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ONTOLOGY REPORT - ANNOTATIONS


Term:response to radiation
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Accession:GO:0009314 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation.
Comment:Note that 'radiation' refers to electromagnetic radiation of any wavelength.
Synonyms:exact_synonym: response to electromagnetic radiation stimulus;   response to radiation stimulus


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response to radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acan aggrecan IEP RGD PMID:19480974 RGD:2315755 NCBI chr 1:140,762,758...140,824,441
Ensembl chr 1:140,762,758...140,824,441
JBrowse link
G Angpt2 angiopoietin 2 IEP pulsed electromagnetic field RGD PMID:15208265 RGD:2314237 NCBI chr16:75,966,480...76,016,147
Ensembl chr16:75,966,352...76,016,195
JBrowse link
G App amyloid beta precursor protein IEP RGD PMID:26972535 RGD:13782153 NCBI chr11:24,425,013...24,641,872
Ensembl chr11:24,425,005...24,641,858
JBrowse link
G Aqp4 aquaporin 4 IEP RGD PMID:20137298 RGD:5490128 NCBI chr18:6,766,009...6,782,757
Ensembl chr18:6,765,945...6,782,996
JBrowse link
G Bace1 beta-secretase 1 IEP RGD PMID:26972535 RGD:13782153 NCBI chr 8:50,140,092...50,162,388
Ensembl chr 8:50,139,997...50,162,361
JBrowse link
G Bcl2l1 Bcl2-like 1 ISO MGI:MGI:2158303 (MGI:MGI:2677658|PMID:14517295) RGD PMID:14517295 MGI:MGI:2677658 NCBI chr 3:148,259,594...148,314,191
Ensembl chr 3:148,259,596...148,313,810
JBrowse link
G Cat catalase IEP RGD PMID:20698742, PMID:22237725 RGD:9068891, RGD:9479171 NCBI chr 3:93,379,872...93,412,058
Ensembl chr 3:93,379,874...93,412,058
JBrowse link
G Cckar cholecystokinin A receptor IEP RGD PMID:16472889 RGD:2313291 NCBI chr14:59,610,939...59,619,786
Ensembl chr14:59,611,434...59,619,783
JBrowse link
G Ccr4 C-C motif chemokine receptor 4 IEP RGD PMID:19084914 RGD:2306303 NCBI chr 8:122,530,152...122,535,959
Ensembl chr 8:122,530,624...122,532,070
JBrowse link
G Cdc25a cell division cycle 25A ISO
ISS
(PMID:21376736)
GO_REF:0000024
RGD
UniProt
PMID:21376736 GO_REF:0000024 NCBI chr 8:117,953,223...117,971,552
Ensembl chr 8:117,953,444...117,971,519
JBrowse link
G Col3a1 collagen type III alpha 1 chain ISO (PMID:14736764) RGD PMID:14736764 NCBI chr 9:52,023,295...52,059,221
Ensembl chr 9:52,023,295...52,059,217
JBrowse link
G Crp C-reactive protein IEP RGD PMID:24308182 RGD:8695929 NCBI chr13:91,080,448...91,081,358
Ensembl chr13:91,054,974...91,093,713
JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 IEP RGD PMID:19024651 RGD:2306569 NCBI chr 4:149,261,044...149,273,891
Ensembl chr 4:149,261,044...149,273,891
JBrowse link
G F11r F11 receptor IEP RGD PMID:20180397 RGD:7488942 NCBI chr13:89,826,272...89,850,151
Ensembl chr13:89,826,254...89,850,612
JBrowse link
G Fancg FA complementation group G ISO MGI:MGI:2183264 (MGI:MGI:2154029|PMID:11719385) RGD PMID:11719385 MGI:MGI:2154029 NCBI chr 5:58,448,060...58,456,416
Ensembl chr 5:58,448,822...58,455,819
JBrowse link
G Foxp3 forkhead box P3 IEP RGD PMID:30328796 RGD:38549363 NCBI chr  X:15,753,175...15,768,648
Ensembl chr  X:15,753,175...15,768,522
JBrowse link
G Hspa1a heat shock protein family A (Hsp70) member 1A IEP RGD PMID:18302488 RGD:7257605 NCBI chr20:4,875,834...4,881,751
Ensembl chr20:4,877,324...4,879,779
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 IEP RGD PMID:25632565 RGD:11354959 NCBI chr 3:13,838,304...13,842,763
Ensembl chr 3:13,838,304...13,842,762
JBrowse link
G Igf2 insulin-like growth factor 2 IEP RGD PMID:17630476 RGD:2311521 NCBI chr 1:215,828,102...215,839,081
Ensembl chr 1:215,828,102...215,846,911
JBrowse link
G Il18 interleukin 18 IEP RGD PMID:19955748 RGD:4889159 NCBI chr 8:55,009,666...55,016,286
Ensembl chr 8:54,993,859...55,016,299
JBrowse link
G Il1r1 interleukin 1 receptor type 1 IMP RGD PMID:19022353 RGD:8662898 NCBI chr 9:46,962,291...47,038,139
Ensembl chr 9:46,962,288...47,036,670
JBrowse link
G Itgb3 integrin subunit beta 3 IEP RGD PMID:20159792 RGD:2325788 NCBI chr10:92,667,869...92,783,413
Ensembl chr10:92,667,869...92,783,410
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit IDA RGD PMID:18439036 RGD:4890019 NCBI chr 5:114,011,184...114,014,277
Ensembl chr 5:114,011,189...114,014,277
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase ISO
IEP
MGI:MGI:1856266 (MGI:MGI:2668295|PMID:12833143) RGD PMID:12833143, PMID:17252991 MGI:MGI:2668295, RGD:12910767 NCBI chr14:35,072,131...35,149,638
Ensembl chr14:35,072,108...35,149,610
JBrowse link
G Krt13 keratin 13 IEP RGD PMID:17649822 RGD:2316549 NCBI chr10:88,032,130...88,036,040
Ensembl chr10:88,032,130...88,036,040
JBrowse link
G Lrp5 LDL receptor related protein 5 IEP RGD PMID:22704852 RGD:7240519 NCBI chr 1:218,816,833...218,920,147
Ensembl chr 1:218,816,841...218,920,094
JBrowse link
G Mbd4 methyl-CpG binding domain 4 DNA glycosylase ISO MGI:MGI:2183491 (MGI:MGI:2678630|PMID:14562041) RGD PMID:14562041 MGI:MGI:2678630 NCBI chr 4:147,744,673...147,756,462
Ensembl chr 4:147,746,186...147,756,294
JBrowse link
G Mir223 microRNA 223 IEP RGD PMID:31237865 RGD:25824937 NCBI chr  X:65,367,812...65,367,921
Ensembl chr  X:65,367,812...65,367,921
JBrowse link
G Mmp2 matrix metallopeptidase 2 IEP RGD PMID:19922364 RGD:2325703 NCBI chr19:15,542,771...15,570,589
Ensembl chr19:15,542,765...15,570,611
JBrowse link
G Mmp9 matrix metallopeptidase 9 IEP RGD PMID:17337891, PMID:20159792 RGD:1642044, RGD:2325788 NCBI chr 3:161,413,410...161,421,473
Ensembl chr 3:161,413,298...161,421,520
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO MGI:MGI:2447604 (MGI:MGI:2677658|PMID:14517295) RGD PMID:14517295 MGI:MGI:2677658 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link
G Ngf nerve growth factor IEP RGD PMID:19065562 RGD:2303800 NCBI chr 2:204,886,158...204,939,523
Ensembl chr 2:204,886,202...204,940,453
JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 IEP RGD PMID:17535653 RGD:4892305 NCBI chr18:31,728,373...32,704,022
Ensembl chr18:31,728,373...31,749,647
JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 IEP RGD PMID:21431457 RGD:5684342 NCBI chr 2:187,143,568...187,160,373
Ensembl chr 2:187,143,568...187,160,373
JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase ISO
ISS
(PMID:17148573)
GO_REF:0000024
RGD
UniProt
PMID:17148573 GO_REF:0000024 NCBI chr 4:145,282,828...145,289,367
Ensembl chr 4:145,282,797...145,289,326
JBrowse link
G Oprk1 opioid receptor, kappa 1 IEP RGD PMID:22337865 RGD:9831403 NCBI chr 5:13,742,655...13,760,460
Ensembl chr 5:13,744,658...13,760,305
JBrowse link
G Oprm1 opioid receptor, mu 1 IEP RGD PMID:22337865 RGD:9831403 NCBI chr 1:43,454,803...43,704,948
Ensembl chr 1:43,454,803...43,704,948
JBrowse link
G Penk proenkephalin IEP RGD PMID:8584889 RGD:9999370 NCBI chr 5:17,056,412...17,061,762
Ensembl chr 5:17,056,419...17,061,837
JBrowse link
G Plk3 polo-like kinase 3 ISO
ISS
(PMID:21376736)
GO_REF:0000024
RGD
UniProt
PMID:21376736 GO_REF:0000024 NCBI chr 5:135,997,725...136,002,900
Ensembl chr 5:135,997,725...136,002,900
JBrowse link
G Polh DNA polymerase eta IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:17,163,354...17,198,006
Ensembl chr 9:17,163,354...17,197,132
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 IEP RGD PMID:18606213 RGD:5135219 NCBI chr13:67,351,230...67,356,920
Ensembl chr13:67,351,087...67,359,335
JBrowse link
G Serpine2 serpin family E member 2 IEP RGD PMID:8373421 RGD:2317935 NCBI chr 9:85,560,852...85,629,410
Ensembl chr 9:85,560,863...85,626,094
JBrowse link
G Smc1a structural maintenance of chromosomes 1A IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:11877377)
Ensembl
UniProt
RGD
PMID:11877377 GO_REF:0000024, GO_REF:0000107 NCBI chr  X:21,710,976...21,755,708
Ensembl chr  X:21,711,019...21,755,525
JBrowse link
G Snai2 snail family transcriptional repressor 2 ISO MGI:MGI:2447176 (MGI:MGI:2668295|PMID:12833143) RGD PMID:12833143 MGI:MGI:2668295 NCBI chr11:90,404,421...90,406,730
Ensembl chr11:90,403,333...90,406,797
JBrowse link
G Sod2 superoxide dismutase 2 IEP RGD PMID:22780102 RGD:8158084 NCBI chr 1:47,914,757...47,921,587
Ensembl chr 1:47,914,759...47,921,587
JBrowse link
G Tgfb1 transforming growth factor, beta 1 IEP RGD PMID:11774400 RGD:2302113 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Tgfb2 transforming growth factor, beta 2 IEP RGD PMID:11774400 RGD:2302113 NCBI chr13:105,039,639...105,142,010
Ensembl chr13:105,039,853...105,141,030
JBrowse link
G Tnf tumor necrosis factor IEP RGD PMID:20458900 RGD:7394736 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
G Tnfrsf11a TNF receptor superfamily member 11A IEP RGD PMID:16752412 RGD:2302322 NCBI chr13:25,778,306...25,835,802
Ensembl chr13:25,778,317...25,835,957
JBrowse link
G Tnfsf11 TNF superfamily member 11 IEP RGD PMID:16752412 RGD:2302322 NCBI chr15:60,482,527...60,512,704
Ensembl chr15:60,482,527...60,512,704
JBrowse link
G Trpm7 transient receptor potential cation channel, subfamily M, member 7 IEP RGD PMID:16201261 RGD:5685001 NCBI chr 3:119,258,189...119,347,084
Ensembl chr 3:119,259,467...119,330,345
JBrowse link
G Txn1 thioredoxin 1 IEA
ISO
ISS
GO_REF:0000107
(PMID:11118054), (PMID:9108029)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:9108029, PMID:11118054 GO_REF:0000024, GO_REF:0000107 NCBI chr 5:75,049,735...75,057,731
Ensembl chr 5:75,049,747...75,057,752
JBrowse link
G Vim vimentin IEP RGD PMID:17649822 RGD:2316549 NCBI chr17:80,882,715...80,891,200
