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ONTOLOGY REPORT - ANNOTATIONS


Term:glycoprotein metabolic process
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Accession:GO:0009100 term browser browse the term
Definition:The chemical reactions and pathways involving glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide.
Synonyms:exact_synonym: glycoprotein metabolism


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glycoprotein metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end product-specific receptor IEP glycosylated bovine serum albumin RGD PMID:23348924 RGD:7244269 NCBI chr20:4,363,152...4,366,079
Ensembl chr20:4,363,152...4,366,079
JBrowse link
G Asgr2 asialoglycoprotein receptor 2 ISO MGI:88082 (MGI:69369|PMID:7961705) RGD PMID:7961705 MGI:69369 NCBI chr10:56,710,446...56,723,608
Ensembl chr10:56,710,464...56,723,611
JBrowse link
G Erp44 endoplasmic reticulum protein 44 ISO (PMID:11847130) RGD PMID:11847130 NCBI chr 5:63,937,866...64,030,827
Ensembl chr 5:63,937,784...64,030,901
JBrowse link
G Man1a2 mannosidase, alpha, class 1A, member 2 ISO MGI:3703789 (MGI:3703634|PMID:17121831) RGD PMID:17121831 MGI:3703634 NCBI chr 2:202,891,537...203,043,847
Ensembl chr 2:202,891,537...203,043,847
JBrowse link
G Oga O-GlcNAcase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:265,506,752...265,542,452
Ensembl chr 1:265,507,451...265,542,276
JBrowse link
G Pcsk6 proprotein convertase subtilisin/kexin type 6 ISO
IEA
(PMID:8218226)
GO_REF:0000107
RGD
Ensembl
PMID:8218226 GO_REF:0000107 NCBI chr 1:126,749,508...126,947,392
Ensembl chr 1:126,749,508...126,947,392
JBrowse link
G Porcn porcupine O-acyltransferase ISO (MGI:1860653|PMID:10866835) RGD PMID:10866835 MGI:1860653 NCBI chr  X:15,035,569...15,048,440
Ensembl chr  X:15,035,569...15,048,440
JBrowse link
G Slc34a1 solute carrier family 34 member 1 IEP matrix extracellular phosphoglycoprotein RGD PMID:19005008 RGD:7243132 NCBI chr17:9,747,766...9,762,739
Ensembl chr17:9,747,752...9,762,813
JBrowse link
G St6galnac3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 ISO (PMID:17123352) RGD PMID:17123352 NCBI chr 2:259,379,653...259,918,813
Ensembl chr 2:259,379,509...259,898,525
JBrowse link
G St6galnac6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 ISO (PMID:17123352) RGD PMID:17123352 NCBI chr 3:11,620,050...11,641,460
Ensembl chr 3:11,629,556...11,641,466
JBrowse link
G St8sia3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 ISO (PMID:10766765), (PMID:9826427) RGD PMID:9826427, PMID:10766765 NCBI chr18:59,748,766...59,755,257
Ensembl chr18:59,748,444...59,755,226
JBrowse link
G St8sia6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 ISO (MGI:2182536|PMID:11980897) RGD PMID:11980897 MGI:2182536 NCBI chr17:80,960,785...81,002,830
Ensembl chr17:80,960,785...81,002,838
JBrowse link
CD80 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tmem106a transmembrane protein 106A ISS
ISO
GO_REF:0000024
(MGI:6216178|PMID:26215746)
UniProt
RGD
PMID:26215746 GO_REF:0000024, MGI:6216178 NCBI chr10:89,484,269...89,493,288
Ensembl chr10:89,484,468...89,493,283
JBrowse link
CD86 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tmem106a transmembrane protein 106A ISS
ISO
GO_REF:0000024
(MGI:6216178|PMID:26215746)
UniProt
RGD
PMID:26215746 GO_REF:0000024, MGI:6216178 NCBI chr10:89,484,269...89,493,288
Ensembl chr10:89,484,468...89,493,283
JBrowse link
G Trex1 three prime repair exonuclease 1 ISO MGI:3052754 (MGI:5554502|PMID:24218451) RGD PMID:24218451 MGI:5554502 NCBI chr 8:117,796,127...117,797,427
Ensembl chr 8:117,796,128...117,797,427
JBrowse link
chondroitin sulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07032202.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr18:54,206,651...54,207,523 JBrowse link
G Chpf chondroitin polymerizing factor IBA
ISO
PMID:21873635
MGI:2681120|MGI:5464019 (MGI:5462280|PMID:22952873), (MGI:5462286|PMID:22952769)
(PMID:12761225)
RGD PMID:12761225, PMID:22952769, PMID:22952873, PMID:21873635 MGI:5462280, MGI:5462286, RGD:13792537 NCBI chr 9:82,669,199...82,673,898
Ensembl chr 9:82,669,204...82,673,898
JBrowse link
G Chpf2 chondroitin polymerizing factor 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:7,108,461...7,113,940
Ensembl chr 4:7,108,462...7,113,919
JBrowse link
G Chst11 carbohydrate sulfotransferase 11 ISO (PMID:11056388)
MGI:1926002 (MGI:1354846|PMID:10722746), (MGI:4941099|PMID:21138417)
RGD PMID:10722746, PMID:11056388, PMID:21138417 MGI:1354846, MGI:4941099 NCBI chr 7:26,641,856...26,890,503
Ensembl chr 7:26,645,422...26,859,716
JBrowse link
G Chst12 carbohydrate sulfotransferase 12 ISO (PMID:10781601) RGD PMID:10781601 NCBI chr12:16,199,975...16,218,404
Ensembl chr12:16,200,019...16,201,632
JBrowse link
G Chst13 carbohydrate sulfotransferase 13 ISO (PMID:12080076) RGD PMID:12080076 NCBI chr 4:122,223,846...122,244,848
Ensembl chr 4:122,224,535...122,237,754
JBrowse link
G Chst3 carbohydrate sulfotransferase 3 IEA
ISO
IBA
GO_REF:0000107
MGI:2176247 (MGI:1206144|PMID:9597547), (MGI:2156294|PMID:11696535)
PMID:21873635
(PMID:9883891)
Ensembl
RGD
PMID:9597547, PMID:9883891, PMID:11696535, PMID:21873635 GO_REF:0000107, MGI:1206144, MGI:2156294, RGD:13792537 NCBI chr20:29,731,828...29,768,656
Ensembl chr20:29,731,816...29,738,506
JBrowse link
G Chst7 carbohydrate sulfotransferase 7 ISO
IBA
(PMID:10781596)
PMID:21873635
RGD PMID:10781596, PMID:21873635 RGD:13792537 NCBI chr  X:2,623,018...2,657,155
Ensembl chr  X:2,623,024...2,657,155
JBrowse link
G Chsy1 chondroitin sulfate synthase 1 ISO
IBA
(PMID:11514575)
MGI:106576 (MGI:5462286|PMID:22952769)
PMID:21873635
RGD PMID:11514575, PMID:22952769, PMID:21873635 MGI:5462286, RGD:13792537 NCBI chr 1:127,010,587...127,071,570
Ensembl chr 1:127,010,588...127,071,570
JBrowse link
G Chsy3 chondroitin sulfate synthase 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:54,243,626...54,497,475
Ensembl chr18:54,243,949...54,496,585
JBrowse link
G Csgalnact1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 ISO
IBA
(PMID:11514575), (PMID:12163485)
PMID:21873635
RGD PMID:11514575, PMID:12163485, PMID:21873635 RGD:13792537 NCBI chr16:22,704,318...23,075,071
Ensembl chr16:22,979,444...23,074,798
JBrowse link
G Csgalnact2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:150,148,626...150,185,062
Ensembl chr 4:150,153,844...150,185,044
JBrowse link
G Slc35d1 solute carrier family 35 member D1 ISO MGI:3774133 (MGI:3771453|PMID:17952091) RGD PMID:17952091 MGI:3771453 NCBI chr 5:122,700,396...122,746,815
Ensembl chr 5:122,699,587...122,746,839
JBrowse link
G Ugdh UDP-glucose 6-dehydrogenase ISS
ISO
IEA
GO_REF:0000024
(MGI:2675908|PMID:14505572)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:14505572 GO_REF:0000024, GO_REF:0000107, MGI:2675908 NCBI chr14:44,479,614...44,502,845
Ensembl chr14:44,479,614...44,502,845
JBrowse link
G Xylt1 xylosyltransferase 1 IEA
ISO
GO_REF:0000041
(MGI:5544658|PMID:24161523)
UniProt
RGD
PMID:24161523 GO_REF:0000041, MGI:5544658 NCBI chr 1:186,939,698...187,264,758
Ensembl chr 1:187,149,453...187,261,632
JBrowse link
G Xylt2 xylosyltransferase 2 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr10:82,386,003...82,399,485
Ensembl chr10:82,386,005...82,399,485
JBrowse link
chondroitin sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hyal4 hyaluronidase 4 ISO (MGI:5490850|PMID:23086929) RGD PMID:23086929 MGI:5490850 NCBI chr 4:52,147,641...52,166,276
Ensembl chr 4:52,147,641...52,167,122
JBrowse link
chondroitin sulfate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bpnt2 3'(2'), 5'-bisphosphate nucleotidase 2 ISO MGI:3806990|MGI:3810994 (MGI:3799383|PMID:18539921), (MGI:3809386|PMID:18695242) RGD PMID:18539921, PMID:18695242 MGI:3799383, MGI:3809386 NCBI chr17:90,191,119...90,218,013
Ensembl chr17:90,188,043...90,218,013
Ensembl chr 5:90,188,043...90,218,013
JBrowse link
G Chst11 carbohydrate sulfotransferase 11 ISO MGI:3768254 (MGI:3767479|PMID:16079159) RGD PMID:16079159 MGI:3767479 NCBI chr 7:26,641,856...26,890,503
Ensembl chr 7:26,645,422...26,859,716
JBrowse link
G Csgalnact1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 ISO MGI:4868209|MGI:4947395 (MGI:4849906|PMID:20812917), (MGI:4946456|PMID:21148564) RGD PMID:20812917, PMID:21148564 MGI:4849906, MGI:4946456 NCBI chr16:22,704,318...23,075,071
Ensembl chr16:22,979,444...23,074,798
JBrowse link
G Dse dermatan sulfate epimerase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:27,703,738...27,784,982
Ensembl chr20:27,703,732...27,782,586
JBrowse link
G Dsel dermatan sulfate epimerase-like IBA
ISO
PMID:21873635
MGI:5583872 (MGI:5583874|PMID:22496542)
RGD PMID:22496542, PMID:21873635 MGI:5583874, RGD:13792537 NCBI chr13:1,942,384...1,948,563
Ensembl chr13:1,942,499...1,946,508
JBrowse link
chondroitin sulfate proteoglycan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3gat1 beta-1,3-glucuronyltransferase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:27,777,024...27,804,368
Ensembl chr 8:27,777,179...27,804,515
JBrowse link
G B3gat2 beta-1,3-glucuronyltransferase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:29,984,077...30,068,649
Ensembl chr 9:29,984,077...30,068,649
JBrowse link
G B3gat3 beta-1,3-glucuronyltransferase 3 ISO
IBA
(PMID:21763480), (PMID:25893793)
PMID:21873635
RGD PMID:21763480, PMID:25893793, PMID:21873635 RGD:13792537 NCBI chr 1:225,120,061...225,126,579
Ensembl chr 1:225,120,061...225,126,579
JBrowse link
G Csgalnact2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 ISO (PMID:11788602)
MGI:1927166 (MGI:4941099|PMID:21138417)
RGD PMID:11788602, PMID:21138417 MGI:4941099 NCBI chr 4:150,148,626...150,185,062
Ensembl chr 4:150,153,844...150,185,044
JBrowse link
G Cytl1 cytokine like 1 ISO (MGI:3758399|PMID:17644814) RGD PMID:17644814 MGI:3758399 NCBI chr14:77,805,137...77,810,147
Ensembl chr14:77,805,130...77,810,147
JBrowse link
G Igf1 insulin-like growth factor 1 ISO (MGI:3758399|PMID:17644814) RGD PMID:17644814 MGI:3758399 NCBI chr 7:28,412,123...28,491,815
Ensembl chr 7:28,412,198...28,486,609
JBrowse link
G Pxylp1 2-phosphoxylose phosphatase 1 ISO
IBA
ISS
(PMID:24425863)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:24425863, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 8:104,724,728...104,790,639
Ensembl chr 8:104,724,743...104,790,639
JBrowse link
G Xylt1 xylosyltransferase 1 ISS
IBA
ISO
IEA
GO_REF:0000024
PMID:21873635
(PMID:17189265)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:17189265, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr 1:186,939,698...187,264,758
Ensembl chr 1:187,149,453...187,261,632
JBrowse link
G Xylt2 xylosyltransferase 2 IEA
IBA
ISO
ISS
GO_REF:0000107
PMID:21873635
(PMID:17189265), (PMID:26027496)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:17189265, PMID:26027496, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr10:82,386,003...82,399,485
Ensembl chr10:82,386,005...82,399,485
JBrowse link
chondroitin sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csgalnact1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 ISO (PMID:12163485) RGD PMID:12163485 NCBI chr16:22,704,318...23,075,071
Ensembl chr16:22,979,444...23,074,798
JBrowse link
dermatan sulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chst12 carbohydrate sulfotransferase 12 ISO (PMID:10781601) RGD PMID:10781601 NCBI chr12:16,199,975...16,218,404
Ensembl chr12:16,200,019...16,201,632
JBrowse link
G Chst14 carbohydrate sulfotransferase 14 ISO (PMID:11470797) RGD PMID:11470797 NCBI chr 3:110,734,105...110,736,162
Ensembl chr 3:110,734,105...110,736,162
JBrowse link
G Dse dermatan sulfate epimerase ISO (PMID:16505484) RGD PMID:16505484 NCBI chr20:27,703,738...27,784,982
Ensembl chr20:27,703,732...27,782,586
JBrowse link
dermatan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Idua alpha-L-iduronidase ISO (PMID:24036510)
MGI:2176236|MGI:4415188 (MGI:4397742|PMID:19834056), (MGI:4414887|PMID:19751987)
RGD PMID:19751987, PMID:19834056, PMID:24036510 MGI:4397742, MGI:4414887 NCBI chr14:2,041,828...2,056,762
Ensembl chr14:2,042,411...2,056,762
JBrowse link
dermatan sulfate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dse dermatan sulfate epimerase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:27,703,738...27,784,982
Ensembl chr20:27,703,732...27,782,586
JBrowse link
G Dsel dermatan sulfate epimerase-like IBA
ISO
PMID:21873635
MGI:5583872 (MGI:5583874|PMID:22496542)
RGD PMID:22496542, PMID:21873635 MGI:5583874, RGD:13792537 NCBI chr13:1,942,384...1,948,563
Ensembl chr13:1,942,499...1,946,508
JBrowse link
dermatan sulfate proteoglycan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3gat3 beta-1,3-glucuronyltransferase 3 ISO (PMID:21763480), (PMID:25893793) RGD PMID:21763480, PMID:25893793 NCBI chr 1:225,120,061...225,126,579
Ensembl chr 1:225,120,061...225,126,579
JBrowse link
G Csgalnact2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 ISO (PMID:11788602) RGD PMID:11788602 NCBI chr 4:150,148,626...150,185,062
Ensembl chr 4:150,153,844...150,185,044
JBrowse link
dermatan sulfate proteoglycan metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chst14 carbohydrate sulfotransferase 14 ISO
IBA
(PMID:11470797)
PMID:21873635
RGD PMID:11470797, PMID:21873635 RGD:13792537 NCBI chr 3:110,734,105...110,736,162
Ensembl chr 3:110,734,105...110,736,162
JBrowse link
dolichol-linked oligosaccharide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alg10 ALG10, alpha-1,2-glucosyltransferase IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:131,330,913...131,336,183
Ensembl chr 7:131,330,913...131,336,183
JBrowse link
G Alg12 ALG12, alpha-1,6-mannosyltransferase ISO (PMID:11983712) RGD PMID:11983712 NCBI chr 7:129,798,663...129,812,677
Ensembl chr 7:129,798,663...129,812,388
JBrowse link
G Alg13 ALG13, UDP-N-acetylglucosaminyltransferase subunit IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:115,561,329...115,589,792
Ensembl chr  X:115,561,332...115,619,505
JBrowse link
