ONTOLOGY REPORT - ANNOTATIONS


Term:pattern specification process
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Accession:GO:0007389 term browser browse the term
Definition:Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate.
Synonyms:related_synonym: pattern biosynthesis;   pattern formation


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pattern specification process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acvr1 activin A receptor type 1 JBrowse link NW_004955449 15,587,958 15,706,432 RGD:9068941
G Acvr1b activin A receptor type 1B JBrowse link NW_004955547 2,311,573 2,366,106 RGD:9068941
G Acvr1c activin A receptor type 1C JBrowse link NW_004955449 15,814,230 15,864,747 RGD:9068941
G Acvr2a activin A receptor type 2A JBrowse link NW_004955440 13,849,926 13,931,374 RGD:9068941
G Acvr2b activin A receptor type 2B JBrowse link NW_004955427 25,438,652 25,467,360 RGD:9068941
G Acvrl1 activin A receptor like type 1 JBrowse link NW_004955547 2,278,548 2,293,865 RGD:9068941
G Alx3 ALX homeobox 3 JBrowse link NW_004955435 13,584,129 13,594,316 RGD:9068941
G Amhr2 anti-Mullerian hormone receptor type 2 JBrowse link NW_004955458 693,434 703,026 RGD:9068941
G Apc APC regulator of WNT signaling pathway JBrowse link NW_004955418 2,567,804 2,675,062 RGD:9068941
G Apc2 APC regulator of WNT signaling pathway 2 JBrowse link NW_004955495 6,466,434 6,489,612 RGD:9068941
G Asph aspartate beta-hydroxylase JBrowse link NW_004955444 17,116,060 17,320,966 RGD:9068941
G Bmp5 bone morphogenetic protein 5 JBrowse link NW_004955411 450,674 557,213 RGD:9068941
G Bmpr1a bone morphogenetic protein receptor type 1A JBrowse link NW_004955510 5,812,571 5,936,312 RGD:9068941
G Bmpr1b bone morphogenetic protein receptor type 1B JBrowse link NW_004955405 5,408,171 5,784,930 RGD:9068941
G Bmpr2 bone morphogenetic protein receptor type 2 JBrowse link NW_004955457 12,235,780 12,315,680 RGD:9068941
G Dchs1 dachsous cadherin-related 1 JBrowse link NW_004955414 22,331,590 22,365,761 RGD:9068941
G Eya1 EYA transcriptional coactivator and phosphatase 1 JBrowse link NW_004955444 8,336,071 8,655,041 RGD:9068941
G Foxj1 forkhead box J1 JBrowse link NW_004955506 6,127,551 6,132,302 RGD:9068941
G Gli2 GLI family zinc finger 2 JBrowse link NW_004955459 8,892,917 9,124,672 RGD:9068941
G Grhl3 grainyhead like transcription factor 3 JBrowse link NW_004955452 4,125,792 4,159,699 RGD:9068941
G Hoxb1 homeobox B1 JBrowse link NW_004955451 12,707,560 12,708,950 RGD:9068941
G Hoxd12 homeobox D12 JBrowse link NW_004955403 20,562,248 20,563,205 RGD:9068941
G Lhx1 LIM homeobox 1 JBrowse link NW_004955451 1,037,936 1,048,501 RGD:9068941
G Mfng MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase JBrowse link NW_004955413 23,901,987 23,917,720 RGD:9068941
G Mid1 midline 1 JBrowse link NW_004955544 2,379,766 2,718,282 RGD:9068941
G Nrg3 neuregulin 3 JBrowse link NW_004955510 1,615,316 2,620,031 RGD:9068941
G Rax retina and anterior neural fold homeobox JBrowse link NW_004955402 43,408,933 43,414,697 RGD:9068941
G Rfng RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase JBrowse link NW_004955506 1,110,146 1,113,130 RGD:9068941
G Rnf111 ring finger protein 111 JBrowse link NW_004955450 15,590,053 15,651,344 RGD:9068941
G Shh sonic hedgehog signaling molecule JBrowse link NW_004955491 8,647,133 8,657,381 RGD:9068941
G Shroom3 shroom family member 3 JBrowse link NW_004955433 1,135,589 1,423,449 RGD:9068941
G Six1 SIX homeobox 1 JBrowse link NW_004955466 8,961,597 8,966,069 RGD:9068941
G Sostdc1 sclerostin domain containing 1 JBrowse link NW_004955410 19,657,805 19,662,121 RGD:9068941
G Syngap1 synaptic Ras GTPase activating protein 1 JBrowse link NW_004955437 1,950,559 1,981,004 RGD:9068941
G Tbx1 T-box 1 JBrowse link NW_004955442 18,320,674 18,327,062 RGD:9068941
G Tbx5 T-box 5 JBrowse link NW_004955455 16,133,130 16,217,894 RGD:9068941
G Tgfbr1 transforming growth factor beta receptor 1 JBrowse link NW_004955419 26,490,899 26,546,349 RGD:9068941
G Tgfbr2 transforming growth factor beta receptor 2 JBrowse link NW_004955430 21,919,338 21,999,688 RGD:9068941
G Uncx UNC homeobox JBrowse link NW_004955460 8,941,629 8,945,761 RGD:9068941
G Zeb1 zinc finger E-box binding homeobox 1 JBrowse link NW_004955429 23,011,627 23,198,188 RGD:9068941
G Zic1 Zic family member 1 JBrowse link NW_004955474 10,029,226 10,033,104 RGD:9068941
activation of prostate induction by androgen receptor signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ar androgen receptor JBrowse link NW_004955475 7,013,960 7,192,473 RGD:9068941
anterior compartment pattern formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pbx3 PBX homeobox 3 JBrowse link NW_004955419 2,419,081 2,624,299 RGD:9068941
anterior/posterior axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aurka aurora kinase A JBrowse link NW_004955445 2,831,073 2,853,151 RGD:9068941
G Bmp4 bone morphogenetic protein 4 JBrowse link NW_004955409 9,432,835 9,439,680 RGD:9068941
G Cdx1 caudal type homeobox 1 JBrowse link NW_004955415 4,337,903 4,355,782 RGD:9068941
G Cdx2 caudal type homeobox 2 JBrowse link NW_004955497 7,316,372 7,321,627 RGD:9068941
G Cer1 cerberus 1, DAN family BMP antagonist JBrowse link NW_004955434 17,738,281 17,740,823 RGD:9068941
G Ctnnb1 catenin beta 1 JBrowse link NW_004955420 29,030,716 29,047,447 RGD:9068941
G Gpc3 glypican 3 JBrowse link NW_004955473 969,627 1,431,706 RGD:9068941
G Hey2 hes related family bHLH transcription factor with YRPW motif 2 JBrowse link NW_004955436 7,060,930 7,070,610 RGD:9068941
G Ldb1 LIM domain binding 1 JBrowse link NW_004955485 8,229,517 8,242,003 RGD:9068941
G Lhx1 LIM homeobox 1 JBrowse link NW_004955451 1,037,936 1,048,501 RGD:9068941
G Pgap1 post-GPI attachment to proteins 1 JBrowse link NW_004955403 3,527,398 3,582,004 RGD:9068941
G Rnf2 ring finger protein 2 JBrowse link NW_004955406 23,672,947 23,725,253 RGD:9068941
G Six2 SIX homeobox 2 JBrowse link NW_004955441 12,029,530 12,033,214 RGD:9068941
G Ski SKI proto-oncogene JBrowse link NW_004955486 8,857,693 8,921,821 RGD:9068941
G Wls Wnt ligand secretion mediator JBrowse link NW_004955423 23,374,401 23,465,308 RGD:9068941
anterior/posterior axis specification, embryo term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Frs2 fibroblast growth factor receptor substrate 2 JBrowse link NW_004955405 9,785,857 9,884,220 RGD:9068941
G Fzd5 frizzled class receptor 5 JBrowse link NW_004955457 7,282,403 7,288,918 RGD:9068941
G Hoxd8 homeobox D8 JBrowse link NW_004955403 20,530,536 20,532,580 RGD:9068941
G Tbx3 T-box 3 JBrowse link NW_004955455 15,988,153 16,000,156 RGD:9068941
G Tbxt T-box transcription factor T JBrowse link NW_004955439 15,675,680 15,683,542 RGD:9068941
G Tdgf1 teratocarcinoma-derived growth factor 1 JBrowse link NW_004955420 25,476,975 25,479,969 RGD:9068941
G Wnt5a Wnt family member 5A JBrowse link NW_004955430 5,304,817 5,325,684 RGD:9068941
anterior/posterior pattern specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acvr2a activin A receptor type 2A JBrowse link NW_004955440 13,849,926 13,931,374 RGD:9068941
G Acvr2b activin A receptor type 2B JBrowse link NW_004955427 25,438,652 25,467,360 RGD:9068941
G Alx4 ALX homeobox 4 JBrowse link NW_004955422 3,278,615 3,290,799 RGD:9068941
G Arc activity regulated cytoskeleton associated protein JBrowse link NW_004955454 1,379,998 1,383,414 RGD:9068941
G Barx1 BARX homeobox 1 JBrowse link NW_004955515 4,230,713 4,234,189 RGD:9068941
G Bmpr2 bone morphogenetic protein receptor type 2 JBrowse link NW_004955457 12,235,780 12,315,680 RGD:9068941
G Bptf bromodomain PHD finger transcription factor JBrowse link NW_004955478 6,990,816 7,088,751 RGD:9068941
G Btg2 BTG anti-proliferation factor 2 JBrowse link NW_004955406 39,303,221 39,307,308 RGD:9068941
G Cdon cell adhesion associated, oncogene regulated JBrowse link NW_004955412 27,004,391 27,093,968 RGD:9068941
G Celsr1 cadherin EGF LAG seven-pass G-type receptor 1 JBrowse link NW_004955413 30,455,194 30,561,124 RGD:9068941
G Cer1 cerberus 1, DAN family BMP antagonist JBrowse link NW_004955434 17,738,281 17,740,823 RGD:9068941
G Crkl CRK like proto-oncogene, adaptor protein JBrowse link NW_004955442 19,358,202 19,388,552 RGD:9068941
G Emx2 empty spiracles homeobox 2 JBrowse link NW_004955431 22,192,446 22,199,141 RGD:9068941
G Gli2 GLI family zinc finger 2 JBrowse link NW_004955459 8,892,917 9,124,672 RGD:9068941
G Gli3 GLI family zinc finger 3 JBrowse link NW_004955460 1,528,457 1,805,584 RGD:9068941
G Grsf1 G-rich RNA sequence binding factor 1 JBrowse link NW_004955447 2,181,841 2,194,650 RGD:9068941
G Hhex hematopoietically expressed homeobox JBrowse link NW_004955425 737,506 742,775 RGD:9068941
G Hipk1 homeodomain interacting protein kinase 1 JBrowse link NW_004955435 17,201,866 17,257,371 RGD:9068941
G Hipk2 homeodomain interacting protein kinase 2 JBrowse link NW_004955494 3,365,826 3,554,735 RGD:9068941
G Hnf1b HNF1 homeobox B JBrowse link NW_004955451 320,283 371,420 RGD:9068941
G Hoxa10 homeobox A10 JBrowse link NW_004955410 28,864,785 28,874,454 RGD:9068941
G Hoxa11 homeobox A11 JBrowse link NW_004955410 28,875,780 28,879,643 RGD:9068941
G Hoxa2 homeobox A2 JBrowse link NW_004955410 28,794,878 28,798,231 RGD:9068941
G Hoxa3 homeobox A3 JBrowse link NW_004955410 28,801,918 28,846,605 RGD:9068941
G Hoxa4 homeobox A4 JBrowse link NW_004955410 28,822,814 28,827,294 RGD:9068941
G Hoxa5 homeobox A5 JBrowse link NW_004955410 28,835,795 28,838,244 RGD:9068941
G Hoxa6 homeobox A6 JBrowse link NW_004955410 28,839,924 28,844,328 RGD:9068941
G Hoxa7 homeobox A7 JBrowse link NW_004955410 28,848,029 28,851,069 RGD:9068941
G Hoxa9 homeobox A9 JBrowse link NW_004955410 28,856,661 28,861,803 RGD:9068941
G Hoxb1 homeobox B1 JBrowse link NW_004955451 12,707,560 12,708,950 RGD:9068941
G Hoxb2 homeobox B2 JBrowse link NW_004955451 12,693,764 12,697,825 RGD:9068941
G Hoxb3 homeobox B3 JBrowse link NW_004955451 12,651,229 12,690,941 RGD:9068941
G Hoxb4 homeobox B4 JBrowse link NW_004955451 12,661,290 12,665,576 RGD:9068941
G Hoxb5 homeobox B5 JBrowse link NW_004955451 12,637,229 12,650,261 RGD:9068941
G Hoxb6 homeobox B6 JBrowse link NW_004955451 12,637,221 12,645,749 RGD:9068941
G Hoxb7 homeobox B7 JBrowse link NW_004955451 12,630,276 12,634,641 RGD:9068941
G Hoxb9 homeobox B9 JBrowse link NW_004955451 12,616,465 12,616,926 RGD:9068941
G Hoxc10 homeobox C10 JBrowse link NW_004955458 1,243,529 1,248,653 RGD:9068941
