ONTOLOGY REPORT - ANNOTATIONS


Term:pattern specification process
go back to main search page
Accession:GO:0007389 term browser browse the term
Definition:Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate.
Synonyms:related_synonym: pattern biosynthesis;   pattern formation


show annotations for term's descendants       view all columns           Sort by:
 
pattern specification process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acvr1 activin A receptor, type 1 JBrowse link 2 58,446,438 58,566,828 RGD:2290270
G Acvr1b activin A receptor, type 1B JBrowse link 15 101,174,125 101,212,601 RGD:2290270
G Acvr1c activin A receptor, type IC JBrowse link 2 58,267,453 58,357,898 RGD:2290270
G Acvr2a activin receptor IIA JBrowse link 2 48,814,109 48,903,264 RGD:2290270
G Acvr2b activin receptor IIB JBrowse link 9 119,401,584 119,442,148 RGD:2290270
G Acvrl1 activin A receptor, type II-like 1 JBrowse link 15 101,128,522 101,145,336 RGD:2290270
G Alx3 aristaless-like homeobox 3 JBrowse link 3 107,595,031 107,605,875 RGD:2290270
G Alx4 aristaless-like homeobox 4 JBrowse link 2 93,642,434 93,681,341 RGD:2290270
G Amhr2 anti-Mullerian hormone type 2 receptor JBrowse link 15 102,445,007 102,454,640 RGD:2290270
G Apc APC, WNT signaling pathway regulator JBrowse link 18 34,220,617 34,322,190 RGD:2290270
G Apc2 adenomatosis polyposis coli 2 JBrowse link 10 80,295,958 80,318,257 RGD:2290270
G Ascl1 achaete-scute family bHLH transcription factor 1 JBrowse link 10 87,491,041 87,493,660 RGD:2290270
G Asph aspartate-beta-hydroxylase JBrowse link 4 9,449,085 9,669,344 RGD:2290270
G Bmp5 bone morphogenetic protein 5 JBrowse link 9 75,775,365 75,900,316 RGD:2290270
G Bmp7 bone morphogenetic protein 7 JBrowse link 2 172,868,012 172,940,321 RGD:2290270
G Bmpr1a bone morphogenetic protein receptor, type 1A JBrowse link 14 34,411,068 34,503,461 RGD:2290270
G Bmpr1b bone morphogenetic protein receptor, type 1B JBrowse link 3 141,837,136 142,169,594 RGD:2290270
G Bmpr2 bone morphogenetic protein receptor, type II (serine/threonine kinase) JBrowse link 1 59,764,270 59,878,081 RGD:2290270
G C2cd3 C2 calcium-dependent domain containing 3 JBrowse link 7 100,372,233 100,470,159 RGD:2290270
G Cdx1 caudal type homeobox 1 JBrowse link 18 61,018,862 61,036,199 RGD:2290270
G Cdx2 caudal type homeobox 2 JBrowse link 5 147,300,900 147,307,249 RGD:2290270
G Chrd chordin JBrowse link 16 20,733,050 20,742,384 RGD:2290270
G Crkl v-crk avian sarcoma virus CT10 oncogene homolog-like JBrowse link 16 17,451,985 17,487,440 RGD:2290270
G Dchs1 dachsous cadherin related 1 JBrowse link 7 105,752,989 105,788,322 RGD:2290270
G Disp1 dispatched RND transporter family member 1 JBrowse link 1 183,086,264 183,221,535 RGD:2290270
G Eya1 EYA transcriptional coactivator and phosphatase 1 JBrowse link 1 14,168,953 14,310,267 RGD:2290270
G Foxa2 forkhead box A2 JBrowse link 2 148,042,877 148,046,969 RGD:2290270
G Fst follistatin JBrowse link 13 114,452,262 114,458,951 RGD:2290270
G Gli2 GLI-Kruppel family member GLI2 JBrowse link 1 118,834,061 119,053,619 RGD:2290270
G Gli3 GLI-Kruppel family member GLI3 JBrowse link 13 15,463,723 15,730,026 RGD:2290270
G Grhl3 grainyhead like transcription factor 3 JBrowse link 4 135,541,887 135,573,625 RGD:2290270
G Gsx2 GS homeobox 2 JBrowse link 5 75,075,601 75,077,893 RGD:2290270
G Hes1 hes family bHLH transcription factor 1 JBrowse link 16 30,065,357 30,067,796 RGD:2290270
G Hey2 hairy/enhancer-of-split related with YRPW motif 2 JBrowse link 10 30,832,359 30,842,783 RGD:2290270
G Hoxa2 homeobox A2 JBrowse link 6 52,162,417 52,164,831 RGD:2290270
G Hoxa5 homeobox A5 JBrowse link 6 52,201,754 52,204,587 RGD:2290270
G Hoxd11 homeobox D11 JBrowse link 2 74,679,558 74,687,016 RGD:2290270
G Hoxd12 homeobox D12 JBrowse link 2 74,675,013 74,677,705 RGD:2290270
G Hoxd13 homeobox D13 JBrowse link 2 74,668,310 74,671,599 RGD:2290270
G Ihh Indian hedgehog JBrowse link 1 74,945,315 74,951,672 RGD:2290270
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase JBrowse link 5 140,607,341 140,615,545 RGD:2290270
G Lhx1 LIM homeobox protein 1 JBrowse link 11 84,519,379 84,525,534 RGD:2290270
G Mdga2 MAM domain containing glycosylphosphatidylinositol anchor 2 JBrowse link 12 66,459,419 67,222,549 RGD:2290270
G Mfng MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase JBrowse link 15 78,755,882 78,773,516 RGD:2290270
G Nkx2-1 NK2 homeobox 1 JBrowse link 12 56,531,935 56,536,908 RGD:2290270
G Nog noggin JBrowse link 11 89,300,638 89,302,559 RGD:2290270
G Nrg3 neuregulin 3 JBrowse link 14 38,365,102 39,473,088 RGD:2290270
G Pax1 paired box 1 JBrowse link 2 147,361,918 147,375,049 RGD:2290270
G Ptch1 patched 1 JBrowse link 13 63,508,328 63,573,616 RGD:2290270
G Rax retina and anterior neural fold homeobox JBrowse link 18 65,934,639 65,939,089 RGD:2290270
G Rfng RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase JBrowse link 11 120,780,745 120,784,217 RGD:2290270
G Rnf111 ring finger 111 JBrowse link 9 70,425,424 70,503,725 RGD:2290270
G Shh sonic hedgehog JBrowse link 5 28,456,840 28,467,101 RGD:2290270
G Shroom3 shroom family member 3 JBrowse link 5 92,683,435 92,965,759 RGD:2290270
G Six1 sine oculis-related homeobox 1 JBrowse link 12 73,041,827 73,046,712 RGD:2290270
G Smad2 SMAD family member 2 JBrowse link 18 76,241,265 76,311,748 RGD:2290270
G Smo smoothened, frizzled class receptor JBrowse link 6 29,735,497 29,761,366 RGD:2290270
G Sostdc1 sclerostin domain containing 1 JBrowse link 12 36,314,169 36,318,452 RGD:2290270
G Syngap1 synaptic Ras GTPase activating protein 1 homolog (rat) JBrowse link 17 26,941,408 26,972,434 RGD:2290270
G Tbx1 T-box 1 JBrowse link 16 18,581,704 18,590,671 RGD:2290270
G Tbx5 T-box 5 JBrowse link 5 119,796,514 119,885,220 RGD:2290270
G Tgfbr1 transforming growth factor, beta receptor I JBrowse link 4 47,353,222 47,414,926 RGD:2290270
G Tgfbr2 transforming growth factor, beta receptor II JBrowse link 9 116,087,695 116,175,363 RGD:2290270
G Trp63 transformation related protein 63 JBrowse link 16 25,683,763 25,892,088 RGD:2290270
G Uncx UNC homeobox JBrowse link 5 139,543,898 139,548,179 RGD:2290270
G Zeb1 zinc finger E-box binding homeobox 1 JBrowse link 18 5,591,860 5,775,468 RGD:2290270
G Zic1 zinc finger protein of the cerebellum 1 JBrowse link 9 91,358,058 91,365,826 RGD:2290270
G Zic3 zinc finger protein of the cerebellum 3 JBrowse link X 58,021,464 58,041,735 RGD:2290270
activation of prostate induction by androgen receptor signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ar androgen receptor JBrowse link X 98,148,757 98,323,218 RGD:2290270
anterior/posterior axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aurka aurora kinase A JBrowse link 2 172,356,190 172,370,706 RGD:2290270
G Bmp4 bone morphogenetic protein 4 JBrowse link 14 46,383,525 46,390,669 RGD:2290270
G Cdx1 caudal type homeobox 1 JBrowse link 18 61,018,862 61,036,199 RGD:2290270
G Cdx2 caudal type homeobox 2 JBrowse link 5 147,300,900 147,307,249 RGD:2290270
G Cdx4 caudal type homeobox 4 JBrowse link X 103,321,398 103,330,224 RGD:2290270
G Cer1 cerberus 1, DAN family BMP antagonist JBrowse link 4 82,881,751 82,885,151 RGD:2290270
G Ctnnb1 catenin (cadherin associated protein), beta 1 JBrowse link 9 120,933,400 120,960,507 RGD:2290270
G Gpc3 glypican 3 JBrowse link X 52,272,426 52,613,974 RGD:2290270
G Hey1 hairy/enhancer-of-split related with YRPW motif 1 JBrowse link 3 8,663,359 8,667,038 RGD:2290270
G Hey2 hairy/enhancer-of-split related with YRPW motif 2 JBrowse link 10 30,832,359 30,842,783 RGD:2290270
G Ldb1 LIM domain binding 1 JBrowse link 19 46,032,589 46,045,515 RGD:2290270
G Lefty1 left right determination factor 1 JBrowse link 1 180,935,039 180,938,401 RGD:2290270
G Lhx1 LIM homeobox protein 1 JBrowse link 11 84,519,379 84,525,534 RGD:2290270
G Nodal nodal JBrowse link 10 61,417,972 61,425,337 RGD:2290270
G Pgap1 post-GPI attachment to proteins 1 JBrowse link 1 54,473,000 54,557,684 RGD:2290270
G Rnf2 ring finger protein 2 JBrowse link 1 151,469,406 151,500,922 RGD:2290270
G Six2 sine oculis-related homeobox 2 JBrowse link 17 85,662,742 85,688,254 RGD:2290270
G Ski ski sarcoma viral oncogene homolog (avian) JBrowse link 4 155,154,075 155,222,592 RGD:2290270
G Tbx18 T-box18 JBrowse link 9 87,702,800 87,731,260 RGD:2290270
G Tdgf1 teratocarcinoma-derived growth factor 1 JBrowse link 9 110,939,608 110,946,158 RGD:2290270
G Wls wntless WNT ligand secretion mediator JBrowse link 3 159,839,695 159,938,670 RGD:2290270
G Wnt3 wingless-type MMTV integration site family, member 3 JBrowse link 11 103,774,175 103,818,021 RGD:2290270
anterior/posterior axis specification, embryo term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Frs2 fibroblast growth factor receptor substrate 2 JBrowse link 10 117,070,127 117,148,474 RGD:2290270
G Fzd5 frizzled class receptor 5 JBrowse link 1 64,730,558 64,737,750 RGD:2290270
G Tbx3 T-box 3 JBrowse link 5 119,670,319 119,684,724 RGD:2290270
G Tcf7l1 transcription factor 7 like 1 (T cell specific, HMG box) JBrowse link 6 72,626,371 72,789,045 RGD:2290270
G Tdgf1 teratocarcinoma-derived growth factor 1 JBrowse link 9 110,939,608 110,946,158 RGD:2290270
G Wnt5a wingless-type MMTV integration site family, member 5A JBrowse link 14 28,505,473 28,527,448 RGD:2290270
anterior/posterior pattern specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acvr2a activin receptor IIA JBrowse link 2 48,814,109 48,903,264 RGD:2290270
G Acvr2b activin receptor IIB JBrowse link 9 119,401,584 119,442,148 RGD:2290270
G Aldh1a2 aldehyde dehydrogenase family 1, subfamily A2 JBrowse link 9 71,215,789 71,296,243 RGD:2290270
G Alx1 ALX homeobox 1 JBrowse link 10 103,007,847 103,029,457 RGD:2290270
G Alx4 aristaless-like homeobox 4 JBrowse link 2 93,642,434 93,681,341 RGD:2290270
G Apc APC, WNT signaling pathway regulator JBrowse link 18 34,220,617 34,322,190 RGD:2290270
G Arc activity regulated cytoskeletal-associated protein JBrowse link 15 74,669,081 74,672,570 RGD:2290270
G Barx1 BarH-like homeobox 1 JBrowse link 13 48,663,036 48,666,507 RGD:2290270
G Bmpr1a bone morphogenetic protein receptor, type 1A JBrowse link 14 34,411,068 34,503,461 RGD:2290270
G Bmpr2 bone morphogenetic protein receptor, type II (serine/threonine kinase) JBrowse link 1 59,764,270 59,878,081 RGD:2290270
G Bptf bromodomain PHD finger transcription factor JBrowse link 11 107,033,081 107,131,922 RGD:2290270
G Btg2 B cell translocation gene 2, anti-proliferative JBrowse link 1 134,074,865 134,079,155 RGD:2290270
G Cdon cell adhesion molecule-related/down-regulated by oncogenes JBrowse link 9 35,421,199 35,507,652 RGD:2290270
G Cdx1 caudal type homeobox 1 JBrowse link 18 61,018,862 61,036,199 RGD:2290270
G Cdx2 caudal type homeobox 2 JBrowse link 5 147,300,900 147,307,249 RGD:2290270
G Cdx4 caudal type homeobox 4 JBrowse link X 103,321,398 103,330,224 RGD:2290270
G Celsr1 cadherin, EGF LAG seven-pass G-type receptor 1 JBrowse link 15 85,898,758 86,034,217 RGD:2290270
G Cer1 cerberus 1, DAN family BMP antagonist JBrowse link 4 82,881,751 82,885,151 RGD:2290270
G Cfc1 cripto, FRL-1, cryptic family 1 JBrowse link 1 34,535,648 34,544,311 RGD:2290270
G Crkl v-crk avian sarcoma virus CT10 oncogene homolog-like JBrowse link 16 17,451,985 17,487,440 RGD:2290270
G Ctnnbip1 catenin beta interacting protein 1 JBrowse link 4 149,518,241 149,566,437 RGD:2290270
G Cyp26a1 cytochrome P450, family 26, subfamily a, polypeptide 1 JBrowse link 19 37,697,732 37,701,536 RGD:2290270
G Cyp26c1 cytochrome P450, family 26, subfamily c, polypeptide 1 JBrowse link 19 37,685,195 37,693,332 RGD:2290270
