ONTOLOGY REPORT - ANNOTATIONS


Term:cell recognition
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Accession:GO:0008037 term browser browse the term
Definition:The process in which a cell in an organism interprets its surroundings.
Synonyms:exact_synonym: recognition of surroundings by cell


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cell recognition term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cadm1 cell adhesion molecule 1 JBrowse link 8 51,858,906 52,200,591 RGD:1624291
RGD:1600115
G Clec7a C-type lectin domain containing 7A JBrowse link 4 163,216,152 163,227,367 RGD:1624291
G Crtam cytotoxic and regulatory T cell molecule JBrowse link 8 45,152,584 45,216,082 RGD:1624291
RGD:1600115
axon choice point recognition term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Efnb3 ephrin B3 JBrowse link 10 56,161,431 56,168,819 RGD:1624291
RGD:1600115
G Gap43 growth associated protein 43 JBrowse link 11 58,624,198 58,717,916 RGD:1624291
RGD:13792537
axon midline choice point recognition term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G App amyloid beta precursor protein JBrowse link 11 24,425,013 24,641,872 RGD:1624291
RGD:1600115
G Foxg1 forkhead box G1 JBrowse link 6 69,971,227 69,974,037 RGD:1624291
RGD:1600115
G Robo1 roundabout guidance receptor 1 JBrowse link 11 9,079,291 10,146,302 RGD:2314842
RGD:1624291
G Robo2 roundabout guidance receptor 2 JBrowse link 11 11,062,866 12,618,793 RGD:1624291
G Robo3 roundabout guidance receptor 3 JBrowse link 8 39,892,792 39,923,735 RGD:1624291
RGD:1600115
axonal fasciculation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Amigo1 adhesion molecule with Ig like domain 1 JBrowse link 2 210,977,125 210,982,582 RGD:634626
G Arhgap35 Rho GTPase activating protein 35 JBrowse link 1 78,456,409 78,573,374 RGD:1600115
RGD:1624291
G Casp3 caspase 3 JBrowse link 16 48,845,011 48,863,249 RGD:13781947
G Casp6 caspase 6 JBrowse link 2 235,341,326 235,353,715 RGD:13781947
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 JBrowse link 10 67,862,054 67,863,255 RGD:1624291
RGD:1600115
G Celsr3 cadherin, EGF LAG seven-pass G-type receptor 3 JBrowse link 8 117,620,293 117,648,034 RGD:1624291
RGD:1600115
G Cnr1 cannabinoid receptor 1 JBrowse link 5 49,307,584 49,333,064 RGD:1624291
RGD:1600115
G Cntn2 contactin 2 JBrowse link 13 49,280,913 49,314,061 RGD:1624291
RGD:1600115
G Crtac1 cartilage acidic protein 1 JBrowse link 1 261,527,009 261,669,614 RGD:1624291
RGD:1600115
G Efna5 ephrin A5 JBrowse link 9 110,054,002 110,329,878 RGD:728210
G Ephb2 Eph receptor B2 JBrowse link 5 155,024,478 155,143,539 RGD:1624291
RGD:1600115
G Ephb3 Eph receptor B3 JBrowse link 11 83,527,960 83,546,742 RGD:1624291
RGD:1600115
G Fezf2 Fez family zinc finger 2 JBrowse link 15 12,825,333 12,831,496 RGD:1624291
RGD:1600115
G L1cam L1 cell adhesion molecule JBrowse link X 156,901,244 156,928,064 RGD:11570517
G Ncam1 neural cell adhesion molecule 1 JBrowse link 8 53,836,797 54,134,881 RGD:11570517
G Ncam2 neural cell adhesion molecule 2 JBrowse link 11 19,669,922 20,705,063 RGD:1303997
G Ndn necdin, MAGE family member JBrowse link 1 122,981,755 122,983,354 RGD:1624291