G Hoxc11 homeobox C11 JBrowse link NW_004955458 1,231,625 1,234,785 RGD:9068941
G Hoxc13 homeobox C13 JBrowse link NW_004955458 1,197,295 1,205,098 RGD:9068941
G Hoxc4 homeobox C4 JBrowse link NW_004955458 1,251,601 1,313,291 RGD:9068941
G Hoxc5 homeobox C5 JBrowse link NW_004955458 1,288,411 1,293,095 RGD:9068941
G Hoxc6 homeobox C6 JBrowse link NW_004955458 1,284,351 1,288,391 RGD:9068941
G Hoxc8 homeobox C8 JBrowse link NW_004955458 1,267,247 1,271,354 RGD:9068941
G Hoxc9 homeobox C9 JBrowse link NW_004955458 1,258,364 1,261,510 RGD:9068941
G Hoxd10 homeobox D10 JBrowse link NW_004955403 20,543,224 20,548,801 RGD:9068941
G Hoxd13 homeobox D13 JBrowse link NW_004955403 20,568,314 20,575,579 RGD:9068941
G Hoxd3 homeobox D3 JBrowse link NW_004955403 20,489,663 20,496,021 RGD:9068941
G Hoxd4 homeobox D4 JBrowse link NW_004955403 20,510,364 20,526,564 RGD:9068941
G Hoxd9 homeobox D9 JBrowse link NW_004955451 12,619,722 12,621,320 RGD:9068941
G Kif3a kinesin family member 3A JBrowse link NW_004955408 4,072,823 4,115,975 RGD:9068941
G Lhx1 LIM homeobox 1 JBrowse link NW_004955451 1,037,936 1,048,501 RGD:9068941
G Lrp5 LDL receptor related protein 5 JBrowse link NW_004955422 17,394,371 17,475,244 RGD:9068941
G Lrp6 LDL receptor related protein 6 JBrowse link NW_004955413 9,080,901 9,237,644 RGD:9068941
G Mllt3 MLLT3 super elongation complex subunit JBrowse link NW_004955434 22,594,681 22,873,826 RGD:9068941
G Msx1 msh homeobox 1 JBrowse link NW_004955514 4,923,552 4,927,471 RGD:9068941
G Msx2 msh homeobox 2 JBrowse link NW_004955408 27,323,405 27,329,484 RGD:9068941
G Neurod1 neuronal differentiation 1 JBrowse link NW_004955403 15,595,888 15,600,040 RGD:9068941
G Nr2f2 nuclear receptor subfamily 2 group F member 2 JBrowse link NW_004955416 24,148,052 24,154,406 RGD:9068941
G Otx1 orthodenticle homeobox 1 JBrowse link NW_004955424 21,140,038 21,147,268 RGD:9068941
G Pbx1 PBX homeobox 1 JBrowse link NW_004955462 11,777,168 12,083,068 RGD:9068941
G Pcgf2 polycomb group ring finger 2 JBrowse link NW_004955451 13,817,559 13,822,342 RGD:9068941
G Pcsk5 proprotein convertase subtilisin/kexin type 5 JBrowse link NW_004955512 2,914,834 3,333,440 RGD:9068941
G Rarg retinoic acid receptor gamma JBrowse link NW_004955458 480,257 501,172 RGD:9068941
G Ring1 ring finger protein 1 JBrowse link NW_004955437 1,782,156 1,785,811 RGD:9068941
G Scmh1 Scm polycomb group protein homolog 1 JBrowse link NW_004955537 819,209 971,297 RGD:9068941
G Smad2 SMAD family member 2 JBrowse link NW_004955402 33,131,760 33,217,144 RGD:9068941
G Smo smoothened, frizzled class receptor JBrowse link NW_004955479 9,963,377 9,991,670 RGD:9068941
G Tbx1 T-box 1 JBrowse link NW_004955442 18,320,674 18,327,062 RGD:9068941
G Tdgf1 teratocarcinoma-derived growth factor 1 JBrowse link NW_004955420 25,476,975 25,479,969 RGD:9068941
G Tgfbr1 transforming growth factor beta receptor 1 JBrowse link NW_004955419 26,490,899 26,546,349 RGD:9068941
G Tshz1 teashirt zinc finger homeobox 1 JBrowse link NW_004955402 58,695,150 58,717,926 RGD:9068941
G Tulp3 TUB like protein 3 JBrowse link NW_004955429 18,424,912 18,484,522 RGD:9068941
G Vangl2 VANGL planar cell polarity protein 2 JBrowse link NW_004955468 12,162,084 12,189,322 RGD:9068941
G Yy1 YY1 transcription factor JBrowse link NW_004955438 21,341,374 21,377,674 RGD:9068941
G Zbtb16 zinc finger and BTB domain containing 16 JBrowse link NW_004955412 15,668,332 15,845,384 RGD:9068941
G Zic3 Zic family member 3 JBrowse link NW_004955489 7,560,684 7,571,739 RGD:9068941
axis elongation involved in somitogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lrp6 LDL receptor related protein 6 JBrowse link NW_004955413 9,080,901 9,237,644 RGD:9068941
G Med12 mediator complex subunit 12 JBrowse link NW_004955475 10,687,168 10,710,286 RGD:9068941
G Wnt3a Wnt family member 3A JBrowse link NW_004955581 351,375 382,541 RGD:9068941
axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Wnt6 Wnt family member 6 JBrowse link NW_004955453 14,547,427 14,560,001 RGD:9068941
BMP signaling pathway involved in heart induction term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp2 bone morphogenetic protein 2 JBrowse link NW_004955415 17,048,374 17,058,172 RGD:9068941
G Bmp4 bone morphogenetic protein 4 JBrowse link NW_004955409 9,432,835 9,439,680 RGD:9068941
G Pou5f1 POU class 5 homeobox 1 JBrowse link NW_004955583 995,707 1,003,202 RGD:9068941
BMP signaling pathway involved in renal system segmentation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp4 bone morphogenetic protein 4 JBrowse link NW_004955409 9,432,835 9,439,680 RGD:9068941
BMP signaling pathway involved in spinal cord dorsal/ventral patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chrd chordin JBrowse link NW_004955420 23,111,690 23,120,038 RGD:9068941
brain segmentation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Egr2 early growth response 2 JBrowse link NW_004955425 16,055,748 16,068,429 RGD:9068941
G Hoxa2 homeobox A2 JBrowse link NW_004955410 28,794,878 28,798,231 RGD:9068941
G Mafb MAF bZIP transcription factor B JBrowse link NW_004955445 16,219,675 16,222,913 RGD:9068941
cerebral cortex regionalization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adgrg1 adhesion G protein-coupled receptor G1 JBrowse link NW_004955433 15,253,196 15,288,982 RGD:9068941
G Dmrta2 DMRT like family A2 JBrowse link NW_004955464 8,493,392 8,498,007 RGD:9068941
G Emx1 empty spiracles homeobox 1 JBrowse link NW_004955424 12,666,280 12,683,023 RGD:9068941
G Emx2 empty spiracles homeobox 2 JBrowse link NW_004955431 22,192,446 22,199,141 RGD:9068941
G Eomes eomesodermin JBrowse link NW_004955430 19,280,460 19,287,060 RGD:9068941
G Pax6 paired box 6 JBrowse link NW_004955476 10,058,979 10,074,668 RGD:9068941
G Tra2b transformer 2 beta homolog JBrowse link NW_004955420 21,707,618 21,728,186 RGD:9068941
compartment pattern specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dll1 delta like canonical Notch ligand 1 JBrowse link NW_004955411 3,478,943 3,486,541 RGD:9068941
G Dll3 delta like canonical Notch ligand 3 JBrowse link NW_004955468 70,714 78,831 RGD:9068941
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase JBrowse link NW_004955460 12,773,975 12,784,512 RGD:9068941
G Notch1 notch receptor 1 JBrowse link NW_004955513 4,225,939 4,264,875 RGD:9068941
convergent extension involved in somitogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sfrp1 secreted frizzled related protein 1 JBrowse link NW_004955536 1,663,721 1,702,678 RGD:9068941
detection of nodal flow term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pkd1l1 polycystin 1 like 1, transient receptor potential channel interacting JBrowse link NW_004955456 5,497,126 5,582,342 RGD:9068941
G Pkd2 polycystin 2, transient receptor potential cation channel JBrowse link NW_004955474 1,831,221 1,868,170 RGD:9068941
determination of bilateral symmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aldh1a2 aldehyde dehydrogenase 1 family member A2 JBrowse link NW_004955450 16,406,578 16,453,048 RGD:9068941
determination of digestive tract left/right asymmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccdc103 coiled-coil domain containing 103 JBrowse link NW_004955451 17,690,148 17,693,285 RGD:9068941
G Ccdc39 coiled-coil domain containing 39 JBrowse link NW_004955420 9,689,076 9,727,806 RGD:9068941
G Ccdc40 coiled-coil domain containing 40 JBrowse link NW_004955506 2,783,837 2,840,248 RGD:9068941
G Dnaaf1 dynein axonemal assembly factor 1 JBrowse link NW_004955564 132,497 149,399 RGD:9068941
G Megf8 multiple EGF like domains 8 JBrowse link NW_004955555 549,921 591,978 RGD:9068941
G Zic3 Zic family member 3 JBrowse link NW_004955489 7,560,684 7,571,739 RGD:9068941
determination of dorsal identity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cer1 cerberus 1, DAN family BMP antagonist JBrowse link NW_004955434 17,738,281 17,740,823 RGD:9068941
G Grem1 gremlin 1, DAN family BMP antagonist JBrowse link NW_004955416 1,812,725 1,825,528 RGD:9068941
G Grem2 gremlin 2, DAN family BMP antagonist JBrowse link NW_004955406 11,245,960 11,343,677 RGD:9068941
G Nbl1 NBL1, DAN family BMP antagonist JBrowse link NW_004955452 316,867 319,883 RGD:9068941
G Wnt8b Wnt family member 8B JBrowse link NW_004955485 9,658,432 9,679,371 RGD:9068941
determination of heart left/right asymmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cer1 cerberus 1, DAN family BMP antagonist JBrowse link NW_004955434 17,738,281 17,740,823 RGD:9068941
G Dand5 DAN domain BMP antagonist family member 5 JBrowse link NW_004955415 32,012,637 32,015,965 RGD:9068941
G Dnah11 dynein axonemal heavy chain 11 JBrowse link NW_004955410 24,045,333 24,352,626 RGD:9068941
G Megf8 multiple EGF like domains 8 JBrowse link NW_004955555 549,921 591,978 RGD:9068941
G Mmp21 matrix metallopeptidase 21 JBrowse link NW_004955477 3,650,874 3,658,059 RGD:9068941
G Tbxt T-box transcription factor T JBrowse link NW_004955439 15,675,680 15,683,542 RGD:9068941
determination of intestine left/right asymmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nphp3 nephrocystin 3 JBrowse link NW_004955501 5,799,879 5,837,022 RGD:9068941
determination of left/right asymmetry in lateral mesoderm term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dand5 DAN domain BMP antagonist family member 5 JBrowse link NW_004955415 32,012,637 32,015,965 RGD:9068941
G Shh sonic hedgehog signaling molecule JBrowse link NW_004955491 8,647,133 8,657,381 RGD:9068941
G Smo smoothened, frizzled class receptor JBrowse link NW_004955479 9,963,377 9,991,670 RGD:9068941
determination of left/right asymmetry in nervous system term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnah11 dynein axonemal heavy chain 11 JBrowse link NW_004955410 24,045,333 24,352,626 RGD:9068941
G Zic3 Zic family member 3 JBrowse link NW_004955489 7,560,684 7,571,739 RGD:9068941
determination of left/right symmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acvr1 activin A receptor type 1 JBrowse link NW_004955449 15,587,958 15,706,432 RGD:9068941
G Acvr2a activin A receptor type 2A JBrowse link NW_004955440 13,849,926 13,931,374 RGD:9068941
G Acvr2b activin A receptor type 2B JBrowse link NW_004955427 25,438,652 25,467,360 RGD:9068941
G Alg5 ALG5 dolichyl-phosphate beta-glucosyltransferase JBrowse link NW_004955431 9,059,074 9,097,597 RGD:9068941
G Ap1b1 adaptor related protein complex 1 subunit beta 1 JBrowse link NW_004955455 3,632,053 3,686,007 RGD:9068941
