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ONTOLOGY REPORT - ANNOTATIONS


Term:amine metabolic process
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Accession:GO:0009308 term browser browse the term
Definition:The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom.
Synonyms:exact_synonym: amine metabolism


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amine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aoc1 amine oxidase, copper containing 1 JBrowse link 4 78,496,043 78,515,582 RGD:1600115
RGD:13792537
G Aoc3 amine oxidase, copper containing 3 JBrowse link 10 89,251,370 89,259,313 RGD:1624291
RGD:13792537
RGD:8554068
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 JBrowse link 8 62,472,087 62,478,122 RGD:1624291
RGD:1600115
G Doxl1 diamine oxidase-like protein 1 JBrowse link 4 78,563,625 78,567,241 RGD:13792537
G Doxl2 diamine oxidase-like protein 2 JBrowse link 4 78,618,743 78,622,525 RGD:13792537
G Inmt indolethylamine N-methyltransferase JBrowse link 4 85,381,907 85,386,203 RGD:1624291
G Svs1 seminal vesicle secretory protein 1 JBrowse link 4 78,639,672 78,644,570 RGD:13792537
G Vcam1 vascular cell adhesion molecule 1 JBrowse link 2 219,071,193 219,090,931 RGD:1624291
RGD:1600115
'de novo' NAD biosynthetic process from tryptophan term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Afmid arylformamidase JBrowse link 10 106,828,963 106,844,314 RGD:1600115
G Haao 3-hydroxyanthranilate 3,4-dioxygenase JBrowse link 6 7,045,145 7,059,227 RGD:13792537
RGD:1600115
G Ido1 indoleamine 2,3-dioxygenase 1 JBrowse link 16 72,216,326 72,228,098 RGD:13792537
G Ido2 indoleamine 2,3-dioxygenase 2 JBrowse link 16 72,232,852 72,291,227 RGD:13792537
G Kmo kynurenine 3-monooxygenase JBrowse link 13 93,684,324 93,715,378 RGD:1600115
G Kynu kynureninase JBrowse link 3 28,416,926 28,566,939 RGD:1600115
benzylpenicillin metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcc2 ATP binding cassette subfamily C member 2 JBrowse link 1 263,554,426 263,612,556 RGD:11081014
cellular biogenic amine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mecp2 methyl CpG binding protein 2 JBrowse link X 156,650,389 156,713,813 RGD:1624291
RGD:1600115
choline catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dmgdh dimethylglycine dehydrogenase JBrowse link 2 23,289,376 23,370,360 RGD:632576
RGD:1624291
RGD:1600115
G Sardh sarcosine dehydrogenase JBrowse link 3 5,737,203 5,802,153 RGD:634034
ethanolamine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chka choline kinase alpha JBrowse link 1 219,076,618 219,126,221 RGD:61551
histamine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hdc histidine decarboxylase JBrowse link 3 119,057,524 119,075,599 RGD:1600115
RGD:1624291
G Prg3 proteoglycan 3, pro eosinophil major basic protein 2 JBrowse link 3 72,395,194 72,401,254 RGD:1624291
RGD:1600115
histamine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hnmt histamine N-methyltransferase JBrowse link 3 905,111 937,038 RGD:1624291
RGD:1600115
histamine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hdc histidine decarboxylase JBrowse link 3 119,057,524 119,075,599 RGD:2303726
RGD:2303735
RGD:2303728
RGD:2303727
G Trh thyrotropin releasing hormone JBrowse link 4 124,110,716 124,113,242 RGD:7241067
RGD:13792537
N-acylethanolamine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abhd4 abhydrolase domain containing 4 JBrowse link 15 32,888,233 32,906,861 RGD:1624291
G Gde1 glycerophosphodiester phosphodiesterase 1 JBrowse link 1 188,367,550 188,407,125 RGD:1624291
RGD:1600115
