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ONTOLOGY REPORT - ANNOTATIONS


Term:excretion
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Accession:GO:0007588 term browser browse the term
Definition:The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds.
Synonyms:xref: Wikipedia:Excretion


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excretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcg5 ATP binding cassette subfamily G member 5 ISO UniProtKB:Q99PE8 (PMID:14504269)
(MGI:2681374|PMID:14504269)
RGD PMID:14504269 MGI:2681374 NCBI chr 6:7,935,771...7,961,207
Ensembl chr 6:7,935,771...7,961,207
JBrowse link
G Abcg8 ATP binding cassette subfamily G member 8 ISO UniProtKB:Q9DBM0 (PMID:14504269)
(MGI:2681374|PMID:14504269)
RGD PMID:14504269 MGI:2681374 NCBI chr 6:7,961,413...7,980,708
Ensembl chr 6:7,961,413...7,980,708
JBrowse link
G Agt angiotensinogen ISO MGI:2136636 (MGI:3618038|PMID:9557921) RGD PMID:9557921 MGI:3618038 NCBI chr19:57,321,594...57,333,460
Ensembl chr19:57,321,640...57,333,433
JBrowse link
G Amn amnion associated transmembrane protein ISO MGI:2135304|MGI:2135454 (MGI:3578036|PMID:15342463) RGD PMID:15342463 MGI:3578036 NCBI chr 6:135,724,455...135,731,896
Ensembl chr 6:135,724,455...135,731,896
JBrowse link
G Atp6v0a4 ATPase H+ transporting V0 subunit a4 ISO (PMID:12414817) RGD PMID:12414817 NCBI chr 4:65,736,585...65,821,916
Ensembl chr 4:65,736,585...65,818,521
JBrowse link
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 ISS
ISO
GO_REF:0000024
(PMID:12414817), (PMID:19478356)
UniProt
RGD
PMID:12414817, PMID:19478356 GO_REF:0000024 NCBI chr 4:115,417,100...115,435,754
Ensembl chr 4:115,416,580...115,437,206
JBrowse link
G Dab2 DAB adaptor protein 2 ISO MGI:2387168 (MGI:2178022|PMID:11927540) RGD PMID:11927540 MGI:2178022 NCBI chr 2:55,747,353...55,768,848
Ensembl chr 2:55,747,318...55,768,270
JBrowse link
G Grhpr glyoxylate and hydroxypyruvate reductase ISO (PMID:10484776) RGD PMID:10484776 NCBI chr 5:60,528,981...60,538,410
Ensembl chr 5:60,528,997...60,538,375
JBrowse link
G Guca2b guanylate cyclase activator 2B ISO MGI:2679505 (MGI:2678878|PMID:14561709) RGD PMID:14561709 MGI:2678878 NCBI chr 5:138,695,591...138,697,641
Ensembl chr 5:138,695,591...138,697,641
JBrowse link
G Kirrel1 kirre like nephrin family adhesion molecule 1 ISO MGI:2388348 (MGI:2157763|PMID:11416156) RGD PMID:11416156 MGI:2157763 NCBI chr 2:186,420,743...186,515,209
Ensembl chr 2:186,420,795...186,515,135
JBrowse link
G Mllt6 MLLT6, PHD finger containing ISO MGI:3856248 (MGI:5644399|PMID:21546577) RGD PMID:21546577 MGI:5644399 NCBI chr10:85,607,988...85,628,171
Ensembl chr10:85,608,544...85,625,854
JBrowse link
G Nr3c2 nuclear receptor subfamily 3, group C, member 2 ISO MGI:2441654 (MGI:2181312|PMID:9689096) RGD PMID:9689096 MGI:2181312 NCBI chr19:34,408,275...34,761,003
Ensembl chr19:34,448,289...34,752,695
JBrowse link
G Pou3f3 POU class 3 homeobox 3 IEA
ISO
GO_REF:0000107
MGI:3712282 (MGI:3710076|PMID:17264314)
Ensembl
RGD
