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ONTOLOGY REPORT - ANNOTATIONS


Term:spermidine biosynthetic process
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Accession:GO:0008295 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of spermidine, N-(3-aminopropyl)-1,4-diaminobutane.
Synonyms:exact_synonym: spermidine anabolism;   spermidine biosynthesis;   spermidine formation;   spermidine synthesis
 xref: MetaCyc:BSUBPOLYAMSYN-PWY;   MetaCyc:POLYAMINSYN3-PWY


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spermidine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agmat agmatinase JBrowse link 5 160,306,754 160,321,951 RGD:1600115
G Amd1 adenosylmethionine decarboxylase 1 JBrowse link 20 45,384,000 45,399,694 RGD:1578320
RGD:1624291
RGD:13792537
RGD:7242912
RGD:7242911
G LOC100912604 spermidine synthase-like JBrowse link 3 14,588,818 14,591,980 RGD:13792537
G Srm spermidine synthase JBrowse link 5 165,405,168 165,408,325 RGD:1359042
RGD:13792537
RGD:1624291
RGD:7242920
RGD:7242928
positive regulation of spermidine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Paox polyamine oxidase JBrowse link 1 212,578,444 212,603,722 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18157
    metabolic process 10837
      nitrogen compound metabolic process 9238
        ammonium ion metabolic process 180
          spermidine metabolic process 11
            spermidine biosynthetic process 5
              negative regulation of spermidine biosynthetic process 0
              positive regulation of spermidine biosynthetic process 1
              regulation of spermidine biosynthetic process + 1
Path 2
Term Annotations click to browse term
  biological_process 18157
    metabolic process 10837
      nitrogen compound metabolic process 9238
        organonitrogen compound metabolic process 6413
          amine metabolic process 90
            cellular amine metabolic process 82
              cellular biogenic amine metabolic process 47
                polyamine metabolic process 19
                  spermidine metabolic process 11
                    spermidine biosynthetic process 5
                      negative regulation of spermidine biosynthetic process 0
                      positive regulation of spermidine biosynthetic process 1
                      regulation of spermidine biosynthetic process + 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.