G Gdpd1 glycerophosphodiester phosphodiesterase domain containing 1 JBrowse link 10 74,334,972 74,376,332 RGD:1624291
RGD:13792537
RGD:1600115
G Naaa N-acylethanolamine acid amidase JBrowse link 14 17,283,262 17,302,364 RGD:1600115
RGD:1624291
G Napepld N-acyl phosphatidylethanolamine phospholipase D JBrowse link 4 9,965,323 10,004,650 RGD:1624291
RGD:13792537
negative regulation of arginine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 JBrowse link 13 50,091,644 50,153,808 RGD:1624291
RGD:1600115
negative regulation of citrulline biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 JBrowse link 13 50,091,644 50,153,808 RGD:1624291
RGD:1600115
negative regulation of dopamine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Comt catechol-O-methyltransferase JBrowse link 11 86,715,981 86,735,630 RGD:2289786
G Htr2c 5-hydroxytryptamine receptor 2C JBrowse link X 118,084,520 118,318,040 RGD:1625003
G Itgam integrin subunit alpha M JBrowse link 1 199,495,312 199,545,738 RGD:1624291
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:5129111
negative regulation of glutamate metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atcay ATCAY kinesin light chain interacting caytaxin JBrowse link 7 11,356,017 11,379,782 RGD:1624291
RGD:1600115
nor-spermidine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sat2 spermidine/spermine N1-acetyltransferase family member 2 JBrowse link 10 56,227,703 56,229,796 RGD:1624291
RGD:1600115
octopamine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dbh dopamine beta-hydroxylase JBrowse link 3 5,709,236 5,731,895 RGD:13792537
G Moxd1 monooxygenase, DBH-like 1 JBrowse link 1 22,124,498 22,206,565 RGD:13792537
G Moxd2 monooxygenase, DBH-like 2 JBrowse link 4 69,117,477 69,125,972 RGD:13792537
octopamine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dbh dopamine beta-hydroxylase JBrowse link 3 5,709,236 5,731,895 RGD:1625401
phenylethylamine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Maoa monoamine oxidase A JBrowse link X 6,554,698 6,620,722 RGD:1600709
polyamine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Azin1 antizyme inhibitor 1 JBrowse link 7 77,345,646 77,372,398 RGD:1600115
G Azin2 antizyme inhibitor 2 JBrowse link 5 147,120,128 147,148,576 RGD:1600115
G LOC100912604 spermidine synthase-like JBrowse link 3 14,588,818 14,591,980 RGD:13792537
G Oaz1 ornithine decarboxylase antizyme 1 JBrowse link 7 11,752,127 11,754,587 RGD:1600115
G Odc1 ornithine decarboxylase 1 JBrowse link 6 42,852,529 42,859,142 RGD:1600115
G Srm spermidine synthase JBrowse link 5 165,405,168 165,408,325 RGD:13792537
polyamine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Paox polyamine oxidase JBrowse link 1 212,578,444 212,603,722 RGD:7244190
RGD:1624291
G Sat1 spermidine/spermine N1-acetyl transferase 1 JBrowse link X 43,626,480 43,629,767 RGD:7244190
G Smox spermine oxidase JBrowse link 3 124,068,796 124,103,726 RGD:1624291
polyamine deacetylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hdac10 histone deacetylase 10 JBrowse link 7 130,102,335 130,109,036 RGD:1600115
RGD:1624291
G Hdac6 histone deacetylase 6 JBrowse link X 15,295,372 15,316,673 RGD:1624291
polyamine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Amd1 adenosylmethionine decarboxylase 1 JBrowse link 20 45,384,000 45,399,694 RGD:1578320
G Oaz1 ornithine decarboxylase antizyme 1 JBrowse link 7 11,752,127 11,754,587 RGD:1600115
G Oaz2 ornithine decarboxylase antizyme 2 JBrowse link 8 71,216,011 71,229,788 RGD:1600115
G Odc1 ornithine decarboxylase 1 JBrowse link 6 42,852,529 42,859,142 RGD:1578320