G Emx2 empty spiracles homeobox 2 JBrowse link 19 59,458,640 59,465,357 RGD:2290270
G Foxa2 forkhead box A2 JBrowse link 2 148,042,877 148,046,969 RGD:2290270
G Foxh1 forkhead box H1 JBrowse link 15 76,667,829 76,671,545 RGD:2290270
G Fuz fuzzy planar cell polarity protein JBrowse link 7 44,896,079 44,900,624 RGD:2290270
G Gdf11 growth differentiation factor 11 JBrowse link 10 128,884,546 128,891,718 RGD:2290270
G Gli2 GLI-Kruppel family member GLI2 JBrowse link 1 118,834,061 119,053,619 RGD:2290270
G Gli3 GLI-Kruppel family member GLI3 JBrowse link 13 15,463,723 15,730,026 RGD:2290270
G Grsf1 G-rich RNA sequence binding factor 1 JBrowse link 5 88,659,233 88,676,171 RGD:2290270
G Hhex hematopoietically expressed homeobox JBrowse link 19 37,434,841 37,440,731 RGD:2290270
G Hipk1 homeodomain interacting protein kinase 1 JBrowse link 3 103,739,815 103,791,894 RGD:2290270
G Hipk2 homeodomain interacting protein kinase 2 JBrowse link 6 38,687,512 38,876,190 RGD:2290270
G Hnf1b HNF1 homeobox B JBrowse link 11 83,850,209 83,905,917 RGD:2290270
G Hoxa1 homeobox A1 JBrowse link 6 52,155,367 52,159,286 RGD:2290270
G Hoxa10 homeobox A10 JBrowse link 6 52,231,197 52,240,854 RGD:2290270
G Hoxa11 homeobox A11 JBrowse link 6 52,242,105 52,245,810 RGD:2290270
G Hoxa2 homeobox A2 JBrowse link 6 52,162,417 52,164,831 RGD:2290270
G Hoxa3 homeobox A3 JBrowse link 6 52,169,062 52,213,067 RGD:2290270
G Hoxa4 homeobox A4 JBrowse link 6 52,189,687 52,191,703 RGD:2290270
G Hoxa5 homeobox A5 JBrowse link 6 52,201,754 52,204,587 RGD:2290270
G Hoxa6 homeobox A6 JBrowse link 6 52,206,365 52,208,624 RGD:2290270
G Hoxa7 homeobox A7 JBrowse link 6 52,215,623 52,218,573 RGD:2290270
G Hoxa9 homeobox A9 JBrowse link 6 52,223,097 52,227,370 RGD:2290270
G Hoxb1 homeobox B1 JBrowse link 11 96,365,746 96,368,254 RGD:2290270
G Hoxb2 homeobox B2 JBrowse link 11 96,351,632 96,354,020 RGD:2290270
G Hoxb3 homeobox B3 JBrowse link 11 96,307,103 96,347,930 RGD:2290270
G Hoxb4 homeobox B4 JBrowse link 11 96,318,267 96,321,638 RGD:2290270
G Hoxb5 homeobox B5 JBrowse link 11 96,303,512 96,306,121 RGD:2290270
G Hoxb6 homeobox B6 JBrowse link 11 96,292,710 96,301,569 RGD:2290270
G Hoxb7 homeobox B7 JBrowse link 11 96,286,646 96,290,163 RGD:2290270
G Hoxb8 homeobox B8 JBrowse link 11 96,279,404 96,285,325 RGD:2290270
G Hoxb9 homeobox B9 JBrowse link 11 96,271,330 96,276,595 RGD:2290270
G Hoxc10 homeobox C10 JBrowse link 15 102,966,796 102,971,898 RGD:2290270
G Hoxc11 homeobox C11 JBrowse link 15 102,954,526 102,956,701 RGD:2290270
G Hoxc13 homeobox C13 JBrowse link 15 102,921,131 102,928,814 RGD:2290270
G Hoxc4 homeobox C4 JBrowse link 15 103,018,099 103,036,856 RGD:2290270
G Hoxc5 homeobox C5 JBrowse link 15 103,014,008 103,017,429 RGD:2290270
G Hoxc6 homeobox C6 JBrowse link 15 102,998,226 103,011,882 RGD:2290270
G Hoxc8 homeobox C8 JBrowse link 15 102,990,539 102,994,254 RGD:2290270
G Hoxc9 homeobox C9 JBrowse link 15 102,977,032 102,984,444 RGD:2290270
G Hoxd10 homeobox D10 JBrowse link 2 74,684,273 74,695,106 RGD:2290270
G Hoxd11 homeobox D11 JBrowse link 2 74,679,558 74,687,016 RGD:2290270
G Hoxd13 homeobox D13 JBrowse link 2 74,668,310 74,671,599 RGD:2290270
G Hoxd3 homeobox D3 JBrowse link 2 74,711,993 74,748,271 RGD:2290270
G Hoxd4 homeobox D4 JBrowse link 2 74,721,978 74,729,160 RGD:2290270
G Hoxd8 homeobox D8 JBrowse link 2 74,704,615 74,707,933 RGD:2290270
G Hoxd9 homeobox D9 JBrowse link 2 74,697,763 74,700,208 RGD:2290270
G Htt huntingtin JBrowse link 5 34,761,736 34,912,534 RGD:2290270
G Ifitm1 interferon induced transmembrane protein 1 JBrowse link 7 140,967,429 140,969,828 RGD:2290270
G Ift88 intraflagellar transport 88 JBrowse link 14 57,424,069 57,517,936 RGD:2290270
G Kif3a kinesin family member 3A JBrowse link 11 53,567,192 53,604,248 RGD:2290270
G Kmt2a lysine (K)-specific methyltransferase 2A JBrowse link 9 44,803,355 44,881,298 RGD:2290270
G Lhx1 LIM homeobox protein 1 JBrowse link 11 84,519,379 84,525,534 RGD:2290270
G Lrp5 low density lipoprotein receptor-related protein 5 JBrowse link 19 3,584,825 3,686,564 RGD:2290270
G Lrp6 low density lipoprotein receptor-related protein 6 JBrowse link 6 134,446,476 134,567,018 RGD:2290270
G Mllt3 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3 JBrowse link 4 87,769,925 88,033,407 RGD:2290270
G Msx1 msh homeobox 1 JBrowse link 5 37,820,491 37,824,585 RGD:2290270
G Msx2 msh homeobox 2 JBrowse link 13 53,466,881 53,472,780 RGD:2290270
G Neurod1 neurogenic differentiation 1 JBrowse link 2 79,452,641 79,456,636 RGD:2290270
G Nodal nodal JBrowse link 10 61,417,972 61,425,337 RGD:2290270
G Nr2f2 nuclear receptor subfamily 2, group F, member 2 JBrowse link 7 70,351,946 70,366,746 RGD:2290270
G Otx1 orthodenticle homeobox 1 JBrowse link 11 21,994,764 22,004,051 RGD:2290270
G Otx2 orthodenticle homeobox 2 JBrowse link 14 48,657,452 48,667,644 RGD:2290270
G Pax6 paired box 6 JBrowse link 2 105,668,896 105,698,410 RGD:2290270
G Pbx1 pre B cell leukemia homeobox 1 JBrowse link 1 168,119,364 168,432,264 RGD:2290270
G Pcgf2 polycomb group ring finger 2 JBrowse link 11 97,688,821 97,701,348 RGD:2290270
G Pcsk5 proprotein convertase subtilisin/kexin type 5 JBrowse link 19 17,432,314 17,837,632 RGD:2290270
G Pds5a PDS5 cohesin associated factor A JBrowse link 5 65,607,777 65,698,163 RGD:2290270
G Rarg retinoic acid receptor, gamma JBrowse link 15 102,234,938 102,257,522 RGD:2290270
G Ring1 ring finger protein 1 JBrowse link 17 34,020,792 34,024,680 RGD:2290270
G Scmh1 sex comb on midleg homolog 1 JBrowse link 4 120,405,281 120,530,199 RGD:2290270
G Sf3b1 splicing factor 3b, subunit 1 JBrowse link 1 54,985,169 55,027,493 RGD:2290270
G Sfrp1 secreted frizzled-related protein 1 JBrowse link 8 23,411,382 23,449,632 RGD:2290270
G Sfrp2 secreted frizzled-related protein 2 JBrowse link 3 83,766,158 83,774,314 RGD:2290270
G Shh sonic hedgehog JBrowse link 5 28,456,840 28,467,101 RGD:2290270
G Smad2 SMAD family member 2 JBrowse link 18 76,241,265 76,311,748 RGD:2290270
G Smad4 SMAD family member 4 JBrowse link 18 73,634,858 73,703,741 RGD:2290270
G Smo smoothened, frizzled class receptor JBrowse link 6 29,735,497 29,761,366 RGD:2290270
G T brachyury, T-box transcription factor T JBrowse link 17 8,422,178 8,442,496 RGD:2290270
G Tbx1 T-box 1 JBrowse link 16 18,581,704 18,590,671 RGD:2290270
G Tcf15 transcription factor 15 JBrowse link 2 152,143,049 152,149,097 RGD:2290270
G Tdgf1 teratocarcinoma-derived growth factor 1 JBrowse link 9 110,939,608 110,946,158 RGD:2290270
G Tgfbr1 transforming growth factor, beta receptor I JBrowse link 4 47,353,222 47,414,926 RGD:2290270
G Tshz1 teashirt zinc finger family member 1 JBrowse link 18 84,011,627 84,086,562 RGD:2290270
G Tulp3 tubby-like protein 3 JBrowse link 6 128,321,161 128,355,873 RGD:2290270
G Vangl2 VANGL planar cell polarity 2 JBrowse link 1 172,000,960 172,027,314 RGD:2290270
G Wnt3 wingless-type MMTV integration site family, member 3 JBrowse link 11 103,774,175 103,818,021 RGD:2290270
G Wnt3a wingless-type MMTV integration site family, member 3A JBrowse link 11 59,248,036 59,290,751 RGD:2290270
G Wnt5a wingless-type MMTV integration site family, member 5A JBrowse link 14 28,505,473 28,527,448 RGD:2290270
G Yy1 YY1 transcription factor JBrowse link 12 108,793,269 108,816,632 RGD:2290270
G Zbtb16 zinc finger and BTB domain containing 16 JBrowse link 9 48,651,797 48,836,381 RGD:2290270
G Zic3 zinc finger protein of the cerebellum 3 JBrowse link X 58,021,464 58,041,735 RGD:2290270
axis elongation involved in somitogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lrp6 low density lipoprotein receptor-related protein 6 JBrowse link 6 134,446,476 134,567,018 RGD:2290270
G Med12 mediator complex subunit 12 JBrowse link X 101,274,091 101,298,934 RGD:2290270
G Wnt3a wingless-type MMTV integration site family, member 3A JBrowse link 11 59,248,036 59,290,751 RGD:2290270
axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apc APC, WNT signaling pathway regulator JBrowse link 18 34,220,617 34,322,190 RGD:2290270
G Ripply2 ripply transcriptional repressor 2 JBrowse link 9 87,015,376 87,020,441 RGD:2290270
G Wnt6 wingless-type MMTV integration site family, member 6 JBrowse link 1 74,754,342 74,785,322 RGD:2290270
BMP signaling pathway involved in heart induction term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp2 bone morphogenetic protein 2 JBrowse link 2 133,552,159 133,562,896 RGD:2290270
G Bmp4 bone morphogenetic protein 4 JBrowse link 14 46,383,525 46,390,669 RGD:2290270
G Pou5f1 POU domain, class 5, transcription factor 1 JBrowse link 17 35,506,032 35,510,777 RGD:2290270
BMP signaling pathway involved in renal system segmentation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp4 bone morphogenetic protein 4 JBrowse link 14 46,383,525 46,390,669 RGD:2290270
BMP signaling pathway involved in spinal cord dorsal/ventral patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chrd chordin JBrowse link 16 20,733,050 20,742,384 RGD:2290270
brain segmentation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Egr2 early growth response 2 JBrowse link 10 67,534,453 67,547,493 RGD:2290270
G Hoxa2 homeobox A2 JBrowse link 6 52,162,417 52,164,831 RGD:2290270
G Mafb v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian) JBrowse link 2 160,363,677 160,367,065 RGD:2290270
cerebral cortex regionalization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adgrg1 adhesion G protein-coupled receptor G1 JBrowse link 8 94,974,756 95,014,208 RGD:2290270
G Bhlhe22 basic helix-loop-helix family, member e22 JBrowse link 3 18,054,325 18,057,514 RGD:2290270
G Dmrta2 doublesex and mab-3 related transcription factor like family A2 JBrowse link 4 109,977,782 109,983,699 RGD:2290270
G Emx1 empty spiracles homeobox 1 JBrowse link 6 85,187,931 85,204,463 RGD:2290270
G Emx2 empty spiracles homeobox 2 JBrowse link 19 59,458,640 59,465,357 RGD:2290270
G Eomes eomesodermin JBrowse link 9 118,478,189 118,486,132 RGD:2290270
G Nr2f1 nuclear receptor subfamily 2, group F, member 1 JBrowse link 13 78,188,971 78,198,982 RGD:2290270
G Pax6 paired box 6 JBrowse link 2 105,668,896 105,698,410 RGD:2290270
G Tra2b transformer 2 beta JBrowse link 16 22,245,741 22,266,000 RGD:2290270
compartment pattern specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dll1 delta like canonical Notch ligand 1 JBrowse link 17 15,367,354 15,376,048 RGD:2290270
G Dll3 delta like canonical Notch ligand 3 JBrowse link 7 28,293,555 28,301,785 RGD:2290270
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase JBrowse link 5 140,607,341 140,615,545 RGD:2290270
G Notch1 notch 1 JBrowse link 2 26,457,902 26,503,822 RGD:2290270
convergent extension involved in somitogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sfrp1 secreted frizzled-related protein 1 JBrowse link 8 23,411,382 23,449,632 RGD:2290270
detection of nodal flow term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pkd1l1 polycystic kidney disease 1 like 1 JBrowse link 11 8,825,696 8,974,709 RGD:2290270
G Pkd2 polycystic kidney disease 2 JBrowse link 5 104,453,995 104,505,819 RGD:2290270
determination of bilateral symmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aldh1a2 aldehyde dehydrogenase family 1, subfamily A2 JBrowse link 9 71,215,789 71,296,243 RGD:2290270
determination of digestive tract left/right asymmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccdc103 coiled-coil domain containing 103 JBrowse link 11 102,881,244 102,885,215 RGD:2290270
G Ccdc39 coiled-coil domain containing 39 JBrowse link 3 33,810,757 33,844,325 RGD:2290270
