Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:deoxyribonucleotide biosynthetic process
go back to main search page
Accession:GO:0009263 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of a deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
Synonyms:exact_synonym: deoxyribonucleotide anabolism;   deoxyribonucleotide biosynthesis;   deoxyribonucleotide formation;   deoxyribonucleotide synthesis


show annotations for term's descendants       view all columns           Sort by:
 
deoxyribonucleotide biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC100359539 ribonucleotide reductase M2 polypeptide JBrowse link 19 25,391,689 25,394,229 RGD:13792537
G Rrm1 ribonucleotide reductase catalytic subunit M1 JBrowse link 1 167,538,387 167,562,688 RGD:1624291
RGD:13792537
G Rrm2 ribonucleotide reductase regulatory subunit M2 JBrowse link 6 43,884,627 43,890,818 RGD:1624291
RGD:13792537
RGD:1600115
G Rrm2b ribonucleotide reductase regulatory TP53 inducible subunit M2B JBrowse link 7 76,750,045 76,780,817 RGD:1624291
RGD:13792537
dAMP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dck deoxycytidine kinase JBrowse link 14 20,935,442 20,952,939 RGD:1600115
dATP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adk adenosine kinase JBrowse link 15 3,033,535 3,435,888 RGD:1624291
RGD:1600115
dCDP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cmpk1 cytidine/uridine monophosphate kinase 1 JBrowse link 5 133,759,722 133,786,452 RGD:5133256
dGDP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Guk1 guanylate kinase 1 JBrowse link 10 45,535,617 45,552,455 RGD:5147877
RGD:1624291
dTDP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cmpk2 cytidine/uridine monophosphate kinase 2 JBrowse link 6 45,683,242 45,694,824 RGD:5133256
RGD:13792537
G Dtymk deoxythymidylate kinase JBrowse link 9 100,921,565 100,930,399 RGD:5133687
RGD:13792537
RGD:1624291
dTMP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdadc1 cytidine and dCMP deaminase domain containing 1 JBrowse link 15 39,865,094 39,894,122 RGD:13792537
G Dctd dCMP deaminase JBrowse link 16 47,177,144 47,222,850 RGD:13792537
G Shmt1 serine hydroxymethyltransferase 1 JBrowse link 10 47,030,813 47,059,216 RGD:1624291
G Tyms thymidylate synthetase JBrowse link 9 121,918,875 121,931,564 RGD:1545055
RGD:13792537
RGD:1624291
dTTP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cmpk2 cytidine/uridine monophosphate kinase 2 JBrowse link 6 45,683,242 45,694,824 RGD:13792537
G Dtymk deoxythymidylate kinase JBrowse link 9 100,921,565 100,930,399 RGD:5133687
RGD:13792537
G Tbpl1 TATA-box binding protein like 1 JBrowse link 1 23,977,154 24,002,512 RGD:1624291
G Tyms thymidylate synthetase JBrowse link 9 121,918,875 121,931,564 RGD:1600115
dUDP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cmpk1 cytidine/uridine monophosphate kinase 1 JBrowse link 5 133,759,722 133,786,452 RGD:5133253
G Cmpk2 cytidine/uridine monophosphate kinase 2 JBrowse link 6 45,683,242 45,694,824 RGD:5133256
RGD:13792537
G Dtymk deoxythymidylate kinase JBrowse link 9 100,921,565 100,930,399 RGD:13792537
dUMP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07001512.1 RGD:13792537
G Cdadc1 cytidine and dCMP deaminase domain containing 1 JBrowse link 15 39,865,094 39,894,122 RGD:13792537
G Dctd dCMP deaminase JBrowse link 16 47,177,144 47,222,850 RGD:13792537
G Dut deoxyuridine triphosphatase JBrowse link 3 117,514,399 117,525,450 RGD:2300191
RGD:13792537
RGD:1600115
RGD:2301218

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19439
    metabolic process 11641
      biosynthetic process 5989
        organic substance biosynthetic process 5875
          carbohydrate derivative biosynthetic process 578
            deoxyribonucleotide biosynthetic process 17
              2'-deoxyribonucleotide biosynthetic process + 13
Path 2
Term Annotations click to browse term
  biological_process 19439
    metabolic process 11641
      cellular metabolic process 10644
        cellular aromatic compound metabolic process 5507
          nucleobase-containing compound metabolic process 5278
            nucleobase-containing small molecule metabolic process 577
              nucleoside phosphate metabolic process 498
                nucleotide metabolic process 491
                  nucleotide biosynthetic process 249
                    deoxyribonucleotide biosynthetic process 17
                      2'-deoxyribonucleotide biosynthetic process + 13
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.