G Sat1 spermidine/spermine N1-acetyl transferase 1 JBrowse link X 43,626,480 43,629,767 RGD:1599544
positive regulation of acetylcholine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pebp1 phosphatidylethanolamine binding protein 1 JBrowse link 12 45,026,948 45,031,148 RGD:2302806
positive regulation of ammonia assimilation cycle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 JBrowse link 7 30,003,429 30,162,095 RGD:1624291
RGD:1600115
positive regulation of dopamine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Epas1 endothelial PAS domain protein 1 JBrowse link 6 10,306,508 10,385,239 RGD:5128877
G Park7 Parkinsonism associated deglycase JBrowse link 5 167,982,438 168,004,724 RGD:1624291
RGD:1600115
G Vps35 VPS35 retromer complex component JBrowse link 19 27,464,937 27,500,636 RGD:1624291
RGD:1600115
positive regulation of dopamine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abat 4-aminobutyrate aminotransferase JBrowse link 10 7,093,406 7,200,439 RGD:10047061
G Gpr37 G protein-coupled receptor 37 JBrowse link 4 51,822,163 51,844,228 RGD:1624291
RGD:1600115
G Hprt1 hypoxanthine phosphoribosyltransferase 1 JBrowse link X 158,196,640 158,228,815 RGD:1624291
G Maob monoamine oxidase B JBrowse link X 6,430,694 6,533,520 RGD:2316765
G Npy neuropeptide Y JBrowse link 4 79,557,856 79,565,059 RGD:10448966
positive regulation of glutamate metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 JBrowse link 7 30,003,429 30,162,095 RGD:1624291
positive regulation of homocysteine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Comt catechol-O-methyltransferase JBrowse link 11 86,715,981 86,735,630 RGD:2289784
positive regulation of L-dopa biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Park7 Parkinsonism associated deglycase JBrowse link 5 167,982,438 168,004,724 RGD:1624291
RGD:1600115
positive regulation of spermidine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Paox polyamine oxidase JBrowse link 1 212,578,444 212,603,722 RGD:1624291
putrescine acetylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sat2 spermidine/spermine N1-acetyltransferase family member 2 JBrowse link 10 56,227,703 56,229,796 RGD:1624291
RGD:1600115
putrescine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Odc1 ornithine decarboxylase 1 JBrowse link 6 42,852,529 42,859,142 RGD:1578320
RGD:7242912
G Paox polyamine oxidase JBrowse link 1 212,578,444 212,603,722 RGD:1624291
putrescine biosynthetic process from arginine, using agmatinase term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agmat agmatinase JBrowse link 5 160,306,754 160,321,951 RGD:13792537
putrescine biosynthetic process from ornithine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Azin1 antizyme inhibitor 1 JBrowse link 7 77,345,646 77,372,398 RGD:13792537
G Azin2 antizyme inhibitor 2 JBrowse link 5 147,120,128 147,148,576 RGD:13792537
G Odc1 ornithine decarboxylase 1 JBrowse link 6 42,852,529 42,859,142 RGD:1600115
RGD:13792537
RGD:1624291
G RGD1562036 similar to ornithine decarboxylase JBrowse link 5 148,432,213 148,444,188 RGD:13792537
putrescine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Paox polyamine oxidase JBrowse link 1 212,578,444 212,603,722 RGD:12790650
RGD:1624291
regulation of acetylcholine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fshr follicle stimulating hormone receptor JBrowse link 6 12,796,383 12,997,817 RGD:1624291
RGD:1600115
regulation of arginine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fh fumarate hydratase JBrowse link 13 93,651,486 93,677,371 RGD:1600115
RGD:1624291
G Slc7a7 solute carrier family 7 member 7 JBrowse link 15 33,013,346 33,059,733 RGD:1624291