RGD:1600115
G Nrp1 neuropilin 1 JBrowse link 19 61,332,351 61,486,166 RGD:1624291
RGD:1600115
G Ptprz1 protein tyrosine phosphatase, receptor type Z1 JBrowse link 4 49,941,046 50,140,764 RGD:9590115
G Rtn4 reticulon 4 JBrowse link 14 114,126,931 114,174,459 RGD:8554113
RGD:13792537
RGD:1624291
RGD:1600115
G Sema3a semaphorin 3A JBrowse link 4 18,170,375 18,545,190 RGD:1624291
RGD:1600115
G Sema5a semaphorin 5A JBrowse link 2 85,377,318 85,808,970 RGD:8553809
G Tnfrsf21 TNF receptor superfamily member 21 JBrowse link 9 20,546,159 20,621,051 RGD:13781947
binding of sperm to zona pellucida term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acr acrosin JBrowse link 7 130,541,320 130,548,356 RGD:1624291
RGD:1600115
G Adam1a ADAM metallopeptidase domain 1A JBrowse link 12 40,533,731 40,536,632 RGD:1624291
G Adam3a ADAM metallopeptidase domain 3A JBrowse link 16 72,086,878 72,136,685 RGD:1624291
G Aldoa aldolase, fructose-bisphosphate A JBrowse link 1 198,228,387 198,233,988 RGD:1624291
G Arsa arylsulfatase A JBrowse link 7 130,446,644 130,452,632 RGD:1624291
RGD:1600115
G Atp8b3 ATPase phospholipid transporting 8B3 JBrowse link 7 12,043,764 12,063,668 RGD:1624291
RGD:1600115
G B4galt1 beta-1,4-galactosyltransferase 1 JBrowse link 5 57,121,768 57,168,610 RGD:1600115
RGD:1624291
G C4bpa complement component 4 binding protein, alpha JBrowse link 13 47,342,090 47,377,580 RGD:1624291
G Cct2 chaperonin containing TCP1 subunit 2 JBrowse link 7 60,106,532 60,122,779 RGD:1624291
RGD:1600115
G Cct3 chaperonin containing TCP1 subunit 3 JBrowse link 2 187,669,051 187,693,610 RGD:1624291
RGD:1600115
G Cct4 chaperonin containing TCP1 subunit 4 JBrowse link 14 107,767,392 107,780,270 RGD:1624291
RGD:1600115
G Cct5 chaperonin containing TCP1 subunit 5 JBrowse link 2 84,667,578 84,678,730 RGD:1624291
RGD:1600115
G Cct6a chaperonin containing TCP1 subunit 6A JBrowse link 12 30,491,584 30,501,813 RGD:1624291
G Cct7 chaperonin containing TCP1 subunit 7 JBrowse link 4 117,235,023 117,252,265 RGD:1624291
RGD:1600115
G Cct8 chaperonin containing TCP1 subunit 8 JBrowse link 11 27,130,172 27,141,881 RGD:1624291
RGD:1600115
G Clgn calmegin JBrowse link 19 24,545,257 24,578,527 RGD:1624291
RGD:1600115
G Crisp1 cysteine-rich secretory protein 1 JBrowse link 9 24,356,577 24,383,679 RGD:1624291
RGD:13792537
G Fetub fetuin B JBrowse link 11 81,648,890 81,660,472 RGD:1624291
RGD:13792537
RGD:1600115
G Glipr1l1 GLIPR1 like 1 JBrowse link 7 54,828,576 54,855,556 RGD:1624291
G Hist1h1t histone cluster 1 H1 family member t JBrowse link 17 43,675,190 43,675,934 RGD:1624291
G Hspa1b heat shock protein family A (Hsp70) member 1B JBrowse link 20 4,877,638 4,880,112 RGD:1624291
G Hspa1l heat shock protein family A (Hsp70) member 1 like JBrowse link 20 4,879,998 4,965,191 RGD:1624291
G Ly6k lymphocyte antigen 6 family member K JBrowse link 7 116,103,644 116,107,148 RGD:1624291
G Pcsk4 proprotein convertase subtilisin/kexin type 4 JBrowse link 7 12,247,498 12,255,721 RGD:1624291
RGD:1600115
G Prss37 serine protease 37 JBrowse link 4 68,337,498 68,349,286 RGD:1624291
RGD:1600115