G Alg14 ALG14, UDP-N-acetylglucosaminyltransferase subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:224,851,352...224,931,461
Ensembl chr 2:224,851,383...224,931,459
JBrowse link
G Alg2 ALG2, alpha-1,3/1,6-mannosyltransferase ISO UniProtKB:P43636 (PMID:12684507) RGD PMID:12684507 NCBI chr 5:63,187,466...63,192,025
Ensembl chr 5:63,187,468...63,192,025
JBrowse link
G Alg6 ALG6, alpha-1,3-glucosyltransferase IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:118,415,680...118,470,634
Ensembl chr 5:118,418,799...118,469,376
JBrowse link
G Dpagt1 dolichyl-phosphate N-acetylglucosaminephosphotransferase 1 IDA
ISO
(PMID:29459785) RGD PMID:29459785, PMID:8280061 RGD:1624315 NCBI chr 8:48,657,779...48,664,531
Ensembl chr 8:48,657,795...48,664,860
JBrowse link
G LOC108349244 putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:115,582,591...115,619,339 JBrowse link
G Mpdu1 mannose-P-dolichol utilization defect 1 IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr10:56,261,636...56,267,213
Ensembl chr10:56,261,637...56,267,213
JBrowse link
G Rft1 RFT1 homolog IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr16:6,712,387...6,746,711
Ensembl chr16:6,712,389...6,746,696
JBrowse link
G Srd5a3 steroid 5 alpha-reductase 3 ISO
IEA
IBA
ISS
(PMID:20637498)
(MGI:4821529|PMID:20637498)
GO_REF:0000104
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:20637498, PMID:21873635 GO_REF:0000024, GO_REF:0000104, MGI:4821529, RGD:13792537 NCBI chr14:34,554,769...34,570,423
Ensembl chr14:34,556,220...34,570,356
JBrowse link
dolichyl diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhdds dehydrodolichyl diphosphate synthase subunit ISO (PMID:28842490) RGD PMID:28842490 NCBI chr 5:152,200,681...152,227,669
Ensembl chr 5:152,199,584...152,227,677
JBrowse link
G Dpagt1 dolichyl-phosphate N-acetylglucosaminephosphotransferase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:48,657,779...48,664,531
Ensembl chr 8:48,657,795...48,664,860
JBrowse link
G Nus1 NUS1 dehydrodolichyl diphosphate synthase subunit ISO (PMID:28842490) RGD PMID:28842490 NCBI chr20:33,557,052...33,584,011
Ensembl chr20:33,557,052...33,584,010
JBrowse link
elastin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha ISO MGI:1856101 (MGI:83737|PMID:8096378) RGD PMID:8096378 MGI:83737 NCBI chr  X:77,076,085...77,193,644
Ensembl chr  X:77,076,106...77,193,644
JBrowse link
elastin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cela1 chymotrypsin like elastase 1 IEA
ISO
GO_REF:0000107
(MGI:5641427|PMID:24793170)
Ensembl
RGD
PMID:24793170 GO_REF:0000107, MGI:5641427 NCBI chr 7:142,305,337...142,318,621
Ensembl chr 7:142,305,338...142,318,620
JBrowse link
G Ctsl cathepsin L ISS
ISO
GO_REF:0000024
(MGI:6259330|PMID:12417635)
UniProt
RGD
PMID:12417635 GO_REF:0000024, MGI:6259330 NCBI chr17:1,873,105...1,879,266
Ensembl chr17:1,872,848...1,879,279
JBrowse link
G Mmp12 matrix metallopeptidase 12 IEA
ISO
GO_REF:0000107
(PMID:29101312)
Ensembl
RGD
PMID:29101312 GO_REF:0000107 NCBI chr 8:5,594,717...5,616,494
Ensembl chr 8:5,606,592...5,616,493
JBrowse link
elastin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hif1a hypoxia inducible factor 1 subunit alpha IEA
ISO
GO_REF:0000107
(MGI:3772289|PMID:18037992)
Ensembl
RGD
PMID:18037992 GO_REF:0000107, MGI:3772289 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052
JBrowse link
G Lep leptin ISO MGI:1856424 (MGI:5616293|PMID:23413430) RGD PMID:23413430 MGI:5616293 NCBI chr 4:56,337,695...56,351,818
Ensembl chr 4:56,337,695...56,351,818
JBrowse link
endoplasmic reticulum mannose trimming term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Man1b1 mannosidase, alpha, class 1B, member 1 ISO (PMID:18003979) RGD PMID:18003979 NCBI chr 3:2,547,259...2,569,051
Ensembl chr 3:2,547,986...2,569,049
JBrowse link
FasL biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phlda1 pleckstrin homology-like domain, family A, member 1 IEA
ISO
GO_REF:0000107
(MGI:1095266|PMID:8673705)
Ensembl
RGD
PMID:8673705 GO_REF:0000107, MGI:1095266 NCBI chr 7:54,247,460...54,249,664
Ensembl chr 7:54,247,460...54,249,664
JBrowse link
glycoprotein biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A4gnt alpha-1,4-N-acetylglucosaminyltransferase ISO (PMID:10430883) RGD PMID:10430883 NCBI chr 8:107,856,853...107,866,438
Ensembl chr 8:107,859,366...107,865,789
JBrowse link
G B4galt1 beta-1,4-galactosyltransferase 1 ISO MGI:2450889 (MGI:1339510|PMID:10381349), (MGI:2148393|PMID:11463354), (MGI:3045482|PMID:15158676), (MGI:3619189|PMID:12714507) RGD PMID:10381349, PMID:11463354, PMID:12714507, PMID:15158676 MGI:1339510, MGI:2148393, MGI:3045482, MGI:3619189 NCBI chr 5:57,121,768...57,168,610
Ensembl chr 5:57,121,769...57,168,610
JBrowse link
G Fkrp fukutin related protein ISO (MGI:2447230|PMID:12471058) RGD PMID:12471058 MGI:2447230 NCBI chr 1:78,733,461...78,740,803
Ensembl chr 1:78,733,508...78,739,107
JBrowse link
G Gal3st2 galactose-3-O-sulfotransferase 2 IBA
ISO
PMID:21873635
(MGI:3696920|PMID:15926885)
RGD PMID:15926885, PMID:21873635 MGI:3696920, RGD:13792537 NCBI chr 9:100,982,996...100,994,226
Ensembl chr 9:100,990,523...100,993,206
JBrowse link
G Gal3st4 galactose-3-O-sulfotransferase 4 ISO (PMID:11333265) RGD PMID:11333265 NCBI chr12:19,583,110...19,592,444
Ensembl chr12:19,583,110...19,592,000
JBrowse link
G Gcnt1 glucosaminyl (N-acetyl) transferase 1 ISO (PMID:23027862) RGD PMID:23027862 NCBI chr 1:236,547,729...236,585,037
Ensembl chr 1:236,580,034...236,585,035
JBrowse link
G Golph3 golgi phosphoprotein 3 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:23027862)
Ensembl
UniProt
RGD
PMID:23027862 GO_REF:0000024, GO_REF:0000107 NCBI chr 2:62,360,754...62,388,773
Ensembl chr 2:62,360,754...62,388,771
JBrowse link
G Ins2 insulin 2 ISO (PMID:8069456) RGD PMID:8069456 NCBI chr 1:215,856,967...215,858,034
Ensembl chr 1:215,856,971...215,858,034
JBrowse link
G St3gal2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 ISO (PMID:9266697) RGD PMID:9266697 NCBI chr19:43,273,251...43,324,265
Ensembl chr19:43,274,493...43,290,363
JBrowse link
G St3gal4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 ISO (PMID:8288606) RGD PMID:8288606 NCBI chr 8:36,264,741...36,314,811
Ensembl chr 8:36,264,750...36,314,811
JBrowse link
G Tnip1 TNFAIP3 interacting protein 1 ISO (PMID:9923610) RGD PMID:9923610 NCBI chr10:40,255,776...40,303,092
Ensembl chr10:40,255,776...40,296,470
JBrowse link
glycoprotein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07002848.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 1:86,873,253...86,888,958 JBrowse link
G Edem3 ER degradation enhancing alpha-mannosidase like protein 3 ISO (MGI:3654428|PMID:16431915) RGD PMID:16431915 MGI:3654428 NCBI chr13:69,135,095...69,197,708
Ensembl chr13:69,135,128...69,199,511
JBrowse link
G Fbxo17 F-box protein 17 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:86,903,762...86,919,238
Ensembl chr 1:86,914,137...86,919,236
JBrowse link
G Fbxo2 F-box protein 2 IBA
ISO
PMID:21873635
(MGI:3573989|PMID:15723043), (MGI:4821082|PMID:12140560)
RGD PMID:12140560, PMID:15723043, PMID:21873635 MGI:3573989, MGI:4821082, RGD:13792537 NCBI chr 5:164,972,483...164,977,912
Ensembl chr 5:164,972,480...164,977,916
JBrowse link
G Fbxo44 F-box protein 44 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:164,962,921...164,972,273
Ensembl chr 5:164,963,433...164,971,903
JBrowse link
G Fbxo6 F-box protein 6 IBA
ISO
PMID:21873635
(MGI:3573989|PMID:15723043)
RGD PMID:15723043, PMID:21873635 MGI:3573989, RGD:13792537 NCBI chr 5:164,956,285...164,962,075
Ensembl chr 5:164,956,280...164,959,851
JBrowse link
G Manba mannosidase beta IBA
ISO
ISS
PMID:21873635
(MGI:3615066|PMID:16377659), (MGI:57603|PMID:3447593)
GO_REF:0000024
RGD
UniProt
PMID:3447593, PMID:16377659, PMID:21873635 GO_REF:0000024, MGI:3615066, MGI:57603, RGD:13792537 NCBI chr 2:240,668,213...240,760,264
Ensembl chr 2:240,668,195...240,760,261
JBrowse link
G Nccrp1 NCCRP1, F-box associated domain containing IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:85,558,420...85,559,652
NCBI chr 1:85,213,578...85,218,030
Ensembl chr 1:85,213,652...85,217,258
JBrowse link
G Neu2 neuraminidase 2 ISO
IEA
(PMID:14613940)
GO_REF:0000107
RGD
Ensembl
PMID:14613940 GO_REF:0000107 NCBI chr 9:94,702,095...94,724,903
Ensembl chr 9:94,702,129...94,724,902
JBrowse link
G Neu4 neuraminidase 4 ISO (PMID:15213228), (PMID:15847605)
(MGI:4361102|PMID:19506080), (MGI:5427293|PMID:22393058)
RGD PMID:15213228, PMID:15847605, PMID:19506080, PMID:22393058 MGI:4361102, MGI:5427293 NCBI chr 9:101,284,902...101,290,558
Ensembl chr 9:101,284,902...101,290,558
JBrowse link
G Ngly1 N-glycanase 1 ISO
IBA
ISS
(PMID:15358861)
(MGI:3054122|PMID:15358861)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:15358861, PMID:21873635 GO_REF:0000024, MGI:3054122, RGD:13792537 NCBI chr15:10,405,453...10,455,973
Ensembl chr15:10,405,164...10,455,956
JBrowse link
G Stt3b STT3 oligosaccharyltransferase complex catalytic subunit B ISO (PMID:22607976) RGD PMID:22607976 NCBI chr 8:123,303,910...123,370,729
Ensembl chr 8:123,293,057...123,371,257
JBrowse link
heparan sulfate proteoglycan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3gat3 beta-1,3-glucuronyltransferase 3 ISO (PMID:21763480), (PMID:25893793) RGD PMID:21763480, PMID:25893793 NCBI chr 1:225,120,061...225,126,579
Ensembl chr 1:225,120,061...225,126,579
JBrowse link
G Ext1 exostosin glycosyltransferase 1 ISO (PMID:10639137), (PMID:9620772)
(MGI:3687782|PMID:10639137), (MGI:4431165|PMID:20080592)
RGD PMID:9620772, PMID:10639137, PMID:20080592 MGI:3687782, MGI:4431165 NCBI chr 7:92,605,008...92,881,392
Ensembl chr 7:92,605,728...92,882,068
JBrowse link
G Ext2 exostosin glycosyltransferase 2 ISO (PMID:17761672)
MGI:3608690 (MGI:3608483|PMID:16236767)
RGD PMID:16236767, PMID:17761672 MGI:3608483 NCBI chr 3:82,602,784...82,734,557
Ensembl chr 3:82,602,785...82,734,533
JBrowse link
G Extl3 exostosin-like glycosyltransferase 3 ISO (PMID:28132690), (PMID:28148688) RGD PMID:28132690, PMID:28148688 NCBI chr15:48,420,419...48,465,171
Ensembl chr15:48,422,492...48,445,592
JBrowse link
G Glce glucuronic acid epimerase ISO
IBA
(PMID:20118238), (PMID:30872481)
(MGI:2135754|PMID:11279150)
PMID:21873635
RGD PMID:11279150, PMID:20118238, PMID:30872481, PMID:21873635 MGI:2135754, RGD:13792537 NCBI chr 8:67,006,588...67,073,723
Ensembl chr 8:67,006,592...67,040,005
JBrowse link
G Hs6st1 heparan sulfate 6-O-sulfotransferase 1 ISO MGI:3715259 (MGI:3715036|PMID:17405882) RGD PMID:17405882 MGI:3715036 NCBI chr 9:42,620,006...42,659,184
Ensembl chr 9:42,620,006...42,659,184
JBrowse link
G Lipc lipase C, hepatic type IDA RGD PMID:15102889 RGD:1580511 NCBI chr 8:77,272,582...77,398,485
Ensembl chr 8:77,272,570...77,398,248
JBrowse link
G Ndst1 N-deacetylase and N-sulfotransferase 1 IMP PMID:9915799 UniProt PMID:9915799 RGD:12907548 NCBI chr18:55,951,497...56,014,107
Ensembl chr18:55,955,389...55,992,885
JBrowse link
G Ndst2 N-deacetylase and N-sulfotransferase 2 ISO MGI:1913285 (MGI:1343737|PMID:10466727) RGD PMID:10466727 MGI:1343737 NCBI chr15:3,995,797...4,006,491
Ensembl chr15:3,996,048...4,006,491
JBrowse link
G Ndst3 N-deacetylase and N-sulfotransferase 3 ISO (PMID:9915799) RGD PMID:9915799 NCBI chr 2:227,736,491...227,903,657
Ensembl chr 2:227,738,650...227,890,077
JBrowse link
G Ugdh UDP-glucose 6-dehydrogenase ISS
ISO
IEA
GO_REF:0000024
(MGI:2675908|PMID:14505572)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:14505572 GO_REF:0000024, GO_REF:0000107, MGI:2675908 NCBI chr14:44,479,614...44,502,845
Ensembl chr14:44,479,614...44,502,845
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 ISO MGI:1857642 (MGI:5498591|PMID:23760952) RGD PMID:23760952 MGI:5498591 NCBI chr13:90,379,203...90,405,627
Ensembl chr13:90,380,632...90,405,591
JBrowse link
G Xylt1 xylosyltransferase 1 IEA
IBA
ISO
ISS
GO_REF:0000041
PMID:21873635
(PMID:17189265)
GO_REF:0000024
UniProt
RGD
PMID:17189265, PMID:21873635 GO_REF:0000024, GO_REF:0000041, RGD:13792537 NCBI chr 1:186,939,698...187,264,758
Ensembl chr 1:187,149,453...187,261,632
JBrowse link
G Xylt2 xylosyltransferase 2 IEA
IBA
ISO
ISS
GO_REF:0000041
PMID:21873635
(PMID:17189265), (PMID:26027496)
GO_REF:0000024
UniProt
RGD
PMID:17189265, PMID:26027496, PMID:21873635 GO_REF:0000024, GO_REF:0000041, RGD:13792537 NCBI chr10:82,386,003...82,399,485
Ensembl chr10:82,386,005...82,399,485
JBrowse link
heparan sulfate proteoglycan biosynthetic process, enzymatic modification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hs2st1 heparan sulfate 2-O-sulfotransferase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:250,467,428...250,600,517
Ensembl chr 2:250,467,429...250,600,517
JBrowse link
G Hs3st5 heparan sulfate-glucosamine 3-sulfotransferase 5 ISO (PMID:12138164) RGD PMID:12138164 NCBI chr20:40,236,437...40,545,502
Ensembl chr20:40,236,437...40,545,494
JBrowse link
G Hs6st1 heparan sulfate 6-O-sulfotransferase 1 IBA
ISO
PMID:21873635
(MGI:1353793|PMID:10644753)
RGD PMID:10644753, PMID:21873635 MGI:1353793, RGD:13792537 NCBI chr 9:42,620,006...42,659,184
Ensembl chr 9:42,620,006...42,659,184
JBrowse link
G Hs6st2 heparan sulfate 6-O-sulfotransferase 2 IBA
ISO
PMID:21873635
(MGI:1353793|PMID:10644753)
RGD PMID:10644753, PMID:21873635 MGI:1353793, RGD:13792537 NCBI chr  X:138,675,326...138,972,774
Ensembl chr  X:138,677,580...138,972,684
JBrowse link
G Hs6st3 heparan sulfate 6-O-sulfotransferase 3 ISO (MGI:1353793|PMID:10644753) RGD PMID:10644753 MGI:1353793 NCBI chr15:104,448,479...105,254,540
Ensembl chr15:104,448,600...105,254,214
JBrowse link
heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ext1 exostosin glycosyltransferase 1 ISO (PMID:17761672) RGD PMID:17761672 NCBI chr 7:92,605,008...92,881,392
Ensembl chr 7:92,605,728...92,882,068
JBrowse link
G Ext2 exostosin glycosyltransferase 2 ISO (PMID:17761672) RGD PMID:17761672 NCBI chr 3:82,602,784...82,734,557
Ensembl chr 3:82,602,785...82,734,533
JBrowse link
G Hs2st1 heparan sulfate 2-O-sulfotransferase 1 IBA