G Ccdc40 coiled-coil domain containing 40 JBrowse link 11 119,228,572 119,265,248 RGD:2290270
G Dnaaf1 dynein, axonemal assembly factor 1 JBrowse link 8 119,575,235 119,598,454 RGD:2290270
G Megf8 multiple EGF-like-domains 8 JBrowse link 7 25,316,736 25,365,917 RGD:2290270
G Zic3 zinc finger protein of the cerebellum 3 JBrowse link X 58,021,464 58,041,735 RGD:2290270
determination of dorsal identity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cer1 cerberus 1, DAN family BMP antagonist JBrowse link 4 82,881,751 82,885,151 RGD:2290270
G Grem1 gremlin 1, DAN family BMP antagonist JBrowse link 2 113,748,674 113,758,785 RGD:2290270
G Grem2 gremlin 2, DAN family BMP antagonist JBrowse link 1 174,833,785 174,921,915 RGD:2290270
G Map3k4 mitogen-activated protein kinase kinase kinase 4 JBrowse link 17 12,227,621 12,318,804 RGD:2290270
G Mapk8 mitogen-activated protein kinase 8 JBrowse link 14 33,377,898 33,447,212 RGD:2290270
G Nbl1 NBL1, DAN family BMP antagonist JBrowse link 4 139,082,291 139,092,980 RGD:2290270
determination of heart left/right asymmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccdc151 coiled-coil domain containing 151 JBrowse link 9 21,989,871 22,002,972 RGD:2290270
G Cer1 cerberus 1, DAN family BMP antagonist JBrowse link 4 82,881,751 82,885,151 RGD:2290270
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 JBrowse link 10 17,723,228 17,725,674 RGD:2290270
G Dand5 DAN domain family member 5, BMP antagonist JBrowse link 8 84,815,405 84,832,265 RGD:2290270
G Dnah11 dynein, axonemal, heavy chain 11 JBrowse link 12 117,877,982 118,199,043 RGD:2290270
G Hand1 heart and neural crest derivatives expressed 1 JBrowse link 11 57,828,713 57,832,147 RGD:2290270
G Hand2 heart and neural crest derivatives expressed 2 JBrowse link 8 57,320,983 57,324,517 RGD:2290270
G Megf8 multiple EGF-like-domains 8 JBrowse link 7 25,316,736 25,365,917 RGD:2290270
G Mmp21 matrix metallopeptidase 21 JBrowse link 7 133,674,270 133,680,061 RGD:2290270
G Rbpj recombination signal binding protein for immunoglobulin kappa J region JBrowse link 5 53,466,115 53,657,445 RGD:2290270
G T brachyury, T-box transcription factor T JBrowse link 17 8,422,178 8,442,496 RGD:2290270
determination of intestine left/right asymmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nphp3 nephronophthisis 3 (adolescent) JBrowse link 9 104,002,544 104,043,811 RGD:2290270
determination of left/right asymmetry in lateral mesoderm term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dand5 DAN domain family member 5, BMP antagonist JBrowse link 8 84,815,405 84,832,265 RGD:2290270
G Shh sonic hedgehog JBrowse link 5 28,456,840 28,467,101 RGD:2290270
G Smo smoothened, frizzled class receptor JBrowse link 6 29,735,497 29,761,366 RGD:2290270
determination of left/right asymmetry in nervous system term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnah11 dynein, axonemal, heavy chain 11 JBrowse link 12 117,877,982 118,199,043 RGD:2290270
G Zic3 zinc finger protein of the cerebellum 3 JBrowse link X 58,021,464 58,041,735 RGD:2290270
determination of left/right symmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G 1700007K13Rik RIKEN cDNA 1700007K13 gene JBrowse link 2 28,462,001 28,466,324 RGD:2290270
G Acvr1 activin A receptor, type 1 JBrowse link 2 58,446,438 58,566,828 RGD:2290270
G Acvr1c activin A receptor, type IC JBrowse link 2 58,267,453 58,357,898 RGD:2290270
G Acvr2a activin receptor IIA JBrowse link 2 48,814,109 48,903,264 RGD:2290270
G Acvr2b activin receptor IIB JBrowse link 9 119,401,584 119,442,148 RGD:2290270
G Alg5 asparagine-linked glycosylation 5 (dolichyl-phosphate beta-glucosyltransferase) JBrowse link 3 54,735,539 54,749,795 RGD:2290270
G Anks6 ankyrin repeat and sterile alpha motif domain containing 6 JBrowse link 4 47,015,365 47,057,335 RGD:2290270
G Ap1b1 adaptor protein complex AP-1, beta 1 subunit JBrowse link 11 4,947,521 5,042,794 RGD:2290270
G Arl13b ADP-ribosylation factor-like 13B JBrowse link 16 62,793,308 62,847,053 RGD:2290270
G Armc4 armadillo repeat containing 4 JBrowse link 18 7,088,233 7,298,304 RGD:2290270
G Bicc1 BicC family RNA binding protein 1 JBrowse link 10 70,922,837 71,159,690 RGD:2290270
G Cc2d2a coiled-coil and C2 domain containing 2A JBrowse link 5 43,662,373 43,740,975 RGD:2290270
G Ccdc151 coiled-coil domain containing 151 JBrowse link 9 21,989,871 22,002,972 RGD:2290270
G Ccdc39 coiled-coil domain containing 39 JBrowse link 3 33,810,757 33,844,325 RGD:2290270
G Cep290 centrosomal protein 290 JBrowse link 10 100,487,548 100,573,665 RGD:2290270
G Cfap53 cilia and flagella associated protein 53 JBrowse link 18 74,283,100 74,359,984 RGD:2290270
G Cfc1 cripto, FRL-1, cryptic family 1 JBrowse link 1 34,535,648 34,544,311 RGD:2290270
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 JBrowse link 10 17,723,228 17,725,674 RGD:2290270
G Daam2 dishevelled associated activator of morphogenesis 2 JBrowse link 17 49,456,022 49,564,494 RGD:2290270
G Dand5 DAN domain family member 5, BMP antagonist JBrowse link 8 84,815,405 84,832,265 RGD:2290270
G Daw1 dynein assembly factor with WDR repeat domains 1 JBrowse link 1 83,159,742 83,210,574 RGD:2290270
G Disp1 dispatched RND transporter family member 1 JBrowse link 1 183,086,264 183,221,535 RGD:2290270
G Dll1 delta like canonical Notch ligand 1 JBrowse link 17 15,367,354 15,376,048 RGD:2290270
G Dnaaf3 dynein, axonemal assembly factor 3 JBrowse link 7 4,522,948 4,532,488 RGD:2290270
G Dnaaf4 dynein axonemal assembly factor 4 JBrowse link 9 72,957,366 72,973,689 RGD:2290270
G Dnah11 dynein, axonemal, heavy chain 11 JBrowse link 12 117,877,982 118,199,043 RGD:2290270
G Dnah5 dynein, axonemal, heavy chain 5 JBrowse link 15 28,154,854 28,472,045 RGD:2290270
G Dnaic1 dynein, axonemal, intermediate chain 1 JBrowse link 4 41,569,698 41,638,158 RGD:2290270
G Dnaic2 dynein, axonemal, intermediate chain 2 JBrowse link 11 114,722,209 114,757,889 RGD:2290270
G Dpcd deleted in primary ciliary dyskinesia JBrowse link 19 45,560,590 45,578,287 RGD:2290270
G Drc1 dynein regulatory complex subunit 1 JBrowse link 5 30,281,143 30,366,708 RGD:2290270
G Dync2h1 dynein cytoplasmic 2 heavy chain 1 JBrowse link 9 6,928,503 7,177,282 RGD:2290270
G Dync2li1 dynein cytoplasmic 2 light intermediate chain 1 JBrowse link 17 84,626,496 84,655,568 RGD:2290270
G Fgf10 fibroblast growth factor 10 JBrowse link 13 118,714,699 118,792,573 RGD:2290270
G Fgf8 fibroblast growth factor 8 JBrowse link 19 45,736,798 45,742,938 RGD:2290270
G Foxf1 forkhead box F1 JBrowse link 8 121,084,386 121,088,154 RGD:2290270
G Foxh1 forkhead box H1 JBrowse link 15 76,667,829 76,671,545 RGD:2290270
G Foxj1 forkhead box J1 JBrowse link 11 116,330,704 116,335,516 RGD:2290270
G Gas8 growth arrest specific 8 JBrowse link 8 123,518,835 123,536,657 RGD:2290270
G Gm572 predicted gene 572 JBrowse link 4 148,643,317 148,676,969 RGD:2290270
G Ift140 intraflagellar transport 140 JBrowse link 17 25,016,082 25,099,499 RGD:2290270
G Ift172 intraflagellar transport 172 JBrowse link 5 31,253,279 31,291,114 RGD:2290270
G Ift52 intraflagellar transport 52 JBrowse link 2 163,017,293 163,046,155 RGD:2290270
G Ift74 intraflagellar transport 74 JBrowse link 4 94,603,261 94,693,233 RGD:2290270
G Ift88 intraflagellar transport 88 JBrowse link 14 57,424,069 57,517,936 RGD:2290270
G Kif3a kinesin family member 3A JBrowse link 11 53,567,192 53,604,248 RGD:2290270
G Lefty1 left right determination factor 1 JBrowse link 1 180,935,039 180,938,401 RGD:2290270
G Megf8 multiple EGF-like-domains 8 JBrowse link 7 25,316,736 25,365,917 RGD:2290270
G Mks1 Meckel syndrome, type 1 JBrowse link 11 87,852,929 87,863,679 RGD:2290270
G Mmp21 matrix metallopeptidase 21 JBrowse link 7 133,674,270 133,680,061 RGD:2290270
G Nat8f5 N-acetyltransferase 8 (GCN5-related) family member 5 JBrowse link 6 85,817,218 85,820,972 RGD:2290270
G Nek8 NIMA (never in mitosis gene a)-related expressed kinase 8 JBrowse link 11 78,166,106 78,176,699 RGD:2290270
G Nkx3-2 NK3 homeobox 2 JBrowse link 5 41,761,483 41,764,220 RGD:2290270
G Nme7 NME/NM23 family member 7 JBrowse link 1 164,307,662 164,437,300 RGD:2290270
G Nodal nodal JBrowse link 10 61,417,972 61,425,337 RGD:2290270
G Notch1 notch 1 JBrowse link 2 26,457,902 26,503,822 RGD:2290270
G Notch2 notch 2 JBrowse link 3 98,013,538 98,150,367 RGD:2290270
G Noto notochord homeobox JBrowse link 6 85,423,886 85,428,877 RGD:2290270
G Nphp3 nephronophthisis 3 (adolescent) JBrowse link 9 104,002,544 104,043,811 RGD:2290270
G Pcsk5 proprotein convertase subtilisin/kexin type 5 JBrowse link 19 17,432,314 17,837,632 RGD:2290270
G Pcsk6 proprotein convertase subtilisin/kexin type 6 JBrowse link 7 65,862,136 66,050,386 RGD:2290270
G Pitx2 paired-like homeodomain transcription factor 2 JBrowse link 3 129,199,878 129,219,594 RGD:2290270
G Pkd1l1 polycystic kidney disease 1 like 1 JBrowse link 11 8,825,696 8,974,709 RGD:2290270
G Pkd2 polycystic kidney disease 2 JBrowse link 5 104,453,995 104,505,819 RGD:2290270
G Pskh1 protein serine kinase H1 JBrowse link 8 105,900,474 105,931,802 RGD:2290270
G Rfx3 regulatory factor X, 3 (influences HLA class II expression) JBrowse link 19 27,761,721 28,011,693 RGD:2290270
G Ripply2 ripply transcriptional repressor 2 JBrowse link 9 87,015,376 87,020,441 RGD:2290270
G Rpgrip1l Rpgrip1-like JBrowse link 8 91,217,030 91,313,354 RGD:2290270
G Rttn rotatin JBrowse link 18 88,971,735 89,131,014 RGD:2290270
G Shh sonic hedgehog JBrowse link 5 28,456,840 28,467,101 RGD:2290270
G Smo smoothened, frizzled class receptor JBrowse link 6 29,735,497 29,761,366 RGD:2290270
G Stil Scl/Tal1 interrupting locus JBrowse link 4 115,000,108 115,043,203 RGD:2290270
G Sufu SUFU negative regulator of hedgehog signaling JBrowse link 19 46,396,896 46,488,804 RGD:2290270
G Tbc1d32 TBC1 domain family, member 32 JBrowse link 10 56,014,293 56,229,457 RGD:2290270
G Tbx1 T-box 1 JBrowse link 16 18,581,704 18,590,671 RGD:2290270
G Tdgf1 teratocarcinoma-derived growth factor 1 JBrowse link 9 110,939,608 110,946,158 RGD:2290270
G Tgif1 TGFB-induced factor homeobox 1 JBrowse link 17 70,844,205 70,853,532 RGD:2290270
G Tmem67 transmembrane protein 67 JBrowse link 4 12,039,355 12,090,020 RGD:2290270
G Wnt3a wingless-type MMTV integration site family, member 3A JBrowse link 11 59,248,036 59,290,751 RGD:2290270
G Wnt5a wingless-type MMTV integration site family, member 5A JBrowse link 14 28,505,473 28,527,448 RGD:2290270
G Zic3 zinc finger protein of the cerebellum 3 JBrowse link X 58,021,464 58,041,735 RGD:2290270
determination of liver left/right asymmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccdc39 coiled-coil domain containing 39 JBrowse link 3 33,810,757 33,844,325 RGD:2290270
G Ccdc40 coiled-coil domain containing 40 JBrowse link 11 119,228,572 119,265,248 RGD:2290270
G Dnaaf1 dynein, axonemal assembly factor 1 JBrowse link 8 119,575,235 119,598,454 RGD:2290270
G Nphp3 nephronophthisis 3 (adolescent) JBrowse link 9 104,002,544 104,043,811 RGD:2290270
G Pkd2 polycystic kidney disease 2 JBrowse link 5 104,453,995 104,505,819 RGD:2290270
G Zic3 zinc finger protein of the cerebellum 3 JBrowse link X 58,021,464 58,041,735 RGD:2290270
determination of pancreatic left/right asymmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccdc39 coiled-coil domain containing 39 JBrowse link 3 33,810,757 33,844,325 RGD:2290270
G Ccdc40 coiled-coil domain containing 40 JBrowse link 11 119,228,572 119,265,248 RGD:2290270
G Dnaaf1 dynein, axonemal assembly factor 1 JBrowse link 8 119,575,235 119,598,454 RGD:2290270
G Nphp3 nephronophthisis 3 (adolescent) JBrowse link 9 104,002,544 104,043,811 RGD:2290270