G Smcp sperm mitochondria-associated cysteine-rich protein JBrowse link 2 192,775,425 192,780,631 RGD:1624291
G Spa17 sperm autoantigenic protein 17 JBrowse link 8 40,066,954 40,078,131 RGD:1600115
G Tcp1 t-complex 1 JBrowse link 1 48,025,664 48,033,343 RGD:1624291
RGD:1600115
G Tex101 testis expressed 101 JBrowse link 1 81,529,776 81,534,149 RGD:1624291
RGD:1600115
G Tnp2 transition protein 2 JBrowse link 10 4,953,898 4,954,626 RGD:1624291
RGD:1600115
G Ubap2l ubiquitin associated protein 2-like JBrowse link 2 189,334,341 189,400,334 RGD:1624291
RGD:1600115
G Vdac2 voltage-dependent anion channel 2 JBrowse link 15 2,634,622 2,648,548 RGD:1624291
RGD:1600115
G Zan zonadhesin JBrowse link 12 22,285,377 22,389,008 RGD:1624291
G Zp2 zona pellucida glycoprotein 2 JBrowse link 1 189,899,906 189,911,650 RGD:1600115
RGD:1624291
RGD:8554097
G Zp3 zona pellucida glycoprotein 3 JBrowse link 12 23,735,225 23,752,734 RGD:1600115
RGD:13792537
RGD:1624291
G Zp3r zona pellucida 3 receptor JBrowse link 13 47,286,375 47,331,213 RGD:1299568
G Zpbp zona pellucida binding protein JBrowse link 14 91,360,670 91,556,406 RGD:1624291
RGD:1600115
G Zpbp2 zona pellucida binding protein 2 JBrowse link 10 86,513,645 86,523,375 RGD:1624291
RGD:1600115
cell-cell recognition term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pcdha7 protocadherin alpha 7 JBrowse link 18 29,993,361 30,215,896 RGD:1624291
dendrite self-avoidance term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bsg basigin (Ok blood group) JBrowse link 7 12,875,536 12,882,753 RGD:13792537
G Cntn4 contactin 4 JBrowse link 4 137,785,166 138,787,527 RGD:13792537
G Dscam DS cell adhesion molecule JBrowse link 11 37,004,776 37,599,866 RGD:1600115
RGD:13792537
RGD:1624291
G Dscaml1 DS cell adhesion molecule-like 1 JBrowse link 8 49,733,835 50,056,115 RGD:1624291
RGD:13792537
G Emb embigin JBrowse link 2 49,682,763 49,733,475 RGD:13792537
G LOC100909761 myotilin-like JBrowse link 18 78,661,643 78,681,196 RGD:13792537
G LOC100912306 myotilin-like JBrowse link 9 37,727,934 37,747,498 RGD:13792537
G Myot myotilin JBrowse link 18 35,573,978 35,593,541 RGD:13792537
G Nexn nexilin (F actin binding protein) JBrowse link 2 257,452,937 257,484,607 RGD:13792537
G Nptn neuroplastin JBrowse link 8 63,379,062 63,445,694 RGD:13792537
G Nrcam neuronal cell adhesion molecule JBrowse link 6 64,297,843 64,867,408 RGD:13792537
G Tnn tenascin N JBrowse link 13 77,829,384 77,896,831 RGD:1624291
fasciculation of motor neuron axon term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Epha3 Eph receptor A3 JBrowse link 11 421,253 783,037 RGD:1624291
RGD:1600115
G Epha4 Eph receptor A4 JBrowse link 9 83,111,222 83,253,486 RGD:1624291
RGD:1600115
fasciculation of sensory neuron axon term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Epha3 Eph receptor A3 JBrowse link 11 421,253 783,037 RGD:1624291
RGD:1600115
G Epha4 Eph receptor A4 JBrowse link 9 83,111,222 83,253,486 RGD:1624291
RGD:1600115
G Megf8 multiple EGF-like-domains 8 JBrowse link 1 82,184,671 82,234,045 RGD:1600115
RGD:1624291