ISO
PMID:21873635
MGI:1934916 (MGI:2150438|PMID:11457822)
RGD PMID:11457822, PMID:21873635 MGI:2150438, RGD:13792537 NCBI chr 2:250,467,428...250,600,517
Ensembl chr 2:250,467,429...250,600,517
JBrowse link
G Ndst1 N-deacetylase and N-sulfotransferase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:55,951,497...56,014,107
Ensembl chr18:55,955,389...55,992,885
JBrowse link
G Ndst2 N-deacetylase and N-sulfotransferase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:3,995,797...4,006,491
Ensembl chr15:3,996,048...4,006,491
JBrowse link
G Ndst3 N-deacetylase and N-sulfotransferase 3 ISO
IBA
(PMID:9915799)
PMID:21873635
RGD PMID:9915799, PMID:21873635 RGD:13792537 NCBI chr 2:227,736,491...227,903,657
Ensembl chr 2:227,738,650...227,890,077
JBrowse link
G Ndst4 N-deacetylase and N-sulfotransferase 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:229,170,781...229,496,732
Ensembl chr 2:229,196,616...229,496,516
JBrowse link
G NEWGENE_1304700 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:3,750,058...3,760,616
Ensembl chr15:3,754,262...3,760,663
JBrowse link
heparan sulfate proteoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07030903.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr10:108,469,856...108,473,377 JBrowse link
G Gpc1 glypican 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:12732622)
Ensembl
UniProt
RGD
PMID:12732622 GO_REF:0000024, GO_REF:0000107 NCBI chr 9:99,998,275...100,026,818
Ensembl chr 9:99,998,275...100,026,818
JBrowse link
G Hpse heparanase IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:12213822)
Ensembl
UniProt
RGD
PMID:12213822 GO_REF:0000024, GO_REF:0000107 NCBI chr14:10,534,358...10,576,686
Ensembl chr14:10,534,423...10,575,224
JBrowse link
G Sgsh N-sulfoglucosamine sulfohydrolase ISO (PMID:15146460) RGD PMID:15146460 NCBI chr10:108,469,312...108,479,094 JBrowse link
heparan sulfate proteoglycan metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sulf1 sulfatase 1 ISS
ISO
IBA
IEA
GO_REF:0000024
(MGI:5306289|PMID:18687675)
PMID:21873635
GO_REF:0000104
(PMID:18687675), (PMID:19666466), (PMID:19822709)
UniProt
RGD
PMID:18687675, PMID:19666466, PMID:19822709, PMID:21873635 GO_REF:0000024, GO_REF:0000104, MGI:5306289, RGD:13792537 NCBI chr 5:5,999,520...6,186,901
Ensembl chr 5:5,999,475...6,186,329
JBrowse link
G Sulf2 sulfatase 2 ISO
IBA
(PMID:18687675)
(MGI:5306289|PMID:18687675)
PMID:21873635
RGD PMID:18687675, PMID:21873635 MGI:5306289, RGD:13792537 NCBI chr 3:162,791,349...162,872,984
Ensembl chr 3:162,791,355...162,872,831
JBrowse link
mannose trimming involved in glycoprotein ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 ISO (PMID:25092655) RGD PMID:25092655 NCBI chr 4:140,886,644...140,918,654
Ensembl chr 4:140,886,545...140,915,779
JBrowse link
G Edem2 ER degradation enhancing alpha-mannosidase like protein 2 ISO (PMID:25092655) RGD PMID:25092655 NCBI chr 3:151,232,741...151,258,559
Ensembl chr 3:151,232,751...151,258,580
JBrowse link
G Edem3 ER degradation enhancing alpha-mannosidase like protein 3 ISO (PMID:25092655)
(MGI:3654428|PMID:16431915)
RGD PMID:16431915, PMID:25092655 MGI:3654428 NCBI chr13:69,135,095...69,197,708
Ensembl chr13:69,135,128...69,199,511
JBrowse link
G Man1a1 mannosidase, alpha, class 1A, member 1 ISO (PMID:27108681) RGD PMID:27108681 NCBI chr20:35,257,688...35,450,132
Ensembl chr20:35,257,985...35,450,513
JBrowse link
G Man1b1 mannosidase, alpha, class 1B, member 1 ISO (PMID:18003979), (PMID:21062743) RGD PMID:18003979, PMID:21062743 NCBI chr 3:2,547,259...2,569,051
Ensembl chr 3:2,547,986...2,569,049
JBrowse link
N-glycan processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fut8 fucosyltransferase 8 IEA
ISO
GO_REF:0000107
(MGI:5613435|PMID:24619415)
Ensembl
RGD
PMID:24619415 GO_REF:0000107, MGI:5613435 NCBI chr 6:100,305,957...100,537,208
Ensembl chr 6:100,337,226...100,537,224
JBrowse link
G Ganab glucosidase II alpha subunit ISO (PMID:10929008)
(MGI:6158858|PMID:27462106)
RGD PMID:10929008, PMID:27462106 MGI:6158858 NCBI chr 1:225,096,558...225,116,384
Ensembl chr 1:225,096,598...225,116,378
JBrowse link
G Man1a1 mannosidase, alpha, class 1A, member 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:35,257,688...35,450,132
Ensembl chr20:35,257,985...35,450,513
JBrowse link
G Man1a2 mannosidase, alpha, class 1A, member 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:202,891,537...203,043,847
Ensembl chr 2:202,891,537...203,043,847
JBrowse link
G Man1b1 mannosidase, alpha, class 1B, member 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:2,547,259...2,569,051
Ensembl chr 3:2,547,986...2,569,049
JBrowse link
G Man1c1 mannosidase, alpha, class 1C, member 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:152,775,031...152,920,130
Ensembl chr 5:152,774,855...152,920,343
JBrowse link
G Man2a1 mannosidase, alpha, class 2A, member 1 IBA
ISO
IDA
PMID:21873635
MGI:2150656 (MGI:3652665|PMID:16754854)
PMID:1885615
RGD PMID:16754854, PMID:21873635, PMID:1885615 MGI:3652665, RGD:13792537, RGD:38501079 NCBI chr 9:112,293,388...112,451,677
Ensembl chr 9:112,293,388...112,451,677
JBrowse link
G Man2a2 mannosidase, alpha, class 2A, member 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:142,141,695...142,164,561
Ensembl chr 1:142,143,799...142,164,263
JBrowse link
G Prkcsh protein kinase C substrate 80K-H ISO
IBA
(PMID:10929008)
PMID:21873635
RGD PMID:10929008, PMID:21873635 RGD:13792537 NCBI chr 8:23,014,802...23,026,507
Ensembl chr 8:23,014,956...23,026,503
JBrowse link
G St8sia1 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:177,065,266...177,195,942
Ensembl chr 4:177,065,168...177,196,180
JBrowse link
G St8sia2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 ISO
IBA
(PMID:10766765)
PMID:21873635
RGD PMID:10766765, PMID:21873635 RGD:13792537 NCBI chr 1:135,336,374...135,406,699
Ensembl chr 1:135,336,374...135,406,700
JBrowse link
G St8sia3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 ISO
IBA
(PMID:10766765), (PMID:26192331)
PMID:21873635
RGD PMID:10766765, PMID:26192331, PMID:21873635 RGD:13792537 NCBI chr18:59,748,766...59,755,257
Ensembl chr18:59,748,444...59,755,226
JBrowse link
G St8sia4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 ISO
IBA
(PMID:10766765)
PMID:21873635
RGD PMID:10766765, PMID:21873635 RGD:13792537 NCBI chr 9:103,117,705...103,207,154
Ensembl chr 9:103,117,506...103,207,190
JBrowse link
G St8sia6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:80,960,785...81,002,830
Ensembl chr17:80,960,785...81,002,838
JBrowse link
N-glycan processing to lysosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnptab N-acetylglucosamine-1-phosphate transferase subunits alpha and beta ISO
IBA
(PMID:19938078), (PMID:25505245)
PMID:21873635
RGD PMID:19938078, PMID:25505245, PMID:21873635 RGD:13792537 NCBI chr 7:28,956,363...29,023,232
Ensembl chr 7:28,956,512...29,022,868
JBrowse link
negative regulation by host of viral glycoprotein metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcs amyloid P component, serum ISO
IEA
(PMID:23544079)
GO_REF:0000107
RGD
Ensembl
PMID:23544079 GO_REF:0000107 NCBI chr13:91,426,621...91,427,417
Ensembl chr13:91,426,479...91,427,575
JBrowse link
G Ptx3 pentraxin 3 ISO (PMID:23544079) RGD PMID:23544079 NCBI chr 2:158,097,843...158,103,653
Ensembl chr 2:158,097,843...158,103,653
JBrowse link
negative regulation of amyloid precursor protein biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aatf apoptosis antagonizing transcription factor ISO (MGI:3028747|PMID:14627703) RGD PMID:14627703 MGI:3028747 NCBI chr10:71,744,648...71,837,851
Ensembl chr10:71,744,659...71,837,851
JBrowse link
G Abca7 ATP binding cassette subfamily A member 7 ISS
ISO
GO_REF:0000024
(MGI:5553242|PMID:18429932)
Alzheimers_University_of_Toronto
RGD
PMID:18429932 GO_REF:0000024, MGI:5553242 NCBI chr 7:12,742,433...12,762,423
Ensembl chr 7:12,742,433...12,762,341
JBrowse link
G Ago2 argonaute RISC catalytic component 2 IMP PMID:20395292 ARUK-UCL PMID:20395292 RGD:14390059 NCBI chr 7:114,339,607...114,377,277
Ensembl chr 7:114,339,434...114,380,613
JBrowse link
G Bace2 beta-secretase 2 ISO
ISS
(PMID:12801932)
GO_REF:0000024
RGD
UniProt
PMID:12801932 GO_REF:0000024 NCBI chr11:37,798,397...37,880,624
Ensembl chr11:37,798,370...37,880,821
JBrowse link
G Itm2a integral membrane protein 2A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:78,490,872...78,496,814
Ensembl chr  X:78,490,866...78,496,847
JBrowse link
G Itm2b integral membrane protein 2B ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:16027166), (PMID:18524908)
UniProt
RGD
PMID:16027166, PMID:18524908, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr15:55,254,703...55,277,713
Ensembl chr15:55,254,706...55,277,713
JBrowse link
G Itm2c integral membrane protein 2C IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:92,916,469...92,930,306
Ensembl chr 9:92,916,469...92,930,279
JBrowse link
negative regulation of CD4 production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot8 acyl-CoA thioesterase 8 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:9153233)
Ensembl
UniProt
RGD
PMID:9153233 GO_REF:0000024, GO_REF:0000107 NCBI chr 3:161,260,837...161,272,495
Ensembl chr 3:161,259,735...161,272,460
JBrowse link
negative regulation of elastin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hbegf heparin-binding EGF-like growth factor IDA PMID:12882762 UniProt PMID:12882762 RGD:8554842 NCBI chr18:29,330,302...29,340,185
Ensembl chr18:29,329,764...29,340,403
JBrowse link
negative regulation of elastin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cst3 cystatin C ISO (PMID:10545518) RGD PMID:10545518 NCBI chr 3:143,219,671...143,223,544
Ensembl chr 3:143,219,686...143,223,615
JBrowse link
negative regulation of FasL production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jak3 Janus kinase 3 ISS
ISO
GO_REF:0000024
(MGI:3655405|PMID:9498750)
BHF-UCL
RGD
PMID:9498750 GO_REF:0000024, MGI:3655405 NCBI chr16:20,107,471...20,120,678
Ensembl chr16:20,109,200...20,120,668
JBrowse link
negative regulation of glycoprotein metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcs amyloid P component, serum ISO (PMID:23544079) RGD PMID:23544079 NCBI chr13:91,426,621...91,427,417
Ensembl chr13:91,426,479...91,427,575
JBrowse link
G Ptx3 pentraxin 3 ISO (PMID:23544079) RGD PMID:23544079 NCBI chr 2:158,097,843...158,103,653
Ensembl chr 2:158,097,843...158,103,653
JBrowse link
negative regulation of protein glycosylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mgat4d MGAT4 family, member D ISO (MGI:5887193|PMID:20805325) RGD PMID:20805325 MGI:5887193 NCBI chr19:24,494,366...24,534,039
Ensembl chr19:24,496,569...24,532,772
JBrowse link
G Oga O-GlcNAcase IMP RGD PMID:16332679 RGD:2305959 NCBI chr 1:265,506,752...265,542,452
Ensembl chr 1:265,507,451...265,542,276
JBrowse link
negative regulation of protein glycosylation in Golgi term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acer2 alkaline ceramidase 2 ISO (PMID:20089856) RGD PMID:20089856 NCBI chr 5:105,230,540...105,279,732
Ensembl chr 5:105,230,580...105,279,731
JBrowse link
G Tmem59 transmembrane protein 59 ISO (PMID:20427278) RGD PMID:20427278 NCBI chr 5:126,783,061...126,804,177
Ensembl chr 5:126,783,061...126,804,175
JBrowse link
negative regulation of proteoglycan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc2a10 solute carrier family 2 member 10 ISO (PMID:16550171) RGD PMID:16550171 NCBI chr 3:162,182,156...162,194,610
Ensembl chr 3:162,181,974...162,194,804
JBrowse link
O-glycan processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1galt1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:33,890,353...33,943,219
Ensembl chr 4:33,890,349...33,943,211
JBrowse link
G Galnt10 polypeptide N-acetylgalactosaminyltransferase 10 ISO (PMID:18562306), (PMID:19460755) RGD PMID:18562306, PMID:19460755 NCBI chr10:43,067,316...43,208,992
Ensembl chr10:43,067,299...43,210,427
JBrowse link
G Galnt2 polypeptide N-acetylgalactosaminyltransferase 2 ISO (PMID:18562306) RGD PMID:18562306 NCBI chr19:57,043,858...57,115,123
Ensembl chr19:57,047,830...57,115,132
JBrowse link
G Gxylt1 glucoside xylosyltransferase 1 ISO
IBA
ISS
(PMID:19940119)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:19940119, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 7:134,447,578...134,495,858
Ensembl chr 7:134,447,578...134,495,835
JBrowse link
G Gxylt2 glucoside xylosyltransferase 2 ISO
IBA
(PMID:19940119)
PMID:21873635
RGD PMID:19940119, PMID:21873635 RGD:13792537 NCBI chr 4:133,179,185...133,263,493
Ensembl chr 4:133,179,309...133,262,841
JBrowse link
G Pomgnt1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:27493216)
UniProt
RGD
PMID:27493216, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 5:135,007,343...135,017,220
Ensembl chr 5:135,007,343...135,017,218
JBrowse link
G Xxylt1 xyloside xylosyltransferase 1 ISO (PMID:22117070), (PMID:8982869)
(MGI:5796071|PMID:26414444)
RGD PMID:8982869, PMID:22117070, PMID:26414444 MGI:5796071 NCBI chr11:73,198,404...73,330,682
Ensembl chr11:73,198,522...73,329,083
JBrowse link
O-glycan processing, core 1 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1galt1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:33,890,353...33,943,219
Ensembl chr 4:33,890,349...33,943,211
JBrowse link
G C1galt1c1 C1GALT1-specific chaperone 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:124,921,686...124,926,171
Ensembl chr  X:124,921,728...124,926,171
JBrowse link
peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07060833.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 4:96,562,725...96,564,611 JBrowse link
G Bgn biglycan ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr  X:157,319,042...157,331,204
Ensembl chr  X:157,319,046...157,331,204
JBrowse link
G Dcn decorin ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 7:38,742,250...38,782,282
Ensembl chr 7:38,742,051...38,782,323
JBrowse link
G Egflam EGF-like, fibronectin type III and laminin G domains IEA