PMID:17264314 GO_REF:0000107, MGI:3710076 NCBI chr 9:49,479,148...49,482,246
Ensembl chr 9:49,479,023...49,482,252
JBrowse link
G Slc12a1 solute carrier family 12 member 1 ISO MGI:3712283 (MGI:3710076|PMID:17264314) RGD PMID:17264314 MGI:3710076 NCBI chr 3:117,421,531...117,498,372
Ensembl chr 3:117,421,604...117,498,367
JBrowse link
G Umod uromodulin IEA
ISO
GO_REF:0000107
MGI:3712284 (MGI:3710076|PMID:17264314)
Ensembl
RGD
PMID:17264314 GO_REF:0000107, MGI:3710076 NCBI chr 1:189,186,027...189,199,939
Ensembl chr 1:189,186,026...189,199,376
JBrowse link
defecation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mdk midkine ISO (MGI:2178952|PMID:10096022) RGD PMID:10096022 MGI:2178952 NCBI chr 3:80,841,003...80,843,895
Ensembl chr 3:80,841,005...80,842,916
JBrowse link
micturition term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1a adrenoceptor alpha 1A IMP RGD PMID:20668103 RGD:5688347 NCBI chr15:43,296,997...43,398,314
Ensembl chr15:43,298,794...43,392,451
JBrowse link
G Adra1d adrenoceptor alpha 1D IMP RGD PMID:20668103 RGD:5688347 NCBI chr 3:124,129,558...124,145,566
Ensembl chr 3:124,129,558...124,145,566
JBrowse link
G Htr7 5-hydroxytryptamine receptor 7 IMP RGD PMID:12967934 RGD:6480687 NCBI chr 1:254,547,964...254,671,811
Ensembl chr 1:254,547,620...254,671,778
JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 ISO (PMID:11641143)
MGI:3053849 (MGI:3053479|PMID:15184377)
RGD PMID:11641143, PMID:15184377 MGI:3053479 NCBI chr15:344,204...1,048,849
Ensembl chr15:344,360...1,047,956
JBrowse link
G Psap prosaposin IEA
ISO
GO_REF:0000107
MGI:2183897 (MGI:2183819|PMID:11371512)
Ensembl
RGD
PMID:11371512 GO_REF:0000107, MGI:2183819 NCBI chr20:29,831,302...29,856,876
Ensembl chr20:29,831,314...29,856,875
JBrowse link
negative regulation of defecation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crhr2 corticotropin releasing hormone receptor 2 IMP RGD PMID:21277852 RGD:5491003 NCBI chr 4:85,286,371...85,329,374
Ensembl chr 4:85,286,372...85,329,362
JBrowse link
G Npsr1 neuropeptide S receptor 1 IMP RGD PMID:21708257 RGD:9831204 NCBI chr 8:25,246,174...25,483,582
Ensembl chr 8:25,246,292...25,482,647
JBrowse link
negative regulation of renal phosphate excretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stc1 stanniocalcin 1 ISO (PMID:8700837) RGD PMID:8700837 NCBI chr15:50,891,137...50,901,791
Ensembl chr15:50,891,127...50,903,162
JBrowse link
negative regulation of renal sodium excretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace angiotensin I converting enzyme IMP RGD PMID:2966592 RGD:12880016 NCBI chr10:94,170,766...94,213,831
Ensembl chr10:94,170,766...94,187,822
JBrowse link
G Adora1 adenosine A1 receptor IMP RGD PMID:14993484 RGD:1625254 NCBI chr13:51,042,111...51,076,913
Ensembl chr13:51,042,248...51,076,852
JBrowse link
G Anpep alanyl aminopeptidase, membrane IMP RGD PMID:19996063 RGD:5131447 NCBI chr 1:141,561,364...141,604,249
Ensembl chr 1:141,561,334...141,604,273
JBrowse link
G Avpr2 arginine vasopressin receptor 2 IMP RGD PMID:18596120 RGD:2301931 NCBI chr  X:156,889,006...156,892,707
