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ONTOLOGY REPORT - ANNOTATIONS


Term:oligosaccharide biosynthetic process
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Accession:GO:0009312 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages.
Synonyms:exact_synonym: oligosaccharide anabolism;   oligosaccharide biosynthesis;   oligosaccharide formation;   oligosaccharide synthesis


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oligosaccharide biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3galnt1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) ISO (MGI:MGI:1101659|PMID:9417047) MGI PMID:9417047 MGI:MGI:1101659 NCBI chrNW_004955448:11,556,179...11,583,556 JBrowse link
G B3galt1 beta-1,3-galactosyltransferase 1 ISO (MGI:MGI:1101659|PMID:9417047)
(PMID:9582303)
MGI
UniProtKB
PMID:9417047, PMID:9582303 MGI:MGI:1101659 NCBI chrNW_004955449:6,452,189...7,007,329 JBrowse link
G B3galt2 beta-1,3-galactosyltransferase 2 ISO (MGI:MGI:1101659|PMID:9417047) MGI PMID:9417047 MGI:MGI:1101659 NCBI chrNW_004955406:30,603,238...30,610,822 JBrowse link
G B4galt1 beta-1,4-galactosyltransferase 1 ISO (MGI:MGI:1290117|PMID:9813328)
(PMID:2120039)
MGI
UniProtKB
PMID:2120039, PMID:9813328 MGI:MGI:1290117 NCBI chrNW_004955472:2,490,649...2,536,053 JBrowse link
G Mpdu1 mannose-P-dolichol utilization defect 1 ISO (PMID:11179430)
(PMID:11733564)
UniProtKB PMID:11179430, PMID:11733564 NCBI chrNW_004955467:9,335,488...9,339,888 JBrowse link
G St3gal2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 ISO (PMID:9266697) BHF-UCL PMID:9266697 NCBI chrNW_004955484:3,176,214...3,230,433 JBrowse link
G St3gal4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 ISO (PMID:8288606) BHF-UCL PMID:8288606 NCBI chrNW_004955412:27,376,270...27,418,770 JBrowse link
G St6galnac1 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 ISO (MGI:MGI:2153262|PMID:10788794) MGI PMID:10788794 MGI:MGI:2153262 NCBI chrNW_004955506:5,656,182...5,677,596 JBrowse link
G St6galnac6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 ISO (MGI:MGI:5284811|PMID:12668675) BHF-UCL PMID:12668675 MGI:MGI:5284811 NCBI chrNW_004955419:771,721...792,756 JBrowse link
lactose biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galt1 beta-1,4-galactosyltransferase 1 ISO (MGI:MGI:87365|PMID:9155011) MGI PMID:9155011 MGI:MGI:87365 NCBI chrNW_004955472:2,490,649...2,536,053 JBrowse link

Term paths to the root
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  biological_process 11857
    metabolic process 7593
      primary metabolic process 6730
        carbohydrate metabolic process 381
          oligosaccharide metabolic process 26
            oligosaccharide biosynthetic process 9
              6-alpha-maltosylglucose biosynthetic process 0
              disaccharide biosynthetic process + 1
              lipooligosaccharide biosynthetic process + 0
              lipopolysaccharide core region biosynthetic process 0
              raffinose family oligosaccharide biosynthetic process + 0
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.