immunological synapse formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccl19 C-C motif chemokine ligand 19 JBrowse link 5 58,181,025 58,182,969 RGD:1624291
G Cd6 Cd6 molecule JBrowse link 1 226,848,399 226,887,259 RGD:1624291
G Cd81 Cd81 molecule JBrowse link 1 216,237,663 216,253,460 RGD:1600115
RGD:1624291
G Coro1a coronin 1A JBrowse link 1 198,123,883 198,128,890 RGD:1624291
G Dlg1 discs large MAGUK scaffold protein 1 JBrowse link 11 72,164,566 72,378,895 RGD:1624291
RGD:1600115
G Dock2 dedicator of cytokinesis 2 JBrowse link 10 19,181,512 19,603,171 RGD:1624291
G Dock8 dedicator of cytokinesis 8 JBrowse link 1 242,934,685 243,153,472 RGD:1624291
RGD:1600115
G Ephb1 Eph receptor B1 JBrowse link 8 110,376,954 110,813,193 RGD:10047256
G Git1 GIT ArfGAP 1 JBrowse link 10 62,656,000 62,664,467 RGD:10047256
G Msn moesin JBrowse link X 65,226,834 65,294,192 RGD:1600115
RGD:1624291
G Nck2 NCK adaptor protein 2 JBrowse link 9 50,246,767 50,373,307 RGD:10047256
G Prf1 perforin 1 JBrowse link 20 30,915,294 30,920,804 RGD:1600115
RGD:1624291
negative regulation of binding of sperm to zona pellucida term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Astl astacin like metalloendopeptidase JBrowse link 3 119,783,717 119,799,450 RGD:1624291
RGD:13792537
G Zp3 zona pellucida glycoprotein 3 JBrowse link 12 23,735,225 23,752,734 RGD:1624291
RGD:1600115
G Zp4 zona pellucida glycoprotein 4 JBrowse link 17 65,497,359 65,503,912 RGD:1600115
RGD:1624291
negative regulation of immunological synapse formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Havcr2 hepatitis A virus cellular receptor 2 JBrowse link 10 31,561,838 31,590,624 RGD:1624291
G Lgals3 galectin 3 JBrowse link 15 24,153,602 24,165,537 RGD:1624291
neuron recognition term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bdnf brain-derived neurotrophic factor JBrowse link 3 100,768,637 100,819,216 RGD:1624291
G Cxcr4 C-X-C motif chemokine receptor 4 JBrowse link 13 45,314,952 45,318,856 RGD:632605
phagocytosis, recognition term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adgrb1 adhesion G protein-coupled receptor B1 JBrowse link 7 115,766,484 115,828,514 RGD:1624291
G Cd36 CD36 molecule JBrowse link 4 14,150,309 14,191,498 RGD:1624291
G Clec4m C-type lectin domain family 4 member M JBrowse link 12 2,817,633 2,826,303 RGD:1624291
RGD:1600115
G Clec7a C-type lectin domain containing 7A JBrowse link 4 163,216,152 163,227,367 RGD:1624291
RGD:1600115
G Colec12 collectin sub-family member 12 JBrowse link 18 867,048 1,054,047 RGD:1624291
RGD:1600115
G Fcgr1a Fc fragment of IgG receptor Ia JBrowse link 2 198,430,536 198,439,453 RGD:1624291
G Fcgr2a Fc fragment of IgG receptor IIa JBrowse link 13 91,146,878 91,163,691 RGD:1624291
G Igh-6 immunoglobulin heavy chain 6 RGD:13792537
G Ighg1 immunoglobulin heavy constant gamma 1 JBrowse link 6 139,140,572 139,784,388 RGD:1624291
RGD:13792537
G Igkc immunoglobulin kappa constant RGD:13792537
G Igll1 immunoglobulin lambda-like polypeptide 1 JBrowse link 11 88,388,378 88,391,524 RGD:13792537
G LOC362795 immunoglobulin G heavy chain JBrowse link 6 138,192,156 138,201,560 RGD:13792537
G Mfge8 milk fat globule-EGF factor 8 protein JBrowse link 1 140,845,478 140,860,882 RGD:1624291