Ensembl chr17:80,882,666...80,891,212
JBrowse link
absorption of visible light term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rho rhodopsin ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 4:147,832,136...147,837,298
Ensembl chr 4:147,832,136...147,837,298
JBrowse link
adaptation of rhodopsin mediated signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rdh11 retinol dehydrogenase 11 ISO MGI:MGI:3586379 (MGI:MGI:3584215|PMID:15790565) RGD PMID:15790565 MGI:MGI:3584215 NCBI chr 6:102,356,498...102,372,618
Ensembl chr 6:102,356,492...102,372,611
JBrowse link
G Rs1 retinoschisin 1 ISO MGI:MGI:3056058 (MGI:MGI:3055638|PMID:15326152) RGD PMID:15326152 MGI:MGI:3055638 NCBI chr  X:35,749,957...35,777,243
Ensembl chr  X:35,749,957...35,777,243
JBrowse link
cellular response to gamma radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase ISO (PMID:16213212), (PMID:9925639) RGD PMID:9925639, PMID:16213212 NCBI chr 8:58,015,938...58,119,973
Ensembl chr 8:58,015,940...58,120,045
JBrowse link
G Atr ATR serine/threonine kinase ISO (PMID:9925639) RGD PMID:9925639 NCBI chr 8:103,673,578...103,770,886
Ensembl chr 8:103,673,411...103,770,947
JBrowse link
G Bcl2l1 Bcl2-like 1 ISO (MGI:MGI:3057092|PMID:15231831) RGD PMID:15231831 MGI:MGI:3057092 NCBI chr 3:148,259,594...148,314,191
Ensembl chr 3:148,259,596...148,313,810
JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A ISO (MGI:MGI:1354114|PMID:10710310) RGD PMID:10710310 MGI:MGI:1354114 NCBI chr20:6,348,422...6,358,864
Ensembl chr20:6,351,458...6,358,864
JBrowse link
G Chek2 checkpoint kinase 2 ISO MGI:MGI:2386905 (MGI:MGI:1354114|PMID:10710310) RGD PMID:10710310 MGI:MGI:1354114 NCBI chr12:51,845,574...51,878,098
Ensembl chr12:51,845,796...51,877,624
JBrowse link
G Cryab crystallin, alpha B ISO (PMID:23542032) RGD PMID:23542032 NCBI chr 8:55,178,543...55,182,546
Ensembl chr 8:55,178,289...55,182,545
JBrowse link
G Cyba cytochrome b-245 alpha chain IEP RGD PMID:18640264 RGD:2317861 NCBI chr19:55,249,634...55,257,824
Ensembl chr19:55,249,616...55,257,876
JBrowse link
G Ddias DNA damage-induced apoptosis suppressor ISO (MGI:MGI:3718924|PMID:17515607) RGD PMID:17515607 MGI:MGI:3718924 NCBI chr 1:157,675,754...157,700,064
Ensembl chr 1:157,675,765...157,700,064
JBrowse link
G Egr1 early growth response 1 ISO
IEA
(MGI:MGI:3830454|PMID:19057511)
GO_REF:0000107
RGD
Ensembl
PMID:19057511 GO_REF:0000107, MGI:MGI:3830454 NCBI chr18:27,657,903...27,660,101
Ensembl chr18:27,657,628...27,661,429
JBrowse link
G Elk1 ETS transcription factor ELK1 IDA RGD PMID:17949253 RGD:7488908 NCBI chr  X:1,287,875...1,304,822
Ensembl chr  X:1,297,099...1,304,822
JBrowse link
G Gtf2h5 general transcription factor IIH subunit 5 ISO MGI:MGI:5514340 (MGI:MGI:5506835|PMID:23637614) RGD PMID:23637614 MGI:MGI:5506835 NCBI chr 1:46,978,345...46,985,032
Ensembl chr 1:46,978,458...46,985,032
JBrowse link
G H2ax H2A.X variant histone IDA RGD PMID:17552875 RGD:8693710 NCBI chr 8:48,665,652...48,666,981
Ensembl chr 8:48,665,652...48,666,981
JBrowse link
G Hras HRas proto-oncogene, GTPase ISO (PMID:16213212) RGD PMID:16213212 NCBI chr 1:214,178,404...214,181,841
Ensembl chr 1:214,178,407...214,181,686
JBrowse link
G Hsf1 heat shock transcription factor 1 ISO (PMID:26359349) RGD PMID:26359349 NCBI chr 7:117,538,523...117,565,478
Ensembl chr 7:117,538,523...117,565,478
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 IEP RGD PMID:20470193 RGD:11354917 NCBI chr 3:13,838,304...13,842,763
Ensembl chr 3:13,838,304...13,842,762
JBrowse link
G Kdm1a lysine demethylase 1A ISO (PMID:24217620) RGD PMID:24217620 NCBI chr 5:154,909,003...154,965,171
Ensembl chr 5:154,909,003...154,965,171
JBrowse link
G Map3k20 mitogen-activated protein kinase kinase kinase 20 ISO (PMID:11836244) RGD PMID:11836244 NCBI chr 3:58,965,025...59,120,507
Ensembl chr 3:58,965,552...59,067,369
JBrowse link
G Mdm2 MDM2 proto-oncogene ISO (PMID:16213212) RGD PMID:16213212 NCBI chr 7:60,719,060...60,743,618
Ensembl chr 7:60,719,066...60,743,328
JBrowse link
G Nox4 NADPH oxidase 4 IEP RGD PMID:18640264 RGD:2317861 NCBI chr 1:150,796,359...150,976,186
Ensembl chr 1:150,797,084...150,976,194
JBrowse link
G Rad51 RAD51 recombinase IEP RGD PMID:9885240 RGD:9831175 NCBI chr 3:110,918,240...110,942,920
Ensembl chr 3:110,918,243...110,942,917
JBrowse link
G Rnf4 ring finger protein 4 IMP RGD PMID:22661230 RGD:9480235 NCBI chr14:81,658,400...81,679,756
Ensembl chr14:81,660,354...81,679,082
JBrowse link
G Rpl13a ribosomal protein L13A IEP RGD PMID:10483362 RGD:11036101 NCBI chr 1:101,120,325...101,123,401
Ensembl chr 1:101,120,325...101,123,402
JBrowse link
G Rpl26 ribosomal protein L26 ISO (PMID:16213212) RGD PMID:16213212 NCBI chr10:55,492,417...55,495,547
Ensembl chr10:55,492,404...55,496,012
JBrowse link
G Tlk2 tousled-like kinase 2 ISO (PMID:12660173) RGD PMID:12660173 NCBI chr10:93,410,181...93,507,277
Ensembl chr10:93,415,399...93,507,277
JBrowse link
G Tmem109 transmembrane protein 109 ISO
IBA
(PMID:23542032)
PMID:21873635
RGD PMID:23542032, PMID:21873635 RGD:13792537 NCBI chr 1:226,925,114...226,935,710
Ensembl chr 1:226,925,117...226,935,689
JBrowse link
G Tp53 tumor protein p53 ISO (MGI:MGI:1354114|PMID:10710310)
(PMID:16213212)
RGD PMID:10710310, PMID:16213212 MGI:MGI:1354114 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
G Trex1 three prime repair exonuclease 1 ISO (MGI:MGI:3818783|PMID:18045533) RGD PMID:18045533 MGI:MGI:3818783 NCBI chr 8:117,796,127...117,797,427
Ensembl chr 8:117,796,128...117,797,427
JBrowse link
G Tspyl5 TSPY-like 5 ISO (PMID:20079711) RGD PMID:20079711 NCBI chr 7:72,323,764...72,328,228
Ensembl chr 7:72,326,896...72,328,128
JBrowse link
G Wrn WRN RecQ like helicase ISO (PMID:21639834) RGD PMID:21639834 NCBI chr16:62,483,773...62,619,018
Ensembl chr16:62,483,761...62,615,375
JBrowse link
G Xrcc5 X-ray repair cross complementing 5 ISO
IBA
(PMID:26359349)
PMID:21873635
RGD PMID:26359349, PMID:21873635 RGD:13792537 NCBI chr 9:79,659,275...79,748,050
Ensembl chr 9:79,659,251...79,748,078
JBrowse link
G Xrcc6 X-ray repair cross complementing 6 ISO
IBA
(PMID:26359349)
PMID:21873635
RGD PMID:26359349, PMID:21873635 RGD:13792537 NCBI chr 7:123,259,881...123,280,613
Ensembl chr 7:123,259,761...123,280,612
JBrowse link
G Yap1 Yes1 associated transcriptional regulator ISO
ISS
(PMID:18280240)
GO_REF:0000024
RGD
UniProt
PMID:18280240 GO_REF:0000024 NCBI chr 8:6,133,014...6,204,240
Ensembl chr 8:6,135,493...6,203,579
JBrowse link
G Zmpste24 zinc metallopeptidase STE24 ISO MGI:MGI:2180033 (MGI:MGI:3583382|PMID:15980864) RGD PMID:15980864 MGI:MGI:3583382 NCBI chr 5:139,982,404...140,015,541
Ensembl chr 5:139,983,680...140,015,541
JBrowse link
cellular response to high light intensity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt2 AKT serine/threonine kinase 2 ISO
IEA
MGI:MGI:2158456 (MGI:MGI:3695811|PMID:17202487)
GO_REF:0000107
RGD
Ensembl
PMID:17202487 GO_REF:0000107, MGI:MGI:3695811 NCBI chr 1:84,400,939...84,451,223
Ensembl chr 1:84,411,726...84,450,162
JBrowse link
cellular response to ionizing radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07067300.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 9:38,799,881...38,800,143 JBrowse link
G AC134087.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 5:150,994,665...150,994,913 JBrowse link
G Bbc3 Bcl-2 binding component 3 ISO MGI:MGI:1096393|MGI:MGI:98834 (MGI:MGI:3690827|PMID:16286009) RGD PMID:16286009 MGI:MGI:3690827 NCBI chr 1:78,261,491...78,267,802 JBrowse link
G Blm BLM RecQ like helicase ISO (PMID:23509288) RGD PMID:23509288 NCBI chr 1:142,246,773...142,332,616
Ensembl chr 1:142,246,790...142,332,588
JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A ISO (PMID:20160708) RGD PMID:20160708 NCBI chr20:6,348,422...6,358,864
Ensembl chr20:6,351,458...6,358,864
JBrowse link
G Clock clock circadian regulator ISO
IEA
(PMID:21659603)
GO_REF:0000107
RGD
Ensembl
PMID:21659603 GO_REF:0000107 NCBI chr14:34,418,226...34,502,218
Ensembl chr14:34,446,616...34,502,218
JBrowse link
G Ect2 epithelial cell transforming 2 ISO (PMID:21373644) RGD PMID:21373644 NCBI chr 2:112,769,385...112,831,476
Ensembl chr 2:112,769,385...112,831,476
JBrowse link
G Eef1d eukaryotic translation elongation factor 1 delta ISO (PMID:8168075) RGD PMID:8168075 NCBI chr 7:116,928,264...116,942,981
Ensembl chr 7:116,928,265...116,936,674
JBrowse link
G Fbxo4 F-box protein 4 ISO (MGI:MGI:5299398|PMID:21911473) RGD PMID:21911473 MGI:MGI:5299398 NCBI chr 2:53,797,954...53,811,134
Ensembl chr 2:53,797,954...53,811,134
JBrowse link
G Fignl1 fidgetin-like 1 ISO
ISS
(PMID:23754376)
GO_REF:0000024
RGD
UniProt
PMID:23754376 GO_REF:0000024 NCBI chr14:91,895,902...91,904,474
Ensembl chr14:91,895,909...91,904,433
JBrowse link
G Gadd45a growth arrest and DNA-damage-inducible, alpha ISO
IEA
(PMID:20160708)
GO_REF:0000107
RGD
Ensembl
PMID:20160708 GO_REF:0000107 NCBI chr 4:97,782,512...97,784,814
Ensembl chr 4:97,782,512...97,784,842
JBrowse link
G Grb2 growth factor receptor bound protein 2 ISO (PMID:20160708) RGD PMID:20160708 NCBI chr10:104,193,953...104,263,071
Ensembl chr10:104,193,955...104,263,071
JBrowse link
G Hus1 HUS1 checkpoint clamp component ISO (PMID:21659603) RGD PMID:21659603 NCBI chr14:89,194,086...89,208,825
Ensembl chr14:89,194,092...89,208,825
JBrowse link
G Ino80 INO80 complex ATPase subunit ISO (PMID:20687897) RGD PMID:20687897 NCBI chr 3:111,186,371...111,266,542
Ensembl chr 3:111,187,711...111,266,542
JBrowse link
