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ONTOLOGY REPORT - ANNOTATIONS


Term:aromatic amino acid family catabolic process
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Accession:GO:0009074 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan).
Synonyms:exact_synonym: aromatic amino acid family breakdown;   aromatic amino acid family catabolism;   aromatic amino acid family degradation


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histidine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AMDHD1 amidohydrolase domain containing 1 JBrowse link 5 87,551,887 87,569,271 RGD:14298760
G FTCD formimidoyltransferase cyclodeaminase RGD:14298760
G HAL histidine ammonia-lyase JBrowse link 5 87,522,483 87,547,489 RGD:14298760
G HDC histidine decarboxylase JBrowse link 1 121,505,677 121,525,416 RGD:14298760
G UROC1 urocanate hydratase 1 JBrowse link 7 53,592,763 53,634,214 RGD:14298760
histidine catabolic process to glutamate and formamide term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AMDHD1 amidohydrolase domain containing 1 JBrowse link 5 87,551,887 87,569,271 RGD:14298760
G FTCD formimidoyltransferase cyclodeaminase RGD:14298760
G HAL histidine ammonia-lyase JBrowse link 5 87,522,483 87,547,489 RGD:14298760
histidine catabolic process to glutamate and formate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FTCD formimidoyltransferase cyclodeaminase RGD:14298760
G HAL histidine ammonia-lyase JBrowse link 5 87,522,483 87,547,489 RGD:14298760
L-phenylalanine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FAH fumarylacetoacetate hydrolase JBrowse link 7 49,047,833 49,087,790 RGD:14298760
G GSTZ1 glutathione S-transferase zeta 1 JBrowse link 7 100,392,217 100,404,025 RGD:14298760
G HGD homogentisate 1,2-dioxygenase JBrowse link 13 139,660,315 139,710,402 RGD:14298760
G HPD 4-hydroxyphenylpyruvate dioxygenase JBrowse link 14 30,845,608 30,857,658 RGD:14298760
G PAH phenylalanine hydroxylase JBrowse link 5 81,385,401 81,460,569 RGD:14298760
G QDPR quinoid dihydropteridine reductase JBrowse link 8 12,529,500 12,549,471 RGD:14298760
G TAT tyrosine aminotransferase JBrowse link 6 14,571,311 14,583,203 RGD:14298760
tryptophan catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G HAAO 3-hydroxyanthranilate 3,4-dioxygenase JBrowse link 3 97,580,756 97,595,033 RGD:14298760
G KMO kynurenine 3-monooxygenase JBrowse link 10 12,442,877 12,489,417 RGD:14298760
G KYNU kynureninase JBrowse link 15 8,847,335 8,982,951 RGD:14298760
tryptophan catabolic process to acetyl-CoA term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TDO2 tryptophan 2,3-dioxygenase JBrowse link 8 44,708,722 44,725,954 RGD:14298760
tryptophan catabolic process to kynurenine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AFMID arylformamidase JBrowse link 12 3,759,688 3,785,829 RGD:14298760
G IDO1 indoleamine 2,3-dioxygenase 1 JBrowse link 17 9,245,283 9,260,140 RGD:14298760
G IDO2 indoleamine 2,3-dioxygenase 2 JBrowse link 17 9,277,039 9,344,405 RGD:14298760
G KYNU kynureninase JBrowse link 15 8,847,335 8,982,951 RGD:14298760
G TDO2 tryptophan 2,3-dioxygenase JBrowse link 8 44,708,722 44,725,954 RGD:14298760
tyrosine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FAH fumarylacetoacetate hydrolase JBrowse link 7 49,047,833 49,087,790 RGD:14298760
G HPD 4-hydroxyphenylpyruvate dioxygenase JBrowse link 14 30,845,608 30,857,658 RGD:14298760
G TAT tyrosine aminotransferase JBrowse link 6 14,571,311 14,583,203 RGD:14298760

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 14973
    metabolic process 9067
      catabolic process 1763
        organic substance catabolic process 1488
          organic cyclic compound catabolic process 338
            aromatic amino acid family catabolic process 19
              L-phenylalanine catabolic process + 7
              anthranilate catabolic process 0
              aromatic amino acid family catabolic process to alcohol via Ehrlich pathway 0
              aromatic amino acid family catabolic process to carboxylic acid via Ehrlich pathway 0
              histidine catabolic process + 5
              tryptophan catabolic process + 7
              tyrosine catabolic process + 3
Path 2
Term Annotations click to browse term
  biological_process 14973
    metabolic process 9067
      cellular metabolic process 8274
        organic acid metabolic process 702
          oxoacid metabolic process 685
            carboxylic acid metabolic process 652
              cellular amino acid metabolic process 217
                cellular amino acid catabolic process 79
                  aromatic amino acid family catabolic process 19
                    L-phenylalanine catabolic process + 7
                    anthranilate catabolic process 0
                    aromatic amino acid family catabolic process to alcohol via Ehrlich pathway 0
                    aromatic amino acid family catabolic process to carboxylic acid via Ehrlich pathway 0
                    histidine catabolic process + 5
                    tryptophan catabolic process + 7
                    tyrosine catabolic process + 3
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.