G Zic3 zinc finger protein of the cerebellum 3 JBrowse link X 58,021,464 58,041,735 RGD:2290270
determination of stomach left/right asymmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nphp3 nephronophthisis 3 (adolescent) JBrowse link 9 104,002,544 104,043,811 RGD:2290270
determination of ventral identity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aida axin interactor, dorsalization associated JBrowse link 1 183,297,060 183,324,501 RGD:2290270
dorsal/ventral axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Axin1 axin 1 JBrowse link 17 26,131,213 26,195,811 RGD:2290270
G Bmpr1a bone morphogenetic protein receptor, type 1A JBrowse link 14 34,411,068 34,503,461 RGD:2290270
G Ctnnb1 catenin (cadherin associated protein), beta 1 JBrowse link 9 120,933,400 120,960,507 RGD:2290270
G Lrp6 low density lipoprotein receptor-related protein 6 JBrowse link 6 134,446,476 134,567,018 RGD:2290270
G Mdfi MyoD family inhibitor JBrowse link 17 47,815,328 47,834,691 RGD:2290270
G Pax6 paired box 6 JBrowse link 2 105,668,896 105,698,410 RGD:2290270
G Senp2 SUMO/sentrin specific peptidase 2 JBrowse link 16 22,009,427 22,049,269 RGD:2290270
G Sfrp1 secreted frizzled-related protein 1 JBrowse link 8 23,411,382 23,449,632 RGD:2290270
G Vax2 ventral anterior homeobox 2 JBrowse link 6 83,711,264 83,738,304 RGD:2290270
G Wnt3 wingless-type MMTV integration site family, member 3 JBrowse link 11 103,774,175 103,818,021 RGD:2290270
dorsal/ventral neural tube patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp4 bone morphogenetic protein 4 JBrowse link 14 46,383,525 46,390,669 RGD:2290270
G Fkbp8 FK506 binding protein 8 JBrowse link 8 70,527,714 70,535,328 RGD:2290270
G Foxa1 forkhead box A1 JBrowse link 12 57,540,628 57,548,027 RGD:2290270
G Foxa2 forkhead box A2 JBrowse link 2 148,042,877 148,046,969 RGD:2290270
G Gas1 growth arrest specific 1 JBrowse link 13 60,174,405 60,177,535 RGD:2290270
G Gli2 GLI-Kruppel family member GLI2 JBrowse link 1 118,834,061 119,053,619 RGD:2290270
G Gsc goosecoid homeobox JBrowse link 12 104,471,209 104,473,236 RGD:2290270
G Kif3a kinesin family member 3A JBrowse link 11 53,567,192 53,604,248 RGD:2290270
G Mnx1 motor neuron and pancreas homeobox 1 JBrowse link 5 29,473,823 29,478,470 RGD:2290270
G Pax7 paired box 7 JBrowse link 4 139,737,059 139,833,026 RGD:2290270
G Psen1 presenilin 1 JBrowse link 12 83,688,145 83,738,446 RGD:2290270
G Psen2 presenilin 2 JBrowse link 1 180,227,004 180,263,478 RGD:2290270
G Ptch1 patched 1 JBrowse link 13 63,508,328 63,573,616 RGD:2290270
G Rab23 RAB23, member RAS oncogene family JBrowse link 1 33,719,888 33,742,564 RGD:2290270
G Shh sonic hedgehog JBrowse link 5 28,456,840 28,467,101 RGD:2290270
G Smo smoothened, frizzled class receptor JBrowse link 6 29,735,497 29,761,366 RGD:2290270
G Tctn1 tectonic family member 1 JBrowse link 5 122,239,495 122,264,492 RGD:2290270
G Tulp3 tubby-like protein 3 JBrowse link 6 128,321,161 128,355,873 RGD:2290270
G Wnt3a wingless-type MMTV integration site family, member 3A JBrowse link 11 59,248,036 59,290,751 RGD:2290270
dorsal/ventral pattern formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aida axin interactor, dorsalization associated JBrowse link 1 183,297,060 183,324,501 RGD:2290270
G Apc APC, WNT signaling pathway regulator JBrowse link 18 34,220,617 34,322,190 RGD:2290270
G Arl13b ADP-ribosylation factor-like 13B JBrowse link 16 62,793,308 62,847,053 RGD:2290270
G Axin1 axin 1 JBrowse link 17 26,131,213 26,195,811 RGD:2290270
G Bmpr1a bone morphogenetic protein receptor, type 1A JBrowse link 14 34,411,068 34,503,461 RGD:2290270
G Bmpr1b bone morphogenetic protein receptor, type 1B JBrowse link 3 141,837,136 142,169,594 RGD:2290270
G Chrd chordin JBrowse link 16 20,733,050 20,742,384 RGD:2290270
G Ctnnb1 catenin (cadherin associated protein), beta 1 JBrowse link 9 120,933,400 120,960,507 RGD:2290270
G Disp1 dispatched RND transporter family member 1 JBrowse link 1 183,086,264 183,221,535 RGD:2290270
G Dync2h1 dynein cytoplasmic 2 heavy chain 1 JBrowse link 9 6,928,503 7,177,282 RGD:2290270
G Edn1 endothelin 1 JBrowse link 13 42,301,476 42,307,990 RGD:2290270
G En1 engrailed 1 JBrowse link 1 120,602,487 120,607,991 RGD:2290270
G Fkbp8 FK506 binding protein 8 JBrowse link 8 70,527,714 70,535,328 RGD:2290270
G Foxa2 forkhead box A2 JBrowse link 2 148,042,877 148,046,969 RGD:2290270
G Foxg1 forkhead box G1 JBrowse link 12 49,382,883 49,386,867 RGD:2290270
G Gas1 growth arrest specific 1 JBrowse link 13 60,174,405 60,177,535 RGD:2290270
G Gli1 GLI-Kruppel family member GLI1 JBrowse link 10 127,329,882 127,341,579 RGD:2290270
G Gli2 GLI-Kruppel family member GLI2 JBrowse link 1 118,834,061 119,053,619 RGD:2290270
G Gli3 GLI-Kruppel family member GLI3 JBrowse link 13 15,463,723 15,730,026 RGD:2290270
G Hhip Hedgehog-interacting protein JBrowse link 8 79,965,850 80,058,069 RGD:2290270
G Hoxa11 homeobox A11 JBrowse link 6 52,242,105 52,245,810 RGD:2290270
G Hoxa2 homeobox A2 JBrowse link 6 52,162,417 52,164,831 RGD:2290270
G Hoxb2 homeobox B2 JBrowse link 11 96,351,632 96,354,020 RGD:2290270
G Hoxd11 homeobox D11 JBrowse link 2 74,679,558 74,687,016 RGD:2290270
G Ift122 intraflagellar transport 122 JBrowse link 6 115,853,455 115,926,699 RGD:2290270
G Ift172 intraflagellar transport 172 JBrowse link 5 31,253,279 31,291,114 RGD:2290270
G Ift52 intraflagellar transport 52 JBrowse link 2 163,017,293 163,046,155 RGD:2290270
G Ift88 intraflagellar transport 88 JBrowse link 14 57,424,069 57,517,936 RGD:2290270
G Kif3a kinesin family member 3A JBrowse link 11 53,567,192 53,604,248 RGD:2290270
G Lhx1 LIM homeobox protein 1 JBrowse link 11 84,519,379 84,525,534 RGD:2290270
G Lhx2 LIM homeobox protein 2 JBrowse link 2 38,339,281 38,369,737 RGD:2290270
G Lhx3 LIM homeobox protein 3 JBrowse link 2 26,200,212 26,208,249 RGD:2290270
G Lmx1b LIM homeobox transcription factor 1 beta JBrowse link 2 33,560,965 33,640,973 RGD:2290270
G Lrp4 low density lipoprotein receptor-related protein 4 JBrowse link 2 91,457,471 91,513,901 RGD:2290270
G Nog noggin JBrowse link 11 89,300,638 89,302,559 RGD:2290270
G Noto notochord homeobox JBrowse link 6 85,423,886 85,428,877 RGD:2290270
G Otx2 orthodenticle homeobox 2 JBrowse link 14 48,657,452 48,667,644 RGD:2290270
G Ovol2 ovo like zinc finger 2 JBrowse link 2 144,305,175 144,332,080 RGD:2290270
G Pax6 paired box 6 JBrowse link 2 105,668,896 105,698,410 RGD:2290270
G Prop1 paired like homeodomain factor 1 JBrowse link 11 50,950,806 50,953,632 RGD:2290270
G Ptch1 patched 1 JBrowse link 13 63,508,328 63,573,616 RGD:2290270
G Shh sonic hedgehog JBrowse link 5 28,456,840 28,467,101 RGD:2290270
G Smo smoothened, frizzled class receptor JBrowse link 6 29,735,497 29,761,366 RGD:2290270
G Sp8 trans-acting transcription factor 8 JBrowse link 12 118,845,353 118,852,578 RGD:2290270
G Tbx20 T-box 20 JBrowse link 9 24,720,812 24,774,303 RGD:2290270
G Tgif1 TGFB-induced factor homeobox 1 JBrowse link 17 70,844,205 70,853,532 RGD:2290270
G Wnt7a wingless-type MMTV integration site family, member 7A JBrowse link 6 91,363,983 91,411,369 RGD:2290270
embryonic axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 JBrowse link X 102,247,378 102,252,181 RGD:2290270
G Cobl cordon-bleu WH2 repeat JBrowse link 11 12,236,676 12,464,960 RGD:2290270
G Ctnnb1 catenin (cadherin associated protein), beta 1 JBrowse link 9 120,933,400 120,960,507 RGD:2290270
G Frat1 frequently rearranged in advanced T cell lymphomas JBrowse link 19 41,829,970 41,832,583 RGD:2290270
G Fzd5 frizzled class receptor 5 JBrowse link 1 64,730,558 64,737,750 RGD:2290270
G Peg12 paternally expressed 12 JBrowse link 7 62,461,871 62,464,510 RGD:2290270
G Stil Scl/Tal1 interrupting locus JBrowse link 4 115,000,108 115,043,203 RGD:2290270
G Wnt1 wingless-type MMTV integration site family, member 1 JBrowse link 15 98,789,857 98,793,830 RGD:2290270
G Wnt7a wingless-type MMTV integration site family, member 7A JBrowse link 6 91,363,983 91,411,369 RGD:2290270
embryonic heart tube anterior/posterior pattern specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp2 bone morphogenetic protein 2 JBrowse link 2 133,552,159 133,562,896 RGD:2290270
G Foxh1 forkhead box H1 JBrowse link 15 76,667,829 76,671,545 RGD:2290270
G Gata4 GATA binding protein 4 JBrowse link 14 63,198,914 63,271,715 RGD:2290270
embryonic heart tube left/right pattern formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 JBrowse link 10 17,723,228 17,725,674 RGD:2290270
G Ift122 intraflagellar transport 122 JBrowse link 6 115,853,455 115,926,699 RGD:2290270
G Invs inversin JBrowse link 4 48,279,760 48,431,956 RGD:2290270
G Megf8 multiple EGF-like-domains 8 JBrowse link 7 25,316,736 25,365,917 RGD:2290270
G Nkx2-5 NK2 homeobox 5 JBrowse link 17 26,838,664 26,844,995 RGD:2290270
embryonic pattern specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp7 bone morphogenetic protein 7 JBrowse link 2 172,868,012 172,940,321 RGD:2290270
G Disp1 dispatched RND transporter family member 1 JBrowse link 1 183,086,264 183,221,535 RGD:2290270
G Efnb1 ephrin B1 JBrowse link X 99,136,061 99,149,022 RGD:2290270
G Erbb4 erb-b2 receptor tyrosine kinase 4 JBrowse link 1 68,031,884 69,110,787 RGD:2290270
G Fgf10 fibroblast growth factor 10 JBrowse link 13 118,714,699 118,792,573 RGD:2290270
G Fgfr2 fibroblast growth factor receptor 2 JBrowse link 7 130,162,451 130,266,944 RGD:2290270
G Ihh Indian hedgehog JBrowse link 1 74,945,315 74,951,672 RGD:2290270
G Lhx1 LIM homeobox protein 1 JBrowse link 11 84,519,379 84,525,534 RGD:2290270
G Lrp6 low density lipoprotein receptor-related protein 6 JBrowse link 6 134,446,476 134,567,018 RGD:2290270
G Nanog Nanog homeobox JBrowse link 6 122,706,483 122,714,633 RGD:2290270
G Nodal nodal JBrowse link 10 61,417,972 61,425,337 RGD:2290270
G Noto notochord homeobox JBrowse link 6 85,423,886 85,428,877 RGD:2290270
G Ooep oocyte expressed protein JBrowse link 9 78,376,903 78,378,588 RGD:2290270
G Pgap1 post-GPI attachment to proteins 1 JBrowse link 1 54,473,000 54,557,684 RGD:2290270
G Ripply1 ripply transcriptional repressor 1 JBrowse link X 139,779,681 139,782,353 RGD:2290270
G Ripply2 ripply transcriptional repressor 2 JBrowse link 9 87,015,376 87,020,441 RGD:2290270
G Ripply3 ripply transcriptional repressor 3 JBrowse link 16 94,328,422 94,336,935 RGD:2290270
G Satb2 special AT-rich sequence binding protein 2 JBrowse link 1 56,793,981 56,980,448 RGD:2290270
G Sim2 single-minded family bHLH transcription factor 2 JBrowse link 16 94,085,191 94,127,032 RGD:2290270
G Smad2 SMAD family member 2 JBrowse link 18 76,241,265 76,311,748 RGD:2290270
G Smad3 SMAD family member 3 JBrowse link 9 63,646,766 63,757,994 RGD:2290270
G Tfap2a transcription factor AP-2, alpha JBrowse link 13 40,715,302 40,738,237 RGD:2290270
G Zbtb16 zinc finger and BTB domain containing 16 JBrowse link 9 48,651,797 48,836,381 RGD:2290270
epiblast cell-extraembryonic ectoderm cell signaling involved in anterior/posterior axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nodal nodal JBrowse link 10 61,417,972 61,425,337 RGD:2290270
epithelial cilium movement involved in determination of left/right asymmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccdc39 coiled-coil domain containing 39 JBrowse link 3 33,810,757 33,844,325 RGD:2290270
G Ccdc40 coiled-coil domain containing 40 JBrowse link 11 119,228,572 119,265,248 RGD:2290270
G Dnah11 dynein, axonemal, heavy chain 11 JBrowse link 12 117,877,982 118,199,043 RGD:2290270
G Invs inversin JBrowse link 4 48,279,760 48,431,956 RGD:2290270
