ONTOLOGY REPORT - ANNOTATIONS


Term:retrograde axonal transport
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Accession:GO:0008090 term browser browse the term
Definition:The directed movement of organelles or molecules along microtubules from the cell periphery toward the cell body in nerve cell axons.
Synonyms:exact_synonym: retrograde axon cargo transport


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retrograde axonal transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bsn bassoon (presynaptic cytomatrix protein) JBrowse link 8 116,873,721 116,965,396 RGD:12793047
G Dst dystonin JBrowse link 9 37,902,336 38,296,961 RGD:1624291
G Dync1h1 dynein cytoplasmic 1 heavy chain 1 JBrowse link 6 134,958,854 135,085,769 RGD:13792537
G Dynlrb1 dynein light chain roadblock-type 1 JBrowse link 3 150,761,329 150,782,493 RGD:633064
G Hap1 huntingtin-associated protein 1 JBrowse link 10 88,257,975 88,266,210 RGD:10047154
RGD:10047200
G Mgarp mitochondria-localized glutamic acid-rich protein JBrowse link 2 140,444,963 140,453,719 RGD:1624291
G Ndel1 nudE neurodevelopment protein 1-like 1 JBrowse link 10 55,398,919 55,456,654 RGD:1624291
RGD:1600115
G Nefl neurofilament light JBrowse link 15 44,799,378 44,803,251 RGD:1624291
RGD:1600115
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 JBrowse link 10 61,456,144 61,577,412 RGD:1624291
RGD:13792537
G Snapin SNAP-associated protein JBrowse link 2 189,878,159 189,880,743 RGD:1624291
RGD:1600115
G Sod1 superoxide dismutase 1 JBrowse link 11 30,363,282 30,368,858 RGD:1624291
RGD:1600115
G Tmem108 transmembrane protein 108 JBrowse link 8 111,968,568 112,265,623 RGD:1624291
positive regulation of retrograde dense core granule transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mecp2 methyl CpG binding protein 2 JBrowse link X 156,650,389 156,713,813 RGD:12790715
retrograde axonal protein transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dlg2 discs large MAGUK scaffold protein 2 JBrowse link 1 154,916,274 157,274,077 RGD:1600115
RGD:1624291
G Map1a microtubule-associated protein 1A JBrowse link 3 113,251,918 113,272,193 RGD:1624291
retrograde axonal transport of mitochondrion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actr10 actin related protein 10 JBrowse link 6 93,385,457 93,411,605 RGD:13792537
retrograde neuronal dense core vesicle transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Kif1a kinesin family member 1A JBrowse link 9 100,171,851 100,253,626 RGD:13514087
G Kif1b kinesin family member 1B JBrowse link 5 165,994,803 166,133,497 RGD:13514087
G Kif1c kinesin family member 1C JBrowse link 10 57,322,259 57,352,395 RGD:13514087
G Kif5a kinesin family member 5A JBrowse link 7 70,515,832 70,552,897 RGD:13514087
G Kif5b kinesin family member 5B JBrowse link 17 54,181,416 54,219,048 RGD:13514087

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17926
    cellular process 16077
      movement of cell or subcellular component 2020
        microtubule-based movement 277
          microtubule-based transport 185
            transport along microtubule 157
              axo-dendritic transport 79
                axonal transport 60
                  retrograde axonal transport 21
                    negative regulation of retrograde axon cargo transport + 0
                    positive regulation of retrograde axon cargo transport + 1
                    regulation of retrograde axon cargo transport + 1
                    retrograde axonal protein transport 2
                    retrograde axonal transport of mitochondrion 1
                    retrograde neuronal dense core vesicle transport + 6
                    retrograde synaptic vesicle transport 0
Path 2
Term Annotations click to browse term
  biological_process 17926
    localization 5991
      establishment of localization 4600
        transport 4460
          intracellular transport 1422
            cytoskeleton-dependent intracellular transport 169
              transport along microtubule 157
                axo-dendritic transport 79
                  axonal transport 60
                    retrograde axonal transport 21
                      negative regulation of retrograde axon cargo transport + 0
                      positive regulation of retrograde axon cargo transport + 1
                      regulation of retrograde axon cargo transport + 1
                      retrograde axonal protein transport 2
                      retrograde axonal transport of mitochondrion 1
                      retrograde neuronal dense core vesicle transport + 6
                      retrograde synaptic vesicle transport 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.