Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:amine metabolic process
go back to main search page
Accession:GO:0009308 term browser browse the term
Definition:The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom.
Synonyms:exact_synonym: amine metabolism


GViewer not supported for chinchilla.
show annotations for term's descendants           Sort by:
 
amine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC102010850 cytochrome P450 1A1 ISO (MGI:3703667|PMID:17052995) MGI PMID:17052995 MGI:3703667 NCBI chrNW_004955450:3,183,958...3,189,488
Ensembl chrNW_004955450:3,183,750...3,189,488
JBrowse link
G Vcam1 vascular cell adhesion molecule 1 ISO (PMID:23474851) UniProtKB PMID:23474851 NCBI chrNW_004955435:5,390,745...5,410,025
Ensembl chrNW_004955435:5,390,751...5,411,691
JBrowse link
benzylpenicillin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc2 ATP binding cassette subfamily C member 2 ISO RGD PMID:19255943 RGD:11081014 NCBI chrNW_004955507:5,724,788...5,791,281
Ensembl chrNW_004955507:5,724,762...5,790,812
JBrowse link
catecholamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crhr2 corticotropin releasing hormone receptor 2 ISO RGD PMID:17194738 RGD:5131263 NCBI chrNW_004955410:31,830,333...31,874,384
Ensembl chrNW_004955410:31,828,506...31,875,100
JBrowse link
G Th tyrosine hydroxylase ISO RGD PMID:20025246 RGD:4139888 NCBI chrNW_004955422:13,943,590...13,951,102
Ensembl chrNW_004955422:13,943,552...13,951,137
JBrowse link
catecholamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Comt catechol-O-methyltransferase ISO (PMID:11559542), (PMID:15645182), (PMID:21846718) UniProt PMID:11559542, PMID:15645182, PMID:21846718 NCBI chrNW_004955442:18,130,282...18,152,153
Ensembl chrNW_004955442:18,130,987...18,137,412
JBrowse link
catecholamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha ISO (MGI:54307|PMID:17511) MGI PMID:17511 MGI:54307 NCBI chrNW_004955557:1,355,471...1,515,725
Ensembl chrNW_004955557:1,355,397...1,515,393
JBrowse link
G Mtpn myotrophin ISO RGD PMID:12051753 RGD:625450 NCBI chrNW_004955494:6,805,518...6,844,454
Ensembl chrNW_004955494:6,805,262...6,845,394
JBrowse link
cellular biogenic amine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mecp2 methyl-CpG binding protein 2 ISO (MGI:3607765|PMID:15975715) MGI PMID:15975715 MGI:3607765 NCBI chrNW_004955580:674,014...737,586
Ensembl chrNW_004955580:679,109...735,288
JBrowse link
choline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmgdh dimethylglycine dehydrogenase ISO (PMID:10102904) UniProtKB PMID:10102904 NCBI chrNW_004955425:22,045,977...22,103,381
Ensembl chrNW_004955425:22,045,993...22,102,852
JBrowse link
dopamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtr1 angiotensin II receptor type 1 ISO RGD PMID:20097214 RGD:6903884 NCBI chrNW_004955474:8,733,942...8,781,305
Ensembl chrNW_004955474:8,733,942...8,781,255
JBrowse link
G Agtr2 angiotensin II receptor type 2 ISO RGD PMID:20097214 RGD:6903884 NCBI chrNW_004955534:3,653,112...3,654,248
Ensembl chrNW_004955534:3,653,157...3,654,248
JBrowse link
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit ISO RGD PMID:12438507 RGD:704388 NCBI chrNW_004955416:30,687,518...30,798,700
Ensembl chrNW_004955416:30,687,478...30,798,700
JBrowse link
G Dao D-amino acid oxidase ISO (PMID:17303072) UniProtKB PMID:17303072 NCBI chrNW_004955455:10,095,597...10,127,244
Ensembl chrNW_004955455:10,095,300...10,127,666
JBrowse link
G Ddc dopa decarboxylase ISO RGD PMID:12703659 RGD:4139893 NCBI chrNW_004955456:3,513,779...3,582,851
Ensembl chrNW_004955456:3,513,042...3,582,911
JBrowse link
G Gch1 GTP cyclohydrolase 1 ISO (PMID:16338639) UniProtKB PMID:16338639 NCBI chrNW_004955409:8,624,225...8,670,436
Ensembl chrNW_004955409:8,624,468...8,668,614
JBrowse link
G Gpr37 G protein-coupled receptor 37 ISO (MGI:3046856|PMID:15218106) MGI PMID:15218106 MGI:3046856 NCBI chrNW_004955479:6,061,424...6,080,129
Ensembl chrNW_004955479:6,057,276...6,080,994
JBrowse link
G Nr4a2 nuclear receptor subfamily 4 group A member 2 ISO (MGI:1203924|PMID:9608532), (MGI:3767764|PMID:16782508) MGI PMID:9608532, PMID:16782508 MGI:1203924, MGI:3767764 NCBI chrNW_004955449:16,928,780...16,944,536
Ensembl chrNW_004955449:16,937,794...16,945,731
JBrowse link
G Slc6a3 solute carrier family 6 member 3 ISO (MGI:2386819|PMID:9520487) MGI PMID:9520487 MGI:2386819 NCBI chrNW_004955504:721,470...747,553
Ensembl chrNW_004955504:721,429...747,630
JBrowse link
G Snca synuclein alpha ISO (MGI:1352916|PMID:10707987) MGI PMID:10707987 MGI:1352916 NCBI chrNW_004955405:854,011...962,741
Ensembl chrNW_004955405:853,946...965,403
JBrowse link