G Arl6 ADP ribosylation factor like GTPase 6 JBrowse link NW_004955407 360,898 387,563 RGD:9068941
G Armc4 armadillo repeat containing 4 JBrowse link NW_004955462 1,709,493 1,885,094 RGD:9068941
G Bbs7 Bardet-Biedl syndrome 7 JBrowse link NW_004955428 18,682,072 18,724,560 RGD:9068941
G Bicc1 BicC family RNA binding protein 1 JBrowse link NW_004955425 12,237,611 12,522,321 RGD:9068941
G Cc2d2a coiled-coil and C2 domain containing 2A JBrowse link NW_004955480 8,404,239 8,514,792 RGD:9068941
G Ccdc151 coiled-coil domain containing 151 JBrowse link NW_004955495 2,318,840 2,330,966 RGD:9068941
G Ccdc39 coiled-coil domain containing 39 JBrowse link NW_004955420 9,689,076 9,727,806 RGD:9068941
G Cfap53 cilia and flagella associated protein 53 JBrowse link NW_004955402 35,295,007 35,318,800 RGD:9068941
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 JBrowse link NW_004955436 20,370,950 20,372,677 RGD:9068941
G Daam2 dishevelled associated activator of morphogenesis 2 JBrowse link NW_004955437 6,728,703 6,839,903 RGD:9068941
G Disp1 dispatched RND transporter family member 1 JBrowse link NW_004955520 1,591,831 1,711,871 RGD:9068941
G Dll1 delta like canonical Notch ligand 1 JBrowse link NW_004955411 3,478,943 3,486,541 RGD:9068941
G Dnaaf4 dynein axonemal assembly factor 4 JBrowse link NW_004955409 498,450 523,067 RGD:9068941
G Dnah11 dynein axonemal heavy chain 11 JBrowse link NW_004955410 24,045,333 24,352,626 RGD:9068941
G Dnah5 dynein axonemal heavy chain 5 JBrowse link NW_004955426 3,105,631 3,406,587 RGD:9068941
G Dnai1 dynein axonemal intermediate chain 1 JBrowse link NW_004955472 1,599,265 1,668,214 RGD:9068941
G Dnai2 dynein axonemal intermediate chain 2 JBrowse link NW_004955553 1,188,279 1,212,053 RGD:9068941
G Dpcd deleted in primary ciliary dyskinesia homolog (mouse) JBrowse link NW_004955485 8,670,261 8,691,545 RGD:9068941
G Drc1 dynein regulatory complex subunit 1 JBrowse link NW_004955469 8,416,934 8,479,961 RGD:9068941
G Dync2h1 dynein cytoplasmic 2 heavy chain 1 JBrowse link NW_004955412 6,267,726 6,518,888 RGD:9068941
G Dync2li1 dynein cytoplasmic 2 light intermediate chain 1 JBrowse link NW_004955441 10,928,577 10,961,194 RGD:9068941
G Fgf10 fibroblast growth factor 10 JBrowse link NW_004955446 18,163,117 18,244,840 RGD:9068941
G Foxf1 forkhead box F1 JBrowse link NW_004955541 1,341,715 1,345,397 RGD:9068941
G Foxj1 forkhead box J1 JBrowse link NW_004955506 6,127,551 6,132,302 RGD:9068941
G Galnt11 polypeptide N-acetylgalactosaminyltransferase 11 JBrowse link NW_004955491 6,218,589 6,239,416 RGD:9068941
G Gas8 growth arrest specific 8 JBrowse link NW_004955541 3,477,067 3,494,991 RGD:9068941
G Ift140 intraflagellar transport 140 JBrowse link NW_004955442 15,625,429 15,719,006 RGD:9068941
G Ift74 intraflagellar transport 74 JBrowse link NW_004955472 7,779,705 7,872,423 RGD:9068941
G Kif3b kinesin family member 3B JBrowse link NW_004955422 28,738,567 28,779,584 RGD:9068941
G LOC102027889 chromosome unknown open reading frame, human C9orf116 JBrowse link NW_004955513 4,047,764 4,055,692 RGD:9068941
G Mkks McKusick-Kaufman syndrome JBrowse link NW_004955415 20,292,311 20,315,850 RGD:9068941
G Mks1 MKS transition zone complex subunit 1 JBrowse link NW_004955451 4,805,542 4,818,233 RGD:9068941
G Mmp21 matrix metallopeptidase 21 JBrowse link NW_004955477 3,650,874 3,658,059 RGD:9068941
G Nek8 NIMA related kinase 8 JBrowse link NW_004955481 4,417,773 4,427,885 RGD:9068941
G Nkx3-2 NK3 homeobox 2 JBrowse link NW_004955480 10,212,929 10,215,814 RGD:9068941
G Notch1 notch receptor 1 JBrowse link NW_004955513 4,225,939 4,264,875 RGD:9068941
G Nphp3 nephrocystin 3 JBrowse link NW_004955501 5,799,879 5,837,022 RGD:9068941
G Pcsk5 proprotein convertase subtilisin/kexin type 5 JBrowse link NW_004955512 2,914,834 3,333,440 RGD:9068941
G Pcsk6 proprotein convertase subtilisin/kexin type 6 JBrowse link NW_004955416 28,184,768 28,314,697 RGD:9068941
G Pitx2 paired like homeodomain 2 JBrowse link NW_004955457 15,803,493 15,823,193 RGD:9068941
G Pkd2 polycystin 2, transient receptor potential cation channel JBrowse link NW_004955474 1,831,221 1,868,170 RGD:9068941
G Pskh1 protein serine kinase H1 JBrowse link NW_004955484 8,784,128 8,813,669 RGD:9068941
G Ripply2 ripply transcriptional repressor 2 JBrowse link NW_004955411 11,418,744 11,422,766 RGD:9068941
G Rpgrip1l RPGRIP1 like JBrowse link NW_004955433 11,321,504 11,423,981 RGD:9068941
G Rttn rotatin JBrowse link NW_004955402 53,600,985 53,753,218 RGD:9068941
G Stil STIL centriolar assembly protein JBrowse link NW_004955464 11,213,265 11,288,648 RGD:9068941
G Tbc1d32 TBC1 domain family member 32 JBrowse link NW_004955436 3,385,216 3,542,497 RGD:9068941
G Tbx1 T-box 1 JBrowse link NW_004955442 18,320,674 18,327,062 RGD:9068941
G Tdgf1 teratocarcinoma-derived growth factor 1 JBrowse link NW_004955420 25,476,975 25,479,969 RGD:9068941
G Zic3 Zic family member 3 JBrowse link NW_004955489 7,560,684 7,571,739 RGD:9068941
determination of liver left/right asymmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccdc39 coiled-coil domain containing 39 JBrowse link NW_004955420 9,689,076 9,727,806 RGD:9068941
G Ccdc40 coiled-coil domain containing 40 JBrowse link NW_004955506 2,783,837 2,840,248 RGD:9068941
G Dnaaf1 dynein axonemal assembly factor 1 JBrowse link NW_004955564 132,497 149,399 RGD:9068941
G Nphp3 nephrocystin 3 JBrowse link NW_004955501 5,799,879 5,837,022 RGD:9068941
G Pkd2 polycystin 2, transient receptor potential cation channel JBrowse link NW_004955474 1,831,221 1,868,170 RGD:9068941
G Zic3 Zic family member 3 JBrowse link NW_004955489 7,560,684 7,571,739 RGD:9068941
determination of pancreatic left/right asymmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccdc39 coiled-coil domain containing 39 JBrowse link NW_004955420 9,689,076 9,727,806 RGD:9068941
G Ccdc40 coiled-coil domain containing 40 JBrowse link NW_004955506 2,783,837 2,840,248 RGD:9068941
G Dnaaf1 dynein axonemal assembly factor 1 JBrowse link NW_004955564 132,497 149,399 RGD:9068941
G Nphp3 nephrocystin 3 JBrowse link NW_004955501 5,799,879 5,837,022 RGD:9068941
G Zic3 Zic family member 3 JBrowse link NW_004955489 7,560,684 7,571,739 RGD:9068941
determination of stomach left/right asymmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nphp3 nephrocystin 3 JBrowse link NW_004955501 5,799,879 5,837,022 RGD:9068941
determination of ventral identity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aida axin interactor, dorsalization associated JBrowse link NW_004955520 1,819,617 1,851,273 RGD:9068941
dorsal/ventral axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmpr1a bone morphogenetic protein receptor type 1A JBrowse link NW_004955510 5,812,571 5,936,312 RGD:9068941
G Ctnnb1 catenin beta 1 JBrowse link NW_004955420 29,030,716 29,047,447 RGD:9068941
G Mdfi MyoD family inhibitor JBrowse link NW_004955437 8,071,054 8,081,811 RGD:9068941
G Pax6 paired box 6 JBrowse link NW_004955476 10,058,979 10,074,668 RGD:9068941
G Senp2 SUMO specific peptidase 2 JBrowse link NW_004955420 21,969,537 22,005,094 RGD:9068941
G Sfrp1 secreted frizzled related protein 1 JBrowse link NW_004955536 1,663,721 1,702,678 RGD:9068941
G Vax2 ventral anterior homeobox 2 JBrowse link NW_004955424 14,283,336 14,309,809 RGD:9068941
dorsal/ventral neural tube patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp4 bone morphogenetic protein 4 JBrowse link NW_004955409 9,432,835 9,439,680 RGD:9068941
G Fkbp8 FKBP prolyl isomerase 8 JBrowse link NW_004955524 3,037,825 3,044,296 RGD:9068941
G Foxa1 forkhead box A1 JBrowse link NW_004955409 23,598,127 23,599,827 RGD:9068941
G Gsc goosecoid homeobox JBrowse link NW_004955438 17,653,149 17,655,091 RGD:9068941
G Kif3a kinesin family member 3A JBrowse link NW_004955408 4,072,823 4,115,975 RGD:9068941
G Pax7 paired box 7 JBrowse link NW_004955527 474,450 573,869 RGD:9068941
G Psen1 presenilin 1 JBrowse link NW_004955523 2,128,529 2,210,737 RGD:9068941
G Shh sonic hedgehog signaling molecule JBrowse link NW_004955491 8,647,133 8,657,381 RGD:9068941
G Smo smoothened, frizzled class receptor JBrowse link NW_004955479 9,963,377 9,991,670 RGD:9068941
G Tctn1 tectonic family member 1 JBrowse link NW_004955482 7,504,554 7,533,605 RGD:9068941
G Wnt3a Wnt family member 3A JBrowse link NW_004955581 351,375 382,541 RGD:9068941
dorsal/ventral pattern formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aida axin interactor, dorsalization associated JBrowse link NW_004955520 1,819,617 1,851,273 RGD:9068941
G Arl13b ADP ribosylation factor like GTPase 13B JBrowse link NW_004955407 3,402,214 3,477,839 RGD:9068941
G Bmpr1b bone morphogenetic protein receptor type 1B JBrowse link NW_004955405 5,408,171 5,784,930 RGD:9068941
G Disp1 dispatched RND transporter family member 1 JBrowse link NW_004955520 1,591,831 1,711,871 RGD:9068941
G Dscaml1 DS cell adhesion molecule like 1 JBrowse link NW_004955412 18,708,444 19,022,538 RGD:9068941
G Dync2h1 dynein cytoplasmic 2 heavy chain 1 JBrowse link NW_004955412 6,267,726 6,518,888 RGD:9068941
G Edn1 endothelin 1 JBrowse link NW_004955465 2,287,906 2,314,945 RGD:9068941
G En1 engrailed homeobox 1 JBrowse link NW_004955459 10,839,581 10,844,198 RGD:9068941
G Fbxl15 F-box and leucine rich repeat protein 15 JBrowse link NW_004955485 7,977,222 7,979,246 RGD:9068941
G Foxg1 forkhead box G1 JBrowse link NW_004955409 31,672,960 31,674,970 RGD:9068941
G Gli1 GLI family zinc finger 1 JBrowse link NW_004955458 5,181,761 5,193,500 RGD:9068941
G Gli3 GLI family zinc finger 3 JBrowse link NW_004955460 1,528,457 1,805,584 RGD:9068941
G Hhip hedgehog interacting protein JBrowse link NW_004955428 657,918 745,255 RGD:9068941
G Hoxa11 homeobox A11 JBrowse link NW_004955410 28,875,780 28,879,643 RGD:9068941
G Hoxa2 homeobox A2 JBrowse link NW_004955410 28,794,878 28,798,231 RGD:9068941
G Hoxb2 homeobox B2 JBrowse link NW_004955451 12,693,764 12,697,825 RGD:9068941
G Hoxd11 homeobox D11 JBrowse link NW_004955403 20,541,870 20,556,574 RGD:9068941
G Ift172 intraflagellar transport 172 JBrowse link NW_004955469 9,418,599 9,455,026 RGD:9068941
G Ift52 intraflagellar transport 52 JBrowse link NW_004955445 13,542,726 13,580,204 RGD:9068941
G Lhx1 LIM homeobox 1 JBrowse link NW_004955451 1,037,936 1,048,501 RGD:9068941
G Lhx2 LIM homeobox 2 JBrowse link NW_004955419 3,999,364 4,019,543 RGD:9068941
G Lmx1b LIM homeobox transcription factor 1 beta JBrowse link NW_004955419 1,782,566 1,857,375 RGD:9068941