ISO
GO_REF:0000107
(MGI:3807344|PMID:18757743)
Ensembl
RGD
PMID:18757743 GO_REF:0000107, MGI:3807344 NCBI chr 2:56,503,002...56,681,334
Ensembl chr 2:56,502,807...56,679,955
JBrowse link
G Mamdc2 MAM domain containing 2 ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 1:241,071,110...241,223,798
Ensembl chr 1:241,072,072...241,155,537
JBrowse link
G Ndnf neuron-derived neurotrophic factor ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 4:96,528,830...96,565,780 JBrowse link
G Prss34 protease, serine, 34 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr10:14,656,812...14,658,569
Ensembl chr10:14,656,812...14,658,569
JBrowse link
G Spock2 SPARC/osteonectin, cwcv and kazal like domains proteoglycan 2 ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr20:29,654,926...29,679,927
Ensembl chr20:29,655,226...29,677,926
JBrowse link
G Spock3 SPARC/osteonectin, cwcv and kazal like domains proteoglycan 3 ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr16:28,372,067...28,716,762
Ensembl chr16:28,372,411...28,716,885
JBrowse link
positive regulation of amyloid precursor protein biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 ISO
IEA
(PMID:20704561)
GO_REF:0000107
RGD
Ensembl
PMID:20704561 GO_REF:0000107 NCBI chr 3:2,648,787...2,668,770
Ensembl chr 3:2,648,885...2,668,809
JBrowse link
G Ncstn nicastrin ISO (MGI:5569714|PMID:23826707) RGD PMID:23826707 MGI:5569714 NCBI chr13:90,451,046...90,467,256
Ensembl chr13:90,451,044...90,467,256
JBrowse link
G Pawr pro-apoptotic WT1 regulator IEA
ISO
GO_REF:0000107
(MGI:3028747|PMID:14627703)
Ensembl
RGD
PMID:14627703 GO_REF:0000107, MGI:3028747 NCBI chr 7:51,273,764...51,353,700
Ensembl chr 7:51,273,771...51,353,068
JBrowse link
G Soat1 sterol O-acyltransferase 1 ISO
IEA
(PMID:17412327)
GO_REF:0000107
RGD
Ensembl
PMID:17412327 GO_REF:0000107 NCBI chr13:74,035,258...74,077,759
Ensembl chr13:74,035,080...74,077,783
JBrowse link
positive regulation of CD24 production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plcb1 phospholipase C beta 1 ISS
ISO
GO_REF:0000024
(MGI:4943410|PMID:15849202)
BHF-UCL
RGD
PMID:15849202 GO_REF:0000024, MGI:4943410 NCBI chr 3:127,721,244...128,419,565
Ensembl chr 3:128,155,069...128,419,545
JBrowse link
positive regulation of CD80 production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il33 interleukin 33 IEA
ISO
GO_REF:0000107
(MGI:6414704|PMID:26936882)
Ensembl
RGD
PMID:26936882 GO_REF:0000107, MGI:6414704 NCBI chr 1:248,112,611...248,147,030
Ensembl chr 1:248,132,090...248,147,029
JBrowse link
positive regulation of CD86 production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il33 interleukin 33 IEA
ISO
GO_REF:0000107
(MGI:6414704|PMID:26936882)
Ensembl
RGD
PMID:26936882 GO_REF:0000107, MGI:6414704 NCBI chr 1:248,112,611...248,147,030
Ensembl chr 1:248,132,090...248,147,029
JBrowse link
positive regulation of glycoprotein biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl19 C-C motif chemokine ligand 19 ISO (MGI:3576832|PMID:15845453) RGD PMID:15845453 MGI:3576832 NCBI chr 5:58,181,025...58,182,969
Ensembl chr 5:58,181,026...58,183,017
JBrowse link
G Ccl21 C-C motif chemokine ligand 21 ISO (MGI:3576832|PMID:15845453) RGD PMID:15845453 MGI:3576832 NCBI chr 5:58,197,678...58,198,782
Ensembl chr 5:58,197,680...58,198,782
JBrowse link
G Ep300 E1A binding protein p300 IMP fibronectin RGD PMID:17065349 RGD:2312275 NCBI chr 7:122,818,194...122,889,055
Ensembl chr 7:122,818,975...122,861,296
JBrowse link
G Igf1 insulin-like growth factor 1 ISO
IEA
(PMID:9564845)
GO_REF:0000107
RGD
Ensembl
PMID:9564845 GO_REF:0000107 NCBI chr 7:28,412,123...28,491,815
Ensembl chr 7:28,412,198...28,486,609
JBrowse link
G Insr insulin receptor IMP P-glycoprotein RGD PMID:19049803 RGD:2307019 NCBI chr12:1,682,527...1,816,414
Ensembl chr12:1,680,957...1,816,414
JBrowse link
positive regulation of glycoprotein biosynthetic process involved in immunological synapse formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccr7 C-C motif chemokine receptor 7 ISO (MGI:3576832|PMID:15845453) RGD PMID:15845453 MGI:3576832 NCBI chr10:87,057,335...87,067,444
Ensembl chr10:87,057,136...87,067,456
JBrowse link
positive regulation of glycoprotein metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100363782 RAB1B, member RAS oncogene family-like IEA GO_REF:0000107 Ensembl GO_REF:0000107 Ensembl chr 1:220,480,834...220,491,469 JBrowse link
G LOC102555167 ras-related protein Rab-1B-like IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:220,480,828...220,491,456
Ensembl chr 1:220,480,834...220,491,469
JBrowse link
G Rab1a RAB1A, member RAS oncogene family ISO UniProtKB:Q9H0U4 (PMID:21680502) RGD PMID:21680502 NCBI chr14:104,475,082...104,500,176
Ensembl chr14:104,475,082...104,501,020
JBrowse link
G Rab1b RAB1B, member RAS oncogene family IEA
ISO
GO_REF:0000107
UniProtKB:P62820 (PMID:21680502)
Ensembl
RGD
PMID:21680502 GO_REF:0000107 NCBI chr 1:220,483,529...220,491,469
Ensembl chr 1:220,480,834...220,491,469
JBrowse link
positive regulation of heparan sulfate proteoglycan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 ISO
IEA
ISS
(PMID:15853773)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:15853773 GO_REF:0000024, GO_REF:0000107 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Pxylp1 2-phosphoxylose phosphatase 1 ISO
ISS
(PMID:24425863)
GO_REF:0000024
RGD
UniProt
PMID:24425863 GO_REF:0000024 NCBI chr 8:104,724,728...104,790,639
Ensembl chr 8:104,724,743...104,790,639
JBrowse link
G Tcf7l2 transcription factor 7 like 2 ISO (PMID:15853773) RGD PMID:15853773 NCBI chr 1:276,686,911...276,730,517
Ensembl chr 1:276,659,542...276,730,514
Ensembl chr 1:276,659,542...276,730,514
JBrowse link
positive regulation of protein glycosylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chp1 calcineurin-like EF-hand protein 1 IDA PMID:21543739 UniProt PMID:21543739 RGD:8554239 NCBI chr 3:111,354,506...111,389,998
Ensembl chr 3:111,354,506...111,389,989
JBrowse link
G Golga2 golgin A2 ISO (PMID:22735382) RGD PMID:22735382 NCBI chr 3:11,317,328...11,337,569
Ensembl chr 3:11,317,183...11,336,458
JBrowse link
G Ramp1 receptor activity modifying protein 1 ISO (PMID:9620797) RGD PMID:9620797 NCBI chr 9:98,313,632...98,364,206
Ensembl chr 9:98,313,632...98,364,205
JBrowse link
G Slc51b solute carrier family 51 subunit beta ISO (MGI:5437400|PMID:22535958) RGD PMID:22535958 MGI:5437400 NCBI chr 8:70,930,196...70,938,559
Ensembl chr 8:70,930,347...70,932,986
JBrowse link
positive regulation of protein glycosylation in Golgi term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arfgef1 ADP ribosylation factor guanine nucleotide exchange factor 1 ISO
ISS
(PMID:17227842)
GO_REF:0000024
RGD
UniProt
PMID:17227842 GO_REF:0000024 NCBI chr 5:8,666,046...8,760,458
Ensembl chr 5:8,666,200...8,760,458
JBrowse link
positive regulation of protein O-linked glycosylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il15 interleukin 15 ISO (MGI:5567847|PMID:24509081) RGD PMID:24509081 MGI:5567847 NCBI chr19:23,542,606...23,624,366
Ensembl chr19:23,542,889...23,554,594
JBrowse link
G Pomt1 protein-O-mannosyltransferase 1 IDA RGD PMID:16704966 RGD:11532759 NCBI chr 3:11,253,424...11,271,873
Ensembl chr 3:11,254,026...11,271,872
JBrowse link
G Pomt2 protein-O-mannosyltransferase 2 IDA RGD PMID:16704966 RGD:11532759 NCBI chr 6:111,137,329...111,176,991
Ensembl chr 6:111,135,349...111,176,918
JBrowse link
positive regulation of proteoglycan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mustn1 musculoskeletal, embryonic nuclear protein 1 ISO (MGI:5703727|PMID:19410023) RGD PMID:19410023 MGI:5703727 NCBI chr16:6,962,737...6,964,987
Ensembl chr16:6,962,722...6,964,989
JBrowse link
G Slc2a10 solute carrier family 2 member 10 ISO (PMID:16550171) RGD PMID:16550171 NCBI chr 3:162,182,156...162,194,610
Ensembl chr 3:162,181,974...162,194,804
JBrowse link
protein alpha-1,2-demannosylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Man1b1 mannosidase, alpha, class 1B, member 1 ISO (PMID:10521544), (PMID:22160784) RGD PMID:10521544, PMID:22160784 NCBI chr 3:2,547,259...2,569,051
Ensembl chr 3:2,547,986...2,569,049
JBrowse link
protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpy19l1 dpy-19 like C-mannosyltransferase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:25,582,938...25,669,394
Ensembl chr 8:25,582,938...25,669,394
JBrowse link
G Dpy19l2 dpy-19 like 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:25,710,492...25,829,589
Ensembl chr 8:25,710,472...25,829,569
JBrowse link
G Dpy19l3 dpy-19 like C-mannosyltransferase 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:92,002,927...92,069,855
Ensembl chr 1:92,002,927...92,069,160
JBrowse link
G Dpy19l4 dpy-19 like 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:24,503,074...24,560,077
Ensembl chr 5:24,504,614...24,560,063
JBrowse link
protein deglycosylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aga aspartylglucosaminidase ISO
IBA
(PMID:1281977), (PMID:1904874)
PMID:21873635
RGD PMID:1281977, PMID:1904874, PMID:21873635 RGD:13792537 NCBI chr16:41,222,225...41,234,169
Ensembl chr16:41,222,238...41,234,095
JBrowse link
G Engase endo-beta-N-acetylglucosaminidase IBA
ISO
PMID:21873635
(MGI:5615299|PMID:25605922)
RGD PMID:25605922, PMID:21873635 MGI:5615299, RGD:13792537 NCBI chr10:107,502,636...107,515,300
Ensembl chr10:107,502,695...107,515,371
JBrowse link
G Man2a1 mannosidase, alpha, class 2A, member 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:112,293,388...112,451,677
Ensembl chr 9:112,293,388...112,451,677
JBrowse link
G Man2a2 mannosidase, alpha, class 2A, member 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:142,141,695...142,164,561
Ensembl chr 1:142,143,799...142,164,263
JBrowse link
G Ngly1 N-glycanase 1 ISO
IBA
UniProtKB:Q02890 (PMID:28826503)
PMID:21873635
RGD PMID:28826503, PMID:21873635 RGD:13792537 NCBI chr15:10,405,453...10,455,973
Ensembl chr15:10,405,164...10,455,956
JBrowse link
G Oga O-GlcNAcase IEA
ISO
GO_REF:0000107
(PMID:11148210)
Ensembl
RGD
PMID:11148210 GO_REF:0000107 NCBI chr 1:265,506,752...265,542,452
Ensembl chr 1:265,507,451...265,542,276
JBrowse link
G Park7 Parkinsonism associated deglycase NOT ISO
IEA
ISS
(PMID:27903648)
(PMID:25416785), (PMID:26995087), (PMID:30894531)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:25416785, PMID:26995087, PMID:27903648, PMID:30894531 GO_REF:0000024, GO_REF:0000107 NCBI chr 5:167,982,438...168,004,724
Ensembl chr 5:167,982,439...168,004,724
JBrowse link
protein galactosylation at cell surface term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A3galt2 alpha 1,3-galactosyltransferase 2 NOT IDA PMID:12626403 UniProt PMID:12626403 RGD:632674 NCBI chr 5:146,933,592...146,945,882
Ensembl chr 5:146,933,592...146,945,880
JBrowse link
G Ggta1 glycoprotein, alpha-galactosyltransferase 1 IDA
ISO
PMID:12626403
(MGI:5553248|PMID:12626403)
RGD PMID:12626403, PMID:12626403 MGI:5553248, RGD:632674 NCBI chr 3:14,614,099...14,701,185
Ensembl chr 3:14,614,122...14,644,951
JBrowse link
protein glycosylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abo ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:4,374,679...4,394,374
Ensembl chr 3:4,374,602...4,394,428
JBrowse link
G Abo3 histo-blood group ABO system transferase 3 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:5,109,880...5,127,376
Ensembl chr 3:5,118,956...5,126,901
JBrowse link
G Alg1 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase ISO
IBA
(PMID:26931382)
PMID:21873635
RGD PMID:26931382, PMID:21873635 RGD:13792537 NCBI chr10:10,539,930...10,550,178
Ensembl chr10:10,539,930...10,550,138
JBrowse link
G Alg3 ALG3, alpha-1,3- mannosyltransferase IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr11:83,985,484...83,991,706
Ensembl chr11:83,986,230...83,991,706
JBrowse link
G B3galnt1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 2:166,226,736...166,255,978
Ensembl chr 2:166,226,754...166,255,302
JBrowse link
G B3galnt2 beta-1,3-N-acetylgalactosaminyltransferase 2 ISO (PMID:23453667) RGD PMID:23453667 NCBI chr17:54,027,859...54,070,399
Ensembl chr17:54,027,859...54,070,399
JBrowse link
G B3galt1 Beta-1,3-galactosyltransferase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:53,699,409...54,269,612
Ensembl chr 3:54,253,949...54,267,292
JBrowse link
G B3galt2 Beta-1,3-galactosyltransferase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:60,435,946...60,444,957
Ensembl chr13:60,435,946...60,444,957
JBrowse link
G B3galt4 Beta-1,3-galactosyltransferase 4 IEA
IBA
GO_REF:0000002
PMID:21873635
GO_REF:0000041
InterPro
UniProt
PMID:21873635 GO_REF:0000002, GO_REF:0000041, RGD:13792537 NCBI chr20:5,446,104...5,447,679
Ensembl chr20:5,446,104...5,447,673
JBrowse link
G B3galt5 Beta-1,3-galactosyltransferase 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:36,638,067...36,683,915
Ensembl chr11:36,634,662...36,683,672
JBrowse link
G B3galt6 Beta-1,3-galactosyltransferase 6 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:173,423,475...173,425,611
Ensembl chr 5:173,423,475...173,425,611
JBrowse link
G B3gat1 beta-1,3-glucuronyltransferase 1 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 8:27,777,024...27,804,368
Ensembl chr 8:27,777,179...27,804,515
JBrowse link
G B3gat2 beta-1,3-glucuronyltransferase 2 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 9:29,984,077...30,068,649
Ensembl chr 9:29,984,077...30,068,649
JBrowse link
G B3gat3 beta-1,3-glucuronyltransferase 3 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:225,120,061...225,126,579
Ensembl chr 1:225,120,061...225,126,579
JBrowse link
G B3gnt2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 IBA
ISO
PMID:21873635
MGI:3576265 (MGI:3575344|PMID:15728829)
RGD PMID:15728829, PMID:21873635 MGI:3575344, RGD:13792537 NCBI chr14:107,592,336...107,617,189
Ensembl chr14:107,592,336...107,617,161
JBrowse link
G B3gnt3 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:20,123,948...20,133,482
