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ONTOLOGY REPORT - ANNOTATIONS


Term:oligosaccharide catabolic process
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Accession:GO:0009313 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages.
Synonyms:exact_synonym: oligosaccharide breakdown;   oligosaccharide catabolism;   oligosaccharide degradation
 narrow_synonym: multicellular organismal oligosaccharide catabolic process
 alt_id: GO:0051689


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oligosaccharide catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctbs chitobiase IDA RGD PMID:2751306 RGD:2301430 NCBI chr 2:252,305,874...252,320,387
Ensembl chr 2:252,305,874...252,320,387
JBrowse link
G Gm2a GM2 ganglioside activator ISO MGI:MGI:1861930 (MGI:MGI:1203907|PMID:9584189) RGD PMID:9584189 MGI:MGI:1203907 NCBI chr10:40,438,394...40,450,927
Ensembl chr10:40,438,356...40,450,930
JBrowse link
G Hexb hexosaminidase subunit beta ISO
IEA
MGI:MGI:1857438 (MGI:MGI:1331265|PMID:10021458), (MGI:MGI:3573807|PMID:15748167)
GO_REF:0000107
RGD
Ensembl
PMID:10021458, PMID:15748167 GO_REF:0000107, MGI:MGI:1331265, MGI:MGI:3573807 NCBI chr 2:27,983,925...28,003,260
Ensembl chr 2:27,984,117...28,003,186
JBrowse link
G Man2c1 mannosidase, alpha, class 2C, member 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:61,805,697...61,816,800
Ensembl chr 8:61,805,677...61,816,800
JBrowse link
G Neu1 neuraminidase 1 IEA
IBA
ISS
ISO
GO_REF:0000107
PMID:21873635
GO_REF:0000024
(PMID:8985184)
Ensembl
UniProt
RGD
PMID:8985184, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr20:4,610,995...4,615,258
Ensembl chr20:4,610,995...4,615,247
JBrowse link
G Neu2 neuraminidase 2 ISS
ISO
IBA
GO_REF:0000024
(MGI:MGI:1354405|PMID:10713120)
(PMID:14613940), (PMID:22228546)
PMID:21873635
UniProt
RGD
PMID:10713120, PMID:14613940, PMID:22228546, PMID:21873635 GO_REF:0000024, MGI:MGI:1354405, RGD:13792537 NCBI chr 9:94,702,095...94,724,903
Ensembl chr 9:94,702,129...94,724,902
JBrowse link
G Neu3 neuraminidase 3 ISO
IBA
(PMID:10861246)
PMID:21873635
RGD PMID:10861246, PMID:21873635 RGD:13792537 NCBI chr 1:164,803,574...164,814,777
Ensembl chr 1:164,803,574...164,814,651
JBrowse link
G Neu4 neuraminidase 4 ISO
IBA
(PMID:15213228)
PMID:21873635
RGD PMID:15213228, PMID:21873635 RGD:13792537 NCBI chr 9:101,284,902...101,290,558
Ensembl chr 9:101,284,902...101,290,558
JBrowse link
G NEWGENE_1308624 sialidase 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:101,003,455...101,008,365
Ensembl chr 9:101,005,082...101,008,170
JBrowse link
cellular oligosaccharide catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gba3 glucosylceramidase beta 3 ISO (PMID:26193330) RGD PMID:26193330 NCBI chr14:64,390,793...64,535,213
Ensembl chr14:64,390,793...64,535,170
JBrowse link
G Neu2 neuraminidase 2 IEA
ISO
GO_REF:0000107
(PMID:26193330)
Ensembl
RGD
PMID:26193330 GO_REF:0000107 NCBI chr 9:94,702,095...94,724,903
Ensembl chr 9:94,702,129...94,724,902
JBrowse link
trehalose catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Treh trehalase ISO (PMID:9427547) RGD PMID:9427547 NCBI chr 8:48,983,802...48,998,072
Ensembl chr 8:48,983,802...48,997,191
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    metabolic process 12256
      primary metabolic process 10901
        carbohydrate metabolic process 630
          oligosaccharide metabolic process 43
            oligosaccharide catabolic process 11
              6-alpha-maltosylglucose catabolic process 0
              cellodextrin catabolic process + 0
              cellooligosaccharide catabolic process + 0
              cellotriose catabolic process + 0
              cellular oligosaccharide catabolic process 2
              cyclodextrin catabolic process + 0
              disaccharide catabolic process + 1
              lipooligosaccharide catabolic process 0
              maltoheptaose catabolic process 0
              raffinose catabolic process + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.