 81,001,219 RGD:9068941
G ROBO2 roundabout guidance receptor 2 JBrowse link 3 78,302,882 79,636,211 RGD:9068941
positive regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GORAB golgin, RAB6 interacting JBrowse link 1 149,736,635 149,758,010 RGD:9068941
posterior compartment specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PBX3 PBX homeobox 3 JBrowse link 9 125,379,110 125,599,634 RGD:9068941
primary heart field specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G MEF2C myocyte enhancer factor 2C JBrowse link 5 26,620,837 26,786,426 RGD:9068941
primitive streak formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ETS2 ETS proto-oncogene 2, transcription factor JBrowse link 21 38,505,685 38,527,651 RGD:9068941
G FOXA2 forkhead box A2 JBrowse link 20 22,872,251 22,874,997 RGD:9068941
G GDF3 growth differentiation factor 3 JBrowse link 12 7,972,941 7,979,654 RGD:9068941
G LHX1 LIM homeobox 1 JBrowse link 17 20,430,618 20,437,751 RGD:9068941
G LRP6 LDL receptor related protein 6 JBrowse link 12 12,508,108 12,658,074 RGD:9068941
G OTX2 orthodenticle homeobox 2 JBrowse link 14 55,641,349 55,651,012 RGD:9068941
G SRF serum response factor JBrowse link 6 44,057,192 44,066,768 RGD:9068941
G TBXT T-box transcription factor T JBrowse link 6 169,095,723 169,106,595 RGD:9068941
G WNT5A Wnt family member 5A JBrowse link 3 56,617,006 56,639,367 RGD:9068941
pronephric field specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PAX2 paired box 2 JBrowse link 10 100,822,676 100,904,065 RGD:9068941
G PAX8 paired box 8 JBrowse link 2A 114,162,110 114,222,865 RGD:9068941
proximal/distal axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SIX3 SIX homeobox 3 JBrowse link 2A 45,978,828 45,988,078 RGD:9068941
proximal/distal pattern formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 JBrowse link 15 55,237,101 55,349,851 RGD:9068941
G CHSY1 chondroitin sulfate synthase 1 JBrowse link 15 99,186,705 99,259,882 RGD:9068941
G CTNNB1 catenin beta 1 JBrowse link 3 41,372,368 41,414,030 RGD:9068941
G DLL1 delta like canonical Notch ligand 1 JBrowse link 6 173,535,941 173,545,362 RGD:9068941
G DLX1 distal-less homeobox 1 JBrowse link 2B 176,839,361 176,843,909 RGD:9068941
G DLX2 distal-less homeobox 2 JBrowse link 2B 176,853,913 176,857,079 RGD:9068941
G GLI1 GLI family zinc finger 1 JBrowse link 12 31,710,051 31,722,473 RGD:9068941
G GLI2 GLI family zinc finger 2 JBrowse link 2B 121,242,932 121,499,411 RGD:9068941
G GLI3 GLI family zinc finger 3 JBrowse link 7 42,056,566 42,322,865 RGD:9068941
G GREM1 gremlin 1, DAN family BMP antagonist JBrowse link 15 30,051,483 30,068,243 RGD:9068941
G HOXA10 homeobox A10 JBrowse link 7 27,414,527 27,418,240 RGD:9068941
G HOXA11 homeobox A11 JBrowse link 7 27,426,602 27,429,092 RGD:9068941
G HOXA9 homeobox A9 JBrowse link 7 27,406,624 27,409,984 RGD:9068941
G HOXC10 homeobox C10 JBrowse link 12 35,553,262 35,558,393 RGD:9068941
G HOXC11 homeobox C11 JBrowse link 12 35,567,093 35,570,396 RGD:9068941
G HOXD10 homeobox D10 JBrowse link 2B 181,104,876 181,108,942 RGD:9068941
G HOXD9 homeobox D9 JBrowse link 2B 181,111,939 181,114,176 RGD:9068941
G LOC100990990 cytochrome P450 26B1 JBrowse link 2A 73,667,847 73,686,433 RGD:9068941
G LRP4 LDL receptor related protein 4 JBrowse link 11 47,364,195 47,409,143 RGD:9068941
G PBX1 PBX homeobox 1 JBrowse link 1 143,778,426 144,104,493 RGD:9068941
G PBX2 PBX homeobox 2 JBrowse link 6 32,708,252 32,717,181 RGD:9068941
G SP8 Sp8 transcription factor JBrowse link 7 20,772,300 20,778,071 RGD:9068941
G TP63 tumor protein p63 JBrowse link 3 195,172,810 195,473,085 RGD:9068941