RGD:13792537
regulation of catecholamine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Vhl von Hippel-Lindau tumor suppressor JBrowse link 4 145,580,869 145,587,835 RGD:619592
regulation of cellular amino acid metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ins2 insulin 2 JBrowse link 1 215,856,967 215,858,034 RGD:1624291
regulation of cysteine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc7a11 solute carrier family 7 member 11 JBrowse link 2 139,453,774 139,528,479 RGD:1624291
RGD:1600115
regulation of dopamine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit JBrowse link 2 189,088,570 189,096,785 RGD:1624291
RGD:1600115
G Drd1 dopamine receptor D1 JBrowse link 17 11,099,736 11,104,352 RGD:1624291
RGD:1600115
G Drd4 dopamine receptor D4 JBrowse link 1 214,278,296 214,282,818 RGD:1624291
RGD:1600115
G Htr1a 5-hydroxytryptamine receptor 1A JBrowse link 2 36,246,628 36,247,896 RGD:1624291
RGD:1600115
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 JBrowse link 3 43,111,258 43,128,391 RGD:1624291
RGD:1600115
G Pde1b phosphodiesterase 1B JBrowse link 7 145,117,951 145,147,711 RGD:1624291
RGD:1600115
G Pnkd PNKD metallo-beta-lactamase domain containing JBrowse link 9 81,566,074 81,634,531 RGD:1624291
RGD:1600115
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:1624291
G Slc6a3 solute carrier family 6 member 3 JBrowse link 1 32,323,011 32,363,983 RGD:1624291
RGD:1600115
G Tacr3 tachykinin receptor 3 JBrowse link 2 240,021,152 240,118,971 RGD:2305963
regulation of glutamate metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apc APC regulator of WNT signaling pathway JBrowse link 18 27,011,710 27,106,323 RGD:6484536
G Slc7a11 solute carrier family 7 member 11 JBrowse link 2 139,453,774 139,528,479 RGD:1624291
RGD:1600115
regulation of glutamine family amino acid metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sirt4 sirtuin 4 JBrowse link 12 46,862,358 46,876,593 RGD:1624291
RGD:1600115
regulation of sulfur amino acid metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cacna1a calcium voltage-gated channel subunit alpha1 A JBrowse link 19 25,453,236 25,749,550 RGD:1624291
RGD:1600115
serotonin biosynthetic process from tryptophan term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cyp2d4 cytochrome P450, family 2, subfamily d, polypeptide 4 JBrowse link 7 123,599,264 123,608,436 RGD:11353778
G Tph1 tryptophan hydroxylase 1 JBrowse link 1 102,669,868 102,699,442 RGD:625621
spermidine acetylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sat1 spermidine/spermine N1-acetyl transferase 1 JBrowse link X 43,626,480 43,629,767 RGD:7244190
RGD:13792537
G Sat2 spermidine/spermine N1-acetyltransferase family member 2 JBrowse link 10 56,227,703 56,229,796 RGD:1624291
RGD:13792537
G Satl1 spermidine/spermine N1-acetyl transferase-like 1 JBrowse link X 83,772,526 83,788,556 RGD:13792537
spermidine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agmat agmatinase JBrowse link 5 160,306,754 160,321,951 RGD:1600115
G Amd1 adenosylmethionine decarboxylase 1 JBrowse link 20 45,384,000 45,399,694 RGD:1578320
RGD:1624291
RGD:13792537
RGD:7242912
RGD:7242911
G LOC100912604 spermidine synthase-like JBrowse link 3 14,588,818 14,591,980 RGD:13792537
G Srm spermidine synthase JBrowse link 5 165,405,168 165,408,325 RGD:1359042
RGD:13792537
RGD:1624291
RGD:7242928
RGD:7242920
spermidine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dhps deoxyhypusine synthase JBrowse link 19 26,184,665 26,188,755 RGD:2316236
G Paox polyamine oxidase JBrowse link 1 212,578,444 212,603,722 RGD:7244191
