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ONTOLOGY REPORT - ANNOTATIONS


Term:oligosaccharide metabolic process
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Accession:GO:0009311 term browser browse the term
Definition:The chemical reactions and pathways involving oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages.
Synonyms:exact_synonym: oligosaccharide metabolism
 narrow_synonym: multicellular organismal oligosaccharide metabolic process
 alt_id: GO:0051690


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oligosaccharide metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07013843.1 RGD:13792537
G Fut4 fucosyltransferase 4 JBrowse link 8 13,258,768 13,262,729 RGD:1600115
RGD:1624291
G Gla galactosidase, alpha JBrowse link X 105,405,915 105,417,331 RGD:1624291
RGD:13792537
G LOC103692171 mannosyl-oligosaccharide glucosidase JBrowse link 4 114,813,988 114,817,463 RGD:1600115
G Mogs mannosyl-oligosaccharide glucosidase JBrowse link 4 113,948,328 113,951,731 RGD:1600115
G Naga alpha-N-acetylgalactosaminidase JBrowse link 7 123,563,047 123,572,074 RGD:13792537
G St3gal6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 JBrowse link 11 44,176,518 44,237,119 RGD:1624291
RGD:1600115
G St6gal2 ST6 beta-galactoside alpha-2,6-sialyltransferase 2 JBrowse link 9 6,966,291 7,060,499 RGD:1624291
RGD:1600115
G St6galnac3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 JBrowse link 2 259,379,653 259,918,813 RGD:13792537
G St6galnac4 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 JBrowse link 3 11,607,103 11,619,595 RGD:13792537
G St6galnac5 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 JBrowse link 2 258,025,177 259,150,709 RGD:13792537
G St6galnac6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 JBrowse link 3 11,620,050 11,641,460 RGD:13792537
G St8sia1 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 JBrowse link 4 177,065,266 177,195,942 RGD:13792537
G St8sia2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 JBrowse link 1 135,336,374 135,406,699 RGD:1624291
RGD:13792537
G St8sia3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 JBrowse link 18 59,748,766 59,755,257 RGD:1624291
RGD:13792537
G St8sia4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 JBrowse link 9 103,117,705 103,207,154 RGD:1624291
RGD:13792537
G St8sia5 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 JBrowse link 18 73,564,010 73,630,256 RGD:13792537
G St8sia6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 JBrowse link 17 80,960,785 81,002,830 RGD:1624291
RGD:13792537
cellular oligosaccharide catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gba3 glucosylceramidase beta 3 JBrowse link 14 64,390,793 64,535,213 RGD:1624291
G Neu2 neuraminidase 2 JBrowse link 9 94,702,095 94,724,903 RGD:1600115
RGD:1624291
cellular oligosaccharide metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abo ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase JBrowse link 3 4,374,679 4,394,374 RGD:2315736
lactose biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G B4galt1 beta-1,4-galactosyltransferase 1 JBrowse link 5 57,121,768 57,168,610 RGD:1624291
RGD:1600115
G Lalba lactalbumin, alpha JBrowse link 7 140,088,420 140,096,347 RGD:1600115
maltose metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gaa glucosidase, alpha, acid JBrowse link 10 108,395,873 108,412,999 RGD:1600115
oligosaccharide biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G B3galnt1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) JBrowse link 2 166,226,736 166,255,978 RGD:1624291
G B3galt1 Beta-1,3-galactosyltransferase 1 JBrowse link 3 53,699,409 54,269,612 RGD:1624291
G B3galt2 Beta-1,3-galactosyltransferase 2 JBrowse link 13 60,435,946 60,444,957 RGD:1624291
G B4galt1 beta-1,4-galactosyltransferase 1 JBrowse link 5 57,121,768 57,168,610 RGD:1302270
RGD:1624291
G Mgat2 alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase JBrowse link 6 91,476,698 91,479,187 RGD:1600115
G Mpdu1 mannose-P-dolichol utilization defect 1 JBrowse link 10 56,261,636 56,267,213 RGD:1624291
RGD:13792537
G St3gal2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 JBrowse link 19 43,273,251 43,324,265 RGD:1624291
RGD:1600115
G St3gal4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 JBrowse link 8 36,264,741 36,314,811 RGD:1624291
G St6galnac1 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 JBrowse link 10 105,713,305 105,723,700 RGD:1624291
G St6galnac5 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 JBrowse link 2 258,025,177 259,150,709 RGD:1624291
G St6galnac6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 JBrowse link 3 11,620,050 11,641,460 RGD:1624291
oligosaccharide catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ctbs chitobiase JBrowse link 2 252,305,874 252,320,387 RGD:2301430
G Gm2a GM2 ganglioside activator JBrowse link 10 40,438,394 40,450,927 RGD:1624291
G Hexb hexosaminidase subunit beta JBrowse link 2 27,983,925 28,003,260 RGD:1624291
RGD:1600115
G Man2c1 mannosidase, alpha, class 2C, member 1 JBrowse link 8 61,805,697 61,816,800 RGD:13792537
G Neu1 neuraminidase 1 JBrowse link 20 4,610,995 4,615,258 RGD:1600115
RGD:13792537
RGD:1624291
G Neu2 neuraminidase 2 JBrowse link 9 94,702,095 94,724,903 RGD:1624291
RGD:13792537
RGD:1600115
G Neu3 neuraminidase 3 JBrowse link 1 164,803,574 164,814,777 RGD:1624291
RGD:13792537
G Neu4 neuraminidase 4 JBrowse link 9 101,284,902 101,290,558 RGD:1624291
RGD:13792537
G NEWGENE_1308624 sialidase 4 JBrowse link 9 101,003,455 101,008,365 RGD:13792537
sucrose biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fbp1 fructose-bisphosphatase 1 JBrowse link 17 396,175 417,480 RGD:13792537
G Fbp2 fructose-bisphosphatase 2 JBrowse link 17 372,554 389,918 RGD:13792537
trehalose catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Treh trehalase JBrowse link 8 48,983,802 48,998,072 RGD:1624291
trehalose metabolism in response to stress term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Braf B-Raf proto-oncogene, serine/threonine kinase JBrowse link 4 67,389,331 67,520,549 RGD:1624291

Term paths to the root
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Term Annotations click to browse term
  biological_process 19858
    metabolic process 12097
      organic substance metabolic process 11495
        carbohydrate metabolic process 630
          oligosaccharide metabolic process 44
            6-alpha-maltosylglucose metabolic process + 0
            ajugose metabolic process + 0
            cellodextrin metabolic process + 0
            cellooligosaccharide metabolic process + 0
            cellotriose metabolic process + 0
            cellular oligosaccharide metabolic process + 3
            cyclodextrin metabolic process + 0
            disaccharide metabolic process + 7
            lipooligosaccharide metabolic process + 0
            lipopolysaccharide core region metabolic process + 0
            maltoheptaose metabolic process + 0
            oligosaccharide biosynthetic process + 14
            oligosaccharide catabolic process + 11
            raffinose metabolic process + 0
            stachyose metabolic process + 0
            verbascose metabolic process + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.