Ensembl chr16:20,123,948...20,133,322
JBrowse link
G B3gnt4 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:38,503,361...38,506,793
Ensembl chr12:38,503,361...38,504,774
JBrowse link
G B3gnt5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr11:84,919,055...84,931,160
Ensembl chr11:84,919,066...84,931,160
JBrowse link
G B3gnt6 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:163,143,027...163,149,496
Ensembl chr 1:163,143,917...163,148,948
JBrowse link
G B3gnt7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 9:93,326,283...93,330,234
Ensembl chr 9:93,326,283...93,330,233
JBrowse link
G B3gnt8 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:82,419,264...82,422,852
Ensembl chr 1:82,419,947...82,422,846
JBrowse link
G B3gnt9 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:37,208,061...37,212,400
Ensembl chr19:37,208,825...37,210,412
JBrowse link
G B4galnt2 beta-1,4-N-acetyl-galactosaminyl transferase 2 ISO MGI:3618460 (MGI:1327771|PMID:9989502) RGD PMID:9989502 MGI:1327771 NCBI chr10:83,677,768...83,701,487 JBrowse link
G B4galt1 beta-1,4-galactosyltransferase 1 ISO MGI:2450889 (MGI:87365|PMID:9155011) RGD PMID:9155011 MGI:87365 NCBI chr 5:57,121,768...57,168,610
Ensembl chr 5:57,121,769...57,168,610
JBrowse link
G B4galt2 beta-1,4-galactosyltransferase 2 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:136,707,510...136,717,345
Ensembl chr 5:136,707,510...136,715,981
JBrowse link
G B4galt3 beta-1,4-galactosyltransferase 3 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr13:89,643,847...89,649,880
Ensembl chr13:89,643,881...89,649,906
JBrowse link
G B4galt4 beta-1,4-galactosyltransferase 4 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr11:64,558,006...64,584,054
Ensembl chr11:64,557,977...64,583,994
JBrowse link
G B4galt5 beta-1,4-galactosyltransferase 5 IEA
ISO
GO_REF:0000041
(MGI:6271343|PMID:29415997)
UniProt
RGD
PMID:29415997 GO_REF:0000041, MGI:6271343 NCBI chr 3:164,039,731...164,055,561
Ensembl chr 3:164,039,731...164,095,878
JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr18:15,462,913...15,525,584
Ensembl chr18:15,462,913...15,525,579
JBrowse link
G B4gat1 beta-1,4-glucuronyltransferase 1 ISO MGI:5470461 (MGI:5470500|PMID:23217742) RGD PMID:23217742 MGI:5470500 NCBI chr 1:220,322,854...220,325,076
Ensembl chr 1:220,416,018...220,418,240
JBrowse link
G Cog3 component of oligomeric golgi complex 3 ISO (PMID:16420527) RGD PMID:16420527 NCBI chr15:57,753,814...57,805,627
Ensembl chr15:57,755,189...57,805,184
JBrowse link
G Cog7 component of oligomeric golgi complex 7 ISO (PMID:15107842), (PMID:16420527) RGD PMID:15107842, PMID:16420527 NCBI chr 1:191,889,332...191,948,977
Ensembl chr 1:191,857,556...191,948,977
JBrowse link
G Crppa CDP-L-ribitol pyrophosphorylase A IEA
ISO
GO_REF:0000041
MGI:5470460 (MGI:5470500|PMID:23217742)
UniProt
RGD
PMID:23217742 GO_REF:0000041, MGI:5470500 NCBI chr 6:55,880,136...56,159,466
Ensembl chr 6:55,881,387...56,159,464
JBrowse link
G Dad1 defender against cell death 1 ISS
ISO
GO_REF:0000024
(PMID:12887896)
UniProt
RGD
PMID:12887896 GO_REF:0000024 NCBI chr15:32,868,136...32,887,933
Ensembl chr15:32,868,087...32,888,095
JBrowse link
G Ddost dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit ISS
ISO
GO_REF:0000024
(PMID:12887896)
UniProt
RGD
PMID:12887896 GO_REF:0000024 NCBI chr 5:156,668,924...156,676,036
Ensembl chr 5:156,668,712...156,676,035
JBrowse link
G Dpm2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:11,587,941...11,590,528
Ensembl chr 3:11,587,941...11,590,528
JBrowse link
G Dpm3 dolichyl-phosphate mannosyltransferase subunit 3, regulatory IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:188,583,664...188,584,179
Ensembl chr 2:188,583,664...188,584,179
JBrowse link
G Ext1 exostosin glycosyltransferase 1 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:92,605,008...92,881,392
Ensembl chr 7:92,605,728...92,882,068
JBrowse link
G Ext2 exostosin glycosyltransferase 2 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:82,602,784...82,734,557
Ensembl chr 3:82,602,785...82,734,533
JBrowse link
G Extl1 exostosin-like glycosyltransferase 1 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:152,573,755...152,588,956
Ensembl chr 5:152,573,758...152,589,719
JBrowse link
G Extl2 exostosin-like glycosyltransferase 2 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:218,951,112...218,972,576
Ensembl chr 2:218,951,141...218,971,886
JBrowse link
G Extl3 exostosin-like glycosyltransferase 3 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:48,420,419...48,465,171
Ensembl chr15:48,422,492...48,445,592
JBrowse link
G Fut1 fucosyltransferase 1 IEA
ISO
IBA
ISS
GO_REF:0000041
(MGI:1933681|PMID:11368156)
PMID:21873635
GO_REF:0000024
UniProt
RGD
PMID:11368156, PMID:21873635 GO_REF:0000024, GO_REF:0000041, MGI:1933681, RGD:13792537 NCBI chr 1:101,599,018...101,602,440
Ensembl chr 1:101,599,018...101,602,436
JBrowse link
G Fut10 fucosyltransferase 10 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr16:64,623,246...64,716,248
Ensembl chr16:64,631,264...64,716,224
JBrowse link
G Fut11 fucosyltransferase 11 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr15:4,031,504...4,035,064
Ensembl chr15:4,031,504...4,035,064
JBrowse link
G Fut2 fucosyltransferase 2 IEA
ISO
IBA
GO_REF:0000041
(MGI:2136486|PMID:11323419)
PMID:21873635
UniProt
RGD
PMID:11323419, PMID:21873635 GO_REF:0000041, MGI:2136486, RGD:13792537 NCBI chr 1:101,631,633...101,651,668
Ensembl chr 1:101,631,635...101,651,668
JBrowse link
G Fut4 fucosyltransferase 4 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 8:13,258,768...13,262,729
Ensembl chr 8:13,258,768...13,262,729
JBrowse link
G Fut7 fucosyltransferase 7 ISO
IEA
(PMID:11404359)
GO_REF:0000041
RGD
UniProt
PMID:11404359 GO_REF:0000041 NCBI chr 3:2,637,281...2,646,497
Ensembl chr 3:2,642,531...2,646,648
JBrowse link
G Fut9 fucosyltransferase 9 IEA
ISO
GO_REF:0000041
(MGI:3522398|PMID:15364956)
UniProt
RGD
PMID:15364956 GO_REF:0000041, MGI:3522398 NCBI chr 5:40,032,855...40,237,591
Ensembl chr 5:40,032,855...40,237,591
JBrowse link
G Galnt12 polypeptide N-acetylgalactosaminyltransferase 12 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:62,718,733...62,751,345
Ensembl chr 5:62,718,787...62,750,145
JBrowse link
G Galnt14 polypeptide N-acetylgalactosaminyltransferase 14 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 6:24,770,308...24,985,711
Ensembl chr 6:24,770,317...24,985,716
JBrowse link
G Galnt15 polypeptide N-acetylgalactosaminyltransferase 15 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr16:8,127,599...8,178,101
Ensembl chr16:8,128,689...8,177,841
JBrowse link
G Galnt5 polypeptide N-acetylgalactosaminyltransferase 5 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:44,025,964...44,072,073
Ensembl chr 3:44,025,300...44,074,678
JBrowse link
G Galnt6 polypeptide N-acetylgalactosaminyltransferase 6 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:142,322,172...142,364,281
Ensembl chr 7:142,322,172...142,352,382
JBrowse link
G Galnt9 polypeptide N-acetylgalactosaminyltransferase 9 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr12:52,106,506...52,187,205
Ensembl chr12:52,106,506...52,187,164
JBrowse link
G Galntl5 polypeptide N-acetylgalactosaminyltransferase-like 5 NOT ISO (PMID:24398516) RGD PMID:24398516 NCBI chr 4:6,333,049...6,450,137
Ensembl chr 4:6,333,050...6,449,949
JBrowse link
G Gcnt2 glucosaminyl (N-acetyl) transferase 2 (I blood group) ISO (PMID:12424189) RGD PMID:12424189 NCBI chr17:21,634,546...21,677,477
Ensembl chr17:21,634,551...21,739,408
JBrowse link
G Gcnt3 glucosaminyl (N-acetyl) transferase 3, mucin type IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 8:76,449,078...76,459,431
Ensembl chr 8:76,449,081...76,452,554
JBrowse link
G Ggta1l1 glycoprotein, alpha-galactosyltransferase 1-like 1 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:14,555,916...14,573,016
Ensembl chr 3:14,556,033...14,571,640
JBrowse link
G Golga2 golgin A2 ISO
ISS
(PMID:16489344)
GO_REF:0000024
RGD
UniProt
PMID:16489344 GO_REF:0000024 NCBI chr 3:11,317,328...11,337,569
Ensembl chr 3:11,317,183...11,336,458
JBrowse link
G Man1b1 mannosidase, alpha, class 1B, member 1 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:2,547,259...2,569,051
Ensembl chr 3:2,547,986...2,569,049
JBrowse link
G Man2a1 mannosidase, alpha, class 2A, member 1 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 9:112,293,388...112,451,677
Ensembl chr 9:112,293,388...112,451,677
JBrowse link
G Mgat1 alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:34,518,392...34,537,214
Ensembl chr10:34,519,790...34,537,210
JBrowse link
G Mpi mannose phosphate isomerase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:62,324,176...62,332,080
Ensembl chr 8:62,324,092...62,332,115
JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 ISO (PMID:10821832)
(MGI:5305553|PMID:22065762)
RGD PMID:10821832, PMID:22065762 MGI:5305553 NCBI chr18:3,616,878...3,662,656
Ensembl chr18:3,616,878...3,662,683
JBrowse link
G Nus1 NUS1 dehydrodolichyl diphosphate synthase subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:33,557,052...33,584,011
Ensembl chr20:33,557,052...33,584,010
JBrowse link
G Ostc oligosaccharyltransferase complex non-catalytic subunit IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:235,816,328...235,831,651
Ensembl chr 2:235,816,336...235,831,670
JBrowse link
G Psen1 presenilin 1 ISO MGI:2446469 (MGI:2662800|PMID:12646573) RGD PMID:12646573 MGI:2662800 NCBI chr 6:107,169,514...107,221,000
Ensembl chr 6:107,169,528...107,216,798
JBrowse link
G Rpn1 ribophorin I ISO (PMID:12887896) RGD PMID:12887896 NCBI chr 4:119,997,232...120,018,687
Ensembl chr 4:119,997,268...120,018,679
JBrowse link
G Rpn2 ribophorin II ISO (PMID:12887896) RGD PMID:12887896 NCBI chr 3:153,398,373...153,445,633
Ensembl chr 3:153,398,130...153,445,632
JBrowse link
G Sec1 secretory blood group 1 IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 1:101,663,205...101,677,016
Ensembl chr 1:101,663,205...101,664,436
JBrowse link
G Serp1 stress-associated endoplasmic reticulum protein 1 IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:10469658, PMID:21873635 RGD:633885, RGD:13792537 NCBI chr 2:148,718,279...148,722,263
Ensembl chr 2:148,718,280...148,722,263
JBrowse link
G Serp2 stress-associated endoplasmic reticulum protein family member 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:58,687,784...58,712,023
Ensembl chr15:58,687,786...58,711,872
JBrowse link
G St3gal1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 ISO MGI:2387752 (MGI:2386347|PMID:12068010), (MGI:62839|PMID:8375377) RGD PMID:8375377, PMID:12068010 MGI:2386347, MGI:62839 NCBI chr 7:107,895,045...107,963,158
Ensembl chr 7:107,895,045...107,963,142
JBrowse link
G St3gal2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 IDA
ISO
IEA
(MGI:893445|PMID:9184827)
GO_REF:0000041
GO_REF:0000107
(PMID:9266697)
RGD
UniProt
Ensembl
PMID:9184827, PMID:9266697, PMID:8144500 GO_REF:0000041, GO_REF:0000107, MGI:893445, RGD:68307 NCBI chr19:43,273,251...43,324,265
Ensembl chr19:43,274,493...43,290,363
JBrowse link
G St3gal3 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 IEA
ISO
IBA
GO_REF:0000107
(MGI:893445|PMID:9184827)
PMID:21873635
GO_REF:0000041
Ensembl
RGD
UniProt
PMID:9184827, PMID:21873635 GO_REF:0000041, GO_REF:0000107, MGI:893445, RGD:13792537 NCBI chr 5:136,765,309...136,965,642
Ensembl chr 5:136,766,208...136,965,191
JBrowse link
G St3gal4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 ISO
IBA
IEA
(PMID:8288606)
(MGI:893445|PMID:9184827)
PMID:21873635
GO_REF:0000041
RGD
UniProt
PMID:8288606, PMID:9184827, PMID:21873635 GO_REF:0000041, MGI:893445, RGD:13792537 NCBI chr 8:36,264,741...36,314,811
Ensembl chr 8:36,264,750...36,314,811
JBrowse link
G St3gal5 ST3 beta-galactoside alpha-2,3-sialyltransferase 5 IEA
IBA
GO_REF:0000002
PMID:21873635
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 4:99,937,499...99,999,905
Ensembl chr 4:99,937,558...99,999,902
JBrowse link
G St3gal6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 IEA
IBA
GO_REF:0000002
PMID:21873635
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr11:44,176,518...44,237,119
Ensembl chr11:44,192,940...44,237,100
JBrowse link
G St6gal1 ST6 beta-galactoside alpha-2,6-sialyltransferase 1 IEA
ISO
GO_REF:0000002
MGI:2387745 (MGI:2386347|PMID:12068010)
InterPro
RGD
PMID:12068010 GO_REF:0000002, MGI:2386347 NCBI chr11:80,927,601...80,981,424
Ensembl chr11:80,927,601...80,981,422
JBrowse link
G St6gal2 ST6 beta-galactoside alpha-2,6-sialyltransferase 2 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:6,966,291...7,060,499
Ensembl chr 9:6,966,908...7,053,387
JBrowse link
G St6galnac1 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:105,713,305...105,723,700
Ensembl chr10:105,713,317...105,723,700
JBrowse link
G St6galnac2 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 ISO (PMID:29251719) RGD PMID:29251719 NCBI chr10:105,650,866...105,668,579
Ensembl chr10:105,650,862...105,668,593
JBrowse link
G St6galnac3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 IDA
IEA
GO_REF:0000041
GO_REF:0000002
UniProt
InterPro
PMID:8631773 GO_REF:0000002, GO_REF:0000041, RGD:69997 NCBI chr 2:259,379,653...259,918,813
Ensembl chr 2:259,379,509...259,898,525
JBrowse link
G St6galnac4 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:11,607,103...11,619,595
Ensembl chr 3:11,607,225...11,619,593
JBrowse link
G St6galnac5 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:258,025,177...259,150,709
Ensembl chr 2:258,025,177...258,052,835
JBrowse link
G St6galnac6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:11,620,050...11,641,460
Ensembl chr 3:11,629,556...11,641,466
JBrowse link
G St8sia1 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:8806633, PMID:21873635 RGD:633965, RGD:13792537 NCBI chr 4:177,065,266...177,195,942
Ensembl chr 4:177,065,168...177,196,180
JBrowse link
