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ONTOLOGY REPORT - ANNOTATIONS


Term:amine biosynthetic process
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Accession:GO:0009309 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom.
Synonyms:exact_synonym: amine anabolism;   amine biosynthesis;   amine formation;   amine synthesis
 xref: MIPS_funcat:01.20.17.03


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histamine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hdc histidine decarboxylase JBrowse link 3 119,057,524 119,075,599 RGD:1600115
RGD:1624291
G Prg3 proteoglycan 3, pro eosinophil major basic protein 2 JBrowse link 3 72,395,194 72,401,254 RGD:1624291
RGD:1600115
octopamine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dbh dopamine beta-hydroxylase JBrowse link 3 5,709,236 5,731,895 RGD:13792537
G Moxd1 monooxygenase, DBH-like 1 JBrowse link 1 22,124,498 22,206,565 RGD:13792537
G Moxd2 monooxygenase, DBH-like 2 JBrowse link 4 69,117,477 69,125,972 RGD:13792537
polyamine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Azin1 antizyme inhibitor 1 JBrowse link 7 77,345,646 77,372,398 RGD:1600115
G Azin2 antizyme inhibitor 2 JBrowse link 5 147,120,128 147,148,576 RGD:1600115
G LOC100912604 spermidine synthase-like JBrowse link 3 14,588,818 14,591,980 RGD:13792537
G Oaz1 ornithine decarboxylase antizyme 1 JBrowse link 7 11,752,127 11,754,587 RGD:1600115
G Odc1 ornithine decarboxylase 1 JBrowse link 6 42,852,529 42,859,142 RGD:1600115
G Srm spermidine synthase JBrowse link 5 165,405,168 165,408,325 RGD:13792537
positive regulation of spermidine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Paox polyamine oxidase JBrowse link 1 212,578,444 212,603,722 RGD:1624291
putrescine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Odc1 ornithine decarboxylase 1 JBrowse link 6 42,852,529 42,859,142 RGD:1578320
RGD:7242912
G Paox polyamine oxidase JBrowse link 1 212,578,444 212,603,722 RGD:1624291
putrescine biosynthetic process from arginine, using agmatinase term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agmat agmatinase JBrowse link 5 160,306,754 160,321,951 RGD:13792537
putrescine biosynthetic process from ornithine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Azin1 antizyme inhibitor 1 JBrowse link 7 77,345,646 77,372,398 RGD:13792537
G Azin2 antizyme inhibitor 2 JBrowse link 5 147,120,128 147,148,576 RGD:13792537
G Odc1 ornithine decarboxylase 1 JBrowse link 6 42,852,529 42,859,142 RGD:1600115
RGD:13792537
RGD:1624291
G RGD1562036 similar to ornithine decarboxylase JBrowse link 5 148,432,213 148,444,188 RGD:13792537
spermidine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agmat agmatinase JBrowse link 5 160,306,754 160,321,951 RGD:1600115
G Amd1 adenosylmethionine decarboxylase 1 JBrowse link 20 45,384,000 45,399,694 RGD:1578320
RGD:1624291
RGD:13792537
RGD:7242912
RGD:7242911
G LOC100912604 spermidine synthase-like JBrowse link 3 14,588,818 14,591,980 RGD:13792537
G Srm spermidine synthase JBrowse link 5 165,405,168 165,408,325 RGD:1359042
RGD:13792537
RGD:1624291
RGD:7242928
RGD:7242920
spermine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Amd1 adenosylmethionine decarboxylase 1 JBrowse link 20 45,384,000 45,399,694 RGD:1578320
RGD:1624291
RGD:13792537
RGD:7242912
RGD:7242911
G Sms spermine synthase JBrowse link X 40,363,646 40,415,110 RGD:7242928
RGD:13792537

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18008
    metabolic process 10729
      nitrogen compound metabolic process 9148
        organonitrogen compound metabolic process 6369
          amine metabolic process 90
            amine biosynthetic process 16
              cellular biogenic amine biosynthetic process + 16
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.