Ensembl chr  X:156,889,410...156,891,213
JBrowse link
G Comt catechol-O-methyltransferase IMP RGD PMID:10450019 RGD:8662342 NCBI chr11:86,715,981...86,735,630
Ensembl chr11:86,715,981...86,735,622
JBrowse link
G Gnas GNAS complex locus IMP RGD PMID:21895632 RGD:5509797 NCBI chr 3:172,374,957...172,434,988
Ensembl chr 3:172,374,957...172,428,483
Ensembl chr 3:172,374,957...172,428,483
JBrowse link
G Spx spexin hormone IDA PMID:22038051 UniProt PMID:22038051 RGD:8693358 NCBI chr 4:176,629,597...176,635,698
Ensembl chr 4:176,629,800...176,641,008
JBrowse link
G Uts2 urotensin 2 IDA RGD PMID:16531985 RGD:2306837 NCBI chr 5:168,078,748...168,084,133
Ensembl chr 5:168,078,748...168,084,145
JBrowse link
G Uts2r urotensin 2 receptor IMP RGD PMID:16531985 RGD:2306837 NCBI chr10:110,364,291...110,365,451
Ensembl chr10:110,364,291...110,365,451
JBrowse link
positive regulation of renal sodium excretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2a adenosine A2a receptor IMP
IDA
in renal medulla RGD PMID:10070140, PMID:10070140 RGD:628573, RGD:628573 NCBI chr20:14,265,251...14,282,873
Ensembl chr20:14,265,252...14,282,873
JBrowse link
G Agt angiotensinogen IMP
IDA
RGD PMID:16380540, PMID:22689743 RGD:1582118, RGD:8549474 NCBI chr19:57,321,594...57,333,460
Ensembl chr19:57,321,640...57,333,433
JBrowse link
G Agtr2 angiotensin II receptor, type 2 IMP RGD PMID:16380540 RGD:1582118 NCBI chr  X:119,389,480...119,393,845
Ensembl chr  X:119,390,013...119,393,842
JBrowse link
G Avpr1a arginine vasopressin receptor 1A IMP RGD PMID:18596120 RGD:2301931 NCBI chr 7:67,341,366...67,345,290
Ensembl chr 7:67,341,080...67,345,308
JBrowse link
G Drd2 dopamine receptor D2 ISO MGI:1857875 (MGI:3608592|PMID:11566895) RGD PMID:11566895 MGI:3608592 NCBI chr 8:53,678,777...53,743,643
Ensembl chr 8:53,678,777...53,743,642
JBrowse link
G Drd3 dopamine receptor D3 IDA RGD PMID:14621190 RGD:1581467 NCBI chr11:61,819,102...61,883,223
Ensembl chr11:61,822,077...61,874,327
JBrowse link
G Edn1 endothelin 1 ISO MGI:3044563|MGI:3054057 (MGI:3051206|PMID:15314687) RGD PMID:15314687 MGI:3051206 NCBI chr17:22,136,814...22,143,745
Ensembl chr17:22,137,324...22,143,324
JBrowse link
G Ednrb endothelin receptor type B IMP RGD PMID:18305094 RGD:4892582 NCBI chr15:88,004,775...88,036,354
Ensembl chr15:88,006,977...88,036,354
JBrowse link
G Gnai2 G protein subunit alpha i2 IMP RGD PMID:22459149 RGD:13507313 NCBI chr 8:116,370,730...116,391,337
Ensembl chr 8:116,370,744...116,391,307
JBrowse link
G Nppb natriuretic peptide B IDA RGD PMID:8289999 RGD:7247315 NCBI chr 5:164,796,176...164,797,538
Ensembl chr 5:164,796,185...164,797,531
JBrowse link
G Oxt oxytocin/neurophysin I prepropeptide IDA RGD PMID:17559853 RGD:2304131 NCBI chr 3:123,106,694...123,107,534
Ensembl chr 3:123,106,694...123,107,534
JBrowse link
G Ptger4 prostaglandin E receptor 4 IMP RGD PMID:18287210 RGD:10003052 NCBI chr 2:54,951,625...54,966,470
Ensembl chr 2:54,952,821...54,963,448
JBrowse link