G St8sia2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 ISO
IBA
IEA
(PMID:10766765)
PMID:21873635
GO_REF:0000041
RGD
UniProt
PMID:10766765, PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 1:135,336,374...135,406,699
Ensembl chr 1:135,336,374...135,406,700
JBrowse link
G St8sia3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 ISO
IBA
(PMID:10766765)
PMID:21873635
RGD PMID:10766765, PMID:21873635 RGD:13792537 NCBI chr18:59,748,766...59,755,257
Ensembl chr18:59,748,444...59,755,226
JBrowse link
G St8sia4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 ISO
IBA
(PMID:10766765)
PMID:21873635
RGD PMID:10766765, PMID:21873635 RGD:13792537 NCBI chr 9:103,117,705...103,207,154
Ensembl chr 9:103,117,506...103,207,190
JBrowse link
G St8sia5 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr18:73,564,010...73,630,256
Ensembl chr18:73,564,247...73,625,137
JBrowse link
G St8sia6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:80,960,785...81,002,830
Ensembl chr17:80,960,785...81,002,838
JBrowse link
G Trip11 thyroid hormone receptor interactor 11 ISO MGI:4829605 (MGI:4822550|PMID:20089971) RGD PMID:20089971 MGI:4822550 NCBI chr 6:125,741,520...125,812,926
Ensembl chr 6:125,742,796...125,812,517
JBrowse link
protein glycosylation in endoplasmic reticulum term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alg2 ALG2, alpha-1,3/1,6-mannosyltransferase ISO
IBA
UniProtKB:P43636 (PMID:12684507)
PMID:21873635
RGD PMID:12684507, PMID:21873635 RGD:13792537 NCBI chr 5:63,187,466...63,192,025
Ensembl chr 5:63,187,468...63,192,025
JBrowse link
G Aqp11 aquaporin 11 ISS
ISO
GO_REF:0000024
(MGI:5698795|PMID:24854278)
UniProt
RGD
PMID:24854278 GO_REF:0000024, MGI:5698795 NCBI chr 1:162,703,394...162,713,560
Ensembl chr 1:162,703,442...162,713,610
JBrowse link
protein glycosylation in Golgi term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fut8 fucosyltransferase 8 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:100,305,957...100,537,208
Ensembl chr 6:100,337,226...100,537,224
JBrowse link
G Lmf1 lipase maturation factor 1 ISO MGI:1856820 (MGI:82166|PMID:8694753) RGD PMID:8694753 MGI:82166 NCBI chr10:14,945,185...15,031,855
Ensembl chr10:14,945,265...15,031,942
JBrowse link
protein mannosylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpm1 dolichyl-phosphate mannosyltransferase subunit 1, catalytic ISO (PMID:9535917) RGD PMID:9535917 NCBI chr 3:164,966,637...164,986,180
Ensembl chr 3:164,966,637...164,986,180
JBrowse link
G Nus1 NUS1 dehydrodolichyl diphosphate synthase subunit ISO (MGI:5606245|PMID:25066056) RGD PMID:25066056 MGI:5606245 NCBI chr20:33,557,052...33,584,011
Ensembl chr20:33,557,052...33,584,010
JBrowse link
protein N-linked glycosylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07006258.2 IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 1:226,258,417...226,258,557 JBrowse link
G AABR07040624.1 IEA GO_REF:0000104 UniProt GO_REF:0000104 Ensembl chr  X:106,607,047...106,607,352 JBrowse link
G Alg10 ALG10, alpha-1,2-glucosyltransferase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:131,330,913...131,336,183
Ensembl chr 7:131,330,913...131,336,183
JBrowse link
G Alg11 ALG11, alpha-1,2-mannosyltransferase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:74,854,007...74,866,096
Ensembl chr16:74,857,562...74,864,816
JBrowse link
G Alg12 ALG12, alpha-1,6-mannosyltransferase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:129,798,663...129,812,677
Ensembl chr 7:129,798,663...129,812,388
JBrowse link
G Alg5 ALG5, dolichyl-phosphate beta-glucosyltransferase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:143,932,242...143,946,472
Ensembl chr 2:143,932,739...143,946,466
JBrowse link
G Alg6 ALG6, alpha-1,3-glucosyltransferase ISO
IBA
(PMID:10924277)
PMID:21873635
RGD PMID:10924277, PMID:21873635 RGD:13792537 NCBI chr 5:118,415,680...118,470,634
Ensembl chr 5:118,418,799...118,469,376
JBrowse link
G Alg8 ALG8, alpha-1,3-glucosyltransferase ISO
IBA
(PMID:12480927)
PMID:21873635
RGD PMID:12480927, PMID:21873635 RGD:13792537 NCBI chr 1:162,342,061...162,362,139
Ensembl chr 1:162,342,051...162,362,141
JBrowse link
G Alg9 ALG9, alpha-1,2-mannosyltransferase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:55,202,140...55,265,478
Ensembl chr 8:55,202,725...55,265,478
JBrowse link
G B4galt1 beta-1,4-galactosyltransferase 1 IEA
ISO
GO_REF:0000107
(PMID:16157350)
Ensembl
RGD
PMID:16157350 GO_REF:0000107 NCBI chr 5:57,121,768...57,168,610
Ensembl chr 5:57,121,769...57,168,610
JBrowse link
G B4galt7 beta-1,4-galactosyltransferase 7 ISO (PMID:24052259) RGD PMID:24052259 NCBI chr17:9,549,605...9,558,672
Ensembl chr17:9,550,028...9,558,634
JBrowse link
G Dad1 defender against cell death 1 ISO
IBA
(PMID:22467853)
PMID:21873635
RGD PMID:22467853, PMID:21873635 RGD:13792537 NCBI chr15:32,868,136...32,887,933
Ensembl chr15:32,868,087...32,888,095
JBrowse link
G Ddost dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit ISO (PMID:22467853), (PMID:9642163) RGD PMID:9642163, PMID:22467853 NCBI chr 5:156,668,924...156,676,036
Ensembl chr 5:156,668,712...156,676,035
JBrowse link
G Dolpp1 dolichyldiphosphatase 1 IBA
ISO
PMID:21873635
(MGI:3687897|PMID:12198133)
RGD PMID:12198133, PMID:21873635 MGI:3687897, RGD:13792537 NCBI chr 3:8,957,103...8,966,618
Ensembl chr 3:8,958,090...8,966,617
JBrowse link
G Dpagt1 dolichyl-phosphate N-acetylglucosaminephosphotransferase 1 ISO
IBA
(PMID:19549906)
PMID:21873635
RGD PMID:19549906, PMID:21873635 RGD:13792537 NCBI chr 8:48,657,779...48,664,531
Ensembl chr 8:48,657,795...48,664,860
JBrowse link
G Entpd5 ectonucleoside triphosphate diphosphohydrolase 5 ISS
ISO
GO_REF:0000024
(MGI:4881347|PMID:21074248)
UniProt
RGD
PMID:21074248 GO_REF:0000024, MGI:4881347 NCBI chr 6:108,087,677...108,123,811
Ensembl chr 6:108,087,418...108,120,579
JBrowse link
G Ext2 exostosin glycosyltransferase 2 ISO (MGI:3778322|PMID:18337501) RGD PMID:18337501 MGI:3778322 NCBI chr 3:82,602,784...82,734,557
Ensembl chr 3:82,602,785...82,734,533
JBrowse link
G Fut8 fucosyltransferase 8 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:100,305,957...100,537,208
Ensembl chr 6:100,337,226...100,537,224
JBrowse link
G Gfpt1 glutamine fructose-6-phosphate transaminase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:118,852,046...118,901,583
Ensembl chr 4:118,852,062...118,901,591
JBrowse link
G Gfpt2 glutamine-fructose-6-phosphate transaminase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:35,279,237...35,325,506
Ensembl chr10:35,279,236...35,325,508
JBrowse link
G Gorasp1 golgi reassembly stacking protein 1 IEA
ISO
GO_REF:0000107
MGI:5618686 (MGI:5574402|PMID:24795147)
Ensembl
RGD
PMID:24795147 GO_REF:0000107, MGI:5574402 NCBI chr 8:128,610,290...128,622,337
Ensembl chr 8:128,610,291...128,622,337
JBrowse link
G Krtcap2 keratinocyte associated protein 2 ISO (PMID:22467853) RGD PMID:22467853 NCBI chr 2:188,561,548...188,565,544
Ensembl chr 2:188,561,429...188,565,544
JBrowse link
G LOC103692171 mannosyl-oligosaccharide glucosidase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:114,813,988...114,817,463
Ensembl chr 4:114,814,056...114,817,465
JBrowse link
G LOC289035 similar to UDP-N-acetylglucosamine:a-1,3-D-mannoside beta-1,4-N-acetylgluco IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:51,218,428...51,225,602
Ensembl chr13:51,218,468...51,223,952
JBrowse link
G Magt1 magnesium transporter 1 IEA
ISO
GO_REF:0000002
(PMID:31036665)
InterPro
RGD
PMID:31036665 GO_REF:0000002 NCBI chr  X:77,023,423...77,061,603
Ensembl chr  X:77,020,402...77,061,667
JBrowse link
G Mgat1 alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:34,518,392...34,537,214
Ensembl chr10:34,519,790...34,537,210
JBrowse link
G Mgat2 alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:2952645, PMID:21873635 RGD:1599934, RGD:13792537 NCBI chr 6:91,476,698...91,479,187
Ensembl chr 6:91,476,698...91,479,183
JBrowse link
G Mgat3 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase ISS
ISO
GO_REF:0000024
MGI:1857830 (MGI:5751042|PMID:25592972), (MGI:5816436|PMID:26467158)
UniProt
RGD
PMID:25592972, PMID:26467158 GO_REF:0000024, MGI:5751042, MGI:5816436 NCBI chr 7:121,394,541...121,436,935
Ensembl chr 7:121,408,829...121,435,022
JBrowse link
G Mgat4a alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A IEA
ISO
IBA
GO_REF:0000107
MGI:2143974 (MGI:5578594|PMID:20015870)
PMID:21873635
Ensembl
RGD
PMID:20015870, PMID:21873635 GO_REF:0000107, MGI:5578594, RGD:13792537 NCBI chr 9:44,033,433...44,126,946
Ensembl chr 9:44,033,436...44,126,919
JBrowse link
G Mgat4b alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B IBA
ISO
PMID:21873635
MGI:2662992 (MGI:5578594|PMID:20015870)
RGD PMID:20015870, PMID:21873635 MGI:5578594, RGD:13792537 NCBI chr10:35,726,501...35,736,338
Ensembl chr10:35,726,544...35,736,338
JBrowse link
G Mgat4c MGAT4 family, member C IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:43,249,369...44,024,278
Ensembl chr 7:44,009,069...44,024,456
JBrowse link
G Mgat4d MGAT4 family, member D IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:24,494,366...24,534,039
Ensembl chr19:24,496,569...24,532,772
JBrowse link
G Mgat4e MGAT4 family, member E IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:51,364,803...51,382,702
Ensembl chr13:51,364,014...51,373,399
JBrowse link
G Mgat5 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase ISO
IBA
(PMID:24846175)
(MGI:2683380|PMID:14561752), (MGI:3663843|PMID:16413118)
PMID:21873635
RGD PMID:14561752, PMID:16413118, PMID:24846175, PMID:21873635 MGI:2683380, MGI:3663843, RGD:13792537 NCBI chr13:43,850,744...44,157,860
Ensembl chr13:43,850,751...44,157,924
JBrowse link
G Mgat5b alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B IBA
ISO
PMID:21873635
(MGI:3663843|PMID:16413118)
RGD PMID:16413118, PMID:21873635 MGI:3663843, RGD:13792537 NCBI chr10:105,861,734...105,932,048
Ensembl chr10:105,861,743...105,932,042
JBrowse link
G Mogs mannosyl-oligosaccharide glucosidase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:113,948,328...113,951,731
Ensembl chr 4:113,948,514...113,951,847
JBrowse link
G Pgm3 phosphoglucomutase 3 ISO (PMID:24589341) RGD PMID:24589341 NCBI chr 8:94,225,513...94,243,230
Ensembl chr 8:94,225,515...94,243,215
JBrowse link
G Pmm1 phosphomannomutase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:123,183,504...123,193,874
Ensembl chr 7:123,183,506...123,193,761
JBrowse link
G Pmm2 phosphomannomutase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:7,056,258...7,077,443
Ensembl chr10:7,056,266...7,077,443
JBrowse link
G Rpn1 ribophorin I ISO (PMID:9642163) RGD PMID:9642163 NCBI chr 4:119,997,232...120,018,687
Ensembl chr 4:119,997,268...120,018,679
JBrowse link
G Rpn2 ribophorin II IEA
ISO
IBA
GO_REF:0000104
(MGI:3820787|PMID:18724378)
PMID:21873635
(PMID:9642163)
UniProt
RGD
PMID:9642163, PMID:18724378, PMID:21873635 GO_REF:0000104, MGI:3820787, RGD:13792537 NCBI chr 3:153,398,373...153,445,633
Ensembl chr 3:153,398,130...153,445,632
JBrowse link
G Slc39a8 solute carrier family 39 member 8 ISS
ISO
GO_REF:0000024
(MGI:5912781|PMID:28481222)
UniProt
RGD
PMID:28481222 GO_REF:0000024, MGI:5912781 NCBI chr 2:241,028,851...241,092,584
Ensembl chr 2:241,029,693...241,092,582
JBrowse link
G St3gal1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 ISO (PMID:19820709) RGD PMID:19820709 NCBI chr 7:107,895,045...107,963,158
Ensembl chr 7:107,895,045...107,963,142
JBrowse link
G Stt3a STT3 oligosaccharyltransferase complex catalytic subunit A ISO (PMID:22467853) RGD PMID:22467853 NCBI chr 8:39,204,218...39,243,751
Ensembl chr 8:39,181,163...39,243,882
JBrowse link
G Stt3b STT3 oligosaccharyltransferase complex catalytic subunit B ISO (PMID:22467853) RGD PMID:22467853 NCBI chr 8:123,303,910...123,370,729
Ensembl chr 8:123,293,057...123,371,257
JBrowse link
G Tmem165 transmembrane protein 165 ISO
ISS
(PMID:22683087)
GO_REF:0000024
RGD
UniProt
PMID:22683087 GO_REF:0000024 NCBI chr14:34,503,037...34,528,262
Ensembl chr14:34,503,038...34,528,262
JBrowse link
G Tmem258 transmembrane protein 258 ISO (PMID:26472760) RGD PMID:26472760 NCBI chr 1:226,256,142...226,260,006 JBrowse link
G Tmem258b transmembrane protein 258 B IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 9:61,552,336...61,552,716
Ensembl chr 9:61,552,374...61,552,613
JBrowse link
protein N-linked glycosylation via arginine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Krtcap2 keratinocyte associated protein 2 ISO
IBA
(PMID:22467853)
PMID:21873635
RGD PMID:22467853, PMID:21873635 RGD:13792537 NCBI chr 2:188,561,548...188,565,544
Ensembl chr 2:188,561,429...188,565,544
JBrowse link
protein N-linked glycosylation via asparagine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alg8 ALG8, alpha-1,3-glucosyltransferase ISO (MGI:6274952|PMID:28375157) RGD PMID:28375157 MGI:6274952 NCBI chr 1:162,342,061...162,362,139
Ensembl chr 1:162,342,051...162,362,141
JBrowse link
G Ddost dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:156,668,924...156,676,036
Ensembl chr 5:156,668,712...156,676,035
JBrowse link
G Derl3 derlin 3 ISO (PMID:22607976) RGD PMID:22607976 NCBI chr20:13,692,102...13,707,645
Ensembl chr20:13,704,314...13,706,205
JBrowse link
G Fut8 fucosyltransferase 8 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:17172260)
Ensembl
UniProt
RGD
PMID:17172260 GO_REF:0000024, GO_REF:0000107 NCBI chr 6:100,305,957...100,537,208
Ensembl chr 6:100,337,226...100,537,224
JBrowse link
G Magt1 magnesium transporter 1 ISO
IBA
(PMID:25135935)
PMID:21873635
RGD PMID:25135935, PMID:21873635 RGD:13792537 NCBI chr  X:77,023,423...77,061,603
Ensembl chr  X:77,020,402...77,061,667
JBrowse link
G Mgat1 alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase ISO (PMID:1702225) RGD PMID:1702225 NCBI chr10:34,518,392...34,537,214
Ensembl chr10:34,519,790...34,537,210
JBrowse link
G Mgat2 alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase ISS
ISO
GO_REF:0000024