G Lrrc6 leucine rich repeat containing 6 (testis) JBrowse link 15 66,379,858 66,500,910 RGD:2290270
G Megf8 multiple EGF-like-domains 8 JBrowse link 7 25,316,736 25,365,917 RGD:2290270
G Ofd1 OFD1, centriole and centriolar satellite protein JBrowse link X 166,390,033 166,440,704 RGD:2290270
G Rfx3 regulatory factor X, 3 (influences HLA class II expression) JBrowse link 19 27,761,721 28,011,693 RGD:2290270
establishment of anatomical structure orientation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ttc8 tetratricopeptide repeat domain 8 JBrowse link 12 98,920,574 98,983,250 RGD:2290270
establishment of animal organ orientation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Wnt8a wingless-type MMTV integration site family, member 8A JBrowse link 18 34,542,328 34,548,061 RGD:2290270
fibroblast growth factor receptor signaling pathway involved in mammary gland specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fgf10 fibroblast growth factor 10 JBrowse link 13 118,714,699 118,792,573 RGD:2290270
G Fgfr2 fibroblast growth factor receptor 2 JBrowse link 7 130,162,451 130,266,944 RGD:2290270
fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nog noggin JBrowse link 11 89,300,638 89,302,559 RGD:2290270
forebrain anterior/posterior pattern specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fezf1 Fez family zinc finger 1 JBrowse link 6 23,245,044 23,252,463 RGD:2290270
G Fezf2 Fez family zinc finger 2 JBrowse link 14 12,341,892 12,345,865 RGD:2290270
G Six3 sine oculis-related homeobox 3 JBrowse link 17 85,613,608 85,626,191 RGD:2290270
G Wnt1 wingless-type MMTV integration site family, member 1 JBrowse link 15 98,789,857 98,793,830 RGD:2290270
forebrain dorsal/ventral pattern formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fgf8 fibroblast growth factor 8 JBrowse link 19 45,736,798 45,742,938 RGD:2290270
G Gli3 GLI-Kruppel family member GLI3 JBrowse link 13 15,463,723 15,730,026 RGD:2290270
G Gsx2 GS homeobox 2 JBrowse link 5 75,075,601 75,077,893 RGD:2290270
G Nkx2-1 NK2 homeobox 1 JBrowse link 12 56,531,935 56,536,908 RGD:2290270
G Pax6 paired box 6 JBrowse link 2 105,668,896 105,698,410 RGD:2290270
G Six3 sine oculis-related homeobox 3 JBrowse link 17 85,613,608 85,626,191 RGD:2290270
G Ttc21b tetratricopeptide repeat domain 21B JBrowse link 2 66,183,787 66,256,646 RGD:2290270
forebrain regionalization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lhx1 LIM homeobox protein 1 JBrowse link 11 84,519,379 84,525,534 RGD:2290270
G Pgap1 post-GPI attachment to proteins 1 JBrowse link 1 54,473,000 54,557,684 RGD:2290270
G Shh sonic hedgehog JBrowse link 5 28,456,840 28,467,101 RGD:2290270
G Wnt2b wingless-type MMTV integration site family, member 2B JBrowse link 3 104,944,805 104,961,709 RGD:2290270
G Wnt7b wingless-type MMTV integration site family, member 7B JBrowse link 15 85,535,437 85,581,821 RGD:2290270
forebrain-midbrain boundary formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pax6 paired box 6 JBrowse link 2 105,668,896 105,698,410 RGD:2290270
growth plate cartilage axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Stc1 stanniocalcin 1 JBrowse link 14 69,029,289 69,041,401 RGD:2290270
heart looping term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ahi1 Abelson helper integration site 1 JBrowse link 10 20,952,490 21,080,429 RGD:2290270
G Aldh1a2 aldehyde dehydrogenase family 1, subfamily A2 JBrowse link 9 71,215,789 71,296,243 RGD:2290270
G Arl13b ADP-ribosylation factor-like 13B JBrowse link 16 62,793,308 62,847,053 RGD:2290270
G C2cd3 C2 calcium-dependent domain containing 3 JBrowse link 7 100,372,233 100,470,159 RGD:2290270
G Ccdc103 coiled-coil domain containing 103 JBrowse link 11 102,881,244 102,885,215 RGD:2290270
G Ccdc39 coiled-coil domain containing 39 JBrowse link 3 33,810,757 33,844,325 RGD:2290270
G Ccdc40 coiled-coil domain containing 40 JBrowse link 11 119,228,572 119,265,248 RGD:2290270
G Cfc1 cripto, FRL-1, cryptic family 1 JBrowse link 1 34,535,648 34,544,311 RGD:2290270
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 JBrowse link 10 17,723,228 17,725,674 RGD:2290270
G Cluap1 clusterin associated protein 1 JBrowse link 16 3,907,627 3,941,147 RGD:2290270
G Dll1 delta like canonical Notch ligand 1 JBrowse link 17 15,367,354 15,376,048 RGD:2290270
G Dnaaf1 dynein, axonemal assembly factor 1 JBrowse link 8 119,575,235 119,598,454 RGD:2290270
G Eng endoglin JBrowse link 2 32,646,595 32,682,669 RGD:2290270
G Fgf8 fibroblast growth factor 8 JBrowse link 19 45,736,798 45,742,938 RGD:2290270
G Folr1 folate receptor 1 (adult) JBrowse link 7 101,858,331 101,870,788 RGD:2290270
G Foxh1 forkhead box H1 JBrowse link 15 76,667,829 76,671,545 RGD:2290270
G Gata4 GATA binding protein 4 JBrowse link 14 63,198,914 63,271,715 RGD:2290270
G Gja1 gap junction protein, alpha 1 JBrowse link 10 56,377,300 56,390,419 RGD:2290270
G Hand1 heart and neural crest derivatives expressed 1 JBrowse link 11 57,828,713 57,832,147 RGD:2290270
G Hand2 heart and neural crest derivatives expressed 2 JBrowse link 8 57,320,983 57,324,517 RGD:2290270
G Hif1a hypoxia inducible factor 1, alpha subunit JBrowse link 12 73,901,324 73,947,554 RGD:2290270
G Ift172 intraflagellar transport 172 JBrowse link 5 31,253,279 31,291,114 RGD:2290270
G Ift52 intraflagellar transport 52 JBrowse link 2 163,017,293 163,046,155 RGD:2290270
G Ift57 intraflagellar transport 57 JBrowse link 16 49,699,294 49,765,126 RGD:2290270
G Ihh Indian hedgehog JBrowse link 1 74,945,315 74,951,672 RGD:2290270
G Kdm2a lysine (K)-specific demethylase 2A JBrowse link 19 4,316,144 4,398,596 RGD:2290270
G Kif3a kinesin family member 3A JBrowse link 11 53,567,192 53,604,248 RGD:2290270
G Lbx1 ladybird homeobox 1 JBrowse link 19 45,232,684 45,237,430 RGD:2290270
G Lrp6 low density lipoprotein receptor-related protein 6 JBrowse link 6 134,446,476 134,567,018 RGD:2290270
G Mef2c myocyte enhancer factor 2C JBrowse link 13 83,504,034 83,667,079 RGD:2290270
G Mesp1 mesoderm posterior 1 JBrowse link 7 79,792,241 79,793,590 RGD:2290270
G Mib1 mindbomb E3 ubiquitin protein ligase 1 JBrowse link 18 10,725,553 10,818,578 RGD:2290270
G Nkx2-5 NK2 homeobox 5 JBrowse link 17 26,838,664 26,844,995 RGD:2290270
G Nodal nodal JBrowse link 10 61,417,972 61,425,337 RGD:2290270
G Notch1 notch 1 JBrowse link 2 26,457,902 26,503,822 RGD:2290270
G Notch2 notch 2 JBrowse link 3 98,013,538 98,150,367 RGD:2290270
G Noto notochord homeobox JBrowse link 6 85,423,886 85,428,877 RGD:2290270
G Nphp3 nephronophthisis 3 (adolescent) JBrowse link 9 104,002,544 104,043,811 RGD:2290270
G Ovol2 ovo like zinc finger 2 JBrowse link 2 144,305,175 144,332,080 RGD:2290270
G Pkd2 polycystic kidney disease 2 JBrowse link 5 104,453,995 104,505,819 RGD:2290270
G Psen1 presenilin 1 JBrowse link 12 83,688,145 83,738,446 RGD:2290270
G Rbpj recombination signal binding protein for immunoglobulin kappa J region JBrowse link 5 53,466,115 53,657,445 RGD:2290270
G Shh sonic hedgehog JBrowse link 5 28,456,840 28,467,101 RGD:2290270
G Smad3 SMAD family member 3 JBrowse link 9 63,646,766 63,757,994 RGD:2290270
G Smo smoothened, frizzled class receptor JBrowse link 6 29,735,497 29,761,366 RGD:2290270
G Sox17 SRY (sex determining region Y)-box 17 JBrowse link 1 4,490,928 4,497,386 RGD:2290270
G Srf serum response factor JBrowse link 17 46,546,838 46,557,214 RGD:2290270
G Stil Scl/Tal1 interrupting locus JBrowse link 4 115,000,108 115,043,203 RGD:2290270
G Sufu SUFU negative regulator of hedgehog signaling JBrowse link 19 46,396,896 46,488,804 RGD:2290270
G Tbx20 T-box 20 JBrowse link 9 24,720,812 24,774,303 RGD:2290270
G Tbx3 T-box 3 JBrowse link 5 119,670,319 119,684,724 RGD:2290270
G Tgfbr2 transforming growth factor, beta receptor II JBrowse link 9 116,087,695 116,175,363 RGD:2290270
G Tmed2 transmembrane p24 trafficking protein 2 JBrowse link 5 124,540,791 124,550,503 RGD:2290270
G Vangl2 VANGL planar cell polarity 2 JBrowse link 1 172,000,960 172,027,314 RGD:2290270
G Wnt3a wingless-type MMTV integration site family, member 3A JBrowse link 11 59,248,036 59,290,751 RGD:2290270
G Wnt5a wingless-type MMTV integration site family, member 5A JBrowse link 14 28,505,473 28,527,448 RGD:2290270
G Zic3 zinc finger protein of the cerebellum 3 JBrowse link X 58,021,464 58,041,735 RGD:2290270
left/right axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arl13b ADP-ribosylation factor-like 13B JBrowse link 16 62,793,308 62,847,053 RGD:2290270
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 JBrowse link 10 17,723,228 17,725,674 RGD:2290270
G Dll1 delta like canonical Notch ligand 1 JBrowse link 17 15,367,354 15,376,048 RGD:2290270
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 JBrowse link 1 119,545,032 119,649,138 RGD:2290270
G Hspb11 heat shock protein family B (small), member 11 JBrowse link 4 107,253,598 107,284,497 RGD:2290270
G Ift172 intraflagellar transport 172 JBrowse link 5 31,253,279 31,291,114 RGD:2290270
G Mns1 meiosis-specific nuclear structural protein 1 JBrowse link 9 72,438,517 72,458,581 RGD:2290270
G Notch1 notch 1 JBrowse link 2 26,457,902 26,503,822 RGD:2290270
G Notch2 notch 2 JBrowse link 3 98,013,538 98,150,367 RGD:2290270
G Pitx2 paired-like homeodomain transcription factor 2 JBrowse link 3 129,199,878 129,219,594 RGD:2290270
G Pkd1l1 polycystic kidney disease 1 like 1 JBrowse link 11 8,825,696 8,974,709 RGD:2290270
G Smo smoothened, frizzled class receptor JBrowse link 6 29,735,497 29,761,366 RGD:2290270
left/right pattern formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cluap1 clusterin associated protein 1 JBrowse link 16 3,907,627 3,941,147 RGD:2290270
G Dmrt2 doublesex and mab-3 related transcription factor 2 JBrowse link 19 25,672,389 25,679,013 RGD:2290270
G Dnaaf1 dynein, axonemal assembly factor 1 JBrowse link 8 119,575,235 119,598,454 RGD:2290270
G Dpcd deleted in primary ciliary dyskinesia JBrowse link 19 45,560,590 45,578,287 RGD:2290270
G Foxj1 forkhead box J1 JBrowse link 11 116,330,704 116,335,516 RGD:2290270
G Ift57 intraflagellar transport 57 JBrowse link 16 49,699,294 49,765,126 RGD:2290270
G Megf8 multiple EGF-like-domains 8 JBrowse link 7 25,316,736 25,365,917 RGD:2290270
G Nme7 NME/NM23 family member 7 JBrowse link 1 164,307,662 164,437,300 RGD:2290270
G Pkd1l1 polycystic kidney disease 1 like 1 JBrowse link 11 8,825,696 8,974,709 RGD:2290270
G Snai1 snail family zinc finger 1 JBrowse link 2 167,538,195 167,542,814 RGD:2290270
lung induction term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ctnnb1 catenin (cadherin associated protein), beta 1 JBrowse link 9 120,933,400 120,960,507 RGD:2290270
G Wnt2 wingless-type MMTV integration site family, member 2 JBrowse link 6 17,985,474 18,032,751 RGD:2290270
G Wnt2b wingless-type MMTV integration site family, member 2B JBrowse link 3 104,944,805 104,961,709 RGD:2290270
lung proximal/distal axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fgf10 fibroblast growth factor 10 JBrowse link 13 118,714,699 118,792,573 RGD:2290270
mammary gland specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fgf10 fibroblast growth factor 10 JBrowse link 13 118,714,699 118,792,573 RGD:2290270
G Gli3 GLI-Kruppel family member GLI3 JBrowse link 13 15,463,723 15,730,026 RGD:2290270
G Pax3 paired box 3 JBrowse link 1 78,101,267 78,197,136 RGD:2290270
metanephric capsule specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Foxd1 forkhead box D1 JBrowse link 13 98,354,245 98,356,705 RGD:2290270
midbrain-hindbrain boundary development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G En1 engrailed 1 JBrowse link 1 120,602,487 120,607,991 RGD:2290270
