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ONTOLOGY REPORT - ANNOTATIONS


Term:purine deoxyribonucleotide catabolic process
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Accession:GO:0009155 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of purine deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a purine base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
Synonyms:exact_synonym: purine deoxyribonucleotide breakdown;   purine deoxyribonucleotide catabolism;   purine deoxyribonucleotide degradation


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dADP catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt18 nudix hydrolase 18 ISO
ISS
(PMID:22556419)
GO_REF:0000024
RGD
UniProt
PMID:22556419 GO_REF:0000024 NCBI chr15:52,265,557...52,268,081
Ensembl chr15:52,265,557...52,268,079
JBrowse link
dAMP catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase ISO MGI:1857117 (MGI:3640719|PMID:10720488) RGD PMID:10720488 MGI:3640719 NCBI chr 3:160,115,840...160,139,947
Ensembl chr 3:160,115,842...160,139,947
JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase ISO (MGI:3665448|PMID:16462750) RGD PMID:16462750 MGI:3665448 NCBI chr12:9,446,808...9,456,777
Ensembl chr12:9,446,940...9,455,673
JBrowse link
dATP catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase ISO MGI:1857117|MGI:2155977|MGI:2683027 (MGI:2155238|PMID:9478961), (MGI:3619310|PMID:14607964), (MGI:72798|PMID:7731963), (MGI:74163|PMID:7670465), (MGI:76875|PMID:7592575) RGD PMID:7592575, PMID:7670465, PMID:7731963, PMID:9478961, PMID:14607964 MGI:2155238, MGI:3619310, MGI:72798, MGI:74163, MGI:76875 NCBI chr 3:160,115,840...160,139,947
Ensembl chr 3:160,115,842...160,139,947
JBrowse link
G Nudt1 nudix hydrolase 1 ISO
ISS
(PMID:10373420)
GO_REF:0000024
RGD
UniProt
PMID:10373420 GO_REF:0000024 NCBI chr12:16,391,578...16,398,771
Ensembl chr12:16,391,578...16,395,029
JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 ISO (PMID:24141705)
(MGI:5828027|PMID:27920203)
RGD PMID:24141705, PMID:27920203 MGI:5828027 NCBI chr 3:153,210,829...153,250,705
Ensembl chr 3:153,210,829...153,250,641
JBrowse link
dGDP catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt18 nudix hydrolase 18 ISO
ISS
(PMID:22556419)
GO_REF:0000024
RGD
UniProt
PMID:22556419 GO_REF:0000024 NCBI chr15:52,265,557...52,268,081
Ensembl chr15:52,265,557...52,268,079
JBrowse link
dGMP catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5c 5', 3'-nucleotidase, cytosolic ISO (MGI:1353788|PMID:10681516) RGD PMID:10681516 MGI:1353788 NCBI chr10:104,052,807...104,054,805
Ensembl chr10:104,052,831...104,054,805
JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase ISO (MGI:3665448|PMID:16462750) RGD PMID:16462750 MGI:3665448 NCBI chr12:9,446,808...9,456,777
Ensembl chr12:9,446,940...9,455,673
JBrowse link
G Xdh xanthine dehydrogenase ISO (MGI:6306257|PMID:30936145) RGD PMID:30936145 MGI:6306257 NCBI chr 6:25,149,570...25,211,273
Ensembl chr 6:25,149,235...25,211,494
JBrowse link
dGTP catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt1 nudix hydrolase 1 ISS
ISO
GO_REF:0000024
(MGI:77076|PMID:7592783)
(PMID:10373420), (PMID:22556419)
UniProt
RGD
PMID:7592783, PMID:10373420, PMID:22556419 GO_REF:0000024, MGI:77076 NCBI chr12:16,391,578...16,398,771
Ensembl chr12:16,391,578...16,395,029
JBrowse link
G Nudt15 nudix hydrolase 15 ISO
IBA
(PMID:22556419)
PMID:21873635
RGD PMID:22556419, PMID:21873635 RGD:13792537 NCBI chr15:55,417,774...55,456,698
Ensembl chr15:55,419,502...55,456,698
JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 ISO
IBA
(PMID:24217394)
PMID:21873635
RGD PMID:24217394, PMID:21873635 RGD:13792537 NCBI chr 3:153,210,829...153,250,705
Ensembl chr 3:153,210,829...153,250,641
JBrowse link
dITP catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt16 nudix hydrolase 16 ISO MGI:96622 (MGI:5009783|PMID:20081199) RGD PMID:20081199 MGI:5009783 NCBI chr 8:113,673,069...113,675,124
Ensembl chr 8:113,672,758...113,675,128
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    metabolic process 12263
      organic substance metabolic process 11643
        carbohydrate derivative metabolic process 1035
          deoxyribonucleotide metabolic process 34
            deoxyribonucleotide catabolic process 14
              purine deoxyribonucleotide catabolic process 9
                dADP catabolic process 1
                dAMP catabolic process 2
                dATP catabolic process 3
                dGDP catabolic process 1
                dGMP catabolic process 3
                dGTP catabolic process 3
                dITP catabolic process 1
Path 2
Term Annotations click to browse term
  biological_process 20020
    metabolic process 12263
      cellular metabolic process 11073
        cellular aromatic compound metabolic process 5700
          nucleobase-containing compound metabolic process 5488
            nucleobase-containing small molecule metabolic process 591
              nucleoside phosphate metabolic process 513
                nucleotide metabolic process 506
                  deoxyribonucleotide metabolic process 34
                    2'-deoxyribonucleotide metabolic process 28
                      purine deoxyribonucleotide metabolic process 17
                        purine deoxyribonucleotide catabolic process 9
                          dADP catabolic process 1
                          dAMP catabolic process 2
                          dATP catabolic process 3
                          dGDP catabolic process 1
                          dGMP catabolic process 3
                          dGTP catabolic process 3
                          dITP catabolic process 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.