Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:oligosaccharide biosynthetic process
go back to main search page
Accession:GO:0009312 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages.
Synonyms:exact_synonym: oligosaccharide anabolism;   oligosaccharide biosynthesis;   oligosaccharide formation;   oligosaccharide synthesis


show annotations for term's descendants           Sort by:
 
oligosaccharide biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3GALNT1 beta-1,3-N-acetylgalactosaminyltransferase 1 ISO (MGI:MGI:1101659|PMID:9417047) MGI PMID:9417047 MGI:MGI:1101659 NCBI chr34:27,081,678...27,106,863 JBrowse link
G B3GALT1 beta-1,3-galactosyltransferase 1 IEA Ensembl GO_REF:0000107 NCBI chr36:12,263,162...12,766,525
Ensembl chr36:12,761,821...12,762,801
JBrowse link
G B3GALT2 beta-1,3-galactosyltransferase 2 IEA Ensembl GO_REF:0000107 NCBI chr38:5,868,822...5,876,539
Ensembl chr38:5,874,011...5,875,279
JBrowse link
G B4GALT1 beta-1,4-galactosyltransferase 1 ISO (PMID:2120039)
(MGI:MGI:1290117|PMID:9813328)
UniProtKB
MGI
PMID:2120039, PMID:9813328 MGI:MGI:1290117 NCBI chr11:50,223,880...50,276,745
Ensembl chr11:50,226,242...50,276,730
JBrowse link
G MGAT2 alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase IEA InterPro GO_REF:0000002 NCBI chr 8:26,244,894...26,247,960
Ensembl chr 8:26,245,407...26,246,747
JBrowse link
G MPDU1 mannose-P-dolichol utilization defect 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:32,504,644...32,507,903
Ensembl chr 5:32,504,695...32,507,291
JBrowse link
G ST3GAL2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 IEA Ensembl GO_REF:0000107 NCBI chr 5:76,377,782...76,427,998
Ensembl chr 5:76,379,702...76,394,525
JBrowse link
G ST3GAL4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 IEA Ensembl GO_REF:0000107 NCBI chr 5:8,132,663...8,160,008
Ensembl chr 5:8,133,085...8,141,254
JBrowse link
G ST6GALNAC1 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 ISO (MGI:MGI:2153262|PMID:10788794) MGI PMID:10788794 MGI:MGI:2153262 NCBI chr 9:4,098,881...4,124,417
Ensembl chr 9:4,101,050...4,123,896
JBrowse link
G ST6GALNAC5 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 ISO (MGI:MGI:5284811|PMID:12668675) BHF-UCL PMID:12668675 MGI:MGI:5284811 NCBI chr 6:69,706,717...69,867,760
Ensembl chr 6:69,709,114...69,867,648
JBrowse link
G ST6GALNAC6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 IEA Ensembl GO_REF:0000107 NCBI chr 9:55,520,083...55,533,205
Ensembl chr 9:55,520,109...55,532,055
JBrowse link
lactose biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4GALT1 beta-1,4-galactosyltransferase 1 IEA Ensembl GO_REF:0000107 NCBI chr11:50,223,880...50,276,745
Ensembl chr11:50,226,242...50,276,730
JBrowse link
G LALBA lactalbumin alpha IEA UniProt GO_REF:0000043 NCBI chr27:5,898,674...5,900,688
Ensembl chr27:5,874,879...5,900,686
JBrowse link
sucrose biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FBP1 fructose-bisphosphatase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:72,099,886...72,125,266
Ensembl chr 1:72,099,881...72,125,224
JBrowse link
G FBP2 fructose-bisphosphatase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:72,136,072...72,168,487
Ensembl chr 1:72,136,106...72,184,795
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16162
    metabolic process 10637
      primary metabolic process 9451
        carbohydrate metabolic process 565
          oligosaccharide metabolic process 41
            oligosaccharide biosynthetic process 14
              6-alpha-maltosylglucose biosynthetic process 0
              disaccharide biosynthetic process + 4
              lipooligosaccharide biosynthetic process + 0
              lipopolysaccharide core region biosynthetic process 0
              raffinose family oligosaccharide biosynthetic process + 0
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.