proximal/distal pattern formation involved in metanephric nephron development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G IRX1 iroquois homeobox 1 JBrowse link 5 3,610,229 3,615,279 RGD:9068941
G IRX2 iroquois homeobox 2 JBrowse link 5 2,776,054 2,777,005 RGD:9068941
radial pattern formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NR2F2 nuclear receptor subfamily 2 group F member 2 JBrowse link 15 94,196,494 94,210,599 RGD:9068941
regulation of adaxial/abaxial pattern formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G EED embryonic ectoderm development JBrowse link 11 84,902,330 84,937,906 RGD:9068941
regulation of cell motility involved in somitogenic axis elongation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NKD1 NKD inhibitor of WNT signaling pathway 1 JBrowse link 16 49,691,011 49,778,732 RGD:9068941
G PPP2R3A protein phosphatase 2 regulatory subunit B''alpha JBrowse link 3 140,485,926 140,666,592 RGD:9068941
regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NOG noggin JBrowse link 17 55,532,208 55,533,782 RGD:9068941
regulation of heart induction by regulation of canonical Wnt signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G POU5F1 POU class 5 homeobox 1 JBrowse link 6 31,775,343 31,781,426 RGD:9068941
regulation of heart looping term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RNF207 ring finger protein 207 JBrowse link 1 6,228,829 6,242,778 RGD:9068941
regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SHH sonic hedgehog signaling molecule JBrowse link 7 159,116,966 159,126,660 RGD:9068941
regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G MKS1 MKS transition zone complex subunit 1 JBrowse link 17 57,137,254 57,151,122 RGD:9068941
regulation of somitogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CDX1 caudal type homeobox 1 JBrowse link 5 151,596,478 151,614,257 RGD:9068941
G CDX2 caudal type homeobox 2 JBrowse link 13 27,585,194 27,593,632 RGD:9068941
G DLL1 delta like canonical Notch ligand 1 JBrowse link 6 173,535,941 173,545,362 RGD:9068941
G DMRT2 doublesex and mab-3 related transcription factor 2 JBrowse link 9 1,054,211 1,061,228 RGD:9068941
G HES7 hes family bHLH transcription factor 7 JBrowse link 17 48,266,123 48,269,274 RGD:9068941
G LFNG LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase JBrowse link 7 2,876,721 2,884,926 RGD:9068941
G NOTCH1 notch receptor 1 JBrowse link 9 136,544,639 136,595,511 RGD:9068941
regulation of transcription from RNA polymerase II promoter involved in ventral spinal cord interneuron specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G EVX1 even-skipped homeobox 1 JBrowse link 7 27,486,329 27,491,245 RGD:9068941
G NKX6-1 NK6 homeobox 1 JBrowse link 4 45,534,145 45,538,784 RGD:9068941
G NKX6-2 NK6 homeobox 2 JBrowse link 10 133,682,456 133,683,445 RGD:9068941
G PAX6 paired box 6 JBrowse link 11 31,641,813 31,671,071 RGD:9068941
regulation of transcription involved in anterior/posterior axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DDIT3 DNA damage inducible transcript 3 JBrowse link 12 31,664,766 31,668,699 RGD:9068941
G WNT8A Wnt family member 8A JBrowse link 5 139,598,229 139,605,926 RGD:9068941
retinoic acid receptor signaling pathway involved in somitogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 JBrowse link 15 55,237,101 55,349,851 RGD:9068941
rostrocaudal neural tube patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATP6AP2 ATPase H+ transporting accessory protein 2 JBrowse link X 40,730,677 40,756,209 RGD:9068941
G SOX17 SRY-box 17 JBrowse link 8 48,257,287 48,259,808 RGD:9068941