G Ints7 integrator complex subunit 7 ISO (PMID:21659603) RGD PMID:21659603 NCBI chr13:110,257,571...110,310,413
Ensembl chr13:110,257,571...110,310,413
JBrowse link
G Itgb1 integrin subunit beta 1 IEP RGD PMID:19714308 RGD:2312872 NCBI chr19:61,677,512...61,725,537
Ensembl chr19:61,677,542...61,725,535
JBrowse link
G Itgb6 integrin subunit beta 6 ISO (MGI:MGI:3842254|PMID:17916808) RGD PMID:17916808 MGI:MGI:3842254 NCBI chr 3:46,652,624...46,775,362
Ensembl chr 3:46,652,623...46,726,958
JBrowse link
G Kdm4d lysine demethylase 4D ISO (PMID:24550317) RGD PMID:24550317 NCBI chr 8:12,968,192...12,993,651
Ensembl chr 8:13,511,805...13,513,337
JBrowse link
G Lig4 DNA ligase 4 ISO UniProtKB:G5EGA3 (PMID:29463814) RGD PMID:29463814 NCBI chr16:85,331,771...85,339,496
Ensembl chr16:85,331,866...85,337,769
JBrowse link
G Mapk14 mitogen activated protein kinase 14 ISO
IEA
(PMID:20160708)
GO_REF:0000107
RGD
Ensembl
PMID:20160708 GO_REF:0000107 NCBI chr20:5,933,290...5,995,137
Ensembl chr20:5,933,303...5,995,137
JBrowse link
G Mfn2 mitofusin 2 IEP RGD PMID:26415228 RGD:13204741 NCBI chr 5:164,684,244...164,715,414
Ensembl chr 5:164,684,509...164,714,145
JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase IEP RGD PMID:9780001 RGD:2316946 NCBI chr 1:209,237,255...209,464,189
Ensembl chr 1:209,237,233...209,464,190
JBrowse link
G Nampt nicotinamide phosphoribosyltransferase IEP RGD PMID:27681750 RGD:13781886 NCBI chr 6:52,122,085...52,156,473
Ensembl chr 6:52,122,085...52,156,472
JBrowse link
G Net1 neuroepithelial cell transforming 1 ISO (PMID:21373644) RGD PMID:21373644 NCBI chr17:69,991,786...70,020,977
Ensembl chr17:70,010,794...70,020,982
JBrowse link
G Rad1 RAD1 checkpoint DNA exonuclease ISO (PMID:21659603) RGD PMID:21659603 NCBI chr 2:60,461,513...60,469,646
Ensembl chr 2:60,461,551...60,469,685
JBrowse link
G Rad51 RAD51 recombinase ISO (PMID:23509288), (PMID:23754376) RGD PMID:23509288, PMID:23754376 NCBI chr 3:110,918,240...110,942,920
Ensembl chr 3:110,918,243...110,942,917
JBrowse link
G Rad51ap1 RAD51 associated protein 1 ISO (PMID:23754376) RGD PMID:23754376 NCBI chr 4:159,469,803...159,482,869
Ensembl chr 4:159,469,804...159,482,869
JBrowse link
G Rad9a RAD9 checkpoint clamp component A ISO
IBA
(PMID:21659603)
PMID:21873635
RGD PMID:21659603, PMID:21873635 RGD:13792537 NCBI chr 1:219,443,347...219,450,574
Ensembl chr 1:219,444,092...219,450,451
JBrowse link
G Rad9b RAD9 checkpoint clamp component B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:39,699,076...39,731,218
Ensembl chr12:39,699,181...39,729,516
JBrowse link
G RGD1561465 similar to RIKEN cDNA 2900010J23 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:150,994,650...150,995,029 JBrowse link
G Rhno1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 ISO (PMID:21659603) RGD PMID:21659603 NCBI chr 4:161,679,674...161,685,060
Ensembl chr 4:161,680,027...161,681,660
JBrowse link
G Rhob ras homolog family member B ISO
ISS
(PMID:21373644)
GO_REF:0000024
RGD
UniProt
PMID:21373644 GO_REF:0000024 NCBI chr 6:33,689,127...33,691,301
Ensembl chr 6:33,689,127...33,691,301
JBrowse link
G Rpl26 ribosomal protein L26 ISO (MGI:MGI:5882892|PMID:16213212) RGD PMID:16213212 MGI:MGI:5882892 NCBI chr10:55,492,417...55,495,547
Ensembl chr10:55,492,404...55,496,012
JBrowse link
G Sirt1 sirtuin 1 ISO (MGI:MGI:5297784|PMID:17612497) RGD PMID:17612497 MGI:MGI:5297784 NCBI chr20:26,831,971...26,851,587
Ensembl chr20:26,833,357...26,852,199
JBrowse link
G Snai2 snail family transcriptional repressor 2 ISO MGI:MGI:2181667|MGI:MGI:98834 (MGI:MGI:3690827|PMID:16286009) RGD PMID:16286009 MGI:MGI:3690827 NCBI chr11:90,404,421...90,406,730
Ensembl chr11:90,403,333...90,406,797
JBrowse link
G Spidr scaffold protein involved in DNA repair ISO (PMID:23509288), (PMID:23754376) RGD PMID:23509288, PMID:23754376 NCBI chr11:89,009,931...89,260,361
Ensembl chr11:89,009,931...89,260,297
JBrowse link
G Swi5 SWI5 homologous recombination repair protein ISO
IBA
ISS
(PMID:23754376)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:23754376, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 3:11,307,981...11,317,049
Ensembl chr 3:11,307,981...11,317,049
JBrowse link
G Tank TRAF family member-associated NFKB activator ISO (PMID:25861989) RGD PMID:25861989 NCBI chr 3:47,439,007...47,515,706
Ensembl chr 3:47,439,076...47,515,700
JBrowse link
G Tgfb1 transforming growth factor, beta 1 IEP
ISO
MGI:MGI:3513111 (MGI:MGI:3842254|PMID:17916808) RGD PMID:17916808, PMID:25600523 MGI:MGI:3842254, RGD:11073671 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Tnks1bp1 tankyrase 1 binding protein 1 ISO (PMID:25749521) RGD PMID:25749521 NCBI chr 3:72,458,520...72,483,206
Ensembl chr 3:72,460,889...72,483,217
JBrowse link
G Tp53 tumor protein p53 ISO (PMID:20160708)
MGI:MGI:1096393|MGI:MGI:2181667 (MGI:MGI:3690827|PMID:16286009), (MGI:MGI:5882892|PMID:16213212)
RGD PMID:16213212, PMID:16286009, PMID:20160708 MGI:MGI:3690827, MGI:MGI:5882892 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
cellular response to light stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crb1 crumbs cell polarity complex component 1 ISO (MGI:MGI:3696487|PMID:17234588) RGD PMID:17234588 MGI:MGI:3696487 NCBI chr13:56,270,519...56,462,893
Ensembl chr13:56,270,781...56,462,834
JBrowse link
G Gpr88 G-protein coupled receptor 88 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:219,258,346...219,263,819
Ensembl chr 2:219,258,347...219,262,901
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha IEP RGD PMID:17475674 RGD:9068879 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052
JBrowse link
G Kcne1 potassium voltage-gated channel subfamily E regulatory subunit 1 IEP RGD PMID:24202060 RGD:12910722 NCBI chr11:32,498,260...32,511,202
Ensembl chr11:32,498,261...32,508,420
JBrowse link
G Opn1mw opsin 1, medium wave sensitive IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:156,569,683...156,589,907
Ensembl chr  X:156,569,683...156,589,907
JBrowse link
G Opn1sw opsin 1, short wave sensitive IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:56,653,840...56,656,980
Ensembl chr 4:56,653,844...56,656,980
JBrowse link
G Opn3 opsin 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:93,716,481...93,746,994
Ensembl chr13:93,716,481...93,746,994
JBrowse link
G Opn4 opsin 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:10,943,353...10,966,602
Ensembl chr16:10,943,341...10,952,549
JBrowse link
G Opn5 opsin 5 ISO
IBA
(MGI:MGI:6376341|PMID:31607531)
PMID:21873635
RGD PMID:31607531, PMID:21873635 MGI:MGI:6376341, RGD:13792537 NCBI chr 9:21,045,457...21,092,517
Ensembl chr 9:21,045,457...21,093,172
JBrowse link
G Rgr retinal G protein coupled receptor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:14,286,323...14,300,972
Ensembl chr16:14,286,323...14,300,951
JBrowse link
G Rho rhodopsin ISO
IBA
IEA
(MGI:MGI:4849309|PMID:21052544)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:21052544, PMID:21873635 GO_REF:0000107, MGI:MGI:4849309, RGD:13792537 NCBI chr 4:147,832,136...147,837,298
Ensembl chr 4:147,832,136...147,837,298
JBrowse link
G Rp1 RP1, axonemal microtubule associated ISO (MGI:MGI:4849309|PMID:21052544) RGD PMID:21052544 MGI:MGI:4849309 NCBI chr 5:15,005,028...15,060,508
Ensembl chr 5:15,043,955...15,060,508
JBrowse link
G Rpgr retinitis pigmentosa GTPase regulator ISO MGI:MGI:2386674 (MGI:MGI:1354839|PMID:10725384) RGD PMID:10725384 MGI:MGI:1354839 NCBI chr  X:14,271,012...14,331,745
Ensembl chr  X:14,271,017...14,331,486
JBrowse link
G Rrh retinal pigment epithelium derived rhodopsin homolog IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:235,237,422...235,250,474
Ensembl chr 2:235,237,414...235,249,575
JBrowse link
G Trpm1 transient receptor potential cation channel, subfamily M, member 1 IEA
ISO
GO_REF:0000107
MGI:MGI:4421441 (MGI:MGI:4398796|PMID:19861548), (MGI:MGI:4420740|PMID:19966281), (MGI:MGI:4849309|PMID:21052544)
(PMID:19896109)
Ensembl
RGD
PMID:19861548, PMID:19896109, PMID:19966281, PMID:21052544 GO_REF:0000107, MGI:MGI:4398796, MGI:MGI:4420740, MGI:MGI:4849309 NCBI chr 1:124,983,391...125,101,759
Ensembl chr 1:124,983,452...125,099,573
JBrowse link
cellular response to radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hsf1 heat shock transcription factor 1 IDA microwave RGD PMID:21241601 RGD:10403031 NCBI chr 7:117,538,523...117,565,478
Ensembl chr 7:117,538,523...117,565,478
JBrowse link
G Irs1 insulin receptor substrate 1 IEP RGD PMID:17427956 RGD:10045897 NCBI chr 9:88,033,668...88,086,488
Ensembl chr 9:88,033,668...88,086,488
JBrowse link
G Mtch2 mitochondrial carrier 2 ISO MGI:MGI:2449949|MGI:MGI:5566664 (MGI:MGI:5662300|PMID:26219591) RGD PMID:26219591 MGI:MGI:5662300 NCBI chr 3:79,678,141...79,695,356
Ensembl chr 3:79,678,201...79,694,006
JBrowse link
G Nsmce3 NSE3 homolog, SMC5-SMC6 complex component ISO (PMID:27427983) RGD PMID:27427983 NCBI chr 1:125,663,987...125,665,314 JBrowse link
cellular response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 ISO
ISS
(PMID:19424603)
GO_REF:0000024
RGD
UniProt
PMID:19424603 GO_REF:0000024 NCBI chr 4:85,551,503...85,563,683
Ensembl chr 4:85,551,502...85,569,360
JBrowse link
G Atf4 activating transcription factor 4 ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 7:121,480,723...121,482,781
Ensembl chr 7:121,480,723...121,482,772
JBrowse link
G Atr ATR serine/threonine kinase ISO (PMID:9925639) RGD PMID:9925639 NCBI chr 8:103,673,578...103,770,886