G Lrp4 LDL receptor related protein 4 JBrowse link NW_004955422 1,191,338 1,238,227 RGD:9068941
G Nog noggin JBrowse link NW_004955451 6,192,368 6,193,766 RGD:9068941
G Noto notochord homeobox JBrowse link NW_004955424 12,424,984 12,431,562 RGD:9068941
G Ovol2 ovo like zinc finger 2 JBrowse link NW_004955415 26,825,284 26,843,438 RGD:9068941
G Ptch1 patched 1 JBrowse link NW_004955422 22,362,330 22,418,062 RGD:9068941
G Shh sonic hedgehog signaling molecule JBrowse link NW_004955491 8,647,133 8,657,381 RGD:9068941
G Sp8 Sp8 transcription factor JBrowse link NW_004955410 23,401,888 23,404,654 RGD:9068941
G Tbx20 T-box 20 JBrowse link NW_004955460 7,794,313 7,856,906 RGD:9068941
G Wnt7a Wnt family member 7A JBrowse link NW_004955429 12,647,993 12,693,998 RGD:9068941
embryonic axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cited1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 JBrowse link NW_004955475 11,722,514 11,725,067 RGD:9068941
G Ctnnb1 catenin beta 1 JBrowse link NW_004955420 29,030,716 29,047,447 RGD:9068941
G Fzd5 frizzled class receptor 5 JBrowse link NW_004955457 7,282,403 7,288,918 RGD:9068941
G Stil STIL centriolar assembly protein JBrowse link NW_004955464 11,213,265 11,288,648 RGD:9068941
G Wnt1 Wnt family member 1 JBrowse link NW_004955500 7,797,063 7,811,142 RGD:9068941
G Wnt7a Wnt family member 7A JBrowse link NW_004955429 12,647,993 12,693,998 RGD:9068941
embryonic heart tube anterior/posterior pattern specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp2 bone morphogenetic protein 2 JBrowse link NW_004955415 17,048,374 17,058,172 RGD:9068941
G Foxh1 forkhead box H1 JBrowse link NW_004955454 3,094,015 3,096,060 RGD:9068941
G Gata4 GATA binding protein 4 JBrowse link NW_004955403 52,958,318 53,029,267 RGD:9068941
embryonic heart tube left/right pattern formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 JBrowse link NW_004955436 20,370,950 20,372,677 RGD:9068941
G Ift122 intraflagellar transport 122 JBrowse link NW_004955429 17,795,757 17,858,609 RGD:9068941
G Megf8 multiple EGF like domains 8 JBrowse link NW_004955555 549,921 591,978 RGD:9068941
G Nkx2-5 NK2 homeobox 5 JBrowse link NW_004955408 25,833,649 25,836,673 RGD:9068941
embryonic pattern specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp7 bone morphogenetic protein 7 JBrowse link NW_004955445 2,154,057 2,235,594 RGD:9068941
G Disp1 dispatched RND transporter family member 1 JBrowse link NW_004955520 1,591,831 1,711,871 RGD:9068941
G Efnb1 ephrin B1 JBrowse link NW_004955475 8,360,504 8,372,431 RGD:9068941
G Erbb4 erb-b2 receptor tyrosine kinase 4 JBrowse link NW_004955457 3,177,905 4,236,152 RGD:9068941
G Fgf10 fibroblast growth factor 10 JBrowse link NW_004955446 18,163,117 18,244,840 RGD:9068941
G Fgfr2 fibroblast growth factor receptor 2 JBrowse link NW_004955551 2,321,190 2,427,000 RGD:9068941
G Ihh Indian hedgehog signaling molecule JBrowse link NW_004955453 14,376,665 14,382,536 RGD:9068941
G Lhx1 LIM homeobox 1 JBrowse link NW_004955451 1,037,936 1,048,501 RGD:9068941
G Lrp6 LDL receptor related protein 6 JBrowse link NW_004955413 9,080,901 9,237,644 RGD:9068941
G Nodal nodal growth differentiation factor JBrowse link NW_004955437 20,828,448 20,835,486 RGD:9068941
G Noto notochord homeobox JBrowse link NW_004955424 12,424,984 12,431,562 RGD:9068941
G Pgap1 post-GPI attachment to proteins 1 JBrowse link NW_004955403 3,527,398 3,582,004 RGD:9068941
G Ripply1 ripply transcriptional repressor 1 JBrowse link NW_004955490 9,167,071 9,172,101 RGD:9068941
G Ripply2 ripply transcriptional repressor 2 JBrowse link NW_004955411 11,418,744 11,422,766 RGD:9068941
G Ripply3 ripply transcriptional repressor 3 JBrowse link NW_004955407 36,101,206 36,108,808 RGD:9068941
G Satb2 SATB homeobox 2 JBrowse link NW_004955403 1,663,676 1,811,088 RGD:9068941
G Shh sonic hedgehog signaling molecule JBrowse link NW_004955491 8,647,133 8,657,381 RGD:9068941
G Sim2 SIM bHLH transcription factor 2 JBrowse link NW_004955407 35,828,250 35,869,067 RGD:9068941
G Smad1 SMAD family member 1 JBrowse link NW_004955428 1,357,398 1,429,521 RGD:9068941
G Smad3 SMAD family member 3 JBrowse link NW_004955450 8,747,651 8,842,003 RGD:9068941
G Smad5 SMAD family member 5 JBrowse link NW_004955408 31,183,727 31,228,355 RGD:9068941
G Zbtb16 zinc finger and BTB domain containing 16 JBrowse link NW_004955412 15,668,332 15,845,384 RGD:9068941
epiblast cell-extraembryonic ectoderm cell signaling involved in anterior/posterior axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nodal nodal growth differentiation factor JBrowse link NW_004955437 20,828,448 20,835,486 RGD:9068941
epithelial cilium movement involved in determination of left/right asymmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccdc103 coiled-coil domain containing 103 JBrowse link NW_004955451 17,690,148 17,693,285 RGD:9068941
G Ccdc39 coiled-coil domain containing 39 JBrowse link NW_004955420 9,689,076 9,727,806 RGD:9068941
G Ccdc40 coiled-coil domain containing 40 JBrowse link NW_004955506 2,783,837 2,840,248 RGD:9068941
G Cfap53 cilia and flagella associated protein 53 JBrowse link NW_004955402 35,295,007 35,318,800 RGD:9068941
G Dnaaf1 dynein axonemal assembly factor 1 JBrowse link NW_004955564 132,497 149,399 RGD:9068941
G Dnah11 dynein axonemal heavy chain 11 JBrowse link NW_004955410 24,045,333 24,352,626 RGD:9068941
G Lrrc6 leucine rich repeat containing 6 JBrowse link NW_004955461 7,204,165 7,311,524 RGD:9068941
G Nphp3 nephrocystin 3 JBrowse link NW_004955501 5,799,879 5,837,022 RGD:9068941
G Ofd1 OFD1 centriole and centriolar satellite protein JBrowse link NW_004955519 4,433,747 4,470,842 RGD:9068941
G Rfx3 regulatory factor X3 JBrowse link NW_004955434 7,635,363 7,910,056 RGD:9068941
establishment of anatomical structure orientation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ttc8 tetratricopeptide repeat domain 8 JBrowse link NW_004955438 11,410,196 11,466,044 RGD:9068941
establishment of animal organ orientation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Irx4 iroquois homeobox 4 JBrowse link NW_004955504 937,152 940,842 RGD:9068941
G Wnt8a Wnt family member 8A JBrowse link NW_004955418 2,332,636 2,338,099 RGD:9068941
fibroblast growth factor receptor signaling pathway involved in mammary gland specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fgf10 fibroblast growth factor 10 JBrowse link NW_004955446 18,163,117 18,244,840 RGD:9068941
G Fgfr2 fibroblast growth factor receptor 2 JBrowse link NW_004955551 2,321,190 2,427,000 RGD:9068941
fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nog noggin JBrowse link NW_004955451 6,192,368 6,193,766 RGD:9068941
forebrain anterior/posterior pattern specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fezf1 FEZ family zinc finger 1 JBrowse link NW_004955479 3,945,358 3,953,924 RGD:9068941
G Fezf2 FEZ family zinc finger 2 JBrowse link NW_004955517 3,439,999 3,443,477 RGD:9068941
G Six3 SIX homeobox 3 JBrowse link NW_004955441 11,966,389 11,978,545 RGD:9068941
G Wnt1 Wnt family member 1 JBrowse link NW_004955500 7,797,063 7,811,142 RGD:9068941
forebrain dorsal/ventral pattern formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fgf8 fibroblast growth factor 8 JBrowse link NW_004955485 8,517,412 8,521,732 RGD:9068941
G Gli3 GLI family zinc finger 3 JBrowse link NW_004955460 1,528,457 1,805,584 RGD:9068941
G Gsx2 GS homeobox 2 JBrowse link NW_004955447 16,714,870 16,715,757 RGD:9068941
G Nkx2-1 NK2 homeobox 1 JBrowse link NW_004955409 24,612,490 24,616,360 RGD:9068941
G Pax6 paired box 6 JBrowse link NW_004955476 10,058,979 10,074,668 RGD:9068941
G Six3 SIX homeobox 3 JBrowse link NW_004955441 11,966,389 11,978,545 RGD:9068941
G Ttc21b tetratricopeptide repeat domain 21B JBrowse link NW_004955449 8,242,327 8,306,012 RGD:9068941
forebrain regionalization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lhx1 LIM homeobox 1 JBrowse link NW_004955451 1,037,936 1,048,501 RGD:9068941
G Pgap1 post-GPI attachment to proteins 1 JBrowse link NW_004955403 3,527,398 3,582,004 RGD:9068941
G Wnt2b Wnt family member 2B JBrowse link NW_004955435 15,948,262 15,962,958 RGD:9068941
G Wnt7b Wnt family member 7B JBrowse link NW_004955413 30,146,185 30,185,693 RGD:9068941
forebrain-midbrain boundary formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pax6 paired box 6 JBrowse link NW_004955476 10,058,979 10,074,668 RGD:9068941
growth plate cartilage axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Stc1 stanniocalcin 1 JBrowse link NW_004955403 46,969,837 46,982,075 RGD:9068941
heart looping term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ahi1 Abelson helper integration site 1 JBrowse link NW_004955439 1,277,185 1,460,296 RGD:9068941
G Arl13b ADP ribosylation factor like GTPase 13B JBrowse link NW_004955407 3,402,214 3,477,839 RGD:9068941
G Bbs4 Bardet-Biedl syndrome 4 JBrowse link NW_004955450 4,624,634 4,668,470 RGD:9068941
G Bbs5 Bardet-Biedl syndrome 5 JBrowse link NW_004955449 5,043,034 5,061,806 RGD:9068941
G Bbs7 Bardet-Biedl syndrome 7 JBrowse link NW_004955428 18,682,072 18,724,560 RGD:9068941
G C2cd3 C2 calcium dependent domain containing 3 JBrowse link NW_004955414 17,444,299 17,557,912 RGD:9068941
G Ccdc103 coiled-coil domain containing 103 JBrowse link NW_004955451 17,690,148 17,693,285 RGD:9068941
G Ccdc39 coiled-coil domain containing 39 JBrowse link NW_004955420 9,689,076 9,727,806 RGD:9068941
G Ccdc40 coiled-coil domain containing 40 JBrowse link NW_004955506 2,783,837 2,840,248 RGD:9068941
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 JBrowse link NW_004955436 20,370,950 20,372,677 RGD:9068941
G Dll1 delta like canonical Notch ligand 1 JBrowse link NW_004955411 3,478,943 3,486,541 RGD:9068941
G Dnaaf1 dynein axonemal assembly factor 1 JBrowse link NW_004955564 132,497 149,399 RGD:9068941
G Eng endoglin JBrowse link NW_004955419 818,797 853,319 RGD:9068941
G Fgf8 fibroblast growth factor 8 JBrowse link NW_004955485 8,517,412 8,521,732 RGD:9068941
G Folr1 folate receptor alpha JBrowse link NW_004955414 19,188,830 19,197,728 RGD:9068941
G Foxh1 forkhead box H1 JBrowse link NW_004955454 3,094,015 3,096,060 RGD:9068941
G Foxn4 forkhead box N4 JBrowse link NW_004955455 9,182,405 9,210,365 RGD:9068941
G Gata4 GATA binding protein 4 JBrowse link NW_004955403 52,958,318 53,029,267 RGD:9068941
G Gja1 gap junction protein alpha 1 JBrowse link NW_004955436 3,612,533 3,618,095 RGD:9068941
G Hand1 heart and neural crest derivatives expressed 1 JBrowse link NW_004955408 8,848,723 8,851,804 RGD:9068941