secondary heart field specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AXIN2 axin 2 JBrowse link 17 64,688,416 64,720,086 RGD:9068941
G BMP4 bone morphogenetic protein 4 JBrowse link 14 52,821,872 52,828,781 RGD:9068941
G FOXH1 forkhead box H1 JBrowse link 8 144,229,228 144,231,829 RGD:9068941
G ISL1 ISL LIM homeobox 1 JBrowse link 5 64,253,037 64,264,674 RGD:9068941
G LRP2 LDL receptor related protein 2 JBrowse link 2B 173,873,454 174,103,911 RGD:9068941
G MEF2C myocyte enhancer factor 2C JBrowse link 5 26,620,837 26,786,426 RGD:9068941
G MESP1 mesoderm posterior bHLH transcription factor 1 JBrowse link 15 87,645,768 87,647,210 RGD:9068941
G RBPJ recombination signal binding protein for immunoglobulin kappa J region JBrowse link 4 25,996,223 26,107,683 RGD:9068941
G SMARCD3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 JBrowse link 7 154,977,708 155,013,783 RGD:9068941
segment specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BMI1 BMI1 proto-oncogene, polycomb ring finger JBrowse link 10 22,854,230 22,863,482 RGD:9068941
G DVL2 dishevelled segment polarity protein 2 JBrowse link 17 7,242,493 7,251,572 RGD:9068941
G HOXA2 homeobox A2 JBrowse link 7 27,344,100 27,346,794 RGD:9068941
G MAFB MAF bZIP transcription factor B JBrowse link 20 38,125,705 38,128,724 RGD:9068941
G MLLT3 MLLT3 super elongation complex subunit JBrowse link 9 20,799,010 21,073,150 RGD:9068941
G MSGN1 mesogenin 1 JBrowse link 2A 17,926,024 17,927,301 RGD:9068941
G MTF2 metal response element binding transcription factor 2 JBrowse link 1 94,481,877 94,541,506 RGD:9068941
segmentation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACD ACD shelterin complex subunit and telomerase recruitment factor JBrowse link 16 67,390,703 67,393,685 RGD:9068941
sensory organ boundary specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NTF4 neurotrophin 4 JBrowse link 19 54,994,710 55,010,424 RGD:9068941
smoothened signaling pathway involved in dorsal/ventral neural tube patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GLI2 GLI family zinc finger 2 JBrowse link 2B 121,242,932 121,499,411 RGD:9068941
G GLI3 GLI family zinc finger 3 JBrowse link 7 42,056,566 42,322,865 RGD:9068941
G IFT122 intraflagellar transport 122 JBrowse link 3 133,851,433 133,930,117 RGD:9068941
G PTCH1 patched 1 JBrowse link 9 94,668,792 94,741,517 RGD:9068941
G TBC1D32 TBC1 domain family member 32 JBrowse link 6 123,021,640 123,274,114 RGD:9068941
G TULP3 TUB like protein 3 JBrowse link 12 2,944,769 2,993,287 RGD:9068941
G WDR19 WD repeat domain 19 JBrowse link 4 39,365,204 39,470,074 RGD:9068941
smoothened signaling pathway involved in spinal cord motor neuron cell fate specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GLI2 GLI family zinc finger 2 JBrowse link 2B 121,242,932 121,499,411 RGD:9068941
G GLI3 GLI family zinc finger 3 JBrowse link 7 42,056,566 42,322,865 RGD:9068941
G SUFU SUFU negative regulator of hedgehog signaling JBrowse link 10 102,571,886 102,696,472 RGD:9068941
smoothened signaling pathway involved in ventral spinal cord interneuron specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GLI2 GLI family zinc finger 2 JBrowse link 2B 121,242,932 121,499,411 RGD:9068941
G GLI3 GLI family zinc finger 3 JBrowse link 7 42,056,566 42,322,865 RGD:9068941
G SUFU SUFU negative regulator of hedgehog signaling JBrowse link 10 102,571,886 102,696,472 RGD:9068941
smoothened signaling pathway involved in ventral spinal cord patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SMO smoothened, frizzled class receptor JBrowse link 7 133,668,523 133,693,048 RGD:9068941
