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ONTOLOGY REPORT - ANNOTATIONS


Term:aromatic amino acid family catabolic process
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Accession:GO:0009074 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan).
Synonyms:exact_synonym: aromatic amino acid family breakdown;   aromatic amino acid family catabolism;   aromatic amino acid family degradation


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histidine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Amdhd1 amidohydrolase domain containing 1 JBrowse link 7 34,362,635 34,406,282 RGD:13792537
G Hal histidine ammonia lyase JBrowse link 7 34,326,087 34,356,413 RGD:1624291
RGD:13792537
G Hdc histidine decarboxylase JBrowse link 3 119,057,524 119,075,599 RGD:1624291
RGD:1600115
G Uroc1 urocanate hydratase 1 JBrowse link 4 122,244,744 122,276,357 RGD:1624291
RGD:13792537
histidine catabolic process to glutamate and formamide term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Amdhd1 amidohydrolase domain containing 1 JBrowse link 7 34,362,635 34,406,282 RGD:1600115
G Ftcd formimidoyltransferase cyclodeaminase JBrowse link 20 12,806,957 12,820,466 RGD:1600115
G Hal histidine ammonia lyase JBrowse link 7 34,326,087 34,356,413 RGD:1600115
histidine catabolic process to glutamate and formate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ftcd formimidoyltransferase cyclodeaminase JBrowse link 20 12,806,957 12,820,466 RGD:1600115
G Hal histidine ammonia lyase JBrowse link 7 34,326,087 34,356,413 RGD:1600115
L-phenylalanine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fah fumarylacetoacetate hydrolase JBrowse link 1 146,713,663 146,736,339 RGD:1600115
RGD:13792537
G Gstz1 glutathione S-transferase zeta 1 JBrowse link 6 111,176,798 111,187,246 RGD:1600115
RGD:13792537
G Hgd homogentisate 1, 2-dioxygenase JBrowse link 11 65,983,221 66,034,555 RGD:13792537
G Hpd 4-hydroxyphenylpyruvate dioxygenase JBrowse link 12 38,828,606 38,839,956 RGD:1600115
G Pah phenylalanine hydroxylase JBrowse link 7 28,066,639 28,129,772 RGD:1600115
G Qdpr quinoid dihydropteridine reductase JBrowse link 14 70,164,682 70,178,284 RGD:5128604
RGD:13792537
G Tat tyrosine aminotransferase JBrowse link 19 41,675,639 41,686,195 RGD:1600115
tryptophan catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acmsd aminocarboxymuconate semialdehyde decarboxylase JBrowse link 13 44,424,689 44,468,734 RGD:70243
G Haao 3-hydroxyanthranilate 3,4-dioxygenase JBrowse link 6 7,045,145 7,059,227 RGD:1600115
G Kmo kynurenine 3-monooxygenase JBrowse link 13 93,684,324 93,715,378 RGD:1600115
G Kynu kynureninase JBrowse link 3 28,416,926 28,566,939 RGD:1624291
tryptophan catabolic process to acetyl-CoA term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Kynu kynureninase JBrowse link 3 28,416,926 28,566,939 RGD:2303721
G Tdo2 tryptophan 2,3-dioxygenase JBrowse link 2 180,897,059 180,914,919 RGD:2303721
RGD:13792537
tryptophan catabolic process to kynurenine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Afmid arylformamidase JBrowse link 10 106,828,963 106,844,314 RGD:1624291
RGD:13792537
RGD:1600115
G Ido1 indoleamine 2,3-dioxygenase 1 JBrowse link 16 72,216,326 72,228,098 RGD:2290190
RGD:13792537
RGD:1624291
RGD:1600115
RGD:2290543
G Ido2 indoleamine 2,3-dioxygenase 2 JBrowse link 16 72,232,852 72,291,227 RGD:1600115
RGD:13792537
RGD:1624291
G Kynu kynureninase JBrowse link 3 28,416,926 28,566,939 RGD:13792537
G Tdo2 tryptophan 2,3-dioxygenase JBrowse link 2 180,897,059 180,914,919 RGD:1600115
RGD:1624291
tyrosine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fah fumarylacetoacetate hydrolase JBrowse link 1 146,713,663 146,736,339 RGD:13792537
RGD:1600115
G Gstz1 glutathione S-transferase zeta 1 JBrowse link 6 111,176,798 111,187,246 RGD:1600115
G Hpd 4-hydroxyphenylpyruvate dioxygenase JBrowse link 12 38,828,606 38,839,956 RGD:632936
RGD:13792537
RGD:8554707
G Tat tyrosine aminotransferase JBrowse link 19 41,675,639 41,686,195 RGD:1624291
RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19439
    metabolic process 11638
      catabolic process 2456
        organic substance catabolic process 2017
          organic cyclic compound catabolic process 463
            aromatic amino acid family catabolic process 20
              L-phenylalanine catabolic process + 7
              anthranilate catabolic process 0
              aromatic amino acid family catabolic process to alcohol via Ehrlich pathway 0
              aromatic amino acid family catabolic process to carboxylic acid via Ehrlich pathway 0
              histidine catabolic process + 5
              tryptophan catabolic process + 8
              tyrosine catabolic process + 4
Path 2
Term Annotations click to browse term
  biological_process 19439
    metabolic process 11638
      cellular metabolic process 10639
        organic acid metabolic process 1043
          oxoacid metabolic process 1016
            carboxylic acid metabolic process 972
              cellular amino acid metabolic process 267
                cellular amino acid catabolic process 104
                  aromatic amino acid family catabolic process 20
                    L-phenylalanine catabolic process + 7
                    anthranilate catabolic process 0
                    aromatic amino acid family catabolic process to alcohol via Ehrlich pathway 0
                    aromatic amino acid family catabolic process to carboxylic acid via Ehrlich pathway 0
                    histidine catabolic process + 5
                    tryptophan catabolic process + 8
                    tyrosine catabolic process + 4
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.