Ensembl chr 8:103,673,411...103,770,947
JBrowse link
G Aurkb aurora kinase B ISO
ISS
(PMID:20959462)
GO_REF:0000024
RGD
UniProt
PMID:20959462 GO_REF:0000024 NCBI chr10:55,625,860...55,632,399
Ensembl chr10:55,626,741...55,634,991
JBrowse link
G Bak1 BCL2-antagonist/killer 1 ISO (PMID:15901672)
(MGI:MGI:3689797|PMID:15901672)
RGD PMID:15901672 MGI:MGI:3689797 NCBI chr20:5,609,620...5,618,899
Ensembl chr20:5,609,625...5,618,260
JBrowse link
G Bax BCL2 associated X, apoptosis regulator ISO
IEA
MGI:MGI:98834 (MGI:MGI:3042308|PMID:14963330)
GO_REF:0000107
RGD
Ensembl
PMID:14963330 GO_REF:0000107, MGI:MGI:3042308 NCBI chr 1:101,451,801...101,457,207
Ensembl chr 1:101,451,802...101,457,207
JBrowse link
G Bmf Bcl2 modifying factor ISO (PMID:23629966)
(MGI:MGI:5490676|PMID:23629966)
RGD PMID:23629966 MGI:MGI:5490676 NCBI chr 3:110,303,515...110,324,125
Ensembl chr 3:110,306,067...110,324,084
JBrowse link
G Casp9 caspase 9 ISO (PMID:15657060) RGD PMID:15657060 NCBI chr 5:160,356,211...160,373,774
Ensembl chr 5:160,355,833...160,373,778
JBrowse link
G Cdc25a cell division cycle 25A IEA
ISO
GO_REF:0000107
(PMID:19966869)
Ensembl
RGD
PMID:19966869 GO_REF:0000107 NCBI chr 8:117,953,223...117,971,552
Ensembl chr 8:117,953,444...117,971,519
JBrowse link
G Cops9 COP9 signalosome subunit 9 ISO (PMID:26456823) RGD PMID:26456823 NCBI chr 9:99,813,332...99,818,262
Ensembl chr 9:99,813,332...99,818,262
JBrowse link
G Crebbp CREB binding protein IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:24939902)
Ensembl
UniProt
RGD
PMID:24939902 GO_REF:0000024, GO_REF:0000107 NCBI chr10:11,590,994...11,721,039
Ensembl chr10:11,595,044...11,721,039
JBrowse link
G Ddias DNA damage-induced apoptosis suppressor ISO (MGI:MGI:3718924|PMID:17515607) RGD PMID:17515607 MGI:MGI:3718924 NCBI chr 1:157,675,754...157,700,064
Ensembl chr 1:157,675,765...157,700,064
JBrowse link
G Dhx36 DEAH-box helicase 36 ISS
ISO
GO_REF:0000024
(PMID:27940037)
UniProt
RGD
PMID:27940037 GO_REF:0000024 NCBI chr 2:152,785,844...152,824,549
Ensembl chr 2:152,785,844...152,824,547
JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 ISO (MGI:MGI:5700311|PMID:12176355) RGD PMID:12176355 MGI:MGI:5700311 NCBI chr 3:110,159,624...110,245,382
Ensembl chr 3:110,159,708...110,249,217
JBrowse link
G Eif2s1 eukaryotic translation initiation factor 2 subunit alpha ISO
ISS
(MGI:MGI:5700311|PMID:12176355)
GO_REF:0000024
RGD
UniProt
PMID:12176355 GO_REF:0000024, MGI:MGI:5700311 NCBI chr 6:102,048,372...102,073,041
Ensembl chr 6:102,048,372...102,073,041
JBrowse link
G Ep300 E1A binding protein p300 ISO (PMID:24939902) RGD PMID:24939902 NCBI chr 7:122,818,194...122,889,055
Ensembl chr 7:122,818,975...122,861,296
JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit ISO UniProtKB:Q15554 (PMID:17055345) RGD PMID:17055345 NCBI chr10:2,010,140...2,037,953
Ensembl chr10:2,010,648...2,037,891
JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 ISO (PMID:17873522) RGD PMID:17873522 NCBI chr 2:184,230,191...184,309,805
Ensembl chr 2:184,231,260...184,309,664
JBrowse link
G Fmr1 FMRP translational regulator 1 ISO
ISS
(MGI:MGI:5602914|PMID:24813610)
GO_REF:0000024
RGD
UniProt
PMID:24813610 GO_REF:0000024, MGI:MGI:5602914 NCBI chr  X:154,684,924...154,722,369
Ensembl chr  X:154,684,935...154,722,314
JBrowse link
G Ino80 INO80 complex ATPase subunit ISO (PMID:18026119) RGD PMID:18026119 NCBI chr 3:111,186,371...111,266,542
Ensembl chr 3:111,187,711...111,266,542
JBrowse link
G Kdm1a lysine demethylase 1A ISO (PMID:24217620) RGD PMID:24217620 NCBI chr 5:154,909,003...154,965,171
Ensembl chr 5:154,909,003...154,965,171
JBrowse link
G Mapk13 mitogen activated protein kinase 13 IEA
ISO
GO_REF:0000107
(PMID:9218798)
Ensembl
RGD
PMID:9218798 GO_REF:0000107 NCBI chr20:6,018,374...6,027,467
Ensembl chr20:6,018,374...6,027,473
JBrowse link
G Mapk9 mitogen-activated protein kinase 9 IMP RGD PMID:8875991 RGD:2304246 NCBI chr10:35,333,859...35,374,364
Ensembl chr10:35,333,859...35,374,355
JBrowse link
G Mettl3 methyltransferase-like 3 ISO (PMID:28297716) RGD PMID:28297716 NCBI chr15:28,710,299...28,721,491
Ensembl chr15:28,710,300...28,721,127
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO (PMID:17873522) RGD PMID:17873522 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link
G N4bp1 Nedd4 binding protein 1 ISO (PMID:17592138)
(MGI:MGI:3829128|PMID:17592138)
RGD PMID:17592138 MGI:MGI:3829128 NCBI chr19:21,218,123...21,268,539
Ensembl chr19:21,218,465...21,266,964
JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase ISO (PMID:17996703) RGD PMID:17996703 NCBI chr 8:79,323,408...79,408,842
Ensembl chr 8:79,323,408...79,408,833
JBrowse link
G Nfatc4 nuclear factor of activated T-cells 4 ISO MGI:MGI:97583 (MGI:MGI:3709926|PMID:17242187) RGD PMID:17242187 MGI:MGI:3709926 NCBI chr15:34,493,163...34,502,238
Ensembl chr15:34,493,138...34,504,326
JBrowse link
G Noc2l NOC2-like nucleolar associated transcriptional repressor ISO (PMID:20959462) RGD PMID:20959462 NCBI chr 5:173,659,796...173,672,699
Ensembl chr 5:173,660,921...173,672,459
JBrowse link
G Npm1 nucleophosmin 1 ISO (PMID:19160485) RGD PMID:19160485 NCBI chr10:18,080,949...18,091,062
Ensembl chr10:18,080,950...18,090,950
JBrowse link
G Nsmce3 NSE3 homolog, SMC5-SMC6 complex component ISO (PMID:27427983) RGD PMID:27427983 NCBI chr 1:125,663,987...125,665,314 JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 ISO (PMID:24289924) RGD PMID:24289924 NCBI chr13:98,857,255...98,889,444
Ensembl chr13:98,857,177...98,889,716
JBrowse link
G Pbk PDZ binding kinase ISO MGI:MGI:5293435 (MGI:MGI:5293269|PMID:21715333) RGD PMID:21715333 MGI:MGI:5293269 NCBI chr15:42,489,253...42,500,377
Ensembl chr15:42,489,377...42,500,395
JBrowse link
G Pcna proliferating cell nuclear antigen IEP
ISS
ISO
GO_REF:0000024
(PMID:24939902)
UniProt
RGD
PMID:24939902, PMID:8905661 GO_REF:0000024, RGD:10448977 NCBI chr 3:124,880,698...124,884,570
Ensembl chr 3:124,880,698...124,884,570
JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 ISO MGI:MGI:103296|MGI:MGI:2149414 (MGI:MGI:3709926|PMID:17242187) RGD PMID:17242187 MGI:MGI:3709926 NCBI chr 2:31,742,326...31,826,882
Ensembl chr 2:31,745,088...31,826,867
JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit ISO
ISS
(PMID:24939902)
GO_REF:0000024
RGD
UniProt
PMID:24939902 GO_REF:0000024 NCBI chr 1:100,538,066...100,554,105
Ensembl chr 1:100,537,900...100,554,488
JBrowse link
G Polk DNA polymerase kappa ISO (PMID:28297716) RGD PMID:28297716 NCBI chr 2:27,305,718...27,364,906
Ensembl chr 2:27,305,728...27,364,906
JBrowse link
G Ppp1r15a protein phosphatase 1, regulatory subunit 15A IEP RGD PMID:9811446 RGD:9999409 NCBI chr 1:101,511,899...101,515,043
Ensembl chr 1:101,511,901...101,514,974
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 IEP RGD PMID:22306367 RGD:5688265 NCBI chr13:67,351,230...67,356,920
Ensembl chr13:67,351,087...67,359,335
JBrowse link
G Ptn pleiotrophin IEP RGD PMID:17925408 RGD:10044023 NCBI chr 4:64,239,156...64,330,996
Ensembl chr 4:64,239,158...64,330,996
JBrowse link
G Ptprk protein tyrosine phosphatase, receptor type, K ISO (PMID:16849327) RGD PMID:16849327 NCBI chr 1:17,445,052...18,058,266
Ensembl chr 1:17,446,417...18,058,055
JBrowse link
G Rhbdd1 rhomboid domain containing 1 ISO
ISS
(MGI:MGI:5430884|PMID:19358743)
GO_REF:0000024
RGD
UniProt
PMID:19358743 GO_REF:0000024, MGI:MGI:5430884 NCBI chr 9:88,110,731...88,229,462
Ensembl chr 9:88,110,731...88,229,479
JBrowse link
G Rhno1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 ISO (PMID:21659603) RGD PMID:21659603 NCBI chr 4:161,679,674...161,685,060
Ensembl chr 4:161,680,027...161,681,660
JBrowse link
G Rnf168 ring finger protein 168 ISO (MGI:MGI:5562615|PMID:24217620) RGD PMID:24217620 MGI:MGI:5562615 NCBI chr11:71,721,242...71,743,421
Ensembl chr11:71,721,250...71,743,421
JBrowse link
G Rpl26 ribosomal protein L26 ISO (PMID:16213212) RGD PMID:16213212 NCBI chr10:55,492,417...55,495,547
Ensembl chr10:55,492,404...55,496,012
JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 ISO (PMID:18026119) RGD PMID:18026119 NCBI chr 1:101,413,766...101,426,970
Ensembl chr 1:101,413,766...101,426,852
JBrowse link
G Sde2 SDE2 telomere maintenance homolog IEA
ISO
GO_REF:0000107
(PMID:27906959)
Ensembl
RGD
PMID:27906959 GO_REF:0000107 NCBI chr13:99,136,921...99,153,187
Ensembl chr13:99,136,871...99,153,181
JBrowse link
G Taf1 TATA-box binding protein associated factor 1 ISO (PMID:24289924) RGD PMID:24289924 NCBI chr  X:71,412,291...71,486,456
Ensembl chr  X:71,412,289...71,485,085
JBrowse link
G Tmem161a transmembrane protein 161A ISO (PMID:16551573) RGD PMID:16551573 NCBI chr16:20,985,841...20,996,351
Ensembl chr16:20,986,687...20,994,379
JBrowse link
G Tp53 tumor protein p53 ISO (PMID:16213212), (PMID:23629966)
MGI:MGI:99702 (MGI:MGI:3042308|PMID:14963330), (MGI:MGI:5490676|PMID:23629966)
RGD PMID:14963330, PMID:16213212, PMID:23629966 MGI:MGI:3042308, MGI:MGI:5490676 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
G Tp53inp1 tumor protein p53 inducible nuclear protein 1 ISO
IEA
(MGI:MGI:2153600|PMID:11557757)
GO_REF:0000107
RGD
Ensembl
PMID:11557757 GO_REF:0000107, MGI:MGI:2153600 NCBI chr 5:24,402,895...24,419,651
Ensembl chr 5:24,410,863...24,416,888
JBrowse link
G Trex1 three prime repair exonuclease 1 ISO (MGI:MGI:5014018|PMID:20511593) RGD PMID:20511593 MGI:MGI:5014018 NCBI chr 8:117,796,127...117,797,427
Ensembl chr 8:117,796,128...117,797,427
JBrowse link
