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ONTOLOGY REPORT - ANNOTATIONS


Term:aromatic amino acid family catabolic process
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Accession:GO:0009074 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan).
Synonyms:exact_synonym: aromatic amino acid family breakdown;   aromatic amino acid family catabolism;   aromatic amino acid family degradation


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histidine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Amdhd1 amidohydrolase domain containing 1 JBrowse link NW_004955405 32,281,726 32,308,230 RGD:9068941
G Carns1 carnosine synthase 1 JBrowse link NW_004955422 18,051,721 18,061,500 RGD:9068941
G Ftcd formimidoyltransferase cyclodeaminase JBrowse link NW_004955407 42,608,249 42,617,167 RGD:9068941
G Hal histidine ammonia-lyase JBrowse link NW_004955405 32,317,345 32,341,409 RGD:9068941
G Hdc histidine decarboxylase JBrowse link NW_004955409 4,051,574 4,072,641 RGD:9068941
G Hnmt histamine N-methyltransferase JBrowse link NW_004955440 5,084,198 5,137,577 RGD:9068941
G Uroc1 urocanate hydratase 1 JBrowse link NW_004955421 21,734,910 21,765,754 RGD:9068941
histidine catabolic process to glutamate and formamide term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Amdhd1 amidohydrolase domain containing 1 JBrowse link NW_004955405 32,281,726 32,308,230 RGD:9068941
G Ftcd formimidoyltransferase cyclodeaminase JBrowse link NW_004955407 42,608,249 42,617,167 RGD:9068941
G Hal histidine ammonia-lyase JBrowse link NW_004955405 32,317,345 32,341,409 RGD:9068941
G Uroc1 urocanate hydratase 1 JBrowse link NW_004955421 21,734,910 21,765,754 RGD:9068941
histidine catabolic process to glutamate and formate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Amdhd1 amidohydrolase domain containing 1 JBrowse link NW_004955405 32,281,726 32,308,230 RGD:9068941
G Ftcd formimidoyltransferase cyclodeaminase JBrowse link NW_004955407 42,608,249 42,617,167 RGD:9068941
G Hal histidine ammonia-lyase JBrowse link NW_004955405 32,317,345 32,341,409 RGD:9068941
G Uroc1 urocanate hydratase 1 JBrowse link NW_004955421 21,734,910 21,765,754 RGD:9068941
L-phenylalanine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fah fumarylacetoacetate hydrolase JBrowse link NW_004955533 904,294 921,730 RGD:9068941
G Gstz1 glutathione S-transferase zeta 1 JBrowse link NW_004955438 1,218,990 1,231,407 RGD:9068941
G Hgd homogentisate 1,2-dioxygenase JBrowse link NW_004955427 20,141,522 20,188,700 RGD:9068941
G Hpd 4-hydroxyphenylpyruvate dioxygenase JBrowse link NW_004955482 6,586,975 6,595,034 RGD:9068941
G Il4i1 interleukin 4 induced 1 JBrowse link NW_004955559 1,012,634 1,047,051 RGD:9068941
G Kyat1 kynurenine aminotransferase 1 JBrowse link NW_004955570 1,211,950 1,260,561 RGD:9068941
G Pah phenylalanine hydroxylase JBrowse link NW_004955405 37,848,486 37,909,163 RGD:9068941
G Pcbd1 pterin-4 alpha-carbinolamine dehydratase 1 JBrowse link NW_004955437 20,482,589 20,487,337 RGD:9068941
G Qdpr quinoid dihydropteridine reductase JBrowse link NW_004955480 6,646,088 6,666,866 RGD:9068941
G Tat tyrosine aminotransferase JBrowse link NW_004955484 4,278,083 4,287,535 RGD:9068941
tryptophan catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acmsd aminocarboxymuconate semialdehyde decarboxylase JBrowse link NW_004955440 2,348,434 2,412,706 RGD:9068941
G Haao 3-hydroxyanthranilate 3,4-dioxygenase JBrowse link NW_004955441 10,114,863 10,128,948 RGD:9068941