somite rostral/caudal axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G EPB41L5 erythrocyte membrane protein band 4.1 like 5 JBrowse link 2B 120,521,139 120,687,209 RGD:9068941
G GDF3 growth differentiation factor 3 JBrowse link 12 7,972,941 7,979,654 RGD:9068941
G KDM6A lysine demethylase 6A JBrowse link X 45,127,382 45,362,029 RGD:9068941
G LHX1 LIM homeobox 1 JBrowse link 17 20,430,618 20,437,751 RGD:9068941
G NRARP NOTCH regulated ankyrin repeat protein JBrowse link 9 137,331,244 137,331,666 RGD:9068941
G RIPPLY1 ripply transcriptional repressor 1 JBrowse link X 106,377,932 106,381,193 RGD:9068941
G RIPPLY2 ripply transcriptional repressor 2 JBrowse link 6 85,022,737 85,027,930 RGD:9068941
G SMAD4 SMAD family member 4 JBrowse link 18 47,692,311 47,802,530 RGD:9068941
G TBX6 T-box 6 JBrowse link 16 30,460,305 30,467,090 RGD:9068941
G TMED2 transmembrane p24 trafficking protein 2 JBrowse link 12 125,397,391 125,410,799 RGD:9068941
somite specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G COBL cordon-bleu WH2 repeat protein JBrowse link 7 51,894,468 52,114,849 RGD:9068941
G DLL1 delta like canonical Notch ligand 1 JBrowse link 6 173,535,941 173,545,362 RGD:9068941
G MEOX1 mesenchyme homeobox 1 JBrowse link 17 13,982,668 14,003,820 RGD:9068941
G MEOX2 mesenchyme homeobox 2 JBrowse link 7 15,598,460 15,673,935 RGD:9068941
G RIPPLY1 ripply transcriptional repressor 1 JBrowse link X 106,377,932 106,381,193 RGD:9068941
somitogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ABI1 abl interactor 1 JBrowse link 10 27,227,960 27,339,434 RGD:9068941
G ATM ATM serine/threonine kinase JBrowse link 11 106,584,228 106,728,457 RGD:9068941
G AXIN2 axin 2 JBrowse link 17 64,688,416 64,720,086 RGD:9068941
G BHLHE40 basic helix-loop-helix family member e40 JBrowse link 3 5,028,217 5,033,968 RGD:9068941
G BHLHE41 basic helix-loop-helix family member e41 JBrowse link 12 62,806,113 62,810,773 RGD:9068941
G BMPR1A bone morphogenetic protein receptor type 1A JBrowse link 10 86,742,248 86,912,912 RGD:9068941
G CRB2 crumbs cell polarity complex component 2 JBrowse link 9 123,011,887 123,034,544 RGD:9068941
G DLL1 delta like canonical Notch ligand 1 JBrowse link 6 173,535,941 173,545,362 RGD:9068941
G DLL3 delta like canonical Notch ligand 3 JBrowse link 19 45,144,641 45,154,854 RGD:9068941
G EP300 E1A binding protein p300 JBrowse link 22 40,079,214 40,168,936 RGD:9068941
G FOXB1 forkhead box B1 JBrowse link 15 57,283,337 57,286,487 RGD:9068941
G FOXC2 forkhead box C2 JBrowse link 16 86,569,509 86,571,878 RGD:9068941
G FOXF1 forkhead box F1 JBrowse link 16 86,515,150 86,519,949 RGD:9068941
G HES1 hes family bHLH transcription factor 1 JBrowse link 3 201,749,044 201,751,591 RGD:9068941
G HES2 hes family bHLH transcription factor 2 JBrowse link 1 6,431,208 6,435,896 RGD:9068941
G HES3 hes family bHLH transcription factor 3 JBrowse link 1 6,264,032 6,268,002 RGD:9068941
G HES6 hes family bHLH transcription factor 6 JBrowse link 2B 244,321,070 244,322,237 RGD:9068941
G HES7 hes family bHLH transcription factor 7 JBrowse link 17 48,266,123 48,269,274 RGD:9068941
G KAT2A lysine acetyltransferase 2A JBrowse link 17 15,416,075 15,424,197 RGD:9068941
G LEF1 lymphoid enhancer binding factor 1 JBrowse link 4 111,125,312 111,245,980 RGD:9068941
G LFNG LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase JBrowse link 7 2,876,721 2,884,926 RGD:9068941
G MESP1 mesoderm posterior bHLH transcription factor 1 JBrowse link 15 87,645,768 87,647,210 RGD:9068941
G MESP2 mesoderm posterior bHLH transcription factor 2 JBrowse link 15 87,673,337 87,675,698 RGD:9068941