G Triap1 TP53 regulated inhibitor of apoptosis 1 ISO (PMID:15735003) RGD PMID:15735003 NCBI chr12:46,987,404...46,989,906
Ensembl chr12:46,987,404...46,989,897
Ensembl chr12:46,987,404...46,989,897
JBrowse link
G Usp28 ubiquitin specific peptidase 28 IEA
ISO
GO_REF:0000107
(PMID:17873522)
Ensembl
RGD
PMID:17873522 GO_REF:0000107 NCBI chr 8:53,295,188...53,355,572
Ensembl chr 8:53,295,222...53,355,572
JBrowse link
G Usp47 ubiquitin specific peptidase 47 ISO (MGI:MGI:4839431|PMID:19966869) RGD PMID:19966869 MGI:MGI:4839431 NCBI chr 1:176,854,589...176,937,763
Ensembl chr 1:176,854,653...176,937,763
JBrowse link
G Yy1 YY1 transcription factor ISO (PMID:18026119) RGD PMID:18026119 NCBI chr 6:132,702,443...132,726,848
Ensembl chr 6:132,702,448...132,727,046
JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 ISO (PMID:24657165) RGD PMID:24657165 NCBI chr 6:99,401,775...99,425,739
Ensembl chr 6:99,402,360...99,424,019
JBrowse link
cellular response to UV-A term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cers1 ceramide synthase 1 ISO (PMID:19800881) RGD PMID:19800881 NCBI chr16:20,845,580...20,860,789
Ensembl chr16:20,845,576...20,860,789
JBrowse link
G Mme membrane metallo-endopeptidase ISO
ISS
(PMID:20876573)
GO_REF:0000024
RGD
UniProt
PMID:20876573 GO_REF:0000024 NCBI chr 2:153,799,203...153,880,910
Ensembl chr 2:153,803,349...153,880,738
JBrowse link
G Mmp1 matrix metallopeptidase 1 ISO (PMID:31380578) RGD PMID:31380578 NCBI chr 8:5,703,206...5,723,593
Ensembl chr 8:5,703,206...5,723,591
JBrowse link
G Mmp2 matrix metallopeptidase 2 ISO
ISS
IEA
(PMID:31380578)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:31380578 GO_REF:0000024, GO_REF:0000107 NCBI chr19:15,542,771...15,570,589
Ensembl chr19:15,542,765...15,570,611
JBrowse link
G Mmp3 matrix metallopeptidase 3 ISO
ISS
(PMID:31380578)
GO_REF:0000024
RGD
UniProt
PMID:31380578 GO_REF:0000024 NCBI chr 8:5,676,608...5,698,579
Ensembl chr 8:5,676,665...5,698,579
JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO
IEA
(PMID:31380578)
GO_REF:0000107
RGD
Ensembl
PMID:31380578 GO_REF:0000107 NCBI chr 3:161,413,410...161,421,473
Ensembl chr 3:161,413,298...161,421,520
JBrowse link
G Opn1sw opsin 1, short wave sensitive ISO
ISS
IEA
(PMID:31380578)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:31380578 GO_REF:0000024, GO_REF:0000107 NCBI chr 4:56,653,840...56,656,980
Ensembl chr 4:56,653,844...56,656,980
JBrowse link
G Opn3 opsin 3 ISO
IEA
(PMID:31380578)
GO_REF:0000107
RGD
Ensembl
PMID:31380578 GO_REF:0000107 NCBI chr13:93,716,481...93,746,994
Ensembl chr13:93,716,481...93,746,994
JBrowse link
G Opn5 opsin 5 ISO
IEA
(PMID:31380578)
GO_REF:0000107
RGD
Ensembl
PMID:31380578 GO_REF:0000107 NCBI chr 9:21,045,457...21,092,517
Ensembl chr 9:21,045,457...21,093,172
JBrowse link
G Ppid peptidylprolyl isomerase D ISO
ISS
(PMID:23220213)
GO_REF:0000024
RGD
UniProt
PMID:23220213 GO_REF:0000024 NCBI chr 2:178,354,830...178,366,843
Ensembl chr 2:178,354,890...178,366,685
JBrowse link
G Timp1 TIMP metallopeptidase inhibitor 1 ISO
ISS
(PMID:31380578)
GO_REF:0000024
RGD
UniProt
PMID:31380578 GO_REF:0000024 NCBI chr  X:1,364,771...1,369,451
Ensembl chr  X:1,364,786...1,369,384
JBrowse link
cellular response to UV-B term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn1a cyclin-dependent kinase inhibitor 1A ISO (MGI:MGI:5613877|PMID:25329316) RGD PMID:25329316 MGI:MGI:5613877 NCBI chr20:6,348,422...6,358,864
Ensembl chr20:6,351,458...6,358,864
JBrowse link
G Crip1 cysteine rich protein 1 ISO
ISS
(PMID:20415737) RGD PMID:20415737, PMID:20415737 RGD:8553326 NCBI chr 6:137,959,171...137,967,042
Ensembl chr 6:137,959,171...137,967,042
JBrowse link
G Hyal1 hyaluronidase 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:21699545)
Ensembl
UniProt
RGD
PMID:21699545 GO_REF:0000024, GO_REF:0000107 NCBI chr 8:116,332,834...116,337,522
Ensembl chr 8:116,332,796...116,335,435
JBrowse link
G Hyal2 hyaluronidase 2 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:21699545)
Ensembl
UniProt
RGD
PMID:21699545 GO_REF:0000024, GO_REF:0000107 NCBI chr 8:116,324,062...116,328,978
Ensembl chr 8:116,324,040...116,328,978
JBrowse link
G Hyal3 hyaluronidase 3 IEA
ISO
GO_REF:0000107
(PMID:21699545)
Ensembl
RGD
PMID:21699545 GO_REF:0000107 NCBI chr 8:116,336,512...116,342,147
Ensembl chr 8:116,336,512...116,342,146
JBrowse link
G Mfap4 microfibril associated protein 4 ISO (PMID:22355679) RGD PMID:22355679 NCBI chr10:47,765,463...47,768,484
Ensembl chr10:47,765,432...47,768,483
JBrowse link
G Mme membrane metallo-endopeptidase ISO
ISS
(PMID:20876573)
GO_REF:0000024
RGD
UniProt
PMID:20876573 GO_REF:0000024 NCBI chr 2:153,799,203...153,880,910
Ensembl chr 2:153,803,349...153,880,738
JBrowse link
G Rpl13a ribosomal protein L13A IEP RGD PMID:10483362 RGD:11036101 NCBI chr 1:101,120,325...101,123,401
Ensembl chr 1:101,120,325...101,123,402
JBrowse link
G Rpl35 ribosomal protein L35 IEP RGD PMID:10483362 RGD:11036101 NCBI chr 3:23,294,813...23,297,774
Ensembl chr 3:23,294,814...23,297,774
JBrowse link
G Stk11 serine/threonine kinase 11 IEA
ISO
GO_REF:0000107
(MGI:MGI:5613877|PMID:25329316)
(PMID:25329316)
Ensembl
RGD
PMID:25329316 GO_REF:0000107, MGI:MGI:5613877 NCBI chr 7:12,440,751...12,457,513
Ensembl chr 7:12,440,751...12,457,513
JBrowse link
cellular response to UV-C term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ei24 EI24, autophagy associated transmembrane protein ISO MGI:MGI:98834 (MGI:MGI:5543725|PMID:24014029) RGD PMID:24014029 MGI:MGI:5543725 NCBI chr 8:39,254,883...39,271,238
Ensembl chr 8:39,254,889...39,266,959
JBrowse link
G Impact impact RWD domain protein ISO
ISS
(MGI:MGI:5576818|PMID:24333428)
GO_REF:0000024
RGD
UniProt
PMID:24333428 GO_REF:0000024, MGI:MGI:5576818 NCBI chr18:4,325,872...4,346,734
Ensembl chr18:4,325,875...4,346,769
JBrowse link
G Mdm2 MDM2 proto-oncogene IEP RGD PMID:14558917 RGD:2317408 NCBI chr 7:60,719,060...60,743,618
Ensembl chr 7:60,719,066...60,743,328
JBrowse link
G Polh DNA polymerase eta ISO MGI:MGI:1347081|MGI:MGI:3614412 (MGI:MGI:3695544|PMID:17114294) RGD PMID:17114294 MGI:MGI:3695544 NCBI chr 9:17,163,354...17,198,006
Ensembl chr 9:17,163,354...17,197,132
JBrowse link
G Poli DNA polymerase iota ISO MGI:MGI:1891457|MGI:MGI:3055735 (MGI:MGI:3695544|PMID:17114294) RGD PMID:17114294 MGI:MGI:3695544 NCBI chr18:65,749,107...65,768,805
Ensembl chr18:65,748,908...65,768,781
JBrowse link
G RGD1306233 similar to hypothetical protein MGC29761 ISO (MGI:MGI:4868626|PMID:21159655) RGD PMID:21159655 MGI:MGI:4868626 NCBI chr 3:7,047,603...7,051,953
Ensembl chr 3:7,047,603...7,051,953
JBrowse link
G Tp53 tumor protein p53 ISO MGI:MGI:108090 (MGI:MGI:5543725|PMID:24014029) RGD PMID:24014029 MGI:MGI:5543725 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
cellular response to X-ray term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase ISO (PMID:26323318) RGD PMID:26323318 NCBI chr 8:58,015,938...58,119,973
Ensembl chr 8:58,015,940...58,120,045
JBrowse link
G Ccnd2 cyclin D2 ISO
IEA
MGI:MGI:2180642 (MGI:MGI:5500853|PMID:23714078)
GO_REF:0000107
RGD
Ensembl
PMID:23714078 GO_REF:0000107, MGI:MGI:5500853 NCBI chr 4:159,674,885...159,697,207
Ensembl chr 4:159,674,885...159,697,207
JBrowse link
G Dbn1 drebrin 1 IEP RGD PMID:23578130 RGD:10398817 NCBI chr17:9,679,511...9,693,878
Ensembl chr17:9,679,628...9,693,820
JBrowse link
G Dnm2 dynamin 2 IEP RGD PMID:15994918 RGD:9685147 NCBI chr 8:22,458,869...22,540,649
Ensembl chr 8:22,458,899...22,540,524
JBrowse link
G Hamp hepcidin antimicrobial peptide IEP RGD PMID:17090718 RGD:11041722 NCBI chr 1:89,368,021...89,369,960
Ensembl chr 1:89,368,021...89,369,960
JBrowse link
G Kat5 lysine acetyltransferase 5 IEP RGD PMID:15985650 RGD:2316135 NCBI chr 1:220,967,795...220,974,596
Ensembl chr 1:220,967,796...220,974,597
JBrowse link
G Nipbl NIPBL, cohesin loading factor ISO (PMID:17468178) RGD PMID:17468178 NCBI chr 2:57,508,830...57,676,197
Ensembl chr 2:57,509,428...57,600,820
JBrowse link
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 ISO (PMID:26323318) RGD PMID:26323318 NCBI chr13:48,679,726...48,709,663
Ensembl chr13:48,679,774...48,705,575
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 IEA
ISO
GO_REF:0000107
(MGI:MGI:4835111|PMID:19778523)
Ensembl
RGD
PMID:19778523 GO_REF:0000107, MGI:MGI:4835111 NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777
JBrowse link
G Sfrp2 secreted frizzled-related protein 2 ISO (MGI:MGI:4835111|PMID:19778523) RGD PMID:19778523 MGI:MGI:4835111 NCBI chr 2:182,723,732...182,731,277
Ensembl chr 2:182,723,854...182,731,764
JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 IEP RGD PMID:21915754 RGD:9586753 NCBI chr 3:113,160,030...113,259,701
Ensembl chr 3:113,160,000...113,231,790
JBrowse link
G Xrcc5 X-ray repair cross complementing 5 IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:11966321, PMID:21873635 RGD:727219, RGD:13792537 NCBI chr 9:79,659,275...79,748,050
Ensembl chr 9:79,659,251...79,748,078
JBrowse link
G Xrcc6 X-ray repair cross complementing 6 IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:11175667, PMID:21873635 RGD:2317102, RGD:13792537 NCBI chr 7:123,259,881...123,280,613
Ensembl chr 7:123,259,761...123,280,612
JBrowse link
dark adaptation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tent2 terminal nucleotidyltransferase 2 IEP RGD PMID:23700402 RGD:11041783 NCBI chr 2:22,746,290...22,798,252
Ensembl chr 2:22,747,547...22,798,214
JBrowse link