G Fgf8 fibroblast growth factor 8 JBrowse link 19 45,736,798 45,742,938 RGD:2290270
G Gbx2 gastrulation brain homeobox 2 JBrowse link 1 89,927,962 89,931,176 RGD:2290270
G Lrp6 low density lipoprotein receptor-related protein 6 JBrowse link 6 134,446,476 134,567,018 RGD:2290270
G Wnt1 wingless-type MMTV integration site family, member 1 JBrowse link 15 98,789,857 98,793,830 RGD:2290270
midbrain-hindbrain boundary initiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ssbp3 single-stranded DNA binding protein 3 JBrowse link 4 106,911,470 107,049,694 RGD:2290270
midbrain-hindbrain boundary maturation during brain development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Wnt1 wingless-type MMTV integration site family, member 1 JBrowse link 15 98,789,857 98,793,830 RGD:2290270
midbrain-hindbrain boundary morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gbx2 gastrulation brain homeobox 2 JBrowse link 1 89,927,962 89,931,176 RGD:2290270
G Hes1 hes family bHLH transcription factor 1 JBrowse link 16 30,065,357 30,067,796 RGD:2290270
G Hes3 hes family bHLH transcription factor 3 JBrowse link 4 152,285,965 152,291,910 RGD:2290270
G Kdm2b lysine (K)-specific demethylase 2B JBrowse link 5 122,870,664 122,989,162 RGD:2290270
negative regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tbx18 T-box18 JBrowse link 9 87,702,800 87,731,260 RGD:2290270
negative regulation of determination of dorsal identity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aida axin interactor, dorsalization associated JBrowse link 1 183,297,060 183,324,501 RGD:2290270
G Ddit3 DNA-damage inducible transcript 3 JBrowse link 10 127,290,793 127,296,291 RGD:2290270
G Sostdc1 sclerostin domain containing 1 JBrowse link 12 36,314,169 36,318,452 RGD:2290270
negative regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fuz fuzzy planar cell polarity protein JBrowse link 7 44,896,079 44,900,624 RGD:2290270
G Ofd1 OFD1, centriole and centriolar satellite protein JBrowse link X 166,390,033 166,440,704 RGD:2290270
negative regulation of heart induction by canonical Wnt signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Wnt3a wingless-type MMTV integration site family, member 3A JBrowse link 11 59,248,036 59,290,751 RGD:2290270
negative regulation of heart looping term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tbx2 T-box 2 JBrowse link 11 85,832,615 85,841,948 RGD:2290270
negative regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cer1 cerberus 1, DAN family BMP antagonist JBrowse link 4 82,881,751 82,885,151 RGD:2290270
G Dand5 DAN domain family member 5, BMP antagonist JBrowse link 8 84,815,405 84,832,265 RGD:2290270
negative regulation of Notch signaling pathway involved in somitogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase JBrowse link 5 140,607,341 140,615,545 RGD:2290270
G Nrarp Notch-regulated ankyrin repeat protein JBrowse link 2 25,180,758 25,183,339 RGD:2290270
negative regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gpr161 G protein-coupled receptor 161 JBrowse link 1 165,281,158 165,326,747 RGD:2290270
G Prkaca protein kinase, cAMP dependent, catalytic, alpha JBrowse link 8 83,972,978 83,996,444 RGD:2290270
G Prkacb protein kinase, cAMP dependent, catalytic, beta JBrowse link 3 146,729,579 146,812,946 RGD:2290270
G Sufu SUFU negative regulator of hedgehog signaling JBrowse link 19 46,396,896 46,488,804 RGD:2290270
G Traf3ip1 TRAF3 interacting protein 1 JBrowse link 1 91,494,590 91,529,307 RGD:2290270
G Tulp3 tubby-like protein 3 JBrowse link 6 128,321,161 128,355,873 RGD:2290270
negative regulation of smoothened signaling pathway involved in ventral spinal cord patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ift122 intraflagellar transport 122 JBrowse link 6 115,853,455 115,926,699 RGD:2290270
G Rfx4 regulatory factor X, 4 (influences HLA class II expression) JBrowse link 10 84,756,048 84,906,538 RGD:2290270
G Tulp3 tubby-like protein 3 JBrowse link 6 128,321,161 128,355,873 RGD:2290270
negative regulation of Wnt signaling pathway involved in dorsal/ventral axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Axin2 axin 2 JBrowse link 11 108,917,828 108,950,783 RGD:2290270
G Sfrp1 secreted frizzled-related protein 1 JBrowse link 8 23,411,382 23,449,632 RGD:2290270
neural plate anterior/posterior regionalization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Celsr2 cadherin, EGF LAG seven-pass G-type receptor 2 JBrowse link 3 108,390,848 108,415,920 RGD:2290270
neural plate axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G C2cd3 C2 calcium-dependent domain containing 3 JBrowse link 7 100,372,233 100,470,159 RGD:2290270
G Ptch1 patched 1 JBrowse link 13 63,508,328 63,573,616 RGD:2290270
neural plate mediolateral regionalization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmpr1a bone morphogenetic protein receptor, type 1A JBrowse link 14 34,411,068 34,503,461 RGD:2290270
neural plate pattern specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmpr1a bone morphogenetic protein receptor, type 1A JBrowse link 14 34,411,068 34,503,461 RGD:2290270
neural tube patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arl13b ADP-ribosylation factor-like 13B JBrowse link 16 62,793,308 62,847,053 RGD:2290270
G Ift140 intraflagellar transport 140 JBrowse link 17 25,016,082 25,099,499 RGD:2290270
G Ptch1 patched 1 JBrowse link 13 63,508,328 63,573,616 RGD:2290270
G Rpgrip1l Rpgrip1-like JBrowse link 8 91,217,030 91,313,354 RGD:2290270
G Tmem107 transmembrane protein 107 JBrowse link 11 69,070,809 69,073,293 RGD:2290270
G Traf3ip1 TRAF3 interacting protein 1 JBrowse link 1 91,494,590 91,529,307 RGD:2290270
nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 JBrowse link 10 17,723,228 17,725,674 RGD:2290270
G Dand5 DAN domain family member 5, BMP antagonist JBrowse link 8 84,815,405 84,832,265 RGD:2290270
G Megf8 multiple EGF-like-domains 8 JBrowse link 7 25,316,736 25,365,917 RGD:2290270
G Nodal nodal JBrowse link 10 61,417,972 61,425,337 RGD:2290270
organ induction term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp4 bone morphogenetic protein 4 JBrowse link 14 46,383,525 46,390,669 RGD:2290270
G Fgf1 fibroblast growth factor 1 JBrowse link 18 38,838,672 38,929,480 RGD:2290270
G Fgf10 fibroblast growth factor 10 JBrowse link 13 118,714,699 118,792,573 RGD:2290270
G Fgf2 fibroblast growth factor 2 JBrowse link 3 37,348,477 37,404,893 RGD:2290270
G Fgf3 fibroblast growth factor 3 JBrowse link 7 144,837,957 144,844,447 RGD:2290270
G Fgf8 fibroblast growth factor 8 JBrowse link 19 45,736,798 45,742,938 RGD:2290270
G Fgfr1 fibroblast growth factor receptor 1 JBrowse link 8 25,513,623 25,575,718 RGD:2290270
G Fgfr4 fibroblast growth factor receptor 4 JBrowse link 13 55,152,818 55,168,759 RGD:2290270
G Frs2 fibroblast growth factor receptor substrate 2 JBrowse link 10 117,070,127 117,148,474 RGD:2290270
G Gdnf glial cell line derived neurotrophic factor JBrowse link 15 7,810,048 7,837,580 RGD:2290270
G Hoxa11 homeobox A11 JBrowse link 6 52,242,105 52,245,810 RGD:2290270
G Hoxc11 homeobox C11 JBrowse link 15 102,954,526 102,956,701 RGD:2290270
G Hoxd11 homeobox D11 JBrowse link 2 74,679,558 74,687,016 RGD:2290270
G Six1 sine oculis-related homeobox 1 JBrowse link 12 73,041,827 73,046,712 RGD:2290270
G Spry1 sprouty RTK signaling antagonist 1 JBrowse link 3 37,639,947 37,644,599 RGD:2290270
P granule organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pld6 phospholipase D family, member 6 JBrowse link 11 59,783,893 59,787,657 RGD:2290270
G Tdrd5 tudor domain containing 5 JBrowse link 1 156,255,296 156,305,287 RGD:2290270
pattern specification involved in metanephros development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Foxd1 forkhead box D1 JBrowse link 13 98,354,245 98,356,705 RGD:2290270
G Osr1 odd-skipped related transcription factor 1 JBrowse link 12 9,574,442 9,581,500 RGD:2290270
polarity specification of anterior/posterior axis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Shh sonic hedgehog JBrowse link 5 28,456,840 28,467,101 RGD:2290270
G Wnt8a wingless-type MMTV integration site family, member 8A JBrowse link 18 34,542,328 34,548,061 RGD:2290270
polarity specification of proximal/distal axis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nodal nodal JBrowse link 10 61,417,972 61,425,337 RGD:2290270
G Wnt8a wingless-type MMTV integration site family, member 8A JBrowse link 18 34,542,328 34,548,061 RGD:2290270
positive regulation of determination of dorsal identity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acvr1 activin A receptor, type 1 JBrowse link 2 58,446,438 58,566,828 RGD:2290270
G Ctnnb1 catenin (cadherin associated protein), beta 1 JBrowse link 9 120,933,400 120,960,507 RGD:2290270
G Mapk8 mitogen-activated protein kinase 8 JBrowse link 14 33,377,898 33,447,212 RGD:2290270
positive regulation of heart induction by negative regulation of canonical Wnt signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 JBrowse link 19 30,545,876 30,549,496 RGD:2290270
G Mesp1 mesoderm posterior 1 JBrowse link 7 79,792,241 79,793,590 RGD:2290270
positive regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Smad2 SMAD family member 2 JBrowse link 18 76,241,265 76,311,748 RGD:2290270
G Zic2 zinc finger protein of the cerebellum 2 JBrowse link 14 122,475,384 122,480,328 RGD:2290270
positive regulation of Notch signaling pathway involved in heart induction term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gata5 GATA binding protein 5 JBrowse link 2 180,325,088 180,335,508 RGD:2290270
G Mesp1 mesoderm posterior 1 JBrowse link 7 79,792,241 79,793,590 RGD:2290270
G Rbpj recombination signal binding protein for immunoglobulin kappa J region JBrowse link 5 53,466,115 53,657,445 RGD:2290270
G Robo1 roundabout guidance receptor 1 JBrowse link 16 72,027,551 73,047,491 RGD:2290270
G Robo2 roundabout guidance receptor 2 JBrowse link 16 73,891,976 75,447,302 RGD:2290270
positive regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gorab golgin, RAB6-interacting JBrowse link 1 163,384,903 163,403,669 RGD:2290270
primary heart field specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mef2c myocyte enhancer factor 2C JBrowse link 13 83,504,034 83,667,079 RGD:2290270
primitive streak formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ets2 E26 avian leukemia oncogene 2, 3' domain JBrowse link 16 95,702,407 95,721,049 RGD:2290270
G Foxa2 forkhead box A2 JBrowse link 2 148,042,877 148,046,969 RGD:2290270
G Gdf3 growth differentiation factor 3 JBrowse link 6 122,605,403 122,610,071 RGD:2290270
G Hhex hematopoietically expressed homeobox JBrowse link 19 37,434,841 37,440,731 RGD:2290270
G Lhx1 LIM homeobox protein 1 JBrowse link 11 84,519,379 84,525,534 RGD:2290270
G Lrp6 low density lipoprotein receptor-related protein 6 JBrowse link 6 134,446,476 134,567,018 RGD:2290270
G Nodal nodal JBrowse link 10 61,417,972 61,425,337 RGD:2290270
G Otx2 orthodenticle homeobox 2 JBrowse link 14 48,657,452 48,667,644 RGD:2290270
G Srf serum response factor JBrowse link 17 46,546,838 46,557,214 RGD:2290270
G Wnt5a wingless-type MMTV integration site family, member 5A JBrowse link 14 28,505,473 28,527,448 RGD:2290270
pronephric field specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pax2 paired box 2 JBrowse link 19 44,745,693 44,837,871 RGD:2290270
G Pax8 paired box 8 JBrowse link 2 24,420,551 24,480,095 RGD:2290270
proximal/distal axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Six3 sine oculis-related homeobox 3 JBrowse link 17 85,613,608 85,626,191 RGD:2290270