G MIB1 mindbomb E3 ubiquitin protein ligase 1 JBrowse link 18 18,579,023 18,746,335 RGD:9068941
G MSGN1 mesogenin 1 JBrowse link 2A 17,926,024 17,927,301 RGD:9068941
G MYF5 myogenic factor 5 JBrowse link 12 81,347,640 81,350,389 RGD:9068941
G MYF6 myogenic factor 6 JBrowse link 12 81,338,339 81,340,176 RGD:9068941
G NKX3-1 NK3 homeobox 1 JBrowse link 8 19,860,748 19,864,968 RGD:9068941
G NLE1 notchless homolog 1 JBrowse link 17 21,935,800 21,946,049 RGD:9068941
G PALB2 partner and localizer of BRCA2 JBrowse link 16 23,855,535 23,892,117 RGD:9068941
G PAX1 paired box 1 JBrowse link 20 21,623,771 21,633,468 RGD:9068941
G PLXNA2 plexin A2 JBrowse link 1 188,408,041 188,654,934 RGD:9068941
G POFUT1 protein O-fucosyltransferase 1 JBrowse link 20 29,625,481 29,655,722 RGD:9068941
G POGLUT1 protein O-glucosyltransferase 1 JBrowse link 3 123,503,899 123,529,919 RGD:9068941
G PRKDC protein kinase, DNA-activated, catalytic subunit JBrowse link 8 41,593,022 41,778,299 RGD:9068941
G PSEN1 presenilin 1 JBrowse link 14 72,579,024 72,663,876 RGD:9068941
G RBPJ recombination signal binding protein for immunoglobulin kappa J region JBrowse link 4 25,996,223 26,107,683 RGD:9068941
G RIPPLY2 ripply transcriptional repressor 2 JBrowse link 6 85,022,737 85,027,930 RGD:9068941
G ROR2 receptor tyrosine kinase like orphan receptor 2 JBrowse link 9 90,879,826 90,939,834 RGD:9068941
G SEMA3C semaphorin 3C JBrowse link 7 86,369,036 86,545,580 RGD:9068941
G SMAD3 SMAD family member 3 JBrowse link 15 64,284,949 64,414,185 RGD:9068941
G TBXT T-box transcription factor T JBrowse link 6 169,095,723 169,106,595 RGD:9068941
G TCAP titin-cap JBrowse link 17 17,839,139 17,841,500 RGD:9068941
G TCF15 transcription factor 15 JBrowse link 20 581,915 587,644 RGD:9068941
G TP53 tumor protein p53 JBrowse link 17 7,687,132 7,706,120 RGD:9068941
G WNT5A Wnt family member 5A JBrowse link 3 56,617,006 56,639,367 RGD:9068941
G XRCC2 X-ray repair cross complementing 2 JBrowse link 7 156,378,685 156,406,516 RGD:9068941
G ZEB2 zinc finger E-box binding homeobox 2 JBrowse link 2B 148,460,904 148,596,500 RGD:9068941
specification of animal organ identity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TBR1 T-box, brain 1 JBrowse link 2B 166,079,344 166,089,098 RGD:9068941
specification of animal organ position term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BMP4 bone morphogenetic protein 4 JBrowse link 14 52,821,872 52,828,781 RGD:9068941
G HOXA3 homeobox A3 JBrowse link 7 27,350,491 27,371,169 RGD:9068941
G TBX3 T-box 3 JBrowse link 12 115,618,420 115,632,327 RGD:9068941
specification of anterior mesonephric tubule identity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G OSR1 odd-skipped related transcription factor 1 JBrowse link 2A 19,451,067 19,458,229 RGD:9068941
specification of axis polarity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AHI1 Abelson helper integration site 1 JBrowse link 6 137,149,457 137,366,731 RGD:9068941
G BCOR BCL6 corepressor JBrowse link X 40,203,565 40,328,788 RGD:9068941
specification of loop of Henle identity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G IRX1 iroquois homeobox 1 JBrowse link 5 3,610,229 3,615,279 RGD:9068941
G IRX2 iroquois homeobox 2 JBrowse link 5 2,776,054 2,777,005 RGD:9068941
G IRX3 iroquois homeobox 3 JBrowse link 16 53,622,028 53,627,033 RGD:9068941
specification of posterior mesonephric tubule identity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G OSR1 odd-skipped related transcription factor 1 JBrowse link 2A 19,451,067 19,458,229 RGD:9068941