G Snx5 sorting nexin 5 IMP RGD PMID:23195037 RGD:13508622 NCBI chr 3:138,378,032...138,397,944
Ensembl chr 3:138,378,202...138,397,870
JBrowse link
G Tac1 tachykinin, precursor 1 IDA RGD PMID:18364471 RGD:2304318 NCBI chr 4:33,638,853...33,646,819
Ensembl chr 4:33,638,709...33,646,819
JBrowse link
G Tacr1 tachykinin receptor 1 IMP RGD PMID:18364471 RGD:2304318 NCBI chr 4:113,247,236...113,416,139
Ensembl chr 4:113,247,795...113,414,504
JBrowse link
positive regulation of smooth muscle contraction involved in micturition term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptger3 prostaglandin E receptor 3 IMP RGD PMID:18562635 RGD:10043314 NCBI chr 2:263,895,093...263,979,682
Ensembl chr 2:263,895,241...263,979,698
JBrowse link
regulation of excretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nphs1 NPHS1 adhesion molecule, nephrin IEA
ISO
GO_REF:0000107
(MGI:1929558|PMID:11136707)
Ensembl
RGD
PMID:11136707 GO_REF:0000107, MGI:1929558 NCBI chr 1:88,922,346...88,950,560
Ensembl chr 1:88,922,433...88,950,559
JBrowse link
G Slc9a3r1 SLC9A3 regulator 1 ISO MGI:2386785 (MGI:3687116|PMID:12952857), (MGI:3692157|PMID:16249272) RGD PMID:12952857, PMID:16249272 MGI:3687116, MGI:3692157 NCBI chr10:103,713,045...103,730,145
Ensembl chr10:103,713,045...103,730,145
JBrowse link
regulation of renal sodium excretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen IDA RGD PMID:11390024 RGD:1582107 NCBI chr19:57,321,594...57,333,460
Ensembl chr19:57,321,640...57,333,433
JBrowse link
G Avp arginine vasopressin IMP RGD PMID:18596120 RGD:2301931 NCBI chr 3:123,117,482...123,119,460
Ensembl chr 3:123,117,492...123,119,460
JBrowse link
G Corin corin, serine peptidase IMP
ISO
PMID:20613715
(MGI:5427566|PMID:22418978)
RGD PMID:22418978, PMID:20613715 MGI:5427566, RGD:8553515 NCBI chr14:38,247,379...38,474,931
Ensembl chr14:38,247,791...38,473,648
JBrowse link
renal potassium excretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin ISO (MGI:4455253|PMID:20219947) RGD PMID:20219947 MGI:4455253 NCBI chr 1:197,986,384...197,999,726
Ensembl chr 1:197,986,385...197,997,664
JBrowse link
G Mllt6 MLLT6, PHD finger containing ISO MGI:3856248 (MGI:5644399|PMID:21546577) RGD PMID:21546577 MGI:5644399 NCBI chr10:85,607,988...85,628,171
Ensembl chr10:85,608,544...85,625,854
JBrowse link
G Slc5a2 solute carrier family 5 member 2 IMP RGD PMID:29790389 RGD:13673897 NCBI chr 1:199,682,688...199,688,809
Ensembl chr 1:199,682,688...199,688,809
JBrowse link
renal sodium excretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 ISO MGI:2673510 (MGI:5529401|PMID:24051376) RGD PMID:24051376 MGI:5529401 NCBI chr 4:115,417,100...115,435,754
Ensembl chr 4:115,416,580...115,437,206
JBrowse link
G Mllt6 MLLT6, PHD finger containing ISO MGI:3856248 (MGI:5644399|PMID:21546577) RGD PMID:21546577 MGI:5644399 NCBI chr10:85,607,988...85,628,171
Ensembl chr10:85,608,544...85,625,854
JBrowse link
