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ONTOLOGY REPORT - ANNOTATIONS


Term:glutamine family amino acid biosynthetic process
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Accession:GO:0009084 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of amino acids of the glutamine family, comprising arginine, glutamate, glutamine and proline.
Synonyms:exact_synonym: glutamine family amino acid anabolism;   glutamine family amino acid biosynthesis;   glutamine family amino acid formation;   glutamine family amino acid synthesis


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arginine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Asl argininosuccinate lyase JBrowse link 12 30,160,922 30,178,348 RGD:632221
G Ass1 argininosuccinate synthase 1 JBrowse link 3 10,327,411 10,375,847 RGD:631755
RGD:13792537
RGD:1624291
RGD:12859071
RGD:1600115
G Nags N-acetylglutamate synthase JBrowse link 10 90,084,607 90,089,693 RGD:13792537
arginine biosynthetic process via ornithine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Asl argininosuccinate lyase JBrowse link 12 30,160,922 30,178,348 RGD:1600115
RGD:13792537
G Otc ornithine carbamoyltransferase JBrowse link X 13,524,804 13,601,074 RGD:13792537
glutamate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gls glutaminase JBrowse link 9 54,212,622 54,284,879 RGD:1600115
RGD:13792537
RGD:1624291
G Gls2 glutaminase 2 JBrowse link 7 2,605,679 2,621,853 RGD:13792537
G Glud1 glutamate dehydrogenase 1 JBrowse link 16 10,661,486 10,695,557 RGD:1624291
G Slc25a12 solute carrier family 25 member 12 JBrowse link 3 57,881,951 57,998,214 RGD:13628741
glutamine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Glul glutamate-ammonia ligase JBrowse link 13 71,331,052 71,340,207 RGD:2301548
RGD:13792537
RGD:2301547
G Lgsn lengsin, lens protein with glutamine synthetase domain JBrowse link 9 37,458,603 37,490,117 RGD:13792537
L-proline biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aldh18a1 aldehyde dehydrogenase 18 family, member A1 JBrowse link 1 259,641,673 259,674,521 RGD:1600115
G LOC108348083 delta-1-pyrroline-5-carboxylate synthase JBrowse link 1 259,057,407 259,089,727 RGD:1600115
G Noxred1 NADP-dependent oxidoreductase domain containing 1 JBrowse link 6 111,243,232 111,271,107 RGD:13792537
G Oat ornithine aminotransferase JBrowse link 1 204,562,289 204,582,070 RGD:1600115
G Pycr1 pyrroline-5-carboxylate reductase 1 JBrowse link 10 109,817,300 109,822,218 RGD:1600115
RGD:13792537
G Pycr2 pyrroline-5-carboxylate reductase 2 JBrowse link 13 99,184,624 99,188,418 RGD:1600115
RGD:13792537
G Pycr3 pyrroline-5-carboxylate reductase 3 JBrowse link 7 116,949,882 116,955,150 RGD:1600115
RGD:13792537
RGD:1624291
proline biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aldh18a1 aldehyde dehydrogenase 18 family, member A1 JBrowse link 1 259,641,673 259,674,521 RGD:1624291
G Pycr1 pyrroline-5-carboxylate reductase 1 JBrowse link 10 109,817,300 109,822,218 RGD:1624291
G Pycr2 pyrroline-5-carboxylate reductase 2 JBrowse link 13 99,184,624 99,188,418 RGD:1624291
RGD:1600115
regulation of arginine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin JBrowse link 1 197,986,384 197,999,726 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19676
    metabolic process 11952
      primary metabolic process 10613
        cellular amino acid metabolic process 272
          cellular amino acid biosynthetic process 70
            alpha-amino acid biosynthetic process 65
              glutamine family amino acid biosynthetic process 18
                arginine biosynthetic process + 5
                glutamate biosynthetic process + 4
                glutamine biosynthetic process + 2
                proline biosynthetic process + 7
Path 2
Term Annotations click to browse term
  biological_process 19676
    metabolic process 11952
      cellular metabolic process 10780
        organic acid metabolic process 1067
          oxoacid metabolic process 1040
            carboxylic acid metabolic process 992
              carboxylic acid biosynthetic process 312
                cellular amino acid biosynthetic process 70
                  alpha-amino acid biosynthetic process 65
                    glutamine family amino acid biosynthetic process 18
                      arginine biosynthetic process + 5
                      glutamate biosynthetic process + 4
                      glutamine biosynthetic process + 2
                      proline biosynthetic process + 7
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.