G Tgfb2 transforming growth factor beta 2 ISO (MGI:3622848|PMID:16257223) UniProt PMID:16257223 MGI:3622848 NCBI chrNW_004955406:174,949...249,248
Ensembl chrNW_004955406:172,814...249,248
JBrowse link
G Th tyrosine hydroxylase ISO (PMID:12457228) BHF-UCL PMID:12457228 NCBI chrNW_004955422:13,943,590...13,951,102
Ensembl chrNW_004955422:13,943,552...13,951,137
JBrowse link
dopamine biosynthetic process from tyrosine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Th tyrosine hydroxylase ISO PMID:11943812
(MGI:2386819|PMID:9520487)
(MGI:72094|PMID:7715703), (MGI:77787|PMID:7592982)
BHF-UCL
MGI
RGD
PMID:2427363, PMID:7592982, PMID:7715703, PMID:9520487, PMID:11943812, PMID:19584816 MGI:2386819, MGI:72094, MGI:77787, RGD:1580046, RGD:5129111, RGD:5130972 NCBI chrNW_004955422:13,943,590...13,951,102
Ensembl chrNW_004955422:13,943,552...13,951,137
JBrowse link
dopamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Comt catechol-O-methyltransferase ISO (MGI:2386819|PMID:9520487) MGI PMID:9520487 MGI:2386819 NCBI chrNW_004955442:18,130,282...18,152,153
Ensembl chrNW_004955442:18,130,987...18,137,412
JBrowse link
G Dbh dopamine beta-hydroxylase ISO (PMID:3443096), (PMID:7961964)
(MGI:1332340|PMID:10051631)
(MGI:5787847|PMID:27148966), (MGI:72180|PMID:7715704)
UniProtKB
MGI
UniProt
PMID:3443096, PMID:7715704, PMID:7961964, PMID:10051631, PMID:27148966 MGI:1332340, MGI:5787847, MGI:72180 NCBI chrNW_004955513:2,918,085...2,932,481
Ensembl chrNW_004955513:2,918,286...2,932,247
JBrowse link
G Maoa amine oxidase [flavin-containing] A ISO (MGI:2386819|PMID:9520487) MGI PMID:9520487 MGI:2386819 NCBI chrNW_004955516:4,494,133...4,576,317
Ensembl chrNW_004955516:4,493,946...4,576,317
JBrowse link
G Slc6a3 solute carrier family 6 member 3 ISO (MGI:2386819|PMID:9520487) MGI PMID:9520487 MGI:2386819 NCBI chrNW_004955504:721,470...747,553
Ensembl chrNW_004955504:721,429...747,630
JBrowse link
dopamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha ISO (MGI:50550|PMID:1752214), (MGI:65000|PMID:8174230) MGI PMID:1752214, PMID:8174230 MGI:50550, MGI:65000, MGI:71923 NCBI chrNW_004955557:1,355,471...1,515,725
Ensembl chrNW_004955557:1,355,397...1,515,393
JBrowse link
G Comt catechol-O-methyltransferase ISO (MGI:5510279|PMID:23863468)
(MGI:4830461|PMID:19930170)
MGI PMID:19930170, PMID:23863468 MGI:4830461, MGI:5510279 NCBI chrNW_004955442:18,130,282...18,152,153
Ensembl chrNW_004955442:18,130,987...18,137,412
JBrowse link
G Drd2 dopamine receptor D2 ISO (MGI:68905|PMID:7925842) MGI PMID:7925842 MGI:68905 NCBI chrNW_004955412:15,054,255...15,114,558
Ensembl chrNW_004955412:15,054,038...15,114,573
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A ISO (MGI:2384280|PMID:11160454) MGI PMID:11160454 MGI:2384280 NCBI chrNW_004955442:8,171,114...8,565,187
Ensembl chrNW_004955442:8,174,232...8,562,059
JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 ISO (MGI:1321418|PMID:9886073), (MGI:65825|PMID:7509865), (MGI:65928|PMID:1432691) MGI PMID:1432691, PMID:7509865, PMID:9886073 MGI:1321418, MGI:65825, MGI:65928 NCBI chrNW_004955473:462,940...510,006 JBrowse link
G Ndufs4 NADH:ubiquinone oxidoreductase subunit S4 ISO (MGI:6150107|PMID:28327638) MGI PMID:28327638 MGI:6150107 NCBI chrNW_004955446:13,764,907...13,864,824
Ensembl chrNW_004955446:13,764,907...13,864,824
JBrowse link
G Npr1 natriuretic peptide receptor 1 ISO RGD PMID:15544851 RGD:1580153 NCBI chrNW_004955545:323,386...338,654
Ensembl chrNW_004955545:323,956...338,097
JBrowse link
G Nr4a2 nuclear receptor subfamily 4 group A member 2 ISO (MGI:3529728|PMID:12385813) MGI PMID:12385813 MGI:3529728 NCBI chrNW_004955449:16,928,780...16,944,536
Ensembl chrNW_004955449:16,937,794...16,945,731
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase NOT ISO (MGI:3525458|PMID:15684050)
(MGI:2675710|PMID:12915482)
MGI PMID:12915482, PMID:15684050 MGI:2675710, MGI:3525458 NCBI chrNW_004955439:18,664,230...19,953,358
Ensembl chrNW_004955439:18,664,379...19,951,152
JBrowse link
G Snca synuclein alpha ISO (MGI:3057254|PMID:15465911) MGI PMID:15465911 MGI:3057254 NCBI chrNW_004955405:854,011...962,741
Ensembl chrNW_004955405:853,946...965,403
JBrowse link
G Sncaip synuclein alpha interacting protein ISO (PMID:14506261) MGI PMID:14506261 NCBI chrNW_004955521:410,270...548,691
Ensembl chrNW_004955521:482,433...548,751
JBrowse link
G Sncb synuclein beta ISO (MGI:3057254|PMID:15465911) MGI PMID:15465911 MGI:3057254 NCBI chrNW_004955408:28,894,204...28,903,095
Ensembl chrNW_004955408:28,894,204...28,903,095
JBrowse link
G Spr sepiapterin reductase ISO (MGI:3722569|PMID:16532389) MGI PMID:16532389 MGI:3722569 NCBI chrNW_004955424:12,711,064...12,716,000