MGI:2667740 (MGI:2429810|PMID:12417412)
(PMID:29666272), (PMID:7635144), (PMID:8808595)
UniProt
RGD
PMID:7635144, PMID:8808595, PMID:12417412, PMID:29666272 GO_REF:0000024, MGI:2429810 NCBI chr 6:91,476,698...91,479,187
Ensembl chr 6:91,476,698...91,479,183
JBrowse link
G Mgat5 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase ISS
ISO
GO_REF:0000024
(PMID:10395745), (PMID:30140003)
UniProt
RGD
PMID:10395745, PMID:30140003 GO_REF:0000024 NCBI chr13:43,850,744...44,157,860
Ensembl chr13:43,850,751...44,157,924
JBrowse link
G Ost4 oligosaccharyltransferase complex subunit 4, non-catalytic ISO
IBA
(PMID:23606741)
PMID:21873635
RGD PMID:23606741, PMID:21873635 RGD:13792537 NCBI chr 6:26,836,216...26,837,440
Ensembl chr 6:26,836,216...26,837,440
JBrowse link
G Rpn1 ribophorin I IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:17264154)
Ensembl
RGD
PMID:17264154, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 4:119,997,232...120,018,687
Ensembl chr 4:119,997,268...120,018,679
JBrowse link
G St6gal1 ST6 beta-galactoside alpha-2,6-sialyltransferase 1 IEA
ISO
ISS
GO_REF:0000107
(MGI:6213409|PMID:22039275)
GO_REF:0000024
(PMID:23999306)
Ensembl
RGD
UniProt
PMID:22039275, PMID:23999306 GO_REF:0000024, GO_REF:0000107, MGI:6213409 NCBI chr11:80,927,601...80,981,424
Ensembl chr11:80,927,601...80,981,422
JBrowse link
G Stt3a STT3 oligosaccharyltransferase complex catalytic subunit A ISO
ISS
(PMID:19167329)
(PMID:12887896)
GO_REF:0000024
RGD
UniProt
PMID:12887896, PMID:19167329 GO_REF:0000024 NCBI chr 8:39,204,218...39,243,751
Ensembl chr 8:39,181,163...39,243,882
JBrowse link
G Stt3b STT3 oligosaccharyltransferase complex catalytic subunit B ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:12887896)
(PMID:19167329), (PMID:22607976)
UniProt
RGD
PMID:12887896, PMID:19167329, PMID:22607976, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 8:123,303,910...123,370,729
Ensembl chr 8:123,293,057...123,371,257
JBrowse link
G Tusc3 tumor suppressor candidate 3 ISO
IBA
ISS
(PMID:26864433)
PMID:21873635
(PMID:12887896)
GO_REF:0000024
RGD
UniProt
PMID:12887896, PMID:26864433, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr16:56,248,125...56,396,491
Ensembl chr16:56,247,659...56,396,502
JBrowse link
G Ube2j1 ubiquitin-conjugating enzyme E2, J1 ISO (PMID:22607976) RGD PMID:22607976 NCBI chr 5:48,274,387...48,292,699
Ensembl chr 5:48,274,477...48,290,658
JBrowse link
G Uggt1 UDP-glucose glycoprotein glucosyltransferase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:42,692,156...42,805,680
Ensembl chr 9:42,692,105...42,805,673
JBrowse link
protein O-GlcNAcylation via threonine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eogt EGF domain specific O-linked N-acetylglucosamine transferase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:129,477,779...129,515,435
Ensembl chr 4:129,477,807...129,515,435
JBrowse link
protein O-linked fucosylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pofut1 protein O-fucosyltransferase 1 ISO (PMID:15653671) RGD PMID:15653671 NCBI chr 3:148,722,864...148,749,743
Ensembl chr 3:148,722,955...148,747,208
JBrowse link
G Pofut2 protein O-fucosyltransferase 2 ISO (PMID:22588082) RGD PMID:22588082 NCBI chr20:12,117,811...12,128,747
Ensembl chr20:12,117,811...12,128,747
JBrowse link
G Slc35c1 solute carrier family 35 member C1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:81,361,080...81,369,010
Ensembl chr 3:81,361,056...81,368,442
JBrowse link
G Slc35c2 solute carrier family 35 member C2 ISO (MGI:4849897|PMID:20837470) RGD PMID:20837470 MGI:4849897 NCBI chr 3:161,801,194...161,812,318
Ensembl chr 3:161,801,197...161,812,291
JBrowse link
protein O-linked glycosylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A4gnt alpha-1,4-N-acetylglucosaminyltransferase IBA
ISO
PMID:21873635
MGI:5425954 (MGI:5424091|PMID:22307328)
RGD PMID:22307328, PMID:21873635 MGI:5424091, RGD:13792537 NCBI chr 8:107,856,853...107,866,438
Ensembl chr 8:107,859,366...107,865,789
JBrowse link
G B3galnt2 beta-1,3-N-acetylgalactosaminyltransferase 2 ISO (PMID:23929950) RGD PMID:23929950 NCBI chr17:54,027,859...54,070,399
Ensembl chr17:54,027,859...54,070,399
JBrowse link
G C1galt1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1 ISO MGI:3714051 (MGI:5002772|PMID:21383503) RGD PMID:21383503 MGI:5002772 NCBI chr 4:33,890,353...33,943,219
Ensembl chr 4:33,890,349...33,943,211
JBrowse link
G C1galt1c1 C1GALT1-specific chaperone 1 ISO (PMID:21383503)
MGI:4459539|MGI:4459541 (MGI:4454199|PMID:20439703), (MGI:5448092|PMID:22988088)
RGD PMID:20439703, PMID:21383503, PMID:22988088 MGI:4454199, MGI:5448092 NCBI chr  X:124,921,686...124,926,171
Ensembl chr  X:124,921,728...124,926,171
JBrowse link
G Eogt EGF domain specific O-linked N-acetylglucosamine transferase IEA
ISO
ISS
GO_REF:0000107
(MGI:5311506|PMID:22310717)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:22310717 GO_REF:0000024, GO_REF:0000107, MGI:5311506 NCBI chr 4:129,477,779...129,515,435
Ensembl chr 4:129,477,807...129,515,435
JBrowse link
G Fktn fukutin ISO (PMID:17034757) RGD PMID:17034757 NCBI chr 5:70,522,001...70,578,270
Ensembl chr 5:70,528,688...70,578,273
JBrowse link
G Galnt1 polypeptide N-acetylgalactosaminyltransferase 1 TAS
ISO
ISS
(MGI:2157773|PMID:11278534), (MGI:2676507|PMID:12407114)
GO_REF:0000024
(PMID:22186971)
RGD
UniProt
PMID:11278534, PMID:12407114, PMID:22186971, PMID:12364335 GO_REF:0000024, MGI:2157773, MGI:2676507, RGD:727444 NCBI chr18:16,141,062...16,187,271
Ensembl chr18:16,146,447...16,185,496
JBrowse link
G Galnt10 polypeptide N-acetylgalactosaminyltransferase 10 ISO (PMID:12417297)
(MGI:2157773|PMID:11278534)
RGD PMID:11278534, PMID:12417297 MGI:2157773 NCBI chr10:43,067,316...43,208,992
Ensembl chr10:43,067,299...43,210,427
JBrowse link
G Galnt13 polypeptide N-acetylgalactosaminyltransferase 13 ISO (MGI:2676507|PMID:12407114) RGD PMID:12407114 MGI:2676507 NCBI chr 3:39,967,056...40,625,144
Ensembl chr 3:40,038,336...40,624,530
JBrowse link
G Galnt18 polypeptide N-acetylgalactosaminyltransferase 18 ISO (PMID:22186971) RGD PMID:22186971 NCBI chr 1:176,296,186...176,607,466
Ensembl chr 1:176,296,193...176,607,466
JBrowse link
G Galnt2 polypeptide N-acetylgalactosaminyltransferase 2 ISO (PMID:16434399), (PMID:19460755) RGD PMID:16434399, PMID:19460755 NCBI chr19:57,043,858...57,115,123
Ensembl chr19:57,047,830...57,115,132
JBrowse link
G Galnt7 polypeptide N-acetylgalactosaminyltransferase 7 ISO (MGI:2157773|PMID:11278534) RGD PMID:11278534 MGI:2157773 NCBI chr16:35,935,059...36,062,734
Ensembl chr16:35,934,970...36,062,719
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase IDA
ISO
IBA
IEA
IMP
(MGI:3761912|PMID:17670746), (MGI:5529604|PMID:23777819)
(PMID:21240259), (PMID:21285374), (PMID:22923583), (PMID:23222540), (PMID:23352454), (PMID:23353889), (PMID:24474760), (PMID:30699359)
PMID:21873635
GO_REF:0000002
GO_REF:0000107
RGD
InterPro
Ensembl
PMID:17670746, PMID:21240259, PMID:21285374, PMID:22923583, PMID:23222540, PMID:23352454, PMID:23353889, PMID:23777819, PMID:24474760, PMID:30699359, PMID:9083067, PMID:21873635, PMID:24995978, PMID:10542233 GO_REF:0000002, GO_REF:0000107, MGI:3761912, MGI:5529604, RGD:61681, RGD:13792537, RGD:9590184, RGD:2311647 NCBI chr  X:71,540,870...71,585,906
Ensembl chr  X:71,528,988...71,585,908
JBrowse link
G Pgm3 phosphoglucomutase 3 ISO (PMID:24589341) RGD PMID:24589341 NCBI chr 8:94,225,513...94,243,230
Ensembl chr 8:94,225,515...94,243,215
JBrowse link
G Plod1 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 NOT ISO (PMID:10934207) RGD PMID:10934207 NCBI chr 5:164,720,629...164,747,071
Ensembl chr 5:164,720,587...164,747,083
JBrowse link
G Plod2 procollagen lysine, 2-oxoglutarate 5-dioxygenase 2 NOT ISO (PMID:10934207) RGD PMID:10934207 NCBI chr 8:99,977,334...100,059,736
Ensembl chr 8:99,977,334...100,059,736
JBrowse link
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 ISO (PMID:10934207) RGD PMID:10934207 NCBI chr12:22,716,421...22,726,982
Ensembl chr12:22,716,423...22,726,982
JBrowse link
G Pofut1 protein O-fucosyltransferase 1 ISS
ISO
GO_REF:0000024
(PMID:11524432), (PMID:9023546)
UniProt
RGD
PMID:9023546, PMID:11524432 GO_REF:0000024 NCBI chr 3:148,722,864...148,749,743
Ensembl chr 3:148,722,955...148,747,208
JBrowse link
G Poglut1 protein O-glucosyltransferase 1 ISO
IBA
(PMID:21949356)
MGI:3942939 (MGI:4949954|PMID:21490058)
PMID:21873635
RGD PMID:21490058, PMID:21949356, PMID:21873635 MGI:4949954, RGD:13792537 NCBI chr11:64,761,493...64,788,210
Ensembl chr11:64,761,146...64,788,208
JBrowse link
G Pomgnt1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) ISS
ISO
IBA
GO_REF:0000024
MGI:3623521 (MGI:3621684|PMID:16458488)
PMID:21873635
(PMID:11709191), (PMID:26908613), (PMID:27391550)
UniProt
RGD
PMID:11709191, PMID:16458488, PMID:26908613, PMID:27391550, PMID:21873635 GO_REF:0000024, MGI:3621684, RGD:13792537 NCBI chr 5:135,007,343...135,017,220
Ensembl chr 5:135,007,343...135,017,218
JBrowse link
G Pomgnt2 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) ISS
ISO
GO_REF:0000024
(PMID:23929950), (PMID:27066570)
UniProt
RGD
PMID:23929950, PMID:27066570 GO_REF:0000024 NCBI chr 8:130,615,482...130,631,144
Ensembl chr 8:130,615,711...130,617,833
JBrowse link
G Pomk protein-O-mannose kinase ISO
IBA
ISS
(PMID:23929950)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:23929950, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr16:70,854,825...70,869,653
Ensembl chr16:70,859,280...70,869,634
JBrowse link
G St6galnac2 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 ISO (PMID:10742600) RGD PMID:10742600 NCBI chr10:105,650,866...105,668,579
Ensembl chr10:105,650,862...105,668,593
JBrowse link
G St8sia6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 ISO (MGI:2182536|PMID:11980897) RGD PMID:11980897 MGI:2182536 NCBI chr17:80,960,785...81,002,830
Ensembl chr17:80,960,785...81,002,838
JBrowse link
G Tet1 tet methylcytosine dioxygenase 1 ISO (MGI:5487471|PMID:23352454) RGD PMID:23352454 MGI:5487471 NCBI chr20:27,359,122...27,438,039
Ensembl chr20:27,366,213...27,437,427
JBrowse link
G Tet2 tet methylcytosine dioxygenase 2 ISO (PMID:23222540), (PMID:23353889)
(MGI:5473922|PMID:23353889)
RGD PMID:23222540, PMID:23353889 MGI:5473922 NCBI chr 2:238,719,389...238,802,975
Ensembl chr 2:238,720,835...238,803,024
JBrowse link
G Tet3 tet methylcytosine dioxygenase 3 ISO (PMID:23353889) RGD PMID:23353889 NCBI chr 4:115,060,702...115,160,800
Ensembl chr 4:115,066,309...115,157,263
JBrowse link
G Trak2 trafficking kinesin protein 2 IDA PMID:12435728 UniProt PMID:12435728 RGD:632248 NCBI chr 9:65,698,706...65,763,351
Ensembl chr 9:65,698,712...65,763,273
JBrowse link
G Vegfb vascular endothelial growth factor B ISO (MGI:82283|PMID:8702615) RGD PMID:8702615 MGI:82283 NCBI chr 1:222,237,000...222,242,786
Ensembl chr 1:222,239,022...222,242,644
JBrowse link
protein O-linked glycosylation via serine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Galnt1 polypeptide N-acetylgalactosaminyltransferase 1 ISO (PMID:9295285) RGD PMID:9295285 NCBI chr18:16,141,062...16,187,271
Ensembl chr18:16,146,447...16,185,496
JBrowse link
G Galnt13 polypeptide N-acetylgalactosaminyltransferase 13 ISO (PMID:22186971) RGD PMID:22186971 NCBI chr 3:39,967,056...40,625,144
Ensembl chr 3:40,038,336...40,624,530
JBrowse link
G Galnt16 polypeptide N-acetylgalactosaminyltransferase 16 ISO (PMID:22186971) RGD PMID:22186971 NCBI chr 6:104,069,853...104,250,177
Ensembl chr 6:104,068,547...104,250,174
JBrowse link
G Galnt2 polypeptide N-acetylgalactosaminyltransferase 2 ISO (PMID:12438318), (PMID:9295285) RGD PMID:9295285, PMID:12438318 NCBI chr19:57,043,858...57,115,123
Ensembl chr19:57,047,830...57,115,132
JBrowse link
G Galnt3 polypeptide N-acetylgalactosaminyltransferase 3 ISO (PMID:9295285) RGD PMID:9295285 NCBI chr 3:52,174,469...52,212,395
Ensembl chr 3:52,175,547...52,212,412
JBrowse link
G Galnt4 polypeptide N-acetylgalactosaminyltransferase 4 ISO (PMID:9804815) RGD PMID:9804815 NCBI chr 7:41,305,437...41,309,621 JBrowse link
G Mgat5b alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B ISO (PMID:19846580) RGD PMID:19846580 NCBI chr10:105,861,734...105,932,048
Ensembl chr10:105,861,743...105,932,042
JBrowse link
G Poglut1 protein O-glucosyltransferase 1 IEA
ISO
ISS
GO_REF:0000107
(MGI:5700252|PMID:26496195)
(PMID:27807076), (PMID:30127001)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:26496195, PMID:27807076, PMID:30127001 GO_REF:0000024, GO_REF:0000107, MGI:5700252 NCBI chr11:64,761,493...64,788,210
Ensembl chr11:64,761,146...64,788,208
JBrowse link
G Poglut2 protein O-glucosyltransferase 2 ISO (PMID:30127001) RGD PMID:30127001 NCBI chr 9:50,872,492...50,884,596
Ensembl chr 9:50,872,492...50,884,596
JBrowse link
G Poglut3 protein O-glucosyltransferase 3 ISO
ISS
(PMID:30127001)
GO_REF:0000024
RGD
UniProt
PMID:30127001 GO_REF:0000024 NCBI chr 8:57,964,988...57,982,605
Ensembl chr 8:57,964,988...57,982,600
JBrowse link
protein O-linked glycosylation via threonine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Galnt1 polypeptide N-acetylgalactosaminyltransferase 1 ISO (PMID:9295285) RGD PMID:9295285 NCBI chr18:16,141,062...16,187,271
Ensembl chr18:16,146,447...16,185,496
JBrowse link
G Galnt11 polypeptide N-acetylgalactosaminyltransferase 11 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:24226769)
Ensembl
UniProt
RGD
PMID:24226769 GO_REF:0000024, GO_REF:0000107 NCBI chr 4:6,297,255...6,330,765
Ensembl chr 4:6,297,258...6,330,765
JBrowse link
G Galnt13 polypeptide N-acetylgalactosaminyltransferase 13 ISO (PMID:22186971) RGD PMID:22186971 NCBI chr 3:39,967,056...40,625,144
Ensembl chr 3:40,038,336...40,624,530
JBrowse link
G Galnt16 polypeptide N-acetylgalactosaminyltransferase 16 ISO (PMID:22186971) RGD PMID:22186971 NCBI chr 6:104,069,853...104,250,177
Ensembl chr 6:104,068,547...104,250,174
JBrowse link
G Galnt2 polypeptide N-acetylgalactosaminyltransferase 2 ISO (PMID:12438318), (PMID:18562306), (PMID:9295285) RGD PMID:9295285, PMID:12438318, PMID:18562306 NCBI chr19:57,043,858...57,115,123
