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ONTOLOGY REPORT - ANNOTATIONS


Term:methyl-CpG binding
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Accession:GO:0008327 term browser browse the term
Definition:Interacting selectively and non-covalently with a methylated cytosine/guanine dinucleotide.


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methyl-CpG binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdx1 caudal type homeo box 1 JBrowse link 18 56,337,485 56,355,477 RGD:1600115
RGD:1624291
G Cdx2 caudal type homeo box 2 JBrowse link 12 9,464,026 9,470,565 RGD:1624291
G Chtop chromatin target of PRMT1 JBrowse link 2 189,887,850 189,900,079 RGD:1624291
RGD:1600115
G Cxxc4 CXXC finger protein 4 JBrowse link 2 239,414,882 239,439,640 RGD:1624291
RGD:1600115
G Cxxc5 CXXC finger protein 5 JBrowse link 18 28,626,386 28,656,916 RGD:1624291
RGD:1600115
G Dnmt1 DNA methyltransferase 1 JBrowse link 8 21,922,515 21,968,495 RGD:1624291
RGD:1600115
G Erh ERH, mRNA splicing and mitosis factor JBrowse link 6 104,280,390 104,290,905 RGD:1624291
G Hoxb13 homeo box B13 JBrowse link 10 84,031,955 84,034,228 RGD:1624291
G Lhx4 LIM homeobox 4 JBrowse link 13 73,348,874 73,400,416 RGD:1624291
G LOC100911453 methylosome protein 50-like JBrowse link 2 208,420,223 208,430,276 RGD:1600115
RGD:13792537
G Lrwd1 leucine-rich repeats and WD repeat domain containing 1 JBrowse link 12 23,574,234 23,587,262 RGD:1624291
G Mbd1 methyl-CpG binding domain protein 1 JBrowse link 18 70,248,568 70,263,190 RGD:1624291
RGD:13792537
G Mbd2 methyl-CpG binding domain protein 2 JBrowse link 18 65,814,026 65,885,115 RGD:1624291
RGD:13792537
G Mbd3 methyl-CpG binding domain protein 3 JBrowse link 7 12,179,046 12,186,251 RGD:1624291
RGD:13792537
G Mbd3l1 methyl-CpG binding domain protein 3-like 1 JBrowse link 8 18,428,438 18,434,722 RGD:13792537
G Mecp2 methyl CpG binding protein 2 JBrowse link X 156,650,389 156,713,813 RGD:1359078
RGD:13792537
RGD:1624291
RGD:1600115
G Prmt1 protein arginine methyltransferase 1 JBrowse link 1 100,971,132 100,980,411 RGD:1624291
RGD:1600115
G Prmt5 protein arginine methyltransferase 5 JBrowse link 15 33,156,508 33,165,893 RGD:1624291
G Tet1 tet methylcytosine dioxygenase 1 JBrowse link 20 27,359,122 27,438,039 RGD:1624291
G Tet3 tet methylcytosine dioxygenase 3 JBrowse link 4 115,060,702 115,160,800 RGD:1624291
G Uhrf1 ubiquitin-like with PHD and ring finger domains 1 JBrowse link 9 10,738,211 10,758,403 RGD:1624291
G Wdr77 WD repeat domain 77 JBrowse link 2 208,577,292 208,587,263 RGD:1624291
RGD:13792537
RGD:1600115
G Zbtb21 zinc finger and BTB domain containing 21 JBrowse link 11 38,442,716 38,457,411 RGD:1624291
G Zbtb33 zinc finger and BTB domain containing 33 JBrowse link X 124,319,299 124,326,506 RGD:1624291
G Zbtb38 zinc finger and BTB domain containing 38 JBrowse link 8 104,566,999 104,694,890 RGD:1600115
RGD:1624291
G Zbtb4 zinc finger and BTB domain containing 4 JBrowse link 10 56,367,586 56,388,296 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 19678
    binding 16040
      small molecule binding 2614
        nucleotide binding 2160
          methyl-CpG binding 26
Path 2
Term Annotations click to browse term
  molecular_function 19678
    binding 16040
      heterocyclic compound binding 5743
        nucleic acid binding 3671
          DNA binding 2034
            sequence-specific DNA binding 1296
              methyl-CpG binding 26
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.