Ensembl chrNW_004955424:12,711,064...12,716,000
JBrowse link
epinephrine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pnmt phenylethanolamine N-methyltransferase ISO RGD PMID:7914070 RGD:4139902 NCBI chrNW_004955451:14,414,836...14,417,972
Ensembl chrNW_004955451:14,416,121...14,417,901
JBrowse link
G Th tyrosine hydroxylase ISO (PMID:12457228) BHF-UCL PMID:12457228 NCBI chrNW_004955422:13,943,590...13,951,102
Ensembl chrNW_004955422:13,943,552...13,951,137
JBrowse link
epinephrine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha ISO (MGI:50550|PMID:1752214) MGI PMID:1752214 MGI:50550, MGI:71923 NCBI chrNW_004955557:1,355,471...1,515,725
Ensembl chrNW_004955557:1,355,397...1,515,393
JBrowse link
ethanolamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chka choline kinase alpha ISO RGD PMID:1577786 RGD:61551 NCBI chrNW_004955422:17,710,981...17,766,256
Ensembl chrNW_004955422:17,710,434...17,766,256
JBrowse link
G Gde1 glycerophosphodiester phosphodiesterase 1 ISO (MGI:3793397|PMID:18227059) UniProt PMID:18227059 MGI:3793397 NCBI chrNW_004955442:3,186,440...3,219,092
Ensembl chrNW_004955442:3,186,440...3,219,092
JBrowse link
histamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdc histidine decarboxylase ISO (PMID:22767596)
(MGI:2138019|PMID:11478947)
UniProtKB
MGI
PMID:11478947, PMID:22767596 MGI:2138019 NCBI chrNW_004955409:4,051,574...4,072,641
Ensembl chrNW_004955409:4,051,271...4,072,642
JBrowse link
histamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnmt histamine N-methyltransferase ISO (PMID:26206890) UniProtKB PMID:26206890 NCBI chrNW_004955440:5,084,198...5,137,577
Ensembl chrNW_004955440:5,084,081...5,139,348
JBrowse link
histamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdc histidine decarboxylase ISO RGD PMID:5898, PMID:4449071, PMID:7075603, PMID:9525922 RGD:2303726, RGD:2303727, RGD:2303728, RGD:2303735 NCBI chrNW_004955409:4,051,574...4,072,641
Ensembl chrNW_004955409:4,051,271...4,072,642
JBrowse link
G Hnmt histamine N-methyltransferase ISO (PMID:23505051) ARUK-UCL PMID:23505051 NCBI chrNW_004955440:5,084,198...5,137,577
Ensembl chrNW_004955440:5,084,081...5,139,348
JBrowse link
G Trh thyrotropin releasing hormone ISO RGD PMID:17760865 RGD:7241067 NCBI chrNW_004955429:17,487,275...17,489,385 JBrowse link
N-acylethanolamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd4 abhydrolase domain containing 4, N-acyl phospholipase B ISO (MGI:3695251|PMID:16818490) MGI PMID:16818490 MGI:3695251 NCBI chrNW_004955409:37,650,220...37,662,950
Ensembl chrNW_004955409:37,650,109...37,663,459
JBrowse link
G Gde1 glycerophosphodiester phosphodiesterase 1 ISO (MGI:5790171|PMID:25596343)
(MGI:5295534|PMID:21801852)
MGI
UniProt
PMID:21801852, PMID:25596343 MGI:5295534, MGI:5790171 NCBI chrNW_004955442:3,186,440...3,219,092
Ensembl chrNW_004955442:3,186,440...3,219,092
JBrowse link
G Gdpd1 glycerophosphodiester phosphodiesterase domain containing 1 ISO (PMID:25596343), (PMID:27637550)
(MGI:6104349|PMID:27637550)
(MGI:5790171|PMID:25596343)
MGI
UniProt
PMID:25596343, PMID:27637550 MGI:5790171, MGI:6104349 NCBI chrNW_004955451:3,751,229...3,799,651
Ensembl chrNW_004955451:3,751,804...3,799,336
JBrowse link
G Gdpd3 glycerophosphodiester phosphodiesterase domain containing 3 ISO (PMID:27637550)
(MGI:6104349|PMID:27637550)
UniProt PMID:27637550 MGI:6104349 NCBI chrNW_004955493:6,876,943...6,883,716
Ensembl chrNW_004955493:6,877,486...6,883,698
JBrowse link
G Naaa N-acylethanolamine acid amidase ISO (PMID:15655246), (PMID:30301806)
PMID:22860206
UniProt PMID:15655246, PMID:22860206, PMID:30301806 RGD:39458030 NCBI chrNW_004955433:630,627...674,675
Ensembl chrNW_004955433:630,483...674,675
JBrowse link
G Napepld N-acyl phosphatidylethanolamine phospholipase D ISO (MGI:3695251|PMID:16818490)
(MGI:3044670|PMID:14634025)
MGI PMID:14634025, PMID:16818490 MGI:3044670, MGI:3695251 NCBI chrNW_004955410:8,217,684...8,233,302
Ensembl chrNW_004955410:8,220,400...8,247,486
JBrowse link
negative regulation of arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 ISO (PMID:19278978) BHF-UCL PMID:19278978 NCBI chrNW_004955406:39,552,034...39,645,694
Ensembl chrNW_004955406:39,552,019...39,645,694
JBrowse link
negative regulation of catecholamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha ISO (MGI:54307|PMID:17511) MGI PMID:17511 MGI:54307 NCBI chrNW_004955557:1,355,471...1,515,725
Ensembl chrNW_004955557:1,355,397...1,515,393
JBrowse link
negative regulation of citrulline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 ISO (PMID:19278978) BHF-UCL PMID:19278978 NCBI chrNW_004955406:39,552,034...39,645,694
Ensembl chrNW_004955406:39,552,019...39,645,694