G Hand2 heart and neural crest derivatives expressed 2 JBrowse link NW_004955403 33,478,034 33,481,613 RGD:9068941
G Hif1a hypoxia inducible factor 1 subunit alpha JBrowse link NW_004955466 8,000,311 8,022,497 RGD:9068941
G Ift172 intraflagellar transport 172 JBrowse link NW_004955469 9,418,599 9,455,026 RGD:9068941
G Ift52 intraflagellar transport 52 JBrowse link NW_004955445 13,542,726 13,580,204 RGD:9068941
G Ift57 intraflagellar transport 57 JBrowse link NW_004955427 8,814,298 8,871,671 RGD:9068941
G Ihh Indian hedgehog signaling molecule JBrowse link NW_004955453 14,376,665 14,382,536 RGD:9068941
G Kif3a kinesin family member 3A JBrowse link NW_004955408 4,072,823 4,115,975 RGD:9068941
G Lbx1 ladybird homeobox 1 JBrowse link NW_004955485 9,003,329 9,005,987 RGD:9068941
G Mef2c myocyte enhancer factor 2C JBrowse link NW_004955418 22,537,388 22,701,434 RGD:9068941
G Mib1 mindbomb E3 ubiquitin protein ligase 1 JBrowse link NW_004955402 10,392,308 10,502,576 RGD:9068941
G Mical2 microtubule associated monooxygenase, calponin and LIM domain containing 2 JBrowse link NW_004955414 27,600,823 27,804,232 RGD:9068941
G Mkks McKusick-Kaufman syndrome JBrowse link NW_004955415 20,292,311 20,315,850 RGD:9068941
G Ndrg4 NDRG family member 4 JBrowse link NW_004955433 15,914,884 15,933,000 RGD:9068941
G Nkx2-5 NK2 homeobox 5 JBrowse link NW_004955408 25,833,649 25,836,673 RGD:9068941
G Nodal nodal growth differentiation factor JBrowse link NW_004955437 20,828,448 20,835,486 RGD:9068941
G Notch1 notch receptor 1 JBrowse link NW_004955513 4,225,939 4,264,875 RGD:9068941
G Noto notochord homeobox JBrowse link NW_004955424 12,424,984 12,431,562 RGD:9068941
G Nphp3 nephrocystin 3 JBrowse link NW_004955501 5,799,879 5,837,022 RGD:9068941
G Ovol2 ovo like zinc finger 2 JBrowse link NW_004955415 26,825,284 26,843,438 RGD:9068941
G Pkd2 polycystin 2, transient receptor potential cation channel JBrowse link NW_004955474 1,831,221 1,868,170 RGD:9068941
G Psen1 presenilin 1 JBrowse link NW_004955523 2,128,529 2,210,737 RGD:9068941
G Setdb2 SET domain bifurcated histone lysine methyltransferase 2 JBrowse link NW_004955431 2,899,849 2,943,091 RGD:9068941
G Shh sonic hedgehog signaling molecule JBrowse link NW_004955491 8,647,133 8,657,381 RGD:9068941
G Smad3 SMAD family member 3 JBrowse link NW_004955450 8,747,651 8,842,003 RGD:9068941
G Smo smoothened, frizzled class receptor JBrowse link NW_004955479 9,963,377 9,991,670 RGD:9068941
G Sox17 SRY-box 17 JBrowse link NW_004955454 13,689,403 13,690,019 RGD:9068941
G Sox18 SRY-box 18 JBrowse link NW_004955528 204,729 206,772 RGD:9068941
G Srf serum response factor JBrowse link NW_004955437 9,100,546 9,109,305 RGD:9068941
G Stil STIL centriolar assembly protein JBrowse link NW_004955464 11,213,265 11,288,648 RGD:9068941
G Sufu SUFU negative regulator of hedgehog signaling JBrowse link NW_004955485 7,805,244 7,925,414 RGD:9068941
G Tbx2 T-box 2 JBrowse link NW_004955451 2,458,612 2,466,264 RGD:9068941
G Tbx20 T-box 20 JBrowse link NW_004955460 7,794,313 7,856,906 RGD:9068941
G Tbx3 T-box 3 JBrowse link NW_004955455 15,988,153 16,000,156 RGD:9068941
G Tgfbr2 transforming growth factor beta receptor 2 JBrowse link NW_004955430 21,919,338 21,999,688 RGD:9068941
G Tmed2 transmembrane p24 trafficking protein 2 JBrowse link NW_004955482 5,404,739 5,415,243 RGD:9068941
G Vangl2 VANGL planar cell polarity protein 2 JBrowse link NW_004955468 12,162,084 12,189,322 RGD:9068941
G Wnt3a Wnt family member 3A JBrowse link NW_004955581 351,375 382,541 RGD:9068941
G Wnt5a Wnt family member 5A JBrowse link NW_004955430 5,304,817 5,325,684 RGD:9068941
G Zic3 Zic family member 3 JBrowse link NW_004955489 7,560,684 7,571,739 RGD:9068941
left/right axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ahi1 Abelson helper integration site 1 JBrowse link NW_004955439 1,277,185 1,460,296 RGD:9068941
G Arl13b ADP ribosylation factor like GTPase 13B JBrowse link NW_004955407 3,402,214 3,477,839 RGD:9068941
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 JBrowse link NW_004955436 20,370,950 20,372,677 RGD:9068941
G Dll1 delta like canonical Notch ligand 1 JBrowse link NW_004955411 3,478,943 3,486,541 RGD:9068941
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 JBrowse link NW_004955459 9,641,926 9,783,718 RGD:9068941
G Hspb11 heat shock protein family B (small) member 11 JBrowse link NW_004955464 5,299,206 5,324,136 RGD:9068941
G Ift172 intraflagellar transport 172 JBrowse link NW_004955469 9,418,599 9,455,026 RGD:9068941
G Mns1 meiosis specific nuclear structural 1 JBrowse link NW_004955450 17,819,812 17,852,157 RGD:9068941
G Notch1 notch receptor 1 JBrowse link NW_004955513 4,225,939 4,264,875 RGD:9068941
G Pitx2 paired like homeodomain 2 JBrowse link NW_004955457 15,803,493 15,823,193 RGD:9068941
G Pkd1l1 polycystin 1 like 1, transient receptor potential channel interacting JBrowse link NW_004955456 5,497,126 5,582,342 RGD:9068941
G Setdb2 SET domain bifurcated histone lysine methyltransferase 2 JBrowse link NW_004955431 2,899,849 2,943,091 RGD:9068941
G Smo smoothened, frizzled class receptor JBrowse link NW_004955479 9,963,377 9,991,670 RGD:9068941
left/right pattern formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnaaf1 dynein axonemal assembly factor 1 JBrowse link NW_004955564 132,497 149,399 RGD:9068941
G Dpcd deleted in primary ciliary dyskinesia homolog (mouse) JBrowse link NW_004955485 8,670,261 8,691,545 RGD:9068941
G Foxj1 forkhead box J1 JBrowse link NW_004955506 6,127,551 6,132,302 RGD:9068941
G Ift57 intraflagellar transport 57 JBrowse link NW_004955427 8,814,298 8,871,671 RGD:9068941
G Megf8 multiple EGF like domains 8 JBrowse link NW_004955555 549,921 591,978 RGD:9068941
G Snai1 snail family transcriptional repressor 1 JBrowse link NW_004955445 8,232,084 8,237,893 RGD:9068941
lung induction term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ctnnb1 catenin beta 1 JBrowse link NW_004955420 29,030,716 29,047,447 RGD:9068941
G Wnt2 Wnt family member 2 JBrowse link NW_004955432 22,988,208 23,024,530 RGD:9068941
G Wnt2b Wnt family member 2B JBrowse link NW_004955435 15,948,262 15,962,958 RGD:9068941
lung proximal/distal axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fgf10 fibroblast growth factor 10 JBrowse link NW_004955446 18,163,117 18,244,840 RGD:9068941
mammary gland specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gli3 GLI family zinc finger 3 JBrowse link NW_004955460 1,528,457 1,805,584 RGD:9068941
metanephric capsule specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Foxd1 forkhead box D1 JBrowse link NW_004955425 27,158,601 27,159,447 RGD:9068941
midbrain-hindbrain boundary development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G En1 engrailed homeobox 1 JBrowse link NW_004955459 10,839,581 10,844,198 RGD:9068941
G Fgf8 fibroblast growth factor 8 JBrowse link NW_004955485 8,517,412 8,521,732 RGD:9068941
G Lrp6 LDL receptor related protein 6 JBrowse link NW_004955413 9,080,901 9,237,644 RGD:9068941
midbrain-hindbrain boundary initiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ssbp3 single stranded DNA binding protein 3 JBrowse link NW_004955464 4,901,150 5,049,341 RGD:9068941
midbrain-hindbrain boundary maturation during brain development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Wnt1 Wnt family member 1 JBrowse link NW_004955500 7,797,063 7,811,142 RGD:9068941
midbrain-hindbrain boundary morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gbx2 gastrulation brain homeobox 2 JBrowse link NW_004955453 538,066 541,415 RGD:9068941
G Hes1 hes family bHLH transcription factor 1 JBrowse link NW_004955420 14,565,921 14,568,447 RGD:9068941
G Hes3 hes family bHLH transcription factor 3 JBrowse link NW_004955486 6,272,757 6,273,721 RGD:9068941
G Kdm2b lysine demethylase 2B JBrowse link NW_004955482 6,774,021 6,885,113 RGD:9068941
negative regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tbx18 T-box 18 JBrowse link NW_004955411 12,194,560 12,232,374 RGD:9068941
negative regulation of determination of dorsal identity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ddit3 DNA damage inducible transcript 3 JBrowse link NW_004955458 5,232,979 5,238,513 RGD:9068941
G Sostdc1 sclerostin domain containing 1 JBrowse link NW_004955410 19,657,805 19,662,121 RGD:9068941
negative regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fuz fuzzy planar cell polarity protein JBrowse link NW_004955559 1,112,670 1,117,620 RGD:9068941
negative regulation of heart induction by canonical Wnt signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Wnt3a Wnt family member 3A JBrowse link NW_004955581 351,375 382,541 RGD:9068941
negative regulation of heart looping term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tbx2 T-box 2 JBrowse link NW_004955451 2,458,612 2,466,264 RGD:9068941
negative regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cer1 cerberus 1, DAN family BMP antagonist JBrowse link NW_004955434 17,738,281 17,740,823 RGD:9068941
G Dand5 DAN domain BMP antagonist family member 5 JBrowse link NW_004955415 32,012,637 32,015,965 RGD:9068941
negative regulation of Notch signaling pathway involved in somitogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase JBrowse link NW_004955460 12,773,975 12,784,512 RGD:9068941
negative regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gpr161 G protein-coupled receptor 161 JBrowse link NW_004955462 8,981,729 9,034,009 RGD:9068941
G Prkaca protein kinase cAMP-activated catalytic subunit alpha JBrowse link NW_004955415 32,794,172 32,807,944 RGD:9068941
G Prkacb protein kinase cAMP-activated catalytic subunit beta JBrowse link NW_004955423 9,630,308 9,747,820 RGD:9068941
G Sufu SUFU negative regulator of hedgehog signaling JBrowse link NW_004955485 7,805,244 7,925,414 RGD:9068941
G Traf3ip1 TRAF3 interacting protein 1 JBrowse link NW_004955542 2,264,472 2,301,083 RGD:9068941
G Tulp3 TUB like protein 3 JBrowse link NW_004955429 18,424,912 18,484,522 RGD:9068941
negative regulation of smoothened signaling pathway involved in ventral spinal cord patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ift122 intraflagellar transport 122 JBrowse link NW_004955429 17,795,757 17,858,609 RGD:9068941
G Rfx4 regulatory factor X4 JBrowse link NW_004955405 40,483,391 40,648,992 RGD:9068941
G Tulp3 TUB like protein 3 JBrowse link NW_004955429 18,424,912 18,484,522 RGD:9068941