proximal/distal pattern formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aldh1a2 aldehyde dehydrogenase family 1, subfamily A2 JBrowse link 9 71,215,789 71,296,243 RGD:2290270
G Apc APC, WNT signaling pathway regulator JBrowse link 18 34,220,617 34,322,190 RGD:2290270
G Chsy1 chondroitin sulfate synthase 1 JBrowse link 7 66,109,515 66,173,798 RGD:2290270
G Ctnnb1 catenin (cadherin associated protein), beta 1 JBrowse link 9 120,933,400 120,960,507 RGD:2290270
G Cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 JBrowse link 6 84,571,414 84,593,908 RGD:2290270
G Dll1 delta like canonical Notch ligand 1 JBrowse link 17 15,367,354 15,376,048 RGD:2290270
G Dlx1 distal-less homeobox 1 JBrowse link 2 71,528,113 71,533,981 RGD:2290270
G Dlx2 distal-less homeobox 2 JBrowse link 2 71,543,408 71,546,754 RGD:2290270
G En1 engrailed 1 JBrowse link 1 120,602,487 120,607,991 RGD:2290270
G Gli1 GLI-Kruppel family member GLI1 JBrowse link 10 127,329,882 127,341,579 RGD:2290270
G Gli2 GLI-Kruppel family member GLI2 JBrowse link 1 118,834,061 119,053,619 RGD:2290270
G Gli3 GLI-Kruppel family member GLI3 JBrowse link 13 15,463,723 15,730,026 RGD:2290270
G Grem1 gremlin 1, DAN family BMP antagonist JBrowse link 2 113,748,674 113,758,785 RGD:2290270
G Hoxa10 homeobox A10 JBrowse link 6 52,231,197 52,240,854 RGD:2290270
G Hoxa11 homeobox A11 JBrowse link 6 52,242,105 52,245,810 RGD:2290270
G Hoxa9 homeobox A9 JBrowse link 6 52,223,097 52,227,370 RGD:2290270
G Hoxc10 homeobox C10 JBrowse link 15 102,966,796 102,971,898 RGD:2290270
G Hoxc11 homeobox C11 JBrowse link 15 102,954,526 102,956,701 RGD:2290270
G Hoxd10 homeobox D10 JBrowse link 2 74,684,273 74,695,106 RGD:2290270
G Hoxd11 homeobox D11 JBrowse link 2 74,679,558 74,687,016 RGD:2290270
G Hoxd9 homeobox D9 JBrowse link 2 74,697,763 74,700,208 RGD:2290270
G Lrp4 low density lipoprotein receptor-related protein 4 JBrowse link 2 91,457,471 91,513,901 RGD:2290270
G Pbx1 pre B cell leukemia homeobox 1 JBrowse link 1 168,119,364 168,432,264 RGD:2290270
G Pbx2 pre B cell leukemia homeobox 2 JBrowse link 17 34,592,471 34,597,341 RGD:2290270
G Sp8 trans-acting transcription factor 8 JBrowse link 12 118,845,353 118,852,578 RGD:2290270
G Trp63 transformation related protein 63 JBrowse link 16 25,683,763 25,892,088 RGD:2290270
proximal/distal pattern formation involved in metanephric nephron development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Irx1 Iroquois homeobox 1 JBrowse link 13 71,958,232 71,963,723 RGD:2290270
G Irx2 Iroquois homeobox 2 JBrowse link 13 72,628,797 72,634,196 RGD:2290270
proximal/distal pattern formation involved in nephron development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Irx3 Iroquois related homeobox 3 JBrowse link 8 91,798,511 91,801,654 RGD:2290270
radial pattern formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nr2f2 nuclear receptor subfamily 2, group F, member 2 JBrowse link 7 70,351,946 70,366,746 RGD:2290270
regionalization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pax6 paired box 6 JBrowse link 2 105,668,896 105,698,410 RGD:2290270
G Wnt8a wingless-type MMTV integration site family, member 8A JBrowse link 18 34,542,328 34,548,061 RGD:2290270
regulation of adaxial/abaxial pattern formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmi1 Bmi1 polycomb ring finger oncogene JBrowse link 2 18,677,018 18,686,629 RGD:2290270
G Eed embryonic ectoderm development JBrowse link 7 89,954,654 89,981,419 RGD:2290270
regulation of cell motility involved in somitogenic axis elongation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ppp2r3a protein phosphatase 2, regulatory subunit B'', alpha JBrowse link 9 101,104,989 101,251,832 RGD:2290270
regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nog noggin JBrowse link 11 89,300,638 89,302,559 RGD:2290270
regulation of heart induction by regulation of canonical Wnt signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pou5f1 POU domain, class 5, transcription factor 1 JBrowse link 17 35,506,032 35,510,777 RGD:2290270
regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mks1 Meckel syndrome, type 1 JBrowse link 11 87,852,929 87,863,679 RGD:2290270
regulation of somitogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdx1 caudal type homeobox 1 JBrowse link 18 61,018,862 61,036,199 RGD:2290270
G Cdx2 caudal type homeobox 2 JBrowse link 5 147,300,900 147,307,249 RGD:2290270
G Dll1 delta like canonical Notch ligand 1 JBrowse link 17 15,367,354 15,376,048 RGD:2290270
G Dmrt2 doublesex and mab-3 related transcription factor 2 JBrowse link 19 25,672,389 25,679,013 RGD:2290270
G Hes7 hes family bHLH transcription factor 7 JBrowse link 11 69,118,710 69,124,054 RGD:2290270
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase JBrowse link 5 140,607,341 140,615,545 RGD:2290270
G Notch1 notch 1 JBrowse link 2 26,457,902 26,503,822 RGD:2290270
G Pax3 paired box 3 JBrowse link 1 78,101,267 78,197,136 RGD:2290270
regulation of transcription from RNA polymerase II promoter involved in ventral spinal cord interneuron specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Evx1 even-skipped homeobox 1 JBrowse link 6 52,313,498 52,318,389 RGD:2290270
G Nkx6-1 NK6 homeobox 1 JBrowse link 5 101,659,184 101,664,711 RGD:2290270
G Nkx6-2 NK6 homeobox 2 JBrowse link 7 139,579,376 139,582,797 RGD:2290270
G Pax6 paired box 6 JBrowse link 2 105,668,896 105,698,410 RGD:2290270
regulation of transcription involved in anterior/posterior axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ddit3 DNA-damage inducible transcript 3 JBrowse link 10 127,290,793 127,296,291 RGD:2290270
retinoic acid receptor signaling pathway involved in somitogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aldh1a2 aldehyde dehydrogenase family 1, subfamily A2 JBrowse link 9 71,215,789 71,296,243 RGD:2290270
rostrocaudal neural tube patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp6ap2 ATPase, H+ transporting, lysosomal accessory protein 2 JBrowse link X 12,587,759 12,617,051 RGD:2290270
G Bmi1 Bmi1 polycomb ring finger oncogene JBrowse link 2 18,677,018 18,686,629 RGD:2290270
G Sox17 SRY (sex determining region Y)-box 17 JBrowse link 1 4,490,928 4,497,386 RGD:2290270
secondary heart field specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Axin2 axin 2 JBrowse link 11 108,917,828 108,950,783 RGD:2290270
G Bmp4 bone morphogenetic protein 4 JBrowse link 14 46,383,525 46,390,669 RGD:2290270
G Foxh1 forkhead box H1 JBrowse link 15 76,667,829 76,671,545 RGD:2290270
G Isl1 ISL1 transcription factor, LIM/homeodomain JBrowse link 13 116,298,257 116,309,721 RGD:2290270
G Lrp2 low density lipoprotein receptor-related protein 2 JBrowse link 2 69,424,335 69,586,067 RGD:2290270
G Mef2c myocyte enhancer factor 2C JBrowse link 13 83,504,034 83,667,079 RGD:2290270
G Mesp1 mesoderm posterior 1 JBrowse link 7 79,792,241 79,793,590 RGD:2290270
G Rbpj recombination signal binding protein for immunoglobulin kappa J region JBrowse link 5 53,466,115 53,657,445 RGD:2290270
G Smarcd3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 JBrowse link 5 24,592,622 24,624,456 RGD:2290270
segment specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dvl2 dishevelled segment polarity protein 2 JBrowse link 11 70,000,626 70,010,109 RGD:2290270
G Hoxa2 homeobox A2 JBrowse link 6 52,162,417 52,164,831 RGD:2290270
G Mafb v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian) JBrowse link 2 160,363,677 160,367,065 RGD:2290270
G Mllt3 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3 JBrowse link 4 87,769,925 88,033,407 RGD:2290270
G Msgn1 mesogenin 1 JBrowse link 12 11,208,382 11,208,948 RGD:2290270
G Mtf2 metal response element binding transcription factor 2 JBrowse link 5 108,065,668 108,109,219 RGD:2290270
segmentation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acd adrenocortical dysplasia JBrowse link 8 105,698,157 105,701,290 RGD:2290270
G Dvl2 dishevelled segment polarity protein 2 JBrowse link 11 70,000,626 70,010,109 RGD:2290270
G Psen1 presenilin 1 JBrowse link 12 83,688,145 83,738,446 RGD:2290270
sensory organ boundary specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ntf5 neurotrophin 5 JBrowse link 7 45,413,695 45,417,179 RGD:2290270
smoothened signaling pathway involved in dorsal/ventral neural tube patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gli2 GLI-Kruppel family member GLI2 JBrowse link 1 118,834,061 119,053,619 RGD:2290270
G Gli3 GLI-Kruppel family member GLI3 JBrowse link 13 15,463,723 15,730,026 RGD:2290270
G Ift122 intraflagellar transport 122 JBrowse link 6 115,853,455 115,926,699 RGD:2290270
G Ptch1 patched 1 JBrowse link 13 63,508,328 63,573,616 RGD:2290270
G Tbc1d32 TBC1 domain family, member 32 JBrowse link 10 56,014,293 56,229,457 RGD:2290270
G Tulp3 tubby-like protein 3 JBrowse link 6 128,321,161 128,355,873 RGD:2290270
G Wdr19 WD repeat domain 19 JBrowse link 5 65,199,658 65,260,415 RGD:2290270
smoothened signaling pathway involved in spinal cord motor neuron cell fate specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gli2 GLI-Kruppel family member GLI2 JBrowse link 1 118,834,061 119,053,619 RGD:2290270
G Gli3 GLI-Kruppel family member GLI3 JBrowse link 13 15,463,723 15,730,026 RGD:2290270
G Sufu SUFU negative regulator of hedgehog signaling JBrowse link 19 46,396,896 46,488,804 RGD:2290270
smoothened signaling pathway involved in ventral spinal cord interneuron specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gli2 GLI-Kruppel family member GLI2 JBrowse link 1 118,834,061 119,053,619 RGD:2290270
G Gli3 GLI-Kruppel family member GLI3 JBrowse link 13 15,463,723 15,730,026 RGD:2290270
G Sufu SUFU negative regulator of hedgehog signaling JBrowse link 19 46,396,896 46,488,804 RGD:2290270
smoothened signaling pathway involved in ventral spinal cord patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Smo smoothened, frizzled class receptor JBrowse link 6 29,735,497 29,761,366 RGD:2290270
somite rostral/caudal axis specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 JBrowse link 1 119,545,032 119,649,138 RGD:2290270
G Foxa2 forkhead box A2 JBrowse link 2 148,042,877 148,046,969 RGD:2290270
G Gdf3 growth differentiation factor 3 JBrowse link 6 122,605,403 122,610,071 RGD:2290270
G Kdm6a lysine (K)-specific demethylase 6A JBrowse link X 18,162,364 18,279,936 RGD:2290270
G Lhx1 LIM homeobox protein 1 JBrowse link 11 84,519,379 84,525,534 RGD:2290270
G Mesp2 mesoderm posterior 2 JBrowse link 7 79,810,727 79,813,431 RGD:2290270
G Nrarp Notch-regulated ankyrin repeat protein JBrowse link 2 25,180,758 25,183,339 RGD:2290270
G Otx2 orthodenticle homeobox 2 JBrowse link 14 48,657,452 48,667,644 RGD:2290270
G Ripply1 ripply transcriptional repressor 1 JBrowse link X 139,779,681 139,782,353 RGD:2290270
G Ripply2 ripply transcriptional repressor 2 JBrowse link 9 87,015,376 87,020,441 RGD:2290270
G Smad4 SMAD family member 4 JBrowse link 18 73,634,858 73,703,741 RGD:2290270
G Tbx6 T-box 6 JBrowse link 7 126,781,483 126,785,548 RGD:2290270
G Tmed2 transmembrane p24 trafficking protein 2 JBrowse link 5 124,540,791 124,550,503 RGD:2290270
somite specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cobl cordon-bleu WH2 repeat JBrowse link 11 12,236,676 12,464,960 RGD:2290270
G Dll1 delta like canonical Notch ligand 1 JBrowse link 17 15,367,354 15,376,048 RGD:2290270
G Meox1 mesenchyme homeobox 1 JBrowse link 11 101,877,510 101,894,354 RGD:2290270
G Meox2 mesenchyme homeobox 2 JBrowse link 12 37,108,546 37,179,528 RGD:2290270
somitogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abi1 abl-interactor 1 JBrowse link 2 22,939,989 23,040,241 RGD:2290270
G Atm ataxia telangiectasia mutated JBrowse link 9 53,437,122 53,536,816 RGD:2290270
G Axin2 axin 2 JBrowse link 11 108,917,828 108,950,783 RGD:2290270
G Bhlhe40 basic helix-loop-helix family, member e40 JBrowse link 6 108,660,629 108,666,925 RGD:2290270
G Bhlhe41 basic helix-loop-helix family, member e41 JBrowse link 6 145,858,243 145,865,420 RGD:2290270
G Bmpr1a bone morphogenetic protein receptor, type 1A JBrowse link 14 34,411,068 34,503,461 RGD:2290270
G Crb2 crumbs family member 2 JBrowse link 2 37,776,225 37,799,103 RGD:2290270
G Dll1 delta like canonical Notch ligand 1 JBrowse link 17 15,367,354 15,376,048 RGD:2290270
G Dll3 delta like canonical Notch ligand 3 JBrowse link 7 28,293,555 28,301,785 RGD:2290270
G Ep300 E1A binding protein p300 JBrowse link 15 81,586,214 81,652,077 RGD:2290270
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 JBrowse link 1 119,545,032 119,649,138 RGD:2290270
G Foxb1 forkhead box B1 JBrowse link 9 69,757,710 69,760,940 RGD:2290270
G Foxc1 forkhead box C1 JBrowse link 13 31,806,646 31,810,635 RGD:2290270
G Foxc2 forkhead box C2 JBrowse link 8 121,116,171 121,118,895 RGD:2290270
G Foxf1 forkhead box F1 JBrowse link 8 121,084,386 121,088,154 RGD:2290270
G Hes1 hes family bHLH transcription factor 1 JBrowse link 16 30,065,357 30,067,796 RGD:2290270
G Hes2 hes family bHLH transcription factor 2 JBrowse link 4 152,158,867 152,162,469 RGD:2290270
G Hes3 hes family bHLH transcription factor 3 JBrowse link 4 152,285,965 152,291,910 RGD:2290270
G Hes5 hes family bHLH transcription factor 5 JBrowse link 4 154,960,289 154,962,372 RGD:2290270
G Hes6 hairy and enhancer of split 6 JBrowse link 1 91,411,482 91,413,877 RGD:2290270
G Hes7 hes family bHLH transcription factor 7 JBrowse link 11 69,118,710 69,124,054 RGD:2290270
G Ifitm1 interferon induced transmembrane protein 1 JBrowse link 7 140,967,429 140,969,828 RGD:2290270
G Kat2a K(lysine) acetyltransferase 2A JBrowse link 11 100,704,746 100,712,478 RGD:2290270
G Lef1 lymphoid enhancer binding factor 1 JBrowse link 3 131,110,263 131,224,357 RGD:2290270
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase JBrowse link 5 140,607,341 140,615,545 RGD:2290270
G Lrp6 low density lipoprotein receptor-related protein 6 JBrowse link 6 134,446,476 134,567,018 RGD:2290270
G Med12 mediator complex subunit 12 JBrowse link X 101,274,091 101,298,934 RGD:2290270
G Mesp1 mesoderm posterior 1 JBrowse link 7 79,792,241 79,793,590 RGD:2290270
G Mesp2 mesoderm posterior 2 JBrowse link 7 79,810,727 79,813,431 RGD:2290270
G Mib1 mindbomb E3 ubiquitin protein ligase 1 JBrowse link 18 10,725,553 10,818,578 RGD:2290270
G Msgn1 mesogenin 1 JBrowse link 12 11,208,382 11,208,948 RGD:2290270
G Myf5 myogenic factor 5 JBrowse link 10 107,482,908 107,486,927 RGD:2290270
G Myf6 myogenic factor 6 JBrowse link 10 107,492,860 107,494,729 RGD:2290270
G Nckap1 NCK-associated protein 1 JBrowse link 2 80,500,512 80,581,299 RGD:2290270
G Nkx3-1 NK3 homeobox 1 JBrowse link 14 69,190,692 69,194,658 RGD:2290270
G Nle1 notchless homolog 1 JBrowse link 11 82,900,768 82,908,445 RGD:2290270
G Palb2 partner and localizer of BRCA2 JBrowse link 7 122,107,262 122,132,980 RGD:2290270
G Pax1 paired box 1 JBrowse link 2 147,361,918 147,375,049 RGD:2290270
G Pcdh8 protocadherin 8 JBrowse link 14 79,766,772 79,771,312 RGD:2290270
G Plxna2 plexin A2 JBrowse link 1 194,619,829 194,816,869 RGD:2290270
G Pofut1 protein O-fucosyltransferase 1 JBrowse link 2 153,241,532 153,271,029 RGD:2290270
G Poglut1 protein O-glucosyltransferase 1 JBrowse link 16 38,525,058 38,550,257 RGD:2290270
G Prkdc protein kinase, DNA activated, catalytic polypeptide JBrowse link 16 15,637,443 15,842,252 RGD:2290270
G Psen1 presenilin 1 JBrowse link 12 83,688,145 83,738,446 RGD:2290270
G Psen2 presenilin 2 JBrowse link 1 180,227,004 180,263,478 RGD:2290270
G Rbpj recombination signal binding protein for immunoglobulin kappa J region JBrowse link 5 53,466,115 53,657,445 RGD:2290270
G Ripply2 ripply transcriptional repressor 2 JBrowse link 9 87,015,376 87,020,441 RGD:2290270
G Ror2 receptor tyrosine kinase-like orphan receptor 2 JBrowse link 13 53,109,317 53,286,109 RGD:2290270
G Sema3c sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C JBrowse link 5 17,574,816 17,730,268 RGD:2290270
G Sfrp1 secreted frizzled-related protein 1 JBrowse link 8 23,411,382 23,449,632 RGD:2290270
G Sfrp2 secreted frizzled-related protein 2 JBrowse link 3 83,766,158 83,774,314 RGD:2290270
G Smad3 SMAD family member 3 JBrowse link 9 63,646,766 63,757,994 RGD:2290270
G T brachyury, T-box transcription factor T JBrowse link 17 8,422,178 8,442,496 RGD:2290270
G Tbx18 T-box18 JBrowse link 9 87,702,800 87,731,260 RGD:2290270
G Tcap titin-cap JBrowse link 11 98,383,811 98,384,953 RGD:2290270
G Tcf15 transcription factor 15 JBrowse link 2 152,143,049 152,149,097 RGD:2290270
G Tmed2 transmembrane p24 trafficking protein 2 JBrowse link 5 124,540,791 124,550,503 RGD:2290270
G Trp53 transformation related protein 53 JBrowse link 11 69,580,359 69,591,873 RGD:2290270
G Ttn titin JBrowse link 2 76,703,980 76,982,557 RGD:2290270
G Wnt3a wingless-type MMTV integration site family, member 3A JBrowse link 11 59,248,036 59,290,751 RGD:2290270
G Wnt5a wingless-type MMTV integration site family, member 5A JBrowse link 14 28,505,473 28,527,448 RGD:2290270
G Xrcc2 X-ray repair complementing defective repair in Chinese hamster cells 2 JBrowse link 5 25,689,814 25,705,797 RGD:2290270
G Zeb2 zinc finger E-box binding homeobox 2 JBrowse link 2 44,983,512 45,117,442 RGD:2290270
specification of animal organ identity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tbr1 T-box brain gene 1 JBrowse link 2 61,802,732 61,814,114 RGD:2290270
specification of animal organ position term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp4 bone morphogenetic protein 4 JBrowse link 14 46,383,525 46,390,669 RGD:2290270
G Hoxa3 homeobox A3 JBrowse link 6 52,169,062 52,213,067 RGD:2290270
G Tbx3 T-box 3 JBrowse link 5 119,670,319 119,684,724 RGD:2290270
specification of anterior mesonephric tubule identity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Osr1 odd-skipped related transcription factor 1 JBrowse link 12 9,574,442 9,581,500 RGD:2290270
specification of axis polarity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ahi1 Abelson helper integration site 1 JBrowse link 10 20,952,490 21,080,429 RGD:2290270
G Bcor BCL6 interacting corepressor JBrowse link X 12,036,737 12,160,528 RGD:2290270
specification of loop of Henle identity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hes5 hes family bHLH transcription factor 5 JBrowse link 4 154,960,289 154,962,372 RGD:2290270
G Irx1 Iroquois homeobox 1 JBrowse link 13 71,958,232 71,963,723 RGD:2290270
G Irx2 Iroquois homeobox 2 JBrowse link 13 72,628,797 72,634,196 RGD:2290270
G Irx3 Iroquois related homeobox 3 JBrowse link 8 91,798,511 91,801,654 RGD:2290270
specification of posterior mesonephric tubule identity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Osr1 odd-skipped related transcription factor 1 JBrowse link 12 9,574,442 9,581,500 RGD:2290270
specification of ureteric bud anterior/posterior symmetry by BMP signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp4 bone morphogenetic protein 4 JBrowse link 14 46,383,525 46,390,669 RGD:2290270
spinal cord anterior/posterior patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gdf11 growth differentiation factor 11 JBrowse link 10 128,884,546 128,891,718 RGD:2290270
spinal cord dorsal/ventral patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fuz fuzzy planar cell polarity protein JBrowse link 7 44,896,079 44,900,624 RGD:2290270
G Gli2 GLI-Kruppel family member GLI2 JBrowse link 1 118,834,061 119,053,619 RGD:2290270
G Gli3 GLI-Kruppel family member GLI3 JBrowse link 13 15,463,723 15,730,026 RGD:2290270
G Ift88 intraflagellar transport 88 JBrowse link 14 57,424,069 57,517,936 RGD:2290270
G Intu inturned planar cell polarity protein JBrowse link 3 40,531,291 40,704,776 RGD:2290270
G Rab23 RAB23, member RAS oncogene family JBrowse link 1 33,719,888 33,742,564 RGD:2290270
G Shh sonic hedgehog JBrowse link 5 28,456,840 28,467,101 RGD:2290270
G Sufu SUFU negative regulator of hedgehog signaling JBrowse link 19 46,396,896 46,488,804 RGD:2290270
spinal cord patterning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Reln reelin JBrowse link 5 21,884,454 22,344,705 RGD:2290270
telencephalon regionalization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp2 bone morphogenetic protein 2 JBrowse link 2 133,552,159 133,562,896 RGD:2290270
G Bmp4 bone morphogenetic protein 4 JBrowse link 14 46,383,525 46,390,669 RGD:2290270
G Gsx2 GS homeobox 2 JBrowse link 5 75,075,601 75,077,893 RGD:2290270
G Lhx2 LIM homeobox protein 2 JBrowse link 2 38,339,281 38,369,737 RGD:2290270
G Otx2 orthodenticle homeobox 2 JBrowse link 14 48,657,452 48,667,644 RGD:2290270
G Pax6 paired box 6 JBrowse link 2 105,668,896 105,698,410 RGD:2290270
G Shh sonic hedgehog JBrowse link 5 28,456,840 28,467,101 RGD:2290270
G Six3 sine oculis-related homeobox 3 JBrowse link 17 85,613,608 85,626,191 RGD:2290270
thorax and anterior abdomen determination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Neurog1 neurogenin 1 JBrowse link 13 56,250,492 56,252,163 RGD:2290270
G Tifab TRAF-interacting protein with forkhead-associated domain, family member B JBrowse link 13 56,173,703 56,179,013 RGD:2290270
G Wt1 Wilms tumor 1 homolog JBrowse link 2 105,126,529 105,173,614 RGD:2290270
transforming growth factor beta receptor signaling pathway involved in primitive streak formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nodal nodal JBrowse link 10 61,417,972 61,425,337 RGD:2290270
ventral midline determination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Smo smoothened, frizzled class receptor JBrowse link 6 29,735,497 29,761,366 RGD:2290270
ventral spinal cord interneuron fate commitment term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ascl1 achaete-scute family bHLH transcription factor 1 JBrowse link 10 87,491,041 87,493,660 RGD:2290270
G Dll4 delta like canonical Notch ligand 4 JBrowse link 2 119,325,784 119,335,666 RGD:2290270
G Foxn4 forkhead box N4 JBrowse link 5 114,254,164 114,274,600 RGD:2290270
ventral spinal cord interneuron fate determination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nkx2-2 NK2 homeobox 2 JBrowse link 2 147,177,546 147,195,784 RGD:2290270
ventral spinal cord interneuron specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dbx1 developing brain homeobox 1 JBrowse link 7 49,631,499 49,636,835 RGD:2290270
G Dmrt3 doublesex and mab-3 related transcription factor 3 JBrowse link 19 25,610,246 25,623,921 RGD:2290270
G Lhx3 LIM homeobox protein 3 JBrowse link 2 26,200,212 26,208,249 RGD:2290270
G Shh sonic hedgehog JBrowse link 5 28,456,840 28,467,101 RGD:2290270
G Sox1 SRY (sex determining region Y)-box 1 JBrowse link 8 12,395,519 12,399,555 RGD:2290270
ventral trunk neural crest cell migration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nrp1 neuropilin 1 JBrowse link 8 128,358,283 128,505,476 RGD:2290270
G Nrp2 neuropilin 2 JBrowse link 1 62,703,317 62,818,692 RGD:2290270
G Sema3a sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A JBrowse link 5 13,125,370 13,606,234 RGD:2290270
G Sema3f sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F JBrowse link 9 107,681,499 107,710,475 RGD:2290270
vertebrate eye-specific patterning term browser