JBrowse link
negative regulation of dopamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Comt catechol-O-methyltransferase ISO RGD PMID:15190105 RGD:2289786 NCBI chrNW_004955442:18,130,282...18,152,153
Ensembl chrNW_004955442:18,130,987...18,137,412
JBrowse link
G Htr2c 5-hydroxytryptamine receptor 2C ISO RGD PMID:17018023 RGD:1625003 NCBI chrNW_004955490:912,615...1,126,347
Ensembl chrNW_004955490:910,415...1,126,373
JBrowse link
G Itgam integrin subunit alpha M ISO (MGI:3814938|PMID:18981141) ARUK-UCL PMID:18981141 MGI:3814938 NCBI chrNW_004955493:8,116,886...8,160,806
Ensembl chrNW_004955493:8,116,834...8,260,759
JBrowse link
G Snca synuclein alpha ISO PMID:11943812 BHF-UCL PMID:11943812 RGD:5129111 NCBI chrNW_004955405:854,011...962,741
Ensembl chrNW_004955405:853,946...965,403
JBrowse link
negative regulation of glutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atcay ATCAY kinesin light chain interacting caytaxin ISO (PMID:16899818) UniProtKB PMID:16899818 NCBI chrNW_004955495:5,715,943...5,741,202
Ensembl chrNW_004955495:5,715,850...5,741,202
JBrowse link
nor-spermidine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sat2 spermidine/spermine N1-acetyltransferase family member 2 ISO (PMID:12803540) UniProtKB PMID:12803540 NCBI chrNW_004955467:9,306,210...9,308,668
Ensembl chrNW_004955467:9,305,746...9,308,668
JBrowse link
norepinephrine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha ISO (MGI:53801|PMID:4405722)
(MGI:53940|PMID:4858102)
MGI PMID:4405722, PMID:4858102 MGI:53801, MGI:53940 NCBI chrNW_004955557:1,355,471...1,515,725
Ensembl chrNW_004955557:1,355,397...1,515,393
JBrowse link
G Dbh dopamine beta-hydroxylase ISO (MGI:1203930|PMID:9603211), (MGI:1332340|PMID:10051631)
(MGI:5787847|PMID:27148966), (MGI:72180|PMID:7715704)
(PMID:27148966)
RGD
MGI
UniProt
UniProtKB
PMID:7715704, PMID:9603211, PMID:10051631, PMID:10573542, PMID:27148966 MGI:1203930, MGI:1332340, MGI:5787847, MGI:72180, RGD:1625403 NCBI chrNW_004955513:2,918,085...2,932,481
Ensembl chrNW_004955513:2,918,286...2,932,247
JBrowse link
G Epas1 endothelial PAS domain protein 1 ISO RGD PMID:19457096 RGD:5128877 NCBI chrNW_004955441:13,244,626...13,328,220
Ensembl chrNW_004955441:13,244,626...13,328,369
JBrowse link
G Gata3 GATA binding protein 3 ISO (MGI:1859081|PMID:10835639) MGI PMID:10835639 MGI:1859081 NCBI chrNW_004955421:24,448,446...24,477,885
Ensembl chrNW_004955421:24,457,496...24,478,744
JBrowse link
G Insm1 INSM transcriptional repressor 1 ISO (MGI:3772428|PMID:18094025) UniProt PMID:18094025 MGI:3772428 NCBI chrNW_004955415:28,396,176...28,398,114 JBrowse link
G Kl klotho ISO RGD PMID:20086041 RGD:10403068 NCBI chrNW_004955431:12,782,913...12,833,215
Ensembl chrNW_004955431:12,782,846...12,833,215
JBrowse link
G Th tyrosine hydroxylase ISO (PMID:12457228) BHF-UCL PMID:12457228 NCBI chrNW_004955422:13,943,590...13,951,102
Ensembl chrNW_004955422:13,943,552...13,951,137
JBrowse link
norepinephrine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha ISO (MGI:53851|PMID:4147174) MGI PMID:4147174 MGI:53851, MGI:71923 NCBI chrNW_004955557:1,355,471...1,515,725
Ensembl chrNW_004955557:1,355,397...1,515,393
JBrowse link
G Epas1 endothelial PAS domain protein 1 ISO (MGI:1313089|PMID:9808618) MGI PMID:9808618 MGI:1313089 NCBI chrNW_004955441:13,244,626...13,328,220
Ensembl chrNW_004955441:13,244,626...13,328,369
JBrowse link
G Pnmt phenylethanolamine N-methyltransferase ISO RGD PMID:3945626 RGD:5130757 NCBI chrNW_004955451:14,414,836...14,417,972
Ensembl chrNW_004955451:14,416,121...14,417,901
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO (MGI:3047192|PMID:15249681) MGI PMID:15249681 MGI:3047192 NCBI chrNW_004955439:18,664,230...19,953,358
Ensembl chrNW_004955439:18,664,379...19,951,152
JBrowse link
G Rnf180 ring finger protein 180 ISO (MGI:5505713|PMID:23926250) MGI PMID:23926250 MGI:5505713 NCBI chrNW_004955446:4,544,128...4,733,295
Ensembl chrNW_004955446:4,543,974...4,733,569
JBrowse link
G Rtl4 retrotransposon Gag like 4 ISO (MGI:5749620|PMID:26402067) MGI PMID:26402067 MGI:5749620 NCBI chrNW_004955490:3,403,958...3,497,789 JBrowse link
G Spr sepiapterin reductase ISO (MGI:3722569|PMID:16532389) MGI PMID:16532389 MGI:3722569 NCBI chrNW_004955424:12,711,064...12,716,000
Ensembl chrNW_004955424:12,711,064...12,716,000
JBrowse link
octopamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dbh dopamine beta-hydroxylase ISO RGD PMID:11521740 RGD:1625401 NCBI chrNW_004955513:2,918,085...2,932,481
Ensembl chrNW_004955513:2,918,286...2,932,247
JBrowse link
phenylethylamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Maoa amine oxidase [flavin-containing] A ISO RGD PMID:11754741 RGD:1600709 NCBI chrNW_004955516:4,494,133...4,576,317