negative regulation of Wnt signaling pathway involved in dorsal/ventral axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sfrp1 secreted frizzled related protein 1 JBrowse link NW_004955536 1,663,721 1,702,678 RGD:9068941
neural plate anterior/posterior regionalization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Celsr2 cadherin EGF LAG seven-pass G-type receptor 2 JBrowse link NW_004955435 12,671,759 12,695,070 RGD:9068941
neural plate axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G C2cd3 C2 calcium dependent domain containing 3 JBrowse link NW_004955414 17,444,299 17,557,912 RGD:9068941
G Ptch1 patched 1 JBrowse link NW_004955422 22,362,330 22,418,062 RGD:9068941
neural plate mediolateral regionalization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmpr1a bone morphogenetic protein receptor type 1A JBrowse link NW_004955510 5,812,571 5,936,312 RGD:9068941
neural tube patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arl13b ADP ribosylation factor like GTPase 13B JBrowse link NW_004955407 3,402,214 3,477,839 RGD:9068941
G Ift140 intraflagellar transport 140 JBrowse link NW_004955442 15,625,429 15,719,006 RGD:9068941
G Ptch1 patched 1 JBrowse link NW_004955422 22,362,330 22,418,062 RGD:9068941
G Rpgrip1l RPGRIP1 like JBrowse link NW_004955433 11,321,504 11,423,981 RGD:9068941
G Tmem107 transmembrane protein 107 JBrowse link NW_004955467 8,777,078 8,779,164 RGD:9068941
G Traf3ip1 TRAF3 interacting protein 1 JBrowse link NW_004955542 2,264,472 2,301,083 RGD:9068941
nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 JBrowse link NW_004955436 20,370,950 20,372,677 RGD:9068941
G Foxh1 forkhead box H1 JBrowse link NW_004955454 3,094,015 3,096,060 RGD:9068941
G Nodal nodal growth differentiation factor JBrowse link NW_004955437 20,828,448 20,835,486 RGD:9068941
organ induction term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fgf1 fibroblast growth factor 1 JBrowse link NW_004955415 11,151,330 11,245,554 RGD:9068941
G Fgf10 fibroblast growth factor 10 JBrowse link NW_004955446 18,163,117 18,244,840 RGD:9068941
G Fgf8 fibroblast growth factor 8 JBrowse link NW_004955485 8,517,412 8,521,732 RGD:9068941
G Fgfr1 fibroblast growth factor receptor 1 JBrowse link NW_004955463 14,013,247 14,064,354 RGD:9068941
G Frs2 fibroblast growth factor receptor substrate 2 JBrowse link NW_004955405 9,785,857 9,884,220 RGD:9068941
G Gdnf glial cell derived neurotrophic factor JBrowse link NW_004955426 22,386,613 22,412,324 RGD:9068941
G Hoxa11 homeobox A11 JBrowse link NW_004955410 28,875,780 28,879,643 RGD:9068941
G Hoxc11 homeobox C11 JBrowse link NW_004955458 1,231,625 1,234,785 RGD:9068941
G Six1 SIX homeobox 1 JBrowse link NW_004955466 8,961,597 8,966,069 RGD:9068941
G Spry1 sprouty RTK signaling antagonist 1 JBrowse link NW_004955428 17,451,703 17,455,695 RGD:9068941
P granule organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pld6 phospholipase D family member 6 JBrowse link NW_004955577 698,741 702,977 RGD:9068941
G Tdrd5 tudor domain containing 5 JBrowse link NW_004955406 18,895,010 18,961,200 RGD:9068941
pattern specification involved in metanephros development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Osr1 odd-skipped related transcription factor 1 JBrowse link NW_004955469 1,954,470 1,961,344 RGD:9068941
polarity specification of anterior/posterior axis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Shh sonic hedgehog signaling molecule JBrowse link NW_004955491 8,647,133 8,657,381 RGD:9068941
G Wnt8a Wnt family member 8A JBrowse link NW_004955418 2,332,636 2,338,099 RGD:9068941
polarity specification of proximal/distal axis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nodal nodal growth differentiation factor JBrowse link NW_004955437 20,828,448 20,835,486 RGD:9068941
G Wnt8a Wnt family member 8A JBrowse link NW_004955418 2,332,636 2,338,099 RGD:9068941
positive regulation of determination of dorsal identity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acvr1 activin A receptor type 1 JBrowse link NW_004955449 15,587,958 15,706,432 RGD:9068941
G Ctnnb1 catenin beta 1 JBrowse link NW_004955420 29,030,716 29,047,447 RGD:9068941
positive regulation of heart induction by negative regulation of canonical Wnt signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 JBrowse link NW_004955425 7,353,964 7,357,599 RGD:9068941
positive regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nodal nodal growth differentiation factor JBrowse link NW_004955437 20,828,448 20,835,486 RGD:9068941
G Smad2 SMAD family member 2 JBrowse link NW_004955402 33,131,760 33,217,144 RGD:9068941
positive regulation of Notch signaling pathway involved in heart induction term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gata5 GATA binding protein 5 JBrowse link NW_004955528 1,595,231 1,604,979 RGD:9068941
G Robo1 roundabout guidance receptor 1 JBrowse link NW_004955407 12,593,911 13,485,723 RGD:9068941
G Robo2 roundabout guidance receptor 2 JBrowse link NW_004955407 14,301,689 15,549,561 RGD:9068941
positive regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gorab golgin, RAB6 interacting JBrowse link NW_004955462 6,807,618 6,824,296 RGD:9068941
posterior compartment specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pbx3 PBX homeobox 3 JBrowse link NW_004955419 2,419,081 2,624,299 RGD:9068941
primary heart field specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mef2c myocyte enhancer factor 2C JBrowse link NW_004955418 22,537,388 22,701,434 RGD:9068941
primitive streak formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ets2 ETS proto-oncogene 2, transcription factor JBrowse link NW_004955407 37,747,152 37,764,170 RGD:9068941
G Foxa2 forkhead box A2 JBrowse link NW_004955415 29,982,940 29,987,093 RGD:9068941
G Gdf3 growth differentiation factor 3 JBrowse link NW_004955413 6,493,734 6,516,315 RGD:9068941
G Lhx1 LIM homeobox 1 JBrowse link NW_004955451 1,037,936 1,048,501 RGD:9068941
G Lrp6 LDL receptor related protein 6 JBrowse link NW_004955413 9,080,901 9,237,644 RGD:9068941
G Otx2 orthodenticle homeobox 2 JBrowse link NW_004955466 10,755,143 10,764,957 RGD:9068941
G Srf serum response factor JBrowse link NW_004955437 9,100,546 9,109,305 RGD:9068941
G Tbxt T-box transcription factor T JBrowse link NW_004955439 15,675,680 15,683,542 RGD:9068941
G Wnt5a Wnt family member 5A JBrowse link NW_004955430 5,304,817 5,325,684 RGD:9068941
pronephric field specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pax2 paired box 2 JBrowse link NW_004955485 9,351,913 9,430,607 RGD:9068941
G Pax8 paired box 8 JBrowse link NW_004955470 1,016,226 1,072,643 RGD:9068941
proximal/distal axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Six3 SIX homeobox 3 JBrowse link NW_004955441 11,966,389 11,978,545 RGD:9068941
proximal/distal pattern formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aldh1a2 aldehyde dehydrogenase 1 family member A2 JBrowse link NW_004955450 16,406,578 16,453,048 RGD:9068941
G Chsy1 chondroitin sulfate synthase 1 JBrowse link NW_004955416 28,070,981 28,136,848 RGD:9068941
G Ctnnb1 catenin beta 1 JBrowse link NW_004955420 29,030,716 29,047,447 RGD:9068941
G Dll1 delta like canonical Notch ligand 1 JBrowse link NW_004955411 3,478,943 3,486,541 RGD:9068941
G Dlx1 distal-less homeobox 1 JBrowse link NW_004955449 2,920,705 2,924,667 RGD:9068941
G Dlx2 distal-less homeobox 2 JBrowse link NW_004955449 2,907,502 2,909,893 RGD:9068941
G En1 engrailed homeobox 1 JBrowse link NW_004955459 10,839,581 10,844,198 RGD:9068941
G Gli1 GLI family zinc finger 1 JBrowse link NW_004955458 5,181,761 5,193,500 RGD:9068941
G Gli2 GLI family zinc finger 2 JBrowse link NW_004955459 8,892,917 9,124,672 RGD:9068941
G Gli3 GLI family zinc finger 3 JBrowse link NW_004955460 1,528,457 1,805,584 RGD:9068941
G Grem1 gremlin 1, DAN family BMP antagonist JBrowse link NW_004955416 1,812,725 1,825,528 RGD:9068941
G Hoxa10 homeobox A10 JBrowse link NW_004955410 28,864,785 28,874,454 RGD:9068941
G Hoxa11 homeobox A11 JBrowse link NW_004955410 28,875,780 28,879,643 RGD:9068941
G Hoxa9 homeobox A9 JBrowse link NW_004955410 28,856,661 28,861,803 RGD:9068941
G Hoxc10 homeobox C10 JBrowse link NW_004955458 1,243,529 1,248,653 RGD:9068941
G Hoxc11 homeobox C11 JBrowse link NW_004955458 1,231,625 1,234,785 RGD:9068941
G Hoxd10 homeobox D10 JBrowse link NW_004955403 20,543,224 20,548,801 RGD:9068941
G Hoxd9 homeobox D9 JBrowse link NW_004955451 12,619,722 12,621,320 RGD:9068941
G LOC102023166 cytochrome P450 26B1 JBrowse link NW_004955424 13,336,189 13,355,368 RGD:9068941
G Lrp4 LDL receptor related protein 4 JBrowse link NW_004955422 1,191,338 1,238,227 RGD:9068941
G Pbx1 PBX homeobox 1 JBrowse link NW_004955462 11,777,168 12,083,068 RGD:9068941
G Pbx2 PBX homeobox 2 JBrowse link NW_004955437 648,935 654,008 RGD:9068941
G Sp8 Sp8 transcription factor JBrowse link NW_004955410 23,401,888 23,404,654 RGD:9068941
G Tp63 tumor protein p63 JBrowse link NW_004955420 18,178,639 18,384,786 RGD:9068941
proximal/distal pattern formation involved in metanephric nephron development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Irx1 iroquois homeobox 1 JBrowse link NW_004955504 2,072,540 2,099,781 RGD:9068941
G Irx2 iroquois homeobox 2 JBrowse link NW_004955504 1,456,433 1,460,996 RGD:9068941
radial pattern formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nr2f2 nuclear receptor subfamily 2 group F member 2 JBrowse link NW_004955416 24,148,052 24,154,406 RGD:9068941
regulation of adaxial/abaxial pattern formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Eed embryonic ectoderm development JBrowse link NW_004955414 6,659,144 6,685,530 RGD:9068941
regulation of cell motility involved in somitogenic axis elongation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nkd1 NKD inhibitor of WNT signaling pathway 1 JBrowse link NW_004955433 8,622,568 8,705,356 RGD:9068941
G Ppp2r3a protein phosphatase 2 regulatory subunit B''alpha JBrowse link NW_004955501 2,648,017 2,751,999 RGD:9068941
regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nog noggin JBrowse link NW_004955451 6,192,368 6,193,766 RGD:9068941
regulation of heart induction by regulation of canonical Wnt signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pou5f1 POU class 5 homeobox 1 JBrowse link NW_004955583 995,707 1,003,202 RGD:9068941
regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Shh sonic hedgehog signaling molecule JBrowse link NW_004955491 8,647,133 8,657,381 RGD:9068941
regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mks1 MKS transition zone complex subunit 1 JBrowse link NW_004955451 4,805,542 4,818,233 RGD:9068941
regulation of somitogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdx1 caudal type homeobox 1 JBrowse link NW_004955415 4,337,903 4,355,782 RGD:9068941
G Cdx2 caudal type homeobox 2 JBrowse link NW_004955497 7,316,372 7,321,627 RGD:9068941
G Dll1 delta like canonical Notch ligand 1 JBrowse link NW_004955411 3,478,943 3,486,541 RGD:9068941
G Dmrt2 doublesex and mab-3 related transcription factor 2 JBrowse link NW_004955434 5,528,625 5,535,783 RGD:9068941
G Hes7 hes family bHLH transcription factor 7 JBrowse link NW_004955467 8,837,895 8,841,062 RGD:9068941
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase JBrowse link NW_004955460 12,773,975 12,784,512 RGD:9068941
G Notch1 notch receptor 1 JBrowse link NW_004955513 4,225,939 4,264,875 RGD:9068941
regulation of transcription from RNA polymerase II promoter involved in ventral spinal cord interneuron specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Evx1 even-skipped homeobox 1 JBrowse link NW_004955410 28,939,416 28,942,751 RGD:9068941
G Nkx6-1 NK6 homeobox 1 JBrowse link NW_004955474 5,211,281 5,214,785 RGD:9068941
G Nkx6-2 NK6 homeobox 2 JBrowse link NW_004955477 10,386,033 10,387,423 RGD:9068941
G Pax6 paired box 6 JBrowse link NW_004955476 10,058,979 10,074,668 RGD:9068941
regulation of transcription involved in anterior/posterior axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ddit3 DNA damage inducible transcript 3 JBrowse link NW_004955458 5,232,979 5,238,513 RGD:9068941
G Wnt8a Wnt family member 8A JBrowse link NW_004955418 2,332,636 2,338,099 RGD:9068941
retinoic acid receptor signaling pathway involved in somitogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aldh1a2 aldehyde dehydrogenase 1 family member A2 JBrowse link NW_004955450 16,406,578 16,453,048 RGD:9068941
rostrocaudal neural tube patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp6ap2 ATPase H+ transporting accessory protein 2 JBrowse link NW_004955565 2,006,154 2,029,921 RGD:9068941
G Sox17 SRY-box 17 JBrowse link NW_004955454 13,689,403 13,690,019 RGD:9068941
secondary heart field specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Axin2 axin 2 JBrowse link NW_004955478 4,952,551 4,982,223 RGD:9068941
G Bmp4 bone morphogenetic protein 4 JBrowse link NW_004955409 9,432,835 9,439,680 RGD:9068941
G Foxh1 forkhead box H1 JBrowse link NW_004955454 3,094,015 3,096,060 RGD:9068941
G Isl1 ISL LIM homeobox 1 JBrowse link NW_004955446 15,824,956 15,835,000 RGD:9068941
G Lrp2 LDL receptor related protein 2 JBrowse link NW_004955449 5,155,109 5,314,886 RGD:9068941
G Mef2c myocyte enhancer factor 2C JBrowse link NW_004955418 22,537,388 22,701,434 RGD:9068941
G Rbpj recombination signal binding protein for immunoglobulin kappa J region JBrowse link NW_004955443 18,783,061 19,029,441 RGD:9068941
G Smarcd3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 JBrowse link NW_004955491 5,653,284 5,657,546 RGD:9068941
segment specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmi1 BMI1 proto-oncogene, polycomb ring finger JBrowse link NW_004955429 6,548,586 6,553,730 RGD:9068941
G Dvl2 dishevelled segment polarity protein 2 JBrowse link NW_004955467 9,675,912 9,683,996 RGD:9068941
G Hoxa2 homeobox A2 JBrowse link NW_004955410 28,794,878 28,798,231 RGD:9068941
G Mafb MAF bZIP transcription factor B JBrowse link NW_004955445 16,219,675 16,222,913 RGD:9068941
G Mllt3 MLLT3 super elongation complex subunit JBrowse link NW_004955434 22,594,681 22,873,826 RGD:9068941
G Msgn1 mesogenin 1 JBrowse link NW_004955469 617,029 617,610 RGD:9068941
G Mtf2 metal response element binding transcription factor 2 JBrowse link NW_004955423 1,469,498 1,534,082 RGD:9068941
segmentation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acd ACD shelterin complex subunit and telomerase recruitment factor JBrowse link NW_004955484 9,022,520 9,025,446 RGD:9068941
sensory organ boundary specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ntf4 neurotrophin 4 JBrowse link NW_004955559 1,647,685 1,650,553 RGD:9068941
smoothened signaling pathway involved in dorsal/ventral neural tube patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gli2 GLI family zinc finger 2 JBrowse link NW_004955459 8,892,917 9,124,672 RGD:9068941
G Gli3 GLI family zinc finger 3 JBrowse link NW_004955460 1,528,457 1,805,584 RGD:9068941
G Ift122 intraflagellar transport 122 JBrowse link NW_004955429 17,795,757 17,858,609 RGD:9068941
G Ptch1 patched 1 JBrowse link NW_004955422 22,362,330 22,418,062 RGD:9068941
G Tbc1d32 TBC1 domain family member 32 JBrowse link NW_004955436 3,385,216 3,542,497 RGD:9068941
G Tulp3 TUB like protein 3 JBrowse link NW_004955429 18,424,912 18,484,522 RGD:9068941
G Wdr19 WD repeat domain 19 JBrowse link NW_004955443 8,053,847 8,122,918 RGD:9068941
smoothened signaling pathway involved in spinal cord motor neuron cell fate specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gli2 GLI family zinc finger 2 JBrowse link NW_004955459 8,892,917 9,124,672 RGD:9068941
G Gli3 GLI family zinc finger 3 JBrowse link NW_004955460 1,528,457 1,805,584 RGD:9068941
G Sufu SUFU negative regulator of hedgehog signaling JBrowse link NW_004955485 7,805,244 7,925,414 RGD:9068941
smoothened signaling pathway involved in ventral spinal cord interneuron specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gli2 GLI family zinc finger 2 JBrowse link NW_004955459 8,892,917 9,124,672 RGD:9068941
G Gli3 GLI family zinc finger 3 JBrowse link NW_004955460 1,528,457 1,805,584 RGD:9068941
G Sufu SUFU negative regulator of hedgehog signaling JBrowse link NW_004955485 7,805,244 7,925,414 RGD:9068941
smoothened signaling pathway involved in ventral spinal cord patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Smo smoothened, frizzled class receptor JBrowse link NW_004955479 9,963,377 9,991,670 RGD:9068941
somite rostral/caudal axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 JBrowse link NW_004955459 9,641,926 9,783,718 RGD:9068941
G Gdf3 growth differentiation factor 3 JBrowse link NW_004955413 6,493,734 6,516,315 RGD:9068941
G Kdm6a lysine demethylase 6A JBrowse link NW_004955516 3,151,350 3,346,832 RGD:9068941
G Lhx1 LIM homeobox 1 JBrowse link NW_004955451 1,037,936 1,048,501 RGD:9068941
G Ripply1 ripply transcriptional repressor 1 JBrowse link NW_004955490 9,167,071 9,172,101 RGD:9068941
G Ripply2 ripply transcriptional repressor 2 JBrowse link NW_004955411 11,418,744 11,422,766 RGD:9068941
G Smad4 SMAD family member 4 JBrowse link NW_004955402 35,956,080 36,001,746 RGD:9068941
G Tbx6 T-box 6 JBrowse link NW_004955493 6,888,832 6,894,840 RGD:9068941
G Tmed2 transmembrane p24 trafficking protein 2 JBrowse link NW_004955482 5,404,739 5,415,243 RGD:9068941
somite specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dll1 delta like canonical Notch ligand 1 JBrowse link NW_004955411 3,478,943 3,486,541 RGD:9068941
G Meox1 mesenchyme homeobox 1 JBrowse link NW_004955451 17,013,180 17,022,131 RGD:9068941
G Meox2 mesenchyme homeobox 2 JBrowse link NW_004955410 18,924,669 18,988,478 RGD:9068941
G Ripply1 ripply transcriptional repressor 1 JBrowse link NW_004955490 9,167,071 9,172,101 RGD:9068941
somitogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abi1 abl interactor 1 JBrowse link NW_004955429 2,682,341 2,783,752 RGD:9068941
G Atm ATM serine/threonine kinase JBrowse link NW_004955412 10,422,753 10,531,406 RGD:9068941
G Axin2 axin 2 JBrowse link NW_004955478 4,952,551 4,982,223 RGD:9068941
G Bhlhe40 basic helix-loop-helix family member e40 JBrowse link NW_004955421 8,463,337 8,468,877 RGD:9068941
G Bhlhe41 basic helix-loop-helix family member e41 JBrowse link NW_004955413 21,100,021 21,103,358 RGD:9068941
G Bmpr1a bone morphogenetic protein receptor type 1A JBrowse link NW_004955510 5,812,571 5,936,312 RGD:9068941
G Crb2 crumbs cell polarity complex component 2 JBrowse link NW_004955419 4,604,883 4,626,675 RGD:9068941
G Dll1 delta like canonical Notch ligand 1 JBrowse link NW_004955411 3,478,943 3,486,541 RGD:9068941
G Dll3 delta like canonical Notch ligand 3 JBrowse link NW_004955468 70,714 78,831 RGD:9068941
G Ep300 E1A binding protein p300 JBrowse link NW_004955413 26,647,553 26,727,875 RGD:9068941
G Foxb1 forkhead box B1 JBrowse link NW_004955450 14,867,941 14,902,990 RGD:9068941
G Foxf1 forkhead box F1 JBrowse link NW_004955541 1,341,715 1,345,397 RGD:9068941
G Hes1 hes family bHLH transcription factor 1 JBrowse link NW_004955420 14,565,921 14,568,447 RGD:9068941
G Hes2 hes family bHLH transcription factor 2 JBrowse link NW_004955486 6,158,863 6,161,289 RGD:9068941
G Hes3 hes family bHLH transcription factor 3 JBrowse link NW_004955486 6,272,757 6,273,721 RGD:9068941
G Hes5 hes family bHLH transcription factor 5 JBrowse link NW_004955486 8,700,212 8,701,581 RGD:9068941
G Hes6 hes family bHLH transcription factor 6 JBrowse link NW_004955542 2,373,241 2,374,827 RGD:9068941
G Hes7 hes family bHLH transcription factor 7 JBrowse link NW_004955467 8,837,895 8,841,062 RGD:9068941
G Kat2a lysine acetyltransferase 2A JBrowse link NW_004955451 16,192,228 16,197,103 RGD:9068941
G Lef1 lymphoid enhancer binding factor 1 JBrowse link NW_004955496 1,728,840 1,827,749 RGD:9068941
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase JBrowse link NW_004955460 12,773,975 12,784,512 RGD:9068941
G Mesp2 mesoderm posterior bHLH transcription factor 2 JBrowse link NW_004955416 15,447,959 15,450,209 RGD:9068941
G Mib1 mindbomb E3 ubiquitin protein ligase 1 JBrowse link NW_004955402 10,392,308 10,502,576 RGD:9068941
G Msgn1 mesogenin 1 JBrowse link NW_004955469 617,029 617,610 RGD:9068941
G Myf5 myogenic factor 5 JBrowse link NW_004955405 19,345,943 19,348,453 RGD:9068941
G Myf6 myogenic factor 6 JBrowse link NW_004955405 19,336,798 19,338,610 RGD:9068941
G Nkx3-1 NK3 homeobox 1 JBrowse link NW_004955403 46,807,846 46,809,924 RGD:9068941
G Nle1 notchless homolog 1 JBrowse link NW_004955481 9,821,329 9,830,350 RGD:9068941
G Palb2 partner and localizer of BRCA2 JBrowse link NW_004955493 2,149,053 2,175,482 RGD:9068941
G Pax1 paired box 1 JBrowse link NW_004955415 29,413,253 29,420,682 RGD:9068941
G Pcdh8 protocadherin 8 JBrowse link NW_004955404 50,403,752 50,413,264 RGD:9068941
G Plxna2 plexin A2 JBrowse link NW_004955489 3,914,137 4,116,780 RGD:9068941
G Pofut1 protein O-fucosyltransferase 1 JBrowse link NW_004955422 28,809,901 28,833,186 RGD:9068941