Ensembl chr19:57,047,830...57,115,132
JBrowse link
G Galnt3 polypeptide N-acetylgalactosaminyltransferase 3 ISO (PMID:16638743), (PMID:9295285) RGD PMID:9295285, PMID:16638743 NCBI chr 3:52,174,469...52,212,395
Ensembl chr 3:52,175,547...52,212,412
JBrowse link
G Galnt4 polypeptide N-acetylgalactosaminyltransferase 4 ISO (PMID:29208955), (PMID:9804815) RGD PMID:9804815, PMID:29208955 NCBI chr 7:41,305,437...41,309,621 JBrowse link
G Galntl6 polypeptide N-acetylgalactosaminyltransferase-like 6 ISO (PMID:22186971) RGD PMID:22186971 NCBI chr16:34,551,052...35,803,840
Ensembl chr16:35,573,058...35,802,979
JBrowse link
protein O-linked mannosylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4gat1 beta-1,4-glucuronyltransferase 1 ISO (PMID:25279697), (PMID:25279699) RGD PMID:25279697, PMID:25279699 NCBI chr 1:220,322,854...220,325,076
Ensembl chr 1:220,416,018...220,418,240
JBrowse link
G Crppa CDP-L-ribitol pyrophosphorylase A ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:22522420), (PMID:22522421)
UniProt
RGD
PMID:22522420, PMID:22522421, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 6:55,880,136...56,159,466
Ensembl chr 6:55,881,387...56,159,464
JBrowse link
G Dpm1 dolichyl-phosphate mannosyltransferase subunit 1, catalytic ISO
IBA
(PMID:9535917)
PMID:21873635
RGD PMID:9535917, PMID:21873635 RGD:13792537 NCBI chr 3:164,966,637...164,986,180
Ensembl chr 3:164,966,637...164,986,180
JBrowse link
G Fkrp fukutin related protein ISO
IBA
(PMID:25279699)
PMID:21873635
RGD PMID:25279699, PMID:21873635 RGD:13792537 NCBI chr 1:78,733,461...78,740,803
Ensembl chr 1:78,733,508...78,739,107
JBrowse link
G Fktn fukutin ISO (PMID:25279699) RGD PMID:25279699 NCBI chr 5:70,522,001...70,578,270
Ensembl chr 5:70,528,688...70,578,273
JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 ISO
IBA
(PMID:22223806), (PMID:25138275), (PMID:25279697), (PMID:25279699)
(MGI:5607212|PMID:23135544), (MGI:5607213|PMID:23125099)
PMID:21873635
RGD PMID:22223806, PMID:23125099, PMID:23135544, PMID:25138275, PMID:25279697, PMID:25279699, PMID:21873635 MGI:5607212, MGI:5607213, RGD:13792537 NCBI chr19:12,481,563...12,945,320
Ensembl chr19:12,481,540...12,942,963
JBrowse link
G Large2 LARGE xylosyl- and glucuronyltransferase 2 ISO
IBA
ISS
(PMID:25138275)
(MGI:5607212|PMID:23135544), (MGI:5607213|PMID:23125099)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:23125099, PMID:23135544, PMID:25138275, PMID:21873635 GO_REF:0000024, MGI:5607212, MGI:5607213, RGD:13792537 NCBI chr 3:81,276,020...81,285,457
Ensembl chr 3:81,276,028...81,282,157
JBrowse link
G Pomgnt2 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) ISS
ISO
IBA
GO_REF:0000024
(MGI:5607394|PMID:24256719)
PMID:21873635
UniProt
RGD
PMID:24256719, PMID:21873635 GO_REF:0000024, MGI:5607394, RGD:13792537 NCBI chr 8:130,615,482...130,631,144
Ensembl chr 8:130,615,711...130,617,833
JBrowse link
G Pomt1 protein-O-mannosyltransferase 1 ISS
IEA
IBA
ISO
GO_REF:0000024
GO_REF:0000108
PMID:21873635
(PMID:28512129)
UniProt
GOC
RGD
PMID:28512129, PMID:21873635 GO_REF:0000024, GO_REF:0000108, RGD:13792537 NCBI chr 3:11,253,424...11,271,873
Ensembl chr 3:11,254,026...11,271,872
JBrowse link
G Pomt2 protein-O-mannosyltransferase 2 ISO
IBA
(PMID:28512129)
PMID:21873635
RGD PMID:28512129, PMID:21873635 RGD:13792537 NCBI chr 6:111,137,329...111,176,991
Ensembl chr 6:111,135,349...111,176,918
JBrowse link
G Rxylt1 ribitol xylosyltransferase 1 ISO
IBA
(PMID:25279699), (PMID:27130732), (PMID:27733679)
PMID:21873635
RGD PMID:25279699, PMID:27130732, PMID:27733679, PMID:21873635 RGD:13792537 NCBI chr 7:64,329,341...64,341,201
Ensembl chr 7:64,326,465...64,341,207
JBrowse link
G Sdf2 stromal cell derived factor 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:65,507,364...65,517,839
Ensembl chr10:65,507,364...65,517,838
JBrowse link
G Sdf2l1 stromal cell-derived factor 2-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:88,122,271...88,124,513
Ensembl chr11:88,122,271...88,124,513
JBrowse link
G Tmtc1 transmembrane O-mannosyltransferase targeting cadherins 1 ISO (PMID:28973932) RGD PMID:28973932 NCBI chr 4:182,620,132...182,845,620
Ensembl chr 4:182,625,386...182,844,291
JBrowse link
G Tmtc2 transmembrane O-mannosyltransferase targeting cadherins 2 ISO (PMID:28973932) RGD PMID:28973932 NCBI chr 7:47,179,596...47,586,777
Ensembl chr 7:47,181,981...47,586,137
JBrowse link
G Tmtc3 transmembrane O-mannosyltransferase targeting cadherins 3 ISO (PMID:28973932) RGD PMID:28973932 NCBI chr 7:40,171,957...40,217,056
Ensembl chr 7:40,171,963...40,217,056
JBrowse link
G Tmtc4 transmembrane O-mannosyltransferase targeting cadherins 4 ISO (PMID:28973932) RGD PMID:28973932 NCBI chr15:109,338,762...109,394,905
Ensembl chr15:109,339,564...109,394,927
JBrowse link
proteoglycan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acan aggrecan IEA
ISO
GO_REF:0000107
MGI:1856465 (MGI:2664273|PMID:3070812)
Ensembl
RGD
PMID:3070812 GO_REF:0000107, MGI:2664273 NCBI chr 1:140,762,758...140,824,441
Ensembl chr 1:140,762,758...140,824,441
JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 9:66,568,074...66,683,019
Ensembl chr 9:66,568,074...66,676,494
JBrowse link
G Cant1 calcium activated nucleotidase 1 ISO
IBA
ISS
(PMID:22539336)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:22539336, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:107,432,500...107,445,634
Ensembl chr10:107,432,506...107,445,522
JBrowse link
G Chst10 carbohydrate sulfotransferase 10 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:45,528,928...45,559,365
Ensembl chr 9:45,528,928...45,559,140
JBrowse link
G Chst11 carbohydrate sulfotransferase 11 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:26,641,856...26,890,503
Ensembl chr 7:26,645,422...26,859,716
JBrowse link
G Chst12 carbohydrate sulfotransferase 12 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:16,199,975...16,218,404
Ensembl chr12:16,200,019...16,201,632
JBrowse link
G Chst13 carbohydrate sulfotransferase 13 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:122,223,846...122,244,848
Ensembl chr 4:122,224,535...122,237,754
JBrowse link
G Chst8 carbohydrate sulfotransferase 8 ISO
IBA
(PMID:10988300)
(MGI:1928003|PMID:10988300)
PMID:21873635
RGD PMID:10988300, PMID:21873635 MGI:1928003, RGD:13792537 NCBI chr 1:90,542,095...90,685,257
Ensembl chr 1:90,542,096...90,685,257
JBrowse link
G Chst9 carbohydrate sulfotransferase 9 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:6,833,408...7,115,815
Ensembl chr18:6,834,365...7,081,356
JBrowse link
G Csgalnact2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 ISO (PMID:11788602) RGD PMID:11788602 NCBI chr 4:150,148,626...150,185,062
Ensembl chr 4:150,153,844...150,185,044
JBrowse link
G Ext1 exostosin glycosyltransferase 1 ISO (MGI:4946896|PMID:21185280) RGD PMID:21185280 MGI:4946896 NCBI chr 7:92,605,008...92,881,392
Ensembl chr 7:92,605,728...92,882,068
JBrowse link
G Fam20b FAM20B, glycosaminoglycan xylosylkinase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:74,280,173...74,333,463
Ensembl chr13:74,280,173...74,331,214
JBrowse link
G Foxl1 forkhead box L1 ISO MGI:2178230 (MGI:2153304|PMID:11555641) RGD PMID:11555641 MGI:2153304 NCBI chr19:53,054,887...53,058,624
Ensembl chr19:53,055,745...53,056,770
JBrowse link
G Igf1 insulin-like growth factor 1 ISO
IEA
(PMID:12746903), (PMID:9564845)
GO_REF:0000107
RGD
Ensembl
PMID:9564845, PMID:12746903 GO_REF:0000107 NCBI chr 7:28,412,123...28,491,815
Ensembl chr 7:28,412,198...28,486,609
JBrowse link
G Xylt1 xylosyltransferase 1 IMP
ISO
ISS
(PMID:11087729)
GO_REF:0000024
RGD
UniProt
PMID:11087729, PMID:19001053 GO_REF:0000024, RGD:2313142 NCBI chr 1:186,939,698...187,264,758
Ensembl chr 1:187,149,453...187,261,632
JBrowse link
G Xylt2 xylosyltransferase 2 ISO MGI:3714171 (MGI:3713963|PMID:17517600) RGD PMID:17517600 MGI:3713963 NCBI chr10:82,386,003...82,399,485
Ensembl chr10:82,386,005...82,399,485
JBrowse link
proteoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts12 ADAM metallopeptidase with thrombospondin type 1 motif, 12 ISO (PMID:17895370) RGD PMID:17895370 NCBI chr 2:61,039,072...61,340,687
Ensembl chr 2:61,039,053...61,340,697
JBrowse link
proteoglycan metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galt7 beta-1,4-galactosyltransferase 7 ISO
ISS
(PMID:16583246)
GO_REF:0000024
RGD
UniProt
PMID:16583246 GO_REF:0000024 NCBI chr17:9,549,605...9,558,672
Ensembl chr17:9,550,028...9,558,634
JBrowse link
G Bmp2 bone morphogenetic protein 2 IEA
ISO
GO_REF:0000107
MGI:96533 (MGI:4999722|PMID:16935278)
Ensembl
RGD
PMID:16935278 GO_REF:0000107, MGI:4999722 NCBI chr 3:126,335,963...126,346,771
Ensembl chr 3:126,335,863...126,346,318
JBrowse link
G Col11a1 collagen type XI alpha 1 chain ISO MGI:1856399 (MGI:2664273|PMID:3070812) RGD PMID:3070812 MGI:2664273 NCBI chr 2:216,863,423...217,056,523
Ensembl chr 2:216,863,428...217,056,523
JBrowse link
G Col2a1 collagen type II alpha 1 chain IEA
ISO
GO_REF:0000107
MGI:1857275 (MGI:2664273|PMID:3070812), (MGI:55057|PMID:7276808)
Ensembl
RGD
PMID:3070812, PMID:7276808 GO_REF:0000107, MGI:2664273, MGI:55057 NCBI chr 7:139,454,945...139,484,403
Ensembl chr 7:139,455,242...139,483,997
JBrowse link
G Ihh Indian hedgehog signaling molecule ISO MGI:88177 (MGI:4999722|PMID:16935278) RGD PMID:16935278 MGI:4999722 NCBI chr 9:82,208,223...82,214,440
Ensembl chr 9:82,208,223...82,214,440
JBrowse link
G Ppard peroxisome proliferator-activated receptor delta IDA RGD PMID:17140817 RGD:2324893 NCBI chr20:7,818,289...7,883,482
Ensembl chr20:7,818,289...7,885,333
JBrowse link
regulation of amyloid precursor protein biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Necab1 N-terminal EF-hand calcium binding protein 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:28,507,596...28,737,556
Ensembl chr 5:28,504,558...28,737,719
JBrowse link
G Necab2 N-terminal EF-hand calcium binding protein 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:52,086,325...52,112,633
Ensembl chr19:52,086,325...52,112,629
JBrowse link
G Necab3 N-terminal EF-hand calcium binding protein 3 ISO (PMID:10833507) RGD PMID:10833507 NCBI chr 3:150,047,826...150,062,806
Ensembl chr 3:150,047,826...150,073,721
JBrowse link
regulation of glycoprotein biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2, apoptosis regulator IEA
ISO
GO_REF:0000107
MGI:1857134 (MGI:3526739|PMID:15292044)
Ensembl
RGD
PMID:15292044 GO_REF:0000107, MGI:3526739 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Gata1 GATA binding protein 1 ISO (PMID:15701726)
(MGI:3580921|PMID:15701726)
RGD PMID:15701726 MGI:3580921 NCBI chr  X:15,273,937...15,281,759
Ensembl chr  X:15,378,789...15,382,066
JBrowse link
regulation of protein glycosylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 ISO (MGI:6355606|PMID:22086926) RGD PMID:22086926 MGI:6355606 NCBI chr 3:2,648,787...2,668,770
Ensembl chr 3:2,648,885...2,668,809
JBrowse link
G Mt3 metallothionein 3 ISS
ISO
GO_REF:0000024
(MGI:4881636|PMID:20544854)
UniProt
RGD
PMID:20544854 GO_REF:0000024, MGI:4881636 NCBI chr19:11,324,708...11,326,112
Ensembl chr19:11,324,698...11,326,139
JBrowse link
trimming of terminal mannose on B branch term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edem2 ER degradation enhancing alpha-mannosidase like protein 2 ISO (PMID:25092655) RGD PMID:25092655 NCBI chr 3:151,232,741...151,258,559
Ensembl chr 3:151,232,751...151,258,580
JBrowse link
G Man1b1 mannosidase, alpha, class 1B, member 1 ISO (PMID:10521544), (PMID:18003979) RGD PMID:10521544, PMID:18003979 NCBI chr 3:2,547,259...2,569,051
Ensembl chr 3:2,547,986...2,569,049
JBrowse link
trimming of terminal mannose on C branch term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 ISO (MGI:5645205|PMID:20065073) RGD PMID:20065073 MGI:5645205 NCBI chr 4:140,886,644...140,918,654
Ensembl chr 4:140,886,545...140,915,779
JBrowse link
ubiquitin-dependent glycoprotein ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 ISO (PMID:21062743), (PMID:25092655) RGD PMID:21062743, PMID:25092655 NCBI chr 4:140,886,644...140,918,654
Ensembl chr 4:140,886,545...140,915,779
JBrowse link
G Edem2 ER degradation enhancing alpha-mannosidase like protein 2 ISO (PMID:15537790) RGD PMID:15537790 NCBI chr 3:151,232,741...151,258,559
Ensembl chr 3:151,232,751...151,258,580
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    cellular process 18792
      cellular metabolic process 11073
        cellular macromolecule metabolic process 8548
          glycoprotein metabolic process 363
            N-glycan processing + 15
            elastin metabolic process + 8
            glycoprotein biosynthetic process + 297
            glycoprotein catabolic process + 25
            mannoprotein metabolic process + 0
            negative regulation of glycoprotein metabolic process + 18
            positive regulation of glycoprotein metabolic process + 29
            protein deglycosylation + 12
            proteoglycan metabolic process + 78
            regulation of glycoprotein metabolic process + 52
Path 2
Term Annotations click to browse term
  biological_process 20020
    metabolic process 12263
      organic substance metabolic process 11643
        macromolecule metabolic process 10077
          protein metabolic process 6221
            glycoprotein metabolic process 363
              N-glycan processing + 15
              elastin metabolic process + 8
              glycoprotein biosynthetic process + 297
              glycoprotein catabolic process + 25
              mannoprotein metabolic process + 0
              negative regulation of glycoprotein metabolic process + 18
              positive regulation of glycoprotein metabolic process + 29
              protein deglycosylation + 12
              proteoglycan metabolic process + 78
              regulation of glycoprotein metabolic process + 52
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.