smooth muscle contraction involved in micturition term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1c calcium voltage-gated channel subunit alpha1 C ISO MGI:2674119 (MGI:3699638|PMID:15132976) RGD PMID:15132976 MGI:3699638 NCBI chr 4:150,635,808...151,270,790
Ensembl chr 4:150,641,066...150,829,913
JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 IEA
ISO
GO_REF:0000107
MGI:3053849 (MGI:3612609|PMID:15827347)
(PMID:11641143)
Ensembl
RGD
PMID:11641143, PMID:15827347 GO_REF:0000107, MGI:3612609 NCBI chr15:344,204...1,048,849
Ensembl chr15:344,360...1,047,956
JBrowse link
G Tacr1 tachykinin receptor 1 IMP RGD PMID:18945947 RGD:2304258 NCBI chr 4:113,247,236...113,416,139
Ensembl chr 4:113,247,795...113,414,504
JBrowse link
G Trpv1 transient receptor potential cation channel, subfamily V, member 1 ISO MGI:1934023 (MGI:2385968|PMID:12161756) RGD PMID:12161756 MGI:2385968 NCBI chr10:59,799,123...59,824,208
Ensembl chr10:59,799,123...59,824,679
JBrowse link
smooth muscle relaxation of the bladder outlet term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdkrb1 bradykinin receptor B1 ISO (PMID:23846981) RGD PMID:23846981 NCBI chr 6:129,437,423...129,441,553
Ensembl chr 6:129,438,158...129,440,574
JBrowse link
G Pgr progesterone receptor ISO (PMID:24296318) RGD PMID:24296318 NCBI chr 8:7,128,656...7,187,796
Ensembl chr 8:7,128,656...7,187,796
JBrowse link
synaptic transmission involved in micturition term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrna3 cholinergic receptor nicotinic alpha 3 subunit IEA
ISO
GO_REF:0000107
MGI:2155602 (MGI:3607823|PMID:10771006)
(PMID:11450844)
Ensembl
RGD
PMID:10771006, PMID:11450844 GO_REF:0000107, MGI:3607823 NCBI chr 8:59,594,007...59,607,122
Ensembl chr 8:59,592,403...59,607,275
JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit ISO MGI:87892 (MGI:2156010|PMID:10531434) RGD PMID:10531434 MGI:2156010 NCBI chr 2:189,088,570...189,096,785
Ensembl chr 2:189,088,570...189,096,785
JBrowse link
G Chrnb4 cholinergic receptor nicotinic beta 4 subunit ISO (PMID:11450844)
MGI:2158716|MGI:87891 (MGI:2156010|PMID:10531434), (MGI:3607823|PMID:10771006)
RGD PMID:10531434, PMID:10771006, PMID:11450844 MGI:2156010, MGI:3607823 NCBI chr 8:59,610,489...59,629,073
Ensembl chr 8:59,609,693...59,629,133
JBrowse link
urate salt excretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcg2 ATP binding cassette subfamily G member 2 IEP
ISO
(PMID:19506252) RGD PMID:19506252, PMID:28679589 RGD:13439745 NCBI chr 4:88,765,441...88,890,268
Ensembl chr 4:88,832,178...88,890,621
JBrowse link
G Slc22a12 solute carrier family 22 member 12 IEP RGD PMID:28679589 RGD:13439745 NCBI chr 1:221,910,787...221,919,277
Ensembl chr 1:221,910,767...221,919,301
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    multicellular organismal process 9047
      system process 3456
        excretion 63
          defecation + 3
          micturition + 14
          regulation of excretion + 32
          renal phosphate excretion + 1
          renal potassium excretion 3
          renal sodium excretion + 28
          urate salt excretion 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.