Ensembl chrNW_004955516:4,493,946...4,576,317
JBrowse link
polyamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sat1 spermidine/spermine N1-acetyltransferase 1 ISO (PMID:15283699) UniProt PMID:15283699 NCBI chrNW_004955509:4,198,876...4,202,103
Ensembl chrNW_004955509:4,198,651...4,202,483
JBrowse link
G Sat2 spermidine/spermine N1-acetyltransferase family member 2 NOT ISO (PMID:15283699) UniProt PMID:15283699 NCBI chrNW_004955467:9,306,210...9,308,668
Ensembl chrNW_004955467:9,305,746...9,308,668
JBrowse link
polyamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Paox polyamine oxidase ISO (PMID:12477380)
(MGI:2663545|PMID:12660232)
UniProtKB
MGI
RGD
PMID:12477380, PMID:12660232, PMID:15541750 MGI:2663545, RGD:7244190 NCBI chrNW_004955477:11,028,488...11,038,556 JBrowse link
G Sat1 spermidine/spermine N1-acetyltransferase 1 ISO RGD PMID:15541750 RGD:7244190 NCBI chrNW_004955509:4,198,876...4,202,103
Ensembl chrNW_004955509:4,198,651...4,202,483
JBrowse link
G Smox spermine oxidase ISO (PMID:12477380) UniProtKB PMID:12477380 NCBI chrNW_004955415:14,937,438...14,971,874
Ensembl chrNW_004955415:14,937,131...14,989,972
JBrowse link
polyamine deacetylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdac10 histone deacetylase 10 ISO (PMID:28516954) UniProt PMID:28516954 NCBI chrNW_004955413:33,272,600...33,277,893
Ensembl chrNW_004955413:33,272,714...33,277,686
JBrowse link
G Hdac6 histone deacetylase 6 NOT ISO (PMID:28516954) UniProt PMID:28516954 NCBI chrNW_004955543:348,314...378,391
Ensembl chrNW_004955543:348,019...378,071
JBrowse link
polyamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amd1 adenosylmethionine decarboxylase 1 ISO RGD PMID:10430362 RGD:1578320 NCBI chrNW_004955411:35,541,517...35,563,209
Ensembl chrNW_004955411:35,541,517...35,563,209
JBrowse link
G Odc1 ornithine decarboxylase 1 ISO RGD PMID:10430362 RGD:1578320 NCBI chrNW_004955487:5,603,722...5,608,386
Ensembl chrNW_004955487:5,603,722...5,608,386
JBrowse link
G Sat1 spermidine/spermine N1-acetyltransferase 1 ISO RGD PMID:11172929 RGD:1599544 NCBI chrNW_004955509:4,198,876...4,202,103
Ensembl chrNW_004955509:4,198,651...4,202,483
JBrowse link
positive regulation of acetylcholine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pebp1 phosphatidylethanolamine binding protein 1 ISO RGD PMID:8888012 RGD:2302806 NCBI chrNW_004955455:13,217,012...13,222,370 JBrowse link
positive regulation of ammonia assimilation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1h4 nuclear receptor subfamily 1 group H member 4 ISO (MGI:5306122|PMID:21757002) BHF-UCL PMID:21757002 MGI:5306122 NCBI chrNW_004955405:36,160,360...36,236,258
Ensembl chrNW_004955405:36,160,049...36,237,751
JBrowse link
positive regulation of dopamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epas1 endothelial PAS domain protein 1 ISO RGD PMID:19457096 RGD:5128877 NCBI chrNW_004955441:13,244,626...13,328,220
Ensembl chrNW_004955441:13,244,626...13,328,369
JBrowse link
G Park7 Parkinsonism associated deglycase ISO (PMID:19703902) ParkinsonsUK-UCL PMID:19703902 NCBI chrNW_004955486:4,974,130...4,985,927
Ensembl chrNW_004955486:4,969,497...4,985,885
JBrowse link
G Vps35 VPS35 retromer complex component ISO (MGI:5694519|PMID:26203154) ParkinsonsUK-UCL PMID:26203154 MGI:5694519 NCBI chrNW_004955448:207,582...240,264
Ensembl chrNW_004955448:204,991...240,160
JBrowse link
positive regulation of dopamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase ISO RGD PMID:11239920 RGD:10047061 NCBI chrNW_004955442:9,422,849...9,516,054
Ensembl chrNW_004955442:9,422,849...9,516,103
JBrowse link
G Gpr37 G protein-coupled receptor 37 ISO (MGI:3046856|PMID:15218106) MGI PMID:15218106 MGI:3046856 NCBI chrNW_004955479:6,061,424...6,080,129
Ensembl chrNW_004955479:6,057,276...6,080,994
JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 ISO (PMID:8643611) UniProtKB PMID:8643611 NCBI chrNW_004955473:462,940...510,006 JBrowse link
G Maob monoamine oxidase B ISO RGD PMID:12175458 RGD:2316765 NCBI chrNW_004955516:4,328,286...4,473,419
Ensembl chrNW_004955516:4,328,476...4,472,593
JBrowse link
G Npy neuropeptide Y ISO RGD PMID:19579268 RGD:10448966 NCBI chrNW_004955410:26,348,388...26,355,232
Ensembl chrNW_004955410:26,348,504...26,355,297
JBrowse link
positive regulation of glutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1h4 nuclear receptor subfamily 1 group H member 4 ISO (MGI:5306122|PMID:21757002) BHF-UCL PMID:21757002 MGI:5306122 NCBI chrNW_004955405:36,160,360...36,236,258
Ensembl chrNW_004955405:36,160,049...36,237,751
JBrowse link