detection of light stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde6b phosphodiesterase 6B ISO MGI:MGI:1856373 (MGI:MGI:2155023|PMID:11747369) RGD PMID:11747369 MGI:MGI:2155023 NCBI chr14:2,328,690...2,371,913
Ensembl chr14:2,328,750...2,371,883
JBrowse link
G Rho rhodopsin ISO MGI:MGI:2181812 (MGI:MGI:2155023|PMID:11747369) RGD PMID:11747369 MGI:MGI:2155023 NCBI chr 4:147,832,136...147,837,298
Ensembl chr 4:147,832,136...147,837,298
JBrowse link
detection of light stimulus involved in visual perception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp8a2 ATPase phospholipid transporting 8A2 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr15:39,955,689...40,488,737
Ensembl chr15:40,000,322...40,428,800
JBrowse link
G Best1 bestrophin 1 ISO MGI:MGI:3795281 (MGI:MGI:3795256|PMID:16636205) RGD PMID:16636205 MGI:MGI:3795256 NCBI chr 1:226,033,146...226,049,893
Ensembl chr 1:226,030,875...226,049,929
JBrowse link
G Cacna1f calcium voltage-gated channel subunit alpha1 F ISO (PMID:7571473) RGD PMID:7571473 NCBI chr  X:15,712,709...15,741,135
Ensembl chr  X:15,712,713...15,741,103
JBrowse link
G Cacna2d4 calcium voltage-gated channel auxiliary subunit alpha2delta 4 ISO (PMID:17033974) RGD PMID:17033974 NCBI chr 4:151,298,548...151,409,263
Ensembl chr 4:151,298,548...151,409,263
JBrowse link
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 ISO MGI:MGI:1856936 (MGI:MGI:3795256|PMID:16636205) RGD PMID:16636205 MGI:MGI:3795256 NCBI chr 3:37,950,846...38,211,478
Ensembl chr 3:37,955,069...38,090,526
JBrowse link
G Ccdc66 coiled-coil domain containing 66 ISO (MGI:MGI:5141557|PMID:21680557) RGD PMID:21680557 MGI:MGI:5141557 NCBI chr16:3,107,119...3,139,188
Ensembl chr16:3,110,239...3,139,177
JBrowse link
G Cep250 centrosomal protein 250 ISO (MGI:MGI:6317055|PMID:30998843) RGD PMID:30998843 MGI:MGI:6317055 NCBI chr 3:151,508,366...151,544,631
Ensembl chr 3:151,508,361...151,544,674
JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 ISO (PMID:15557452) RGD PMID:15557452 NCBI chr19:10,142,440...10,206,618
Ensembl chr19:10,142,496...10,206,681
JBrowse link
G Crb1 crumbs cell polarity complex component 1 ISO (MGI:MGI:5315300|PMID:22447858) RGD PMID:22447858 MGI:MGI:5315300 NCBI chr13:56,270,519...56,462,893
Ensembl chr13:56,270,781...56,462,834
JBrowse link
G Gja10 gap junction protein, alpha 10 ISO MGI:MGI:3043946 (MGI:MGI:3654563|PMID:16820008) RGD PMID:16820008 MGI:MGI:3654563 NCBI chr 5:47,819,484...47,841,138
Ensembl chr 5:47,835,066...47,836,586
JBrowse link
G Gnat1 G protein subunit alpha transducin 1 ISO MGI:MGI:2152779 (MGI:MGI:3772743|PMID:18171936)
(PMID:17584859)
RGD PMID:17584859, PMID:18171936 MGI:MGI:3772743 NCBI chr 8:116,433,302...116,438,038
Ensembl chr 8:116,433,302...116,438,038
JBrowse link
G Gnat2 G protein subunit alpha transducin 2 ISO MGI:MGI:3588845 (MGI:MGI:3714271|PMID:17065522)
(PMID:12077706)
RGD PMID:12077706, PMID:17065522 MGI:MGI:3714271 NCBI chr 2:210,880,754...210,890,765
Ensembl chr 2:210,880,777...210,889,881
JBrowse link
G Grm6 glutamate metabotropic receptor 6 ISO
ISS
(PMID:17405131)
GO_REF:0000024
RGD
UniProt
PMID:17405131 GO_REF:0000024 NCBI chr10:36,345,503...36,363,416
Ensembl chr10:36,345,939...36,360,665
JBrowse link
G Gucy2f guanylate cyclase 2F ISO (MGI:MGI:3708225|PMID:17255100) RGD PMID:17255100 MGI:MGI:3708225 NCBI chr  X:113,372,240...113,474,210
Ensembl chr  X:113,372,240...113,474,164
JBrowse link
G Prph2 peripherin 2 ISO MGI:MGI:1856523|MGI:MGI:6367783|MGI:MGI:6367794|MGI:MGI:97998 (MGI:MGI:5905515|PMID:28053051), (MGI:MGI:6305433|PMID:26420485) RGD PMID:26420485, PMID:28053051 MGI:MGI:5905515, MGI:MGI:6305433 NCBI chr 9:16,085,933...16,386,176 JBrowse link
G Rbp4 retinol binding protein 4 ISO MGI:MGI:2445721 (MGI:MGI:3687059|PMID:12484775) RGD PMID:12484775 MGI:MGI:3687059 NCBI chr 1:256,806,476...256,813,678
Ensembl chr 1:256,806,472...256,813,711
JBrowse link
G Reep6 receptor accessory protein 6 ISO
ISS
(PMID:27889058)
GO_REF:0000024
RGD
UniProt
PMID:27889058 GO_REF:0000024 NCBI chr 7:12,240,059...12,246,814
Ensembl chr 7:12,240,060...12,246,729
JBrowse link
G Rgs9bp regulator of G protein signaling 9 binding protein ISO MGI:MGI:3028628 (MGI:MGI:3027216|PMID:14625292) RGD PMID:14625292 MGI:MGI:3027216 NCBI chr 1:91,855,270...91,855,983
Ensembl chr 1:91,855,270...91,855,983
JBrowse link
G Rom1 retinal outer segment membrane protein 1 ISO MGI:MGI:102791 (MGI:MGI:5905515|PMID:28053051) RGD PMID:28053051 MGI:MGI:5905515 NCBI chr 1:225,126,732...225,128,740
Ensembl chr 1:225,126,734...225,128,740
JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 ISO (PMID:15557452) RGD PMID:15557452 NCBI chr 2:266,141,581...266,169,197
Ensembl chr 2:266,141,581...266,169,197
JBrowse link
G Rpgrip1 RPGR interacting protein 1 ISO (PMID:21521437) RGD PMID:21521437 NCBI chr15:28,521,287...28,575,046
Ensembl chr15:28,522,737...28,574,737
JBrowse link
G Sema5a semaphorin 5A ISO MGI:MGI:107555 (MGI:MGI:5140622|PMID:21835343) RGD PMID:21835343 MGI:MGI:5140622 NCBI chr 2:85,377,318...85,808,970
Ensembl chr 2:85,377,318...85,808,970
JBrowse link
G Sema5b semaphorin 5B ISO MGI:MGI:107556 (MGI:MGI:5140622|PMID:21835343) RGD PMID:21835343 MGI:MGI:5140622 NCBI chr11:68,304,844...68,435,109
Ensembl chr11:68,306,659...68,349,238
JBrowse link
G Tulp1 TUB like protein 1 ISO (PMID:15557452) RGD PMID:15557452 NCBI chr20:7,931,673...7,943,601
Ensembl chr20:7,931,674...7,943,575
JBrowse link
detection of UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fech ferrochelatase ISO MGI:MGI:2384729 (MGI:MGI:2384247|PMID:12149233) RGD PMID:12149233 MGI:MGI:2384247 NCBI chr18:59,941,992...59,975,192
Ensembl chr18:59,941,992...59,975,192
JBrowse link
detection of visible light term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpr88 G-protein coupled receptor 88 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:219,258,346...219,263,819
Ensembl chr 2:219,258,347...219,262,901
JBrowse link
G Irx6 iroquois homeobox 6 ISO MGI:MGI:5448232 (MGI:MGI:5447580|PMID:23172916) RGD PMID:23172916 MGI:MGI:5447580 NCBI chr19:15,726,633...15,733,442
Ensembl chr19:15,727,514...15,733,412
JBrowse link
G Opn1mw opsin 1, medium wave sensitive IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:156,569,683...156,589,907
Ensembl chr  X:156,569,683...156,589,907
JBrowse link
G Opn1sw opsin 1, short wave sensitive IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:56,653,840...56,656,980
Ensembl chr 4:56,653,844...56,656,980
JBrowse link
G Opn3 opsin 3 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:93,716,481...93,746,994
Ensembl chr13:93,716,481...93,746,994
JBrowse link
G Opn5 opsin 5 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:21,045,457...21,092,517
Ensembl chr 9:21,045,457...21,093,172
JBrowse link
G Rgr retinal G protein coupled receptor IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr16:14,286,323...14,300,972
Ensembl chr16:14,286,323...14,300,951
JBrowse link
G Rrh retinal pigment epithelium derived rhodopsin homolog IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:235,237,422...235,250,474
Ensembl chr 2:235,237,414...235,249,575
JBrowse link
DNA synthesis involved in UV-damage excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pola1 DNA polymerase alpha 1, catalytic subunit NOT ISS
ISO
GO_REF:0000024
(PMID:1730053)
UniProt
RGD
PMID:1730053 GO_REF:0000024 NCBI chr  X:62,382,604...62,698,830
Ensembl chr  X:62,382,608...62,698,830
JBrowse link
G Pold3 DNA polymerase delta 3, accessory subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:165,085,142...165,122,385
Ensembl chr 1:165,083,622...165,123,455
JBrowse link
G Trex1 three prime repair exonuclease 1 ISO MGI:MGI:3052754 (MGI:MGI:5562498|PMID:23993650) RGD PMID:23993650 MGI:MGI:5562498 NCBI chr 8:117,796,127...117,797,427
Ensembl chr 8:117,796,128...117,797,427
JBrowse link
entrainment of circadian clock by photoperiod term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aanat aralkylamine N-acetyltransferase TAS RGD PMID:8770929 RGD:1298540 NCBI chr10:105,568,091...105,572,407
Ensembl chr10:105,568,091...105,572,403
JBrowse link
G Atoh7 atonal bHLH transcription factor 7 ISO (MGI:MGI:5699646|PMID:26392540) RGD PMID:26392540 MGI:MGI:5699646 NCBI chr20:27,082,961...27,083,410
Ensembl chr20:27,082,961...27,083,410
JBrowse link
G Bhlhe40 basic helix-loop-helix family, member e40 ISO
IEA
(MGI:MGI:3798698|PMID:18411297)
GO_REF:0000107
RGD
Ensembl
PMID:18411297 GO_REF:0000107, MGI:MGI:3798698 NCBI chr 4:140,703,619...140,709,319
Ensembl chr 4:140,703,619...140,709,319
JBrowse link
G Crtc1 CREB regulated transcription coactivator 1 ISO
ISS
(MGI:MGI:5532783|PMID:23993098)
GO_REF:0000024
RGD
UniProt
PMID:23993098 GO_REF:0000024, MGI:MGI:5532783 NCBI chr16:20,740,746...20,798,145
Ensembl chr16:20,740,826...20,794,039
JBrowse link
G Cry1 cryptochrome circadian regulator 1 ISO
IBA
ISS
(MGI:MGI:5490394|PMID:23616524)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:23616524, PMID:21873635 GO_REF:0000024, MGI:MGI:5490394, RGD:13792537 NCBI chr 7:24,534,593...24,634,098
Ensembl chr 7:24,534,615...24,634,097
JBrowse link
G Cry2 cryptochrome circadian regulator 2 IEA
IBA
ISS
ISO
GO_REF:0000107
PMID:21873635
GO_REF:0000024
(MGI:MGI:5490394|PMID:23616524)
Ensembl
UniProt
RGD
PMID:23616524, PMID:21873635 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5490394, RGD:13792537 NCBI chr 3:81,314,151...81,344,143
Ensembl chr 3:81,314,149...81,344,110
JBrowse link
G Fbxl12 F-box and leucine-rich repeat protein 12 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:21,656,636...21,662,755