RGD:1600115
G RGD1564318 similar to immunoglobulin light chain variable region RGD:13792537
G Scarb1 scavenger receptor class B, member 1 JBrowse link 12 36,694,952 36,761,445 RGD:1304245
G Sirpa signal-regulatory protein alpha JBrowse link 3 122,113,735 122,152,478 RGD:1624291
G Tub tubby bipartite transcription factor JBrowse link 1 173,550,929 173,629,550 RGD:1624291
RGD:1600115
G Tulp1 tubby like protein 1 JBrowse link 20 7,931,673 7,943,601 RGD:1624291
positive regulation of glycoprotein biosynthetic process involved in immunological synapse formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccr7 C-C motif chemokine receptor 7 JBrowse link 10 87,057,335 87,067,444 RGD:1624291
RGD:1600115
positive regulation of immunological synapse formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccr7 C-C motif chemokine receptor 7 JBrowse link 10 87,057,335 87,067,444 RGD:1624291
RGD:1600115
recognition of apoptotic cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fcna ficolin A JBrowse link 3 2,850,006 2,853,230 RGD:1624291
G Fcnb ficolin B JBrowse link 3 6,617,816 6,626,193 RGD:1624291
RGD:1600115
G Jmjd6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase JBrowse link 10 105,781,752 105,787,803 RGD:1624291
RGD:1600115
G Megf10 multiple EGF-like domains 10 JBrowse link 18 52,215,652 52,366,212 RGD:1624291
RGD:1600115
G Pear1 platelet endothelial aggregation receptor 1 JBrowse link 2 187,114,219 187,134,209 RGD:1624291
RGD:1600115
G Scarb1 scavenger receptor class B, member 1 JBrowse link 12 36,694,952 36,761,445 RGD:1624291
RGD:1600115
RGD:1304245
regulation of binding of sperm to zona pellucida term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lcn11 lipocalin 11 JBrowse link 3 2,935,396 2,938,883 RGD:1624291
G Zan zonadhesin JBrowse link 12 22,285,377 22,389,008 RGD:1624291
sperm-egg recognition term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cd9 CD9 molecule JBrowse link 4 157,977,163 158,010,091 RGD:1600115
RGD:1624291
G Folr2 folate receptor beta JBrowse link 1 166,915,045 166,933,377 RGD:13792537
G Izumo1 izumo sperm-egg fusion 1 JBrowse link 1 101,603,222 101,608,977 RGD:1624291
RGD:1600115
G Izumo1r IZUMO1 receptor, JUNO JBrowse link 8 13,416,418 13,418,907 RGD:13792537
RGD:1624291
G Spaca3 sperm acrosome associated 3 JBrowse link 10 68,227,736 68,235,295 RGD:1624291
RGD:1600115
G Spesp1 sperm equatorial segment protein 1 JBrowse link 8 67,217,801 67,233,172 RGD:1624291
RGD:1600115
synaptic target recognition term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ywhaz tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta JBrowse link 7 75,573,553 75,598,295 RGD:1600115
RGD:1624291

Term paths to the root
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Term Annotations click to browse term
  biological_process 17896
    cellular process 16040
      cell recognition 136
        cell-cell recognition + 63
        cell-matrix recognition + 0
        neuron recognition + 48
        phagocytosis, recognition + 23
        recognition of pollen + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.