positive regulation of homocysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Comt catechol-O-methyltransferase ISO RGD PMID:15779086 RGD:2289784 NCBI chrNW_004955442:18,130,282...18,152,153
Ensembl chrNW_004955442:18,130,987...18,137,412
JBrowse link
positive regulation of L-dopa biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Park7 Parkinsonism associated deglycase ISO (PMID:16731528) ParkinsonsUK-UCL PMID:16731528 NCBI chrNW_004955486:4,974,130...4,985,927
Ensembl chrNW_004955486:4,969,497...4,985,885
JBrowse link
positive regulation of spermidine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Paox polyamine oxidase ISO (PMID:16354669) UniProtKB PMID:16354669 NCBI chrNW_004955477:11,028,488...11,038,556 JBrowse link
positive regulation of transcription from RNA polymerase II promoter involved in norepinephrine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hand2 heart and neural crest derivatives expressed 2 ISO (MGI:4413411|PMID:19008477) BHF-UCL PMID:19008477 MGI:4413411 NCBI chrNW_004955403:33,478,034...33,481,613
Ensembl chrNW_004955403:33,478,924...33,481,608
JBrowse link
putrescine acetylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sat2 spermidine/spermine N1-acetyltransferase family member 2 ISO (PMID:12803540) UniProtKB PMID:12803540 NCBI chrNW_004955467:9,306,210...9,308,668
Ensembl chrNW_004955467:9,305,746...9,308,668
JBrowse link
putrescine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Odc1 ornithine decarboxylase 1 ISO RGD PMID:1415709, PMID:10430362 RGD:1578320, RGD:7242912 NCBI chrNW_004955487:5,603,722...5,608,386
Ensembl chrNW_004955487:5,603,722...5,608,386
JBrowse link
G Paox polyamine oxidase ISO (PMID:16354669) UniProtKB PMID:16354669 NCBI chrNW_004955477:11,028,488...11,038,556 JBrowse link
putrescine biosynthetic process from ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Odc1 ornithine decarboxylase 1 ISO (MGI:5574513|PMID:24967154) UniProt PMID:24967154 MGI:5574513 NCBI chrNW_004955487:5,603,722...5,608,386
Ensembl chrNW_004955487:5,603,722...5,608,386
JBrowse link
putrescine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Paox polyamine oxidase ISO (PMID:16354669) UniProtKB
UniProt
PMID:16354669 RGD:12790650 NCBI chrNW_004955477:11,028,488...11,038,556 JBrowse link
putrescine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aoc1 amine oxidase copper containing 1 ISO (PMID:8144586) UniProt PMID:8144586 NCBI chrNW_004955491:5,316,482...5,326,262
Ensembl chrNW_004955491:5,316,476...5,326,305
JBrowse link
regulation of acetylcholine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fshr follicle stimulating hormone receptor ISO (MGI:3628883|PMID:12204217) MGI PMID:12204217 MGI:3628883 NCBI chrNW_004955441:15,422,190...15,585,446
Ensembl chrNW_004955441:15,422,190...15,585,537
JBrowse link
regulation of arginine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin ISO (MGI:4830440|PMID:19284480) UniProt PMID:19284480 MGI:4830440 NCBI chrNW_004955493:6,696,520...6,707,849 JBrowse link
regulation of arginine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fh fumarate hydratase ISO (MGI:5496931|PMID:23643539) UniProt PMID:23643539 MGI:5496931 NCBI chrNW_004955406:10,535,801...10,558,649
Ensembl chrNW_004955406:10,535,323...10,561,627
JBrowse link
G Slc7a7 solute carrier family 7 member 7 ISO (MGI:3760035|PMID:17376816) MGI PMID:17376816 MGI:3760035 NCBI chrNW_004955409:37,467,151...37,513,533
Ensembl chrNW_004955409:37,468,583...37,513,533
JBrowse link
regulation of catecholamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vhl von Hippel-Lindau tumor suppressor ISO RGD PMID:11912140 RGD:619592 NCBI chrNW_004955561:1,573,525...1,578,295 JBrowse link
regulation of cellular amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ins insulin ISO (PMID:3553851) BHF-UCL PMID:3553851 NCBI chrNW_004955422:13,909,408...13,910,419
Ensembl chrNW_004955422:13,909,407...13,910,419
JBrowse link
regulation of cysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc7a11 solute carrier family 7 member 11 ISO (MGI:3710059|PMID:17200146) MGI PMID:17200146 MGI:3710059 NCBI chrNW_004955428:5,238,460...5,309,085
Ensembl chrNW_004955428:5,237,865...5,309,085
JBrowse link
regulation of dopamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit ISO (MGI:3618656|PMID:11282258) MGI PMID:11282258 MGI:3618656 NCBI chrNW_004955545:1,065,457...1,077,056
Ensembl chrNW_004955545:1,065,457...1,077,526
JBrowse link
G Drd1 dopamine receptor D1 ISO (MGI:2136539|PMID:11438590) MGI PMID:11438590 MGI:2136539 NCBI chrNW_004955408:28,003,229...28,006,595
Ensembl chrNW_004955408:28,003,229...28,006,595
JBrowse link