specification of ureteric bud anterior/posterior symmetry by BMP signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BMP4 bone morphogenetic protein 4 JBrowse link 14 52,821,872 52,828,781 RGD:9068941
spinal cord anterior/posterior patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GDF11 growth differentiation factor 11 JBrowse link 12 33,879,143 33,893,027 RGD:9068941
spinal cord dorsal/ventral patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GLI2 GLI family zinc finger 2 JBrowse link 2B 121,242,932 121,499,411 RGD:9068941
G INTU inturned planar cell polarity protein JBrowse link 4 131,109,630 131,186,930 RGD:9068941
G SHH sonic hedgehog signaling molecule JBrowse link 7 159,116,966 159,126,660 RGD:9068941
spinal cord patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RELN reelin JBrowse link 7 108,208,344 108,728,037 RGD:9068941
telencephalon regionalization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BMP2 bone morphogenetic protein 2 JBrowse link 20 6,546,173 6,558,627 RGD:9068941
G BMP4 bone morphogenetic protein 4 JBrowse link 14 52,821,872 52,828,781 RGD:9068941
G GSX2 GS homeobox 2 JBrowse link 4 76,397,771 76,399,715 RGD:9068941
G LHX2 LIM homeobox 2 JBrowse link 9 123,655,845 123,676,803 RGD:9068941
G SHH sonic hedgehog signaling molecule JBrowse link 7 159,116,966 159,126,660 RGD:9068941
G SIX3 SIX homeobox 3 JBrowse link 2A 45,978,828 45,988,078 RGD:9068941
thorax and anterior abdomen determination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BASP1 brain abundant membrane attached signal protein 1 JBrowse link 5 17,352,374 17,410,703 RGD:9068941
G DCANP1 dendritic cell associated nuclear protein JBrowse link 5 136,979,950 136,980,694 RGD:9068941
G NEUROG1 neurogenin 1 JBrowse link 5 137,063,644 137,065,317 RGD:9068941
G TIFAB TIFA inhibitor JBrowse link 5 136,982,454 136,985,986 RGD:9068941
G WT1 WT1 transcription factor JBrowse link 11 32,238,720 32,282,879 RGD:9068941
transforming growth factor beta receptor signaling pathway involved in primitive streak formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NODAL nodal growth differentiation factor JBrowse link 10 69,433,959 69,443,972 RGD:9068941
ventral midline determination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SMO smoothened, frizzled class receptor JBrowse link 7 133,668,523 133,693,048 RGD:9068941
ventral spinal cord interneuron fate commitment term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ASCL1 achaete-scute family bHLH transcription factor 1 JBrowse link 12 103,931,707 103,934,554 RGD:9068941
G DLL4 delta like canonical Notch ligand 4 JBrowse link 15 38,121,238 38,130,950 RGD:9068941
G FOXN4 forkhead box N4 JBrowse link 12 110,250,547 110,280,876 RGD:9068941
ventral spinal cord interneuron fate determination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NKX2-2 NK2 homeobox 2 JBrowse link 20 21,429,388 21,432,492 RGD:9068941
ventral spinal cord interneuron specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DBX1 developing brain homeobox 1 JBrowse link 11 20,093,083 20,097,227 RGD:9068941
G DMRT3 doublesex and mab-3 related transcription factor 3 JBrowse link 9 980,586 994,885 RGD:9068941
G LHX3 LIM homeobox 3 JBrowse link 9 136,252,974 136,260,366 RGD:9068941
ventral trunk neural crest cell migration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NRP1 neuropilin 1 JBrowse link 10 33,883,162 34,039,645 RGD:9068941
G NRP2 neuropilin 2 JBrowse link 2B 211,042,324 211,157,547 RGD:9068941
G SEMA3A semaphorin 3A JBrowse link 7 89,590,353 89,827,253 RGD:9068941
G SEMA3F semaphorin 3F JBrowse link 3 51,318,089 51,351,958 RGD:9068941
