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ONTOLOGY REPORT - ANNOTATIONS


Term:foregut morphogenesis
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Accession:GO:0007440 term browser browse the term
Definition:The process in which the anatomical structures of the foregut are generated and organized.


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foregut morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Notch1 notch receptor 1 ISO MGI:2684314|MGI:2684317 (MGI:3603059|PMID:16107537) RGD PMID:16107537 MGI:3603059 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
embryonic foregut morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr2b activin A receptor type 2B IEA
ISO
GO_REF:0000107
MGI:1857709 (MGI:1861876|PMID:10921901)
Ensembl
RGD
PMID:10921901 GO_REF:0000107, MGI:1861876 NCBI chr 8:128,087,308...128,126,776
Ensembl chr 8:128,087,345...128,118,746
JBrowse link
G Ctnnb1 catenin beta 1 IEA
ISO
GO_REF:0000107
MGI:2148567 (MGI:3820452|PMID:18692041)
Ensembl
RGD
PMID:18692041 GO_REF:0000107, MGI:3820452 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 ISO MGI:3822451 (MGI:3821807|PMID:18794329) RGD PMID:18794329 MGI:3821807 NCBI chr13:35,622,472...35,673,449
Ensembl chr13:35,580,098...35,668,968
JBrowse link
G Foxf1 forkhead box F1 ISO MGI:1929432 (MGI:2135612|PMID:11493558) RGD PMID:11493558 MGI:2135612 NCBI chr19:53,012,306...53,016,100
Ensembl chr19:53,012,332...53,016,086
JBrowse link
G Foxp4 forkhead box P4 ISO MGI:3055161 (MGI:3054576|PMID:15361625) RGD PMID:15361625 MGI:3054576 NCBI chr 9:15,068,378...15,124,962
Ensembl chr 9:15,068,399...15,125,318
JBrowse link
G Gata4 GATA binding protein 4 ISO MGI:2179443|MGI:2386265 (MGI:87488|PMID:9136932), (MGI:87489|PMID:9136933) RGD PMID:9136932, PMID:9136933 MGI:87488, MGI:87489 NCBI chr15:46,386,703...46,458,679
Ensembl chr15:46,386,712...46,432,965
JBrowse link
G Nckap1 NCK-associated protein 1 ISO MGI:3578145 (MGI:3701029|PMID:16831833) RGD PMID:16831833 MGI:3701029 NCBI chr 3:67,725,180...67,804,680
Ensembl chr 3:67,725,947...67,787,990
JBrowse link
G Shh sonic hedgehog signaling molecule IEA
ISO
GO_REF:0000107
MGI:1857796 (MGI:1277744|PMID:9731532)
Ensembl
RGD
PMID:9731532 GO_REF:0000107, MGI:1277744 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Smad2 SMAD family member 2 ISO MGI:1201674 (MGI:3618021|PMID:15183723) RGD PMID:15183723 MGI:3618021 NCBI chr18:72,550,107...72,612,078
Ensembl chr18:72,550,219...72,612,078
JBrowse link
G Smad3 SMAD family member 3 ISO MGI:108051 (MGI:3618021|PMID:15183723) RGD PMID:15183723 MGI:3618021 NCBI chr 8:68,569,530...68,678,349
Ensembl chr 8:68,569,530...68,678,349
JBrowse link
G Sox17 SRY-box transcription factor 17 ISO MGI:2179440|MGI:3717118|MGI:4356113 (MGI:4355651|PMID:19619492), (MGI:4415813|PMID:18462699), (MGI:4946573|PMID:21305474) RGD PMID:18462699, PMID:19619492, PMID:21305474 MGI:4355651, MGI:4415813, MGI:4946573 NCBI chr 5:14,890,318...14,895,907
Ensembl chr 5:14,890,408...14,895,907
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    developmental process 6826
      anatomical structure morphogenesis 2879
        foregut morphogenesis 12
          embryonic foregut morphogenesis 11
          post-embryonic foregut morphogenesis 0
Path 2
Term Annotations click to browse term
  biological_process 20020
    developmental process 6826
      anatomical structure development 6268
        multicellular organism development 5743
          system development 5279
            digestive system development 179
              digestive tract development 164
                digestive tract morphogenesis 57
                  foregut morphogenesis 12
                    embryonic foregut morphogenesis 11
                    post-embryonic foregut morphogenesis 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.