Ensembl chr 8:21,656,639...21,661,259
JBrowse link
G Fbxl21 F-box and leucine-rich repeat protein 21 ISO
IBA
(MGI:MGI:5470183|PMID:23452855), (MGI:MGI:5487698|PMID:23452856)
PMID:21873635
RGD PMID:23452855, PMID:23452856, PMID:21873635 MGI:MGI:5470183, MGI:MGI:5487698, RGD:13792537 NCBI chr17:8,505,771...8,520,208
Ensembl chr17:8,505,996...8,520,147
JBrowse link
G Fbxl22 F-box and leucine-rich repeat protein 22 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:72,198,043...72,204,730
Ensembl chr 8:72,198,043...72,204,730
JBrowse link
G Fbxl3 F-box and leucine-rich repeat protein 3 ISO
IBA
(MGI:MGI:5470183|PMID:23452855), (MGI:MGI:5487698|PMID:23452856), (MGI:MGI:5490394|PMID:23616524)
PMID:21873635
RGD PMID:23452855, PMID:23452856, PMID:23616524, PMID:21873635 MGI:MGI:5470183, MGI:MGI:5487698, MGI:MGI:5490394, RGD:13792537 NCBI chr15:93,647,307...93,667,395
Ensembl chr15:93,647,310...93,667,395
JBrowse link
G Fbxl6 F-box and leucine-rich repeat protein 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:117,602,056...117,604,954
Ensembl chr 7:117,602,041...117,605,141
JBrowse link
G Fbxl8 F-box and leucine-rich repeat protein 8 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:37,216,696...37,225,701
Ensembl chr19:37,221,132...37,226,065
JBrowse link
G Id2 inhibitor of DNA binding 2 ISO
ISS
(MGI:MGI:3838062|PMID:19217292)
GO_REF:0000024
RGD
UniProt
PMID:19217292 GO_REF:0000024, MGI:MGI:3838062 NCBI chr 6:44,360,077...44,361,908
Ensembl chr 6:44,348,501...44,363,915
JBrowse link
G Mta1 metastasis associated 1 ISO
ISS
(MGI:MGI:5582861|PMID:24089055)
GO_REF:0000024
RGD
UniProt
PMID:24089055 GO_REF:0000024, MGI:MGI:5582861 NCBI chr 6:137,911,302...137,950,066
Ensembl chr 6:137,924,293...137,950,075
JBrowse link
G Nr2f6 nuclear receptor subfamily 2, group F, member 6 ISO
IEA
MGI:MGI:3574037 (MGI:MGI:3530176|PMID:15741322)
GO_REF:0000107
RGD
Ensembl
PMID:15741322 GO_REF:0000107, MGI:MGI:3530176 NCBI chr16:19,769,968...19,777,414
Ensembl chr16:19,769,968...19,777,414
JBrowse link
G Opn4 opsin 4 ISO (MGI:MGI:5925970|PMID:26320947) RGD PMID:26320947 MGI:MGI:5925970 NCBI chr16:10,943,353...10,966,602
Ensembl chr16:10,943,341...10,952,549
JBrowse link
G Opn5 opsin 5 ISO (MGI:MGI:5699646|PMID:26392540), (MGI:MGI:6376341|PMID:31607531), (MGI:MGI:6378274|PMID:30240620) RGD PMID:26392540, PMID:30240620, PMID:31607531 MGI:MGI:5699646, MGI:MGI:6376341, MGI:MGI:6378274 NCBI chr 9:21,045,457...21,092,517
Ensembl chr 9:21,045,457...21,093,172
JBrowse link
G Pde6b phosphodiesterase 6B ISO (MGI:MGI:6378274|PMID:30240620) RGD PMID:30240620 MGI:MGI:6378274 NCBI chr14:2,328,690...2,371,913
Ensembl chr14:2,328,750...2,371,883
JBrowse link
G Per1 period circadian regulator 1 IEA
IBA
ISS
ISO
GO_REF:0000107
PMID:21873635
GO_REF:0000024
(MGI:MGI:3578039|PMID:15888647)
Ensembl
UniProt
RGD
PMID:15888647, PMID:21873635 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3578039, RGD:13792537 NCBI chr10:55,681,761...55,696,557
Ensembl chr10:55,687,050...55,695,994
JBrowse link
G Per2 period circadian regulator 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:98,555,154...98,597,362
Ensembl chr 9:98,555,169...98,597,359
JBrowse link
G Per3 period circadian regulator 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:168,088,126...168,123,482
Ensembl chr 5:168,086,998...168,123,395
JBrowse link
G Pml PML nuclear body scaffold ISO (MGI:MGI:5314433|PMID:22274616) RGD PMID:22274616 MGI:MGI:5314433 NCBI chr 8:63,002,515...63,034,310
Ensembl chr 8:63,004,870...63,034,226
JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha ISO
ISS
(MGI:MGI:5086036|PMID:21712997)
GO_REF:0000024
RGD
UniProt
PMID:21712997 GO_REF:0000024, MGI:MGI:5086036 NCBI chr 1:219,439,953...219,443,570
Ensembl chr 1:219,439,953...219,443,570
JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta ISO
ISS
(MGI:MGI:5086036|PMID:21712997)
GO_REF:0000024
RGD
UniProt
PMID:21712997 GO_REF:0000024, MGI:MGI:5086036 NCBI chr 6:23,548,507...23,581,136
Ensembl chr 6:23,549,317...23,581,052
JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma ISS
ISO
GO_REF:0000024
(MGI:MGI:5086036|PMID:21712997)
UniProt
RGD
PMID:21712997 GO_REF:0000024, MGI:MGI:5086036 NCBI chr12:39,864,302...39,882,030
Ensembl chr12:39,864,295...39,882,030
JBrowse link
G Rbm4 RNA binding motif protein 4 ISO (MGI:MGI:3703208|PMID:17264215) RGD PMID:17264215 MGI:MGI:3703208 NCBI chr 1:220,038,403...220,049,756
Ensembl chr 1:220,039,734...220,048,966
JBrowse link
G Rbm4b RNA binding motif protein 4B ISO
ISS
(MGI:MGI:3703208|PMID:17264215)
GO_REF:0000024
RGD
UniProt
PMID:17264215 GO_REF:0000024, MGI:MGI:3703208 NCBI chr 1:220,009,397...220,019,488
Ensembl chr 1:220,009,397...220,019,486
JBrowse link
G Sik1 salt-inducible kinase 1 ISO
ISS
(MGI:MGI:5532783|PMID:23993098)
GO_REF:0000024
RGD
UniProt
PMID:23993098 GO_REF:0000024, MGI:MGI:5532783 NCBI chr20:10,670,747...10,680,279
Ensembl chr20:10,668,411...10,680,283
JBrowse link
G Tp53 tumor protein p53 ISO
ISS
(MGI:MGI:5613453|PMID:24051492)
GO_REF:0000024
RGD
UniProt
PMID:24051492 GO_REF:0000024, MGI:MGI:5613453 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
G Usp2 ubiquitin specific peptidase 2 ISO
ISS
(MGI:MGI:5607210|PMID:23213472)
GO_REF:0000024
RGD
UniProt
PMID:23213472 GO_REF:0000024, MGI:MGI:5607210 NCBI chr 8:48,403,985...48,432,525
Ensembl chr 8:48,406,260...48,430,885
JBrowse link
long-day photoperiodism term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agrp agouti related neuropeptide IEP RGD PMID:19490367 RGD:6480663 NCBI chr19:37,525,941...37,584,875
Ensembl chr19:37,526,419...37,528,011
JBrowse link
negative regulation of response to gamma radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkdc protein kinase, DNA-activated, catalytic subunit IMP RGD PMID:22981234 RGD:8696027 NCBI chr11:89,293,547...89,510,948
Ensembl chr11:89,293,696...89,510,871
JBrowse link
negative regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nedd4 NEDD4 E3 ubiquitin protein ligase ISO (PMID:17996703) RGD PMID:17996703 NCBI chr 8:79,323,408...79,408,842
Ensembl chr 8:79,323,408...79,408,833
JBrowse link
optokinetic behavior term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa1 homeobox A1 ISO (PMID:16155570) RGD PMID:16155570 NCBI chr 4:82,124,358...82,127,182
Ensembl chr 4:82,125,406...82,127,066
JBrowse link
G Opn4 opsin 4 ISS
ISO
GO_REF:0000024
(MGI:MGI:5699646|PMID:26392540)
UniProt
RGD
PMID:26392540 GO_REF:0000024, MGI:MGI:5699646 NCBI chr16:10,943,353...10,966,602
Ensembl chr16:10,943,341...10,952,549
JBrowse link
photoperiodism term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aanat aralkylamine N-acetyltransferase IDA RGD PMID:12358739 RGD:628397 NCBI chr10:105,568,091...105,572,407
Ensembl chr10:105,568,091...105,572,403
JBrowse link
G Drd4 dopamine receptor D4 IEP RGD PMID:18321474 RGD:2301031 NCBI chr 1:214,278,296...214,282,818
Ensembl chr 1:214,278,296...214,281,483
JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit IEP RGD PMID:16962714 RGD:2293767 NCBI chr 6:25,598,936...25,616,995
Ensembl chr 6:25,598,936...25,616,995
JBrowse link
G Nmu neuromedin U IEP RGD PMID:17726140 RGD:1642120 NCBI chr14:34,353,683...34,381,968
Ensembl chr14:34,354,503...34,381,828
JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 IEP RGD PMID:21076970 RGD:10448986 NCBI chr10:86,683,875...86,690,815
Ensembl chr10:86,683,875...86,690,815
JBrowse link
phototransduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arrb1 arrestin, beta 1 ISO MGI:MGI:2388373 (MGI:MGI:3772638|PMID:11853756) RGD PMID:11853756 MGI:MGI:3772638 NCBI chr 1:164,502,099...164,573,947
Ensembl chr 1:164,502,389...164,593,139
JBrowse link
G Asic2 acid sensing ion channel subunit 2 ISO
IEA
MGI:MGI:3043849 (MGI:MGI:3042539|PMID:14762118)
GO_REF:0000107
RGD
Ensembl
PMID:14762118 GO_REF:0000107, MGI:MGI:3042539 NCBI chr10:68,247,800...69,347,223
Ensembl chr10:68,248,655...68,517,564
JBrowse link
G Cabp4 calcium binding protein 4 ISO MGI:MGI:3056615 (MGI:MGI:3609280|PMID:16249514) RGD PMID:16249514 MGI:MGI:3609280 NCBI chr 1:219,383,452...219,388,009
Ensembl chr 1:219,383,452...219,388,009
JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 ISO MGI:MGI:3527896 (MGI:MGI:3527312|PMID:15634774) RGD PMID:15634774 MGI:MGI:3527312 NCBI chr19:10,142,440...10,206,618
Ensembl chr19:10,142,496...10,206,681
JBrowse link
G Gnat1 G protein subunit alpha transducin 1 ISO MGI:MGI:2152779 (MGI:MGI:1928441|PMID:11095744), (MGI:MGI:3609280|PMID:16249514), (MGI:MGI:3615719|PMID:15073279), (MGI:MGI:3757777|PMID:17881533), (MGI:MGI:3772638|PMID:11853756), (MGI:MGI:3778702|PMID:18367617) RGD PMID:11095744, PMID:11853756, PMID:15073279, PMID:16249514, PMID:17881533, PMID:18367617 MGI:MGI:1928441, MGI:MGI:3609280, MGI:MGI:3615719, MGI:MGI:3757777, MGI:MGI:3772638, MGI:MGI:3778702 NCBI chr 8:116,433,302...116,438,038
Ensembl chr 8:116,433,302...116,438,038
JBrowse link
G Gnat2 G protein subunit alpha transducin 2 ISO MGI:MGI:3588845 (MGI:MGI:3761397|PMID:17408617), (MGI:MGI:3772743|PMID:18171936) RGD PMID:17408617, PMID:18171936 MGI:MGI:3761397, MGI:MGI:3772743 NCBI chr 2:210,880,754...210,890,765
Ensembl chr 2:210,880,777...210,889,881
JBrowse link
G Gngt1 G protein subunit gamma transducin 1 ISO MGI:MGI:3783323 (MGI:MGI:3778702|PMID:18367617) RGD PMID:18367617 MGI:MGI:3778702 NCBI chr 4:28,972,339...28,975,419
Ensembl chr 4:28,972,434...28,975,419
JBrowse link