vertebrate eye-specific patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G C1QA complement C1q A chain JBrowse link 1 22,770,557 22,773,682 RGD:9068941
G C3 complement C3 JBrowse link 19 6,629,240 6,674,786 RGD:9068941
G ITGAM integrin subunit alpha M JBrowse link 16 31,630,983 31,702,406 RGD:9068941
Wnt signaling pathway involved in somitogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DKK1 dickkopf WNT signaling pathway inhibitor 1 JBrowse link 10 51,084,963 51,088,424 RGD:9068941
G LRP6 LDL receptor related protein 6 JBrowse link 12 12,508,108 12,658,074 RGD:9068941
G PPP2R3A protein phosphatase 2 regulatory subunit B''alpha JBrowse link 3 140,485,926 140,666,592 RGD:9068941
G SFRP1 secreted frizzled related protein 1 JBrowse link 8 37,956,423 38,001,865 RGD:9068941
G SFRP2 secreted frizzled related protein 2 JBrowse link 4 157,944,733 157,953,258 RGD:9068941
zygotic determination of anterior/posterior axis, embryo term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PCSK6 proprotein convertase subtilisin/kexin type 6 JBrowse link 15 99,312,512 99,456,295 RGD:9068941
zygotic specification of dorsal/ventral axis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CXXC4 CXXC finger protein 4 JBrowse link 4 107,545,344 107,568,254 RGD:9068941
G SMAD2 SMAD family member 2 JBrowse link 18 44,572,213 44,669,008 RGD:9068941
G SMAD6 SMAD family member 6 JBrowse link 15 63,923,356 64,001,607 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15692
    multicellular organismal process 7000
      pattern specification process 432
        axis specification + 85
        cell fate commitment involved in pattern specification + 14
        embryonic pattern specification + 62
        head segmentation + 0
        imaginal disc lineage restriction + 0
        internode patterning 0
        intracellular mRNA localization involved in pattern specification process + 0
        lung pattern specification process + 1
        maintenance of left/right asymmetry + 0
        neural plate pattern specification + 8
        ommatidial rotation 0
        pattern specification involved in kidney development + 7
        regionalization + 340
        regulation of R8 cell spacing in compound eye + 0
        renal system pattern specification + 7
        segment specification + 16
        specification of axis polarity + 5
        specification of symmetry + 123
Path 2
Term Annotations click to browse term
  biological_process 15692
    developmental process 5934
      anatomical structure development 5572
        multicellular organism development 5115
          pattern specification process 432
            axis specification + 85
            cell fate commitment involved in pattern specification + 14
            embryonic pattern specification + 62
            head segmentation + 0
            imaginal disc lineage restriction + 0
            internode patterning 0
            intracellular mRNA localization involved in pattern specification process + 0
            lung pattern specification process + 1
            maintenance of left/right asymmetry + 0
            neural plate pattern specification + 8
            ommatidial rotation 0
            pattern specification involved in kidney development + 7
            regionalization + 340
            regulation of R8 cell spacing in compound eye + 0
            renal system pattern specification + 7
            segment specification + 16
            specification of axis polarity + 5
            specification of symmetry + 123
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.