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ONTOLOGY REPORT - ANNOTATIONS


Term:cobalamin metabolic process
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Accession:GO:0009235 term browser browse the term
Definition:The chemical reactions and pathways involving cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom.
Synonyms:exact_synonym: cobalamin metabolism;   vitamin B12 metabolic process;   vitamin B12 metabolism
 narrow_synonym: vitamin B12 reduction


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cobalamin metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcd4 ATP binding cassette subfamily D member 4 JBrowse link 6 108,315,026 108,329,550 RGD:1624291
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase JBrowse link 9 78,862,013 78,882,061 RGD:5135263
G Cblif cobalamin binding intrinsic factor JBrowse link 1 228,118,048 228,132,296 RGD:1624368
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase JBrowse link 11 31,780,477 31,805,728 RGD:5135263
G Mmachc metabolism of cobalamin associated C JBrowse link 5 135,555,587 135,561,723 RGD:1624291
RGD:13792537
G Mmadhc metabolism of cobalamin associated D JBrowse link 3 35,783,511 35,801,474 RGD:1600115
RGD:1624291
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase JBrowse link 17 66,210,444 66,295,014 RGD:1624291
RGD:1600115
cobalamin catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cubn cubilin JBrowse link 17 80,584,921 80,807,181 RGD:8554807
positive regulation of cobalamin metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Clybl citramalyl-CoA lyase JBrowse link 15 108,608,203 108,838,222 RGD:1624291
regulation of cobalamin metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Clybl citramalyl-CoA lyase JBrowse link 15 108,608,203 108,838,222 RGD:1624291
RGD:1600115
RGD:13792537

Term paths to the root
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  biological_process 19578
    metabolic process 11901
      small molecule metabolic process 1824
        vitamin metabolic process 84
          water-soluble vitamin metabolic process 40
            cobalamin metabolic process 9
              cobalamin biosynthetic process + 0
              cobalamin catabolic process 1
              negative regulation of cobalamin metabolic process 0
              positive regulation of cobalamin metabolic process 1
              regulation of cobalamin metabolic process + 1
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.