G Drd4 dopamine receptor D4 ISO (MGI:1097029|PMID:9323127) MGI PMID:9323127 MGI:1097029 NCBI chrNW_004955476:11,424,347...11,426,962
Ensembl chrNW_004955476:11,424,411...11,426,960
JBrowse link
G Htr1a 5-hydroxytryptamine receptor 1A ISO (MGI:1927024|PMID:11080193) UniProt PMID:11080193 MGI:1927024 NCBI chrNW_004955446:4,913,181...4,917,726
Ensembl chrNW_004955446:4,913,884...4,915,146
JBrowse link
G Nr4a2 nuclear receptor subfamily 4 group A member 2 ISO (MGI:2671567|PMID:12915123) MGI PMID:12915123 MGI:2671567 NCBI chrNW_004955449:16,928,780...16,944,536
Ensembl chrNW_004955449:16,937,794...16,945,731
JBrowse link
G Pde1b phosphodiesterase 1B ISO (MGI:3769297|PMID:17559891) MGI PMID:17559891 MGI:3769297 NCBI chrNW_004955458:1,791,090...1,819,261
Ensembl chrNW_004955458:1,791,090...1,821,813
JBrowse link
G Pnkd PNKD metallo-beta-lactamase domain containing ISO (MGI:5466578|PMID:22214848) MGI PMID:22214848 MGI:5466578 NCBI chrNW_004955453:15,030,436...15,104,084
Ensembl chrNW_004955453:15,030,436...15,104,084
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO (PMID:22314364) ParkinsonsUK-UCL PMID:22314364 NCBI chrNW_004955439:18,664,230...19,953,358
Ensembl chrNW_004955439:18,664,379...19,951,152
JBrowse link
G Slc6a3 solute carrier family 6 member 3 ISO (MGI:2386819|PMID:9520487), (MGI:894559|PMID:9247269) MGI PMID:9247269, PMID:9520487 MGI:2386819, MGI:894559 NCBI chrNW_004955504:721,470...747,553
Ensembl chrNW_004955504:721,429...747,630
JBrowse link
G Tacr3 tachykinin receptor 3 ISO RGD PMID:8574643 RGD:2305963 NCBI chrNW_004955496:5,152,134...5,222,565
Ensembl chrNW_004955496:5,151,668...5,222,624
JBrowse link
regulation of glutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC regulator of WNT signaling pathway ISO RGD PMID:19858196 RGD:6484536 NCBI chrNW_004955418:2,567,804...2,675,062
Ensembl chrNW_004955418:2,566,975...2,674,832
JBrowse link
G Slc7a11 solute carrier family 7 member 11 ISO (MGI:5562570|PMID:24548853)
(MGI:4948153|PMID:21490221), (MGI:5616960|PMID:25429150)
MGI PMID:21490221, PMID:24548853, PMID:25429150 MGI:4948153, MGI:5562570, MGI:5616960 NCBI chrNW_004955428:5,238,460...5,309,085
Ensembl chrNW_004955428:5,237,865...5,309,085
JBrowse link
regulation of glutamine family amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sirt4 sirtuin 4 ISO (MGI:5490691|PMID:23562301) CACAO PMID:23562301 MGI:5490691 NCBI chrNW_004955455:11,322,812...11,334,786
Ensembl chrNW_004955455:11,324,479...11,334,817
JBrowse link
spermidine acetylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sat1 spermidine/spermine N1-acetyltransferase 1 ISO (PMID:15283699) RGD
UniProt
PMID:15283699, PMID:15541750 RGD:7244190 NCBI chrNW_004955509:4,198,876...4,202,103
Ensembl chrNW_004955509:4,198,651...4,202,483
JBrowse link
G Sat2 spermidine/spermine N1-acetyltransferase family member 2 NOT ISO (PMID:12803540)
(PMID:15283699)
UniProtKB
UniProt
PMID:12803540, PMID:15283699 NCBI chrNW_004955467:9,306,210...9,308,668
Ensembl chrNW_004955467:9,305,746...9,308,668
JBrowse link
spermidine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amd1 adenosylmethionine decarboxylase 1 ISO (MGI:3584197|PMID:11856372) RGD
MGI
PMID:1415709, PMID:10430362, PMID:10712236, PMID:11856372 MGI:3584197, RGD:1578320, RGD:7242911, RGD:7242912 NCBI chrNW_004955411:35,541,517...35,563,209
Ensembl chrNW_004955411:35,541,517...35,563,209
JBrowse link
G Srm spermidine synthase ISO (PMID:17585781) RGD
UniProtKB
PMID:8494549, PMID:12843627, PMID:16931179, PMID:17585781 RGD:1359042, RGD:7242920, RGD:7242928 NCBI chrNW_004955486:2,631,579...2,634,779
Ensembl chrNW_004955486:2,631,586...2,634,527
JBrowse link
spermidine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhps deoxyhypusine synthase ISO RGD PMID:7721768 RGD:2316236 NCBI chrNW_004955415:31,778,632...31,782,782
Ensembl chrNW_004955415:31,778,632...31,782,782
JBrowse link
G Paox polyamine oxidase ISO PMID:16354669
(PMID:16354669)
UniProt
RGD
UniProtKB
PMID:7560898, PMID:16354669 RGD:12790650, RGD:7244191 NCBI chrNW_004955477:11,028,488...11,038,556 JBrowse link
spermidine deacetylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdac10 histone deacetylase 10 ISO (PMID:28516954) UniProt PMID:28516954 NCBI chrNW_004955413:33,272,600...33,277,893
Ensembl chrNW_004955413:33,272,714...33,277,686
JBrowse link
G Hdac6 histone deacetylase 6 NOT ISO (PMID:28516954) UniProt PMID:28516954 NCBI chrNW_004955543:348,314...378,391
Ensembl chrNW_004955543:348,019...378,071
JBrowse link
spermidine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhps deoxyhypusine synthase ISO (PMID:23525104) UniProtKB PMID:23525104 NCBI chrNW_004955415:31,778,632...31,782,782