G Ido1 indoleamine 2,3-dioxygenase 1 JBrowse link NW_004955536 2,944,770 2,955,829 RGD:9068941
G Ido2 indoleamine 2,3-dioxygenase 2 JBrowse link NW_004955536 2,894,410 2,938,862 RGD:9068941
G Kmo kynurenine 3-monooxygenase JBrowse link NW_004955406 10,496,102 10,527,181 RGD:9068941
G Kyat1 kynurenine aminotransferase 1 JBrowse link NW_004955570 1,211,950 1,260,561 RGD:9068941
G Kynu kynureninase JBrowse link NW_004955440 9,420,141 9,536,767 RGD:9068941
G Tdo2 tryptophan 2,3-dioxygenase JBrowse link NW_004955471 11,229,795 11,245,255 RGD:9068941
tryptophan catabolic process to acetyl-CoA term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Kynu kynureninase JBrowse link NW_004955440 9,420,141 9,536,767 RGD:9068941
G Tdo2 tryptophan 2,3-dioxygenase JBrowse link NW_004955471 11,229,795 11,245,255 RGD:9068941
tryptophan catabolic process to kynurenine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Afmid arylformamidase JBrowse link NW_004955506 4,351,623 4,379,528 RGD:9068941
G Ido1 indoleamine 2,3-dioxygenase 1 JBrowse link NW_004955536 2,944,770 2,955,829 RGD:9068941
G Ido2 indoleamine 2,3-dioxygenase 2 JBrowse link NW_004955536 2,894,410 2,938,862 RGD:9068941
G Kynu kynureninase JBrowse link NW_004955440 9,420,141 9,536,767 RGD:9068941
G Tdo2 tryptophan 2,3-dioxygenase JBrowse link NW_004955471 11,229,795 11,245,255 RGD:9068941
tyrosine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fah fumarylacetoacetate hydrolase JBrowse link NW_004955533 904,294 921,730 RGD:9068941
G Gstz1 glutathione S-transferase zeta 1 JBrowse link NW_004955438 1,218,990 1,231,407 RGD:9068941
G Hgd homogentisate 1,2-dioxygenase JBrowse link NW_004955427 20,141,522 20,188,700 RGD:9068941
G Hpd 4-hydroxyphenylpyruvate dioxygenase JBrowse link NW_004955482 6,586,975 6,595,034 RGD:9068941
G Tat tyrosine aminotransferase JBrowse link NW_004955484 4,278,083 4,287,535 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 14568
    metabolic process 9956
      catabolic process 2479
        organic substance catabolic process 2071
          organic cyclic compound catabolic process 604
            aromatic amino acid family catabolic process 25
              L-phenylalanine catabolic process + 10
              anthranilate catabolic process 0
              aromatic amino acid family catabolic process to alcohol via Ehrlich pathway 0
              aromatic amino acid family catabolic process to carboxylic acid via Ehrlich pathway 0
              histidine catabolic process + 7
              tryptophan catabolic process + 9
              tyrosine catabolic process + 5
Path 2
Term Annotations click to browse term
  biological_process 14568
    metabolic process 9956
      cellular metabolic process 9380
        organic acid metabolic process 1041
          oxoacid metabolic process 1023
            carboxylic acid metabolic process 945
              cellular amino acid metabolic process 326
                cellular amino acid catabolic process 119
                  aromatic amino acid family catabolic process 25
                    L-phenylalanine catabolic process + 10
                    anthranilate catabolic process 0
                    aromatic amino acid family catabolic process to alcohol via Ehrlich pathway 0
                    aromatic amino acid family catabolic process to carboxylic acid via Ehrlich pathway 0
                    histidine catabolic process + 7
                    tryptophan catabolic process + 9
                    tyrosine catabolic process + 5
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.