G Poglut1 protein O-glucosyltransferase 1 JBrowse link NW_004955427 19,188,512 19,206,050 RGD:9068941
G Prkdc protein kinase, DNA-activated, catalytic subunit JBrowse link NW_004955454 7,733,697 7,890,896 RGD:9068941
G Psen1 presenilin 1 JBrowse link NW_004955523 2,128,529 2,210,737 RGD:9068941
G Rbpj recombination signal binding protein for immunoglobulin kappa J region JBrowse link NW_004955443 18,783,061 19,029,441 RGD:9068941
G Ripply2 ripply transcriptional repressor 2 JBrowse link NW_004955411 11,418,744 11,422,766 RGD:9068941
G Ror2 receptor tyrosine kinase like orphan receptor 2 JBrowse link NW_004955515 313,612 554,751 RGD:9068941
G Sema3c semaphorin 3C JBrowse link NW_004955410 4,795,658 4,953,460 RGD:9068941
G Smad3 SMAD family member 3 JBrowse link NW_004955450 8,747,651 8,842,003 RGD:9068941
G Tbxt T-box transcription factor T JBrowse link NW_004955439 15,675,680 15,683,542 RGD:9068941
G Tcap titin-cap JBrowse link NW_004955451 14,413,657 14,414,735 RGD:9068941
G Tcf15 transcription factor 15 JBrowse link NW_004955597 446,489 452,003 RGD:9068941
G Tp53 tumor protein p53 JBrowse link NW_004955467 9,241,391 9,256,716 RGD:9068941
G Wnt5a Wnt family member 5A JBrowse link NW_004955430 5,304,817 5,325,684 RGD:9068941
G Xrcc2 X-ray repair cross complementing 2 JBrowse link NW_004955491 6,579,443 6,629,410 RGD:9068941
G Zeb2 zinc finger E-box binding homeobox 2 JBrowse link NW_004955440 10,755,658 10,881,044 RGD:9068941
specification of animal organ identity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tbr1 T-box, brain 1 JBrowse link NW_004955449 12,293,534 12,301,440 RGD:9068941
specification of animal organ position term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp4 bone morphogenetic protein 4 JBrowse link NW_004955409 9,432,835 9,439,680 RGD:9068941
G Hoxa3 homeobox A3 JBrowse link NW_004955410 28,801,918 28,846,605 RGD:9068941
G Tbx3 T-box 3 JBrowse link NW_004955455 15,988,153 16,000,156 RGD:9068941
specification of anterior mesonephric tubule identity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Osr1 odd-skipped related transcription factor 1 JBrowse link NW_004955469 1,954,470 1,961,344 RGD:9068941
specification of axis polarity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ahi1 Abelson helper integration site 1 JBrowse link NW_004955439 1,277,185 1,460,296 RGD:9068941
G Bcor BCL6 corepressor JBrowse link NW_004955566 1,412,540 1,510,339 RGD:9068941
specification of loop of Henle identity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hes5 hes family bHLH transcription factor 5 JBrowse link NW_004955486 8,700,212 8,701,581 RGD:9068941
G Irx1 iroquois homeobox 1 JBrowse link NW_004955504 2,072,540 2,099,781 RGD:9068941
G Irx2 iroquois homeobox 2 JBrowse link NW_004955504 1,456,433 1,460,996 RGD:9068941
G Irx3 iroquois homeobox 3 JBrowse link NW_004955433 11,944,890 11,948,372 RGD:9068941
specification of posterior mesonephric tubule identity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Osr1 odd-skipped related transcription factor 1 JBrowse link NW_004955469 1,954,470 1,961,344 RGD:9068941
specification of ureteric bud anterior/posterior symmetry by BMP signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp4 bone morphogenetic protein 4 JBrowse link NW_004955409 9,432,835 9,439,680 RGD:9068941
spinal cord anterior/posterior patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gdf11 growth differentiation factor 11 JBrowse link NW_004955458 3,388,402 3,398,040 RGD:9068941
spinal cord dorsal/ventral patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gli2 GLI family zinc finger 2 JBrowse link NW_004955459 8,892,917 9,124,672 RGD:9068941
G Intu inturned planar cell polarity protein JBrowse link NW_004955428 13,670,756 13,743,030 RGD:9068941
G Shh sonic hedgehog signaling molecule JBrowse link NW_004955491 8,647,133 8,657,381 RGD:9068941
spinal cord patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Reln reelin JBrowse link NW_004955410 8,424,439 8,863,966 RGD:9068941
telencephalon regionalization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp2 bone morphogenetic protein 2 JBrowse link NW_004955415 17,048,374 17,058,172 RGD:9068941
G Bmp4 bone morphogenetic protein 4 JBrowse link NW_004955409 9,432,835 9,439,680 RGD:9068941
G Gsx2 GS homeobox 2 JBrowse link NW_004955447 16,714,870 16,715,757 RGD:9068941
G Lhx2 LIM homeobox 2 JBrowse link NW_004955419 3,999,364 4,019,543 RGD:9068941
G Shh sonic hedgehog signaling molecule JBrowse link NW_004955491 8,647,133 8,657,381 RGD:9068941
G Six3 SIX homeobox 3 JBrowse link NW_004955441 11,966,389 11,978,545 RGD:9068941
thorax and anterior abdomen determination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Basp1 brain abundant membrane attached signal protein 1 JBrowse link NW_004955426 6,149,756 6,193,222 RGD:9068941
G Neurog1 neurogenin 1 JBrowse link NW_004955408 30,693,893 30,695,453 RGD:9068941
G Wt1 WT1 transcription factor JBrowse link NW_004955476 10,464,688 10,504,473 RGD:9068941
transforming growth factor beta receptor signaling pathway involved in primitive streak formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nodal nodal growth differentiation factor JBrowse link NW_004955437 20,828,448 20,835,486 RGD:9068941
ventral midline determination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Smo smoothened, frizzled class receptor JBrowse link NW_004955479 9,963,377 9,991,670 RGD:9068941
ventral spinal cord interneuron fate commitment term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ascl1 achaete-scute family bHLH transcription factor 1 JBrowse link NW_004955405 37,941,243 37,943,641 RGD:9068941
G Dll4 delta like canonical Notch ligand 4 JBrowse link NW_004955416 7,807,049 7,816,346 RGD:9068941
G Foxn4 forkhead box N4 JBrowse link NW_004955455 9,182,405 9,210,365 RGD:9068941
ventral spinal cord interneuron fate determination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nkx2-2 NK2 homeobox 2 JBrowse link NW_004955415 29,263,741 29,268,259 RGD:9068941
ventral spinal cord interneuron specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dbx1 developing brain homeobox 1 JBrowse link NW_004955476 1,018,715 1,022,648 RGD:9068941
G Dmrt3 doublesex and mab-3 related transcription factor 3 JBrowse link NW_004955434 5,455,449 5,470,343 RGD:9068941
G Lhx3 LIM homeobox 3 JBrowse link NW_004955513 4,464,149 4,470,962 RGD:9068941
ventral trunk neural crest cell migration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nrp1 neuropilin 1 JBrowse link NW_004955462 4,101,997 4,241,012 RGD:9068941
G Nrp2 neuropilin 2 JBrowse link NW_004955457 9,197,621 9,316,789 RGD:9068941
G Sema3a semaphorin 3A JBrowse link NW_004955410 2,146,088 2,344,342 RGD:9068941
G Sema3f semaphorin 3F JBrowse link NW_004955532 1,992,417 2,015,879 RGD:9068941
vertebrate eye-specific patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G C1qa complement C1q A chain JBrowse link NW_004955452 2,753,362 2,756,220 RGD:9068941
G C3 complement C3 JBrowse link NW_004955495 2,796,601 2,824,233 RGD:9068941
G Itgam integrin subunit alpha M JBrowse link NW_004955493 8,116,886 8,160,806 RGD:9068941
Wnt signaling pathway involved in somitogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 JBrowse link NW_004955425 7,353,964 7,357,599 RGD:9068941
G Lrp6 LDL receptor related protein 6 JBrowse link NW_004955413 9,080,901 9,237,644 RGD:9068941
G Ppp2r3a protein phosphatase 2 regulatory subunit B''alpha JBrowse link NW_004955501 2,648,017 2,751,999 RGD:9068941
G Sfrp1 secreted frizzled related protein 1 JBrowse link NW_004955536 1,663,721 1,702,678 RGD:9068941
G Sfrp2 secreted frizzled related protein 2 JBrowse link NW_004955471 8,103,937 8,112,596 RGD:9068941
zygotic determination of anterior/posterior axis, embryo term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pcsk6 proprotein convertase subtilisin/kexin type 6 JBrowse link NW_004955416 28,184,768 28,314,697 RGD:9068941
zygotic specification of dorsal/ventral axis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cxxc4 CXXC finger protein 4 JBrowse link NW_004955496 4,523,027 4,546,671 RGD:9068941
G Smad2 SMAD family member 2 JBrowse link NW_004955402 33,131,760 33,217,144 RGD:9068941
G Smad6 SMAD family member 6 JBrowse link NW_004955450 9,005,332 9,070,790 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 14516
    multicellular organismal process 6534
      pattern specification process 425
        axis specification + 79
        cell fate commitment involved in pattern specification + 14
        embryonic pattern specification + 58
        head segmentation + 0
        imaginal disc lineage restriction + 0
        internode patterning 0
        intracellular mRNA localization involved in pattern specification process + 0
        lung pattern specification process + 1
        maintenance of left/right asymmetry + 0
        neural plate pattern specification + 8
        ommatidial rotation 0
        pattern specification involved in kidney development + 9
        regionalization + 332
        regulation of R8 cell spacing in compound eye + 0
        renal system pattern specification + 9
        segment specification + 16
        specification of axis polarity + 5
        specification of symmetry + 123
Path 2
Term Annotations click to browse term
  biological_process 14516
    developmental process 5723
      anatomical structure development 5377
        multicellular organism development 4941
          pattern specification process 425
            axis specification + 79
            cell fate commitment involved in pattern specification + 14
            embryonic pattern specification + 58
            head segmentation + 0
            imaginal disc lineage restriction + 0
            internode patterning 0
            intracellular mRNA localization involved in pattern specification process + 0
            lung pattern specification process + 1
            maintenance of left/right asymmetry + 0
            neural plate pattern specification + 8
            ommatidial rotation 0
            pattern specification involved in kidney development + 9
            regionalization + 332
            regulation of R8 cell spacing in compound eye + 0
            renal system pattern specification + 9
            segment specification + 16
            specification of axis polarity + 5
            specification of symmetry + 123
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.