Ensembl chrNW_004955415:31,778,632...31,782,782
JBrowse link
spermine acetylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sat2 spermidine/spermine N1-acetyltransferase family member 2 ISO (PMID:12803540) UniProtKB PMID:12803540 NCBI chrNW_004955467:9,306,210...9,308,668
Ensembl chrNW_004955467:9,305,746...9,308,668
JBrowse link
spermine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amd1 adenosylmethionine decarboxylase 1 ISO (MGI:3584197|PMID:11856372) RGD
MGI
PMID:1415709, PMID:10430362, PMID:10712236, PMID:11856372 MGI:3584197, RGD:1578320, RGD:7242911, RGD:7242912 NCBI chrNW_004955411:35,541,517...35,563,209
Ensembl chrNW_004955411:35,541,517...35,563,209
JBrowse link
G Sms spermine synthase ISO RGD PMID:8494549 RGD:7242928 NCBI chrNW_004955509:2,277,501...2,328,612
Ensembl chrNW_004955509:2,276,878...2,329,620
JBrowse link
spermine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Paox polyamine oxidase ISO (PMID:16354669) UniProtKB
RGD
UniProt
PMID:7560898, PMID:16354669 RGD:12790650, RGD:7244191 NCBI chrNW_004955477:11,028,488...11,038,556 JBrowse link
G Smox spermine oxidase ISO (MGI:2429361|PMID:12141946)
(PMID:18422650)
RGD
MGI
UniProtKB
PMID:12141946, PMID:15541750, PMID:18422650 MGI:2429361, RGD:7244190 NCBI chrNW_004955415:14,937,438...14,971,874
Ensembl chrNW_004955415:14,937,131...14,989,972
JBrowse link
spermine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sms spermine synthase ISO (MGI:1197776|PMID:9467015) MGI PMID:9467015 MGI:1197776 NCBI chrNW_004955509:2,277,501...2,328,612
Ensembl chrNW_004955509:2,276,878...2,329,620
JBrowse link
tryptophan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acmsd aminocarboxymuconate semialdehyde decarboxylase ISO RGD PMID:11802786 RGD:70243 NCBI chrNW_004955440:2,348,434...2,412,706
Ensembl chrNW_004955440:2,348,396...2,412,706
JBrowse link
G Kynu kynureninase ISO (PMID:17334708) UniProtKB PMID:17334708 NCBI chrNW_004955440:9,420,141...9,536,767
Ensembl chrNW_004955440:9,420,009...9,536,761
JBrowse link
tryptophan catabolic process to acetyl-CoA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kynu kynureninase ISO RGD PMID:7236232 RGD:2303721 NCBI chrNW_004955440:9,420,141...9,536,767
Ensembl chrNW_004955440:9,420,009...9,536,761
JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase ISO RGD PMID:7236232 RGD:2303721 NCBI chrNW_004955471:11,229,795...11,245,255
Ensembl chrNW_004955471:11,229,273...11,245,375
JBrowse link
tryptophan catabolic process to kynurenine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afmid arylformamidase ISO (MGI:3587527|PMID:15866519) MGI PMID:15866519 MGI:3587527 NCBI chrNW_004955506:4,351,623...4,379,528
Ensembl chrNW_004955506:4,365,926...4,379,447
JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 ISO (MGI:2151782|PMID:2419335), (MGI:2156954|PMID:11751753) RGD
MGI
PMID:2419335, PMID:10719243, PMID:11513477, PMID:11751753 MGI:2151782, MGI:2156954, RGD:2290190, RGD:2290543 NCBI chrNW_004955536:2,944,770...2,955,829
Ensembl chrNW_004955536:2,943,611...2,955,829
JBrowse link
G Ido2 indoleamine 2,3-dioxygenase 2 ISO (PMID:17671174)
(MGI:3712725|PMID:17499941)
(MGI:3719924|PMID:17671174)
UniProtKB
MGI
PMID:17499941, PMID:17671174 MGI:3712725, MGI:3719924 NCBI chrNW_004955536:2,894,410...2,938,862
Ensembl chrNW_004955536:2,894,308...2,939,016
JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase ISO (PMID:27762317) UniProtKB PMID:27762317 NCBI chrNW_004955471:11,229,795...11,245,255
Ensembl chrNW_004955471:11,229,273...11,245,375
JBrowse link
tryptophan metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha ISO (MGI:53851|PMID:4147174) MGI PMID:4147174 MGI:53851 NCBI chrNW_004955557:1,355,471...1,515,725
Ensembl chrNW_004955557:1,355,397...1,515,393
JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase ISO RGD PMID:3400092, PMID:3899109, PMID:10719243 RGD:2290190, RGD:2290313, RGD:2291804 NCBI chrNW_004955471:11,229,795...11,245,255
Ensembl chrNW_004955471:11,229,273...11,245,375
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11892
    metabolic process 7608
      organic substance metabolic process 7317
        organonitrogen compound metabolic process 4445
          amine metabolic process 95
            2-aminobenzenesulfonate metabolic process + 0
            amine biosynthetic process + 31
            amine catabolic process + 17
            cellular amine metabolic process + 93
            cytokinin metabolic process + 0
            methane biosynthetic process from dimethylamine + 0
            methane biosynthetic process from trimethylamine + 0
            methylamine metabolic process + 0
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.