RGD:1624291
RGD:12790650
spermidine deacetylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hdac10 histone deacetylase 10 JBrowse link 7 130,102,335 130,109,036 RGD:1600115
RGD:1624291
G Hdac6 histone deacetylase 6 JBrowse link X 15,295,372 15,316,673 RGD:1624291
spermidine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dhps deoxyhypusine synthase JBrowse link 19 26,184,665 26,188,755 RGD:1624291
spermine acetylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sat1 spermidine/spermine N1-acetyl transferase 1 JBrowse link X 43,626,480 43,629,767 RGD:7244190
G Sat2 spermidine/spermine N1-acetyltransferase family member 2 JBrowse link 10 56,227,703 56,229,796 RGD:1624291
RGD:1600115
spermine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Amd1 adenosylmethionine decarboxylase 1 JBrowse link 20 45,384,000 45,399,694 RGD:1578320
RGD:1624291
RGD:13792537
RGD:7242912
RGD:7242911
G Sms spermine synthase JBrowse link X 40,363,646 40,415,110 RGD:7242928
RGD:13792537
spermine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Paox polyamine oxidase JBrowse link 1 212,578,444 212,603,722 RGD:7244191
RGD:1624291
RGD:12790650
G Smox spermine oxidase JBrowse link 3 124,068,796 124,103,726 RGD:7244190
RGD:1624291
spermine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sms spermine synthase JBrowse link X 40,363,646 40,415,110 RGD:1624291
tryptophan catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acmsd aminocarboxymuconate semialdehyde decarboxylase JBrowse link 13 44,424,689 44,468,734 RGD:70243
G Haao 3-hydroxyanthranilate 3,4-dioxygenase JBrowse link 6 7,045,145 7,059,227 RGD:1600115
G Kmo kynurenine 3-monooxygenase JBrowse link 13 93,684,324 93,715,378 RGD:1600115
G Kynu kynureninase JBrowse link 3 28,416,926 28,566,939 RGD:1624291
tryptophan catabolic process to acetyl-CoA term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Kynu kynureninase JBrowse link 3 28,416,926 28,566,939 RGD:2303721
G Tdo2 tryptophan 2,3-dioxygenase JBrowse link 2 180,897,059 180,914,919 RGD:2303721
RGD:13792537
tryptophan catabolic process to kynurenine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Afmid arylformamidase JBrowse link 10 106,828,963 106,844,314 RGD:1624291
RGD:13792537
RGD:1600115
G Ido1 indoleamine 2,3-dioxygenase 1 JBrowse link 16 72,216,326 72,228,098 RGD:2290190
RGD:13792537
RGD:1624291
RGD:1600115
RGD:2290543
G Ido2 indoleamine 2,3-dioxygenase 2 JBrowse link 16 72,232,852 72,291,227 RGD:1600115
RGD:13792537
RGD:1624291
G Kynu kynureninase JBrowse link 3 28,416,926 28,566,939 RGD:13792537
G Tdo2 tryptophan 2,3-dioxygenase JBrowse link 2 180,897,059 180,914,919 RGD:1600115
RGD:1624291
tryptophan metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp7a ATPase copper transporting alpha JBrowse link X 77,076,085 77,193,644 RGD:1624291
G Tdo2 tryptophan 2,3-dioxygenase JBrowse link 2 180,897,059 180,914,919 RGD:2290190
RGD:2291804
RGD:2290313

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18166
    metabolic process 10845
      organic substance metabolic process 10283
        organonitrogen compound metabolic process 6419
          amine metabolic process 91
            2-aminobenzenesulfonate metabolic process + 0
            amine biosynthetic process + 16
            amine catabolic process + 16
            cellular amine metabolic process + 83
            cytokinin metabolic process + 0
            methane biosynthetic process from dimethylamine + 0
            methane biosynthetic process from trimethylamine + 0
            methylamine metabolic process + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.