G Gpr88 G-protein coupled receptor 88 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:219,258,346...219,263,819
Ensembl chr 2:219,258,347...219,262,901
JBrowse link
G Guca1a guanylate cyclase activator 1A ISO MGI:MGI:2664159 (MGI:MGI:2664110|PMID:11493703), (MGI:MGI:3584028|PMID:15173221) RGD PMID:11493703, PMID:15173221 MGI:MGI:2664110, MGI:MGI:3584028 NCBI chr 9:15,609,804...15,620,030
Ensembl chr 9:15,609,804...15,620,029
JBrowse link
G Guca1b guanylate cyclase activator 1B ISO MGI:MGI:2664160 (MGI:MGI:2664110|PMID:11493703), (MGI:MGI:3584028|PMID:15173221) RGD PMID:11493703, PMID:15173221 MGI:MGI:2664110, MGI:MGI:3584028 NCBI chr 9:15,621,083...15,629,017
Ensembl chr 9:15,621,083...15,629,017
JBrowse link
G Opn1mw opsin 1, medium wave sensitive IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:156,569,683...156,589,907
Ensembl chr  X:156,569,683...156,589,907
JBrowse link
G Opn1sw opsin 1, short wave sensitive IEA
IBA
GO_REF:0000043
PMID:21873635
UniProt PMID:21873635 GO_REF:0000043, RGD:13792537 NCBI chr 4:56,653,840...56,656,980
Ensembl chr 4:56,653,844...56,656,980
JBrowse link
G Opn3 opsin 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:93,716,481...93,746,994
Ensembl chr13:93,716,481...93,746,994
JBrowse link
G Opn4 opsin 4 IDA
IBA
ISO
PMID:21873635
(MGI:MGI:2667269|PMID:12808468)
(PMID:15674244)
RGD PMID:12808468, PMID:15674244, PMID:11834834, PMID:21873635 MGI:MGI:2667269, RGD:633348, RGD:13792537 NCBI chr16:10,943,353...10,966,602
Ensembl chr16:10,943,341...10,952,549
JBrowse link
G Opn5 opsin 5 ISO
IBA
(MGI:MGI:6359287|PMID:30936473)
PMID:21873635
RGD PMID:30936473, PMID:21873635 MGI:MGI:6359287, RGD:13792537 NCBI chr 9:21,045,457...21,092,517
Ensembl chr 9:21,045,457...21,093,172
JBrowse link
G Plcb4 phospholipase C, beta 4 NAS RGD PMID:7688223 RGD:633574 NCBI chr 3:128,601,163...128,971,720
Ensembl chr 3:128,756,799...128,971,746
JBrowse link
G Rcvrn recoverin ISO MGI:MGI:3584102 (MGI:MGI:3584028|PMID:15173221) RGD PMID:15173221 MGI:MGI:3584028 NCBI chr10:54,246,250...54,253,996
Ensembl chr10:54,246,250...54,253,996
JBrowse link
G Rgr retinal G protein coupled receptor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:14,286,323...14,300,972
Ensembl chr16:14,286,323...14,300,951
JBrowse link
G Rho rhodopsin ISO
IBA
IEA
MGI:MGI:2181812 (MGI:MGI:3655007|PMID:16723493)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:16723493, PMID:21873635 GO_REF:0000107, MGI:MGI:3655007, RGD:13792537 NCBI chr 4:147,832,136...147,837,298
Ensembl chr 4:147,832,136...147,837,298
JBrowse link
G Rrh retinal pigment epithelium derived rhodopsin homolog IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:235,237,422...235,250,474
Ensembl chr 2:235,237,414...235,249,575
JBrowse link
phototransduction, UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Opn5 opsin 5 ISO (PMID:22043319)
(MGI:MGI:6230806|PMID:22043319)
RGD PMID:22043319 MGI:MGI:6230806 NCBI chr 9:21,045,457...21,092,517
Ensembl chr 9:21,045,457...21,093,172
JBrowse link
phototransduction, visible light term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aipl1 aryl hydrocarbon receptor-interacting protein-like 1 ISO MGI:MGI:3054784 (MGI:MGI:3054118|PMID:15365173) RGD PMID:15365173 MGI:MGI:3054118 NCBI chr10:58,599,690...58,631,194
Ensembl chr10:58,599,856...58,608,907
JBrowse link
G Chrm1 cholinergic receptor, muscarinic 1 ISO (PMID:12196552) RGD PMID:12196552 NCBI chr 1:224,869,087...224,885,101
Ensembl chr 1:224,882,439...224,884,205
JBrowse link
G Gnat1 G protein subunit alpha transducin 1 ISO (PMID:17584859) RGD PMID:17584859 NCBI chr 8:116,433,302...116,438,038
Ensembl chr 8:116,433,302...116,438,038
JBrowse link
G Pde6c phosphodiesterase 6C ISO MGI:MGI:2657247 (MGI:MGI:3655007|PMID:16723493) RGD PMID:16723493 MGI:MGI:3655007 NCBI chr 1:256,822,099...256,885,879
Ensembl chr 1:256,822,334...256,877,810
JBrowse link
positive regulation of cellular response to X-ray term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmga2 high mobility group AT-hook 2 ISO
ISS
(PMID:16061642)
GO_REF:0000024
RGD
UniProt
PMID:16061642 GO_REF:0000024 NCBI chr 7:65,159,944...65,275,408
Ensembl chr 7:65,159,944...65,275,408
JBrowse link
red, far-red light phototransduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rho rhodopsin IDA RGD PMID:2525480 RGD:6893558 NCBI chr 4:147,832,136...147,837,298
Ensembl chr 4:147,832,136...147,837,298
JBrowse link
regulation of cellular response to gamma radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase IMP RGD PMID:28007901 RGD:12879399 NCBI chr 8:58,015,938...58,119,973
Ensembl chr 8:58,015,940...58,120,045
JBrowse link
regulation of cellular response to X-ray term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 ISO
ISS
(PMID:19735555)
GO_REF:0000024
RGD
UniProt
PMID:19735555 GO_REF:0000024 NCBI chr17:72,419,752...72,452,043
Ensembl chr17:72,429,618...72,450,681
JBrowse link
regulation of mRNA stability involved in cellular response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Npm1 nucleophosmin 1 ISO (PMID:12080348) RGD PMID:12080348 NCBI chr10:18,080,949...18,091,062
Ensembl chr10:18,080,950...18,090,950
JBrowse link
regulation of rhodopsin mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aipl1 aryl hydrocarbon receptor-interacting protein-like 1 ISO MGI:MGI:3054784|MGI:MGI:3054793 (MGI:MGI:3054118|PMID:15365173), (MGI:MGI:3054134|PMID:15365178) RGD PMID:15365173, PMID:15365178 MGI:MGI:3054118, MGI:MGI:3054134 NCBI chr10:58,599,690...58,631,194
Ensembl chr10:58,599,856...58,608,907
JBrowse link
G Grk1 G protein-coupled receptor kinase 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:15946941)
Ensembl
UniProt
RGD
PMID:15946941 GO_REF:0000024, GO_REF:0000107 NCBI chr16:81,153,489...81,165,442
Ensembl chr16:81,153,489...81,165,442
JBrowse link
regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chek1 checkpoint kinase 1 ISO
ISS
(MGI:MGI:5294291|PMID:18243098)
GO_REF:0000024
RGD
UniProt
PMID:18243098 GO_REF:0000024, MGI:MGI:5294291 NCBI chr 8:39,181,162...39,201,588
Ensembl chr 8:39,181,163...39,243,882
JBrowse link
regulation of translation involved in cellular response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rpl26 ribosomal protein L26 ISO (PMID:16213212) RGD PMID:16213212 NCBI chr10:55,492,417...55,495,547
Ensembl chr10:55,492,404...55,496,012
JBrowse link
response to blue light term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpt1b carnitine palmitoyltransferase 1B ISO
ISS
(MGI:MGI:6392469|PMID:32040503)
GO_REF:0000024
RGD
UniProt
PMID:32040503 GO_REF:0000024, MGI:MGI:6392469 NCBI chr 7:130,395,211...130,404,731
Ensembl chr 7:130,395,194...130,405,347
JBrowse link
G Dct dopachrome tautomerase ISO (PMID:28842328) RGD PMID:28842328 NCBI chr15:103,208,174...103,245,033
Ensembl chr15:103,208,258...103,244,494
JBrowse link
G Kcnj10 potassium inwardly-rectifying channel, subfamily J, member 10 IEP RGD PMID:18450590 RGD:2326038 NCBI chr13:90,722,945...90,753,338
Ensembl chr13:90,723,092...90,752,581
JBrowse link
G Opn3 opsin 3 ISO
IEA
(PMID:28842328), (PMID:30168605)
(MGI:MGI:6392469|PMID:32040503)
GO_REF:0000107
RGD
Ensembl
PMID:28842328, PMID:30168605, PMID:32040503 GO_REF:0000107, MGI:MGI:6392469 NCBI chr13:93,716,481...93,746,994
Ensembl chr13:93,716,481...93,746,994
JBrowse link
G Tyr tyrosinase ISO
IEA
(PMID:28842328)
GO_REF:0000107
RGD
Ensembl
PMID:28842328 GO_REF:0000107 NCBI chr 1:151,012,598...151,106,802
Ensembl chr 1:151,012,598...151,106,802
JBrowse link
response to gamma radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 ISO MGI:MGI:2157186 (MGI:MGI:3057047|PMID:15480992) RGD PMID:15480992 MGI:MGI:3057047 NCBI chr 4:155,386,367...155,414,034
Ensembl chr 4:155,386,711...155,401,480
JBrowse link
G Bak1 BCL2-antagonist/killer 1 ISO MGI:MGI:2159364 (MGI:MGI:3722566|PMID:17068116) RGD PMID:17068116 MGI:MGI:3722566 NCBI chr20:5,609,620...5,618,899
Ensembl chr20:5,609,625...5,618,260
JBrowse link
G Bax BCL2 associated X, apoptosis regulator ISO
IEA
MGI:MGI:1857429 (MGI:MGI:3722566|PMID:17068116)
GO_REF:0000107
RGD
Ensembl
PMID:17068116 GO_REF:0000107, MGI:MGI:3722566 NCBI chr 1:101,451,801...101,457,207
Ensembl chr 1:101,451,802...101,457,207
JBrowse link
G Bcl2 BCL2, apoptosis regulator IEA
ISO
GO_REF:0000107
MGI:MGI:2156165 (MGI:MGI:1858868|PMID:10815637), (MGI:MGI:2156164|PMID:8170972), (MGI:MGI:3722566|PMID:17068116), (MGI:MGI:62849|PMID:8372353)
Ensembl
RGD
PMID:8170972, PMID:8372353, PMID:10815637, PMID:17068116 GO_REF:0000107, MGI:MGI:1858868, MGI:MGI:2156164, MGI:MGI:3722566, MGI:MGI:62849 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Brca2 BRCA2, DNA repair associated IEA
ISO
GO_REF:0000107
MGI:MGI:2177233|MGI:MGI:2653913|MGI:MGI:2653914 (MGI:MGI:1277623|PMID:9699678), (MGI:MGI:87113|PMID:9126738)
Ensembl
RGD
PMID:9126738, PMID:9699678 GO_REF:0000107, MGI:MGI:1277623, MGI:MGI:87113 NCBI chr12:503,660...544,754
Ensembl chr12:504,007...544,748
JBrowse link
G Casp6 caspase 6 IEP RGD PMID:10590178 RGD:2301333 NCBI chr 2:235,341,326...235,353,715
Ensembl chr 2:235,341,365...235,353,967
Ensembl chr 2:235,341,365...235,353,967
JBrowse link
G Cav1 caveolin 1 IEP RGD PMID:17993744 RGD:2289115 NCBI chr 4:44,597,123...44,630,206
Ensembl chr 4:44,597,123...44,630,200
JBrowse link
G Cbl Cbl proto-oncogene IEP RGD PMID:16301331 RGD:1579837 NCBI chr 8:48,481,256...48,564,775
Ensembl chr 8:48,489,036...48,564,722
JBrowse link
G Ccl2 C-C motif chemokine ligand 2 IEP RGD PMID:19084914 RGD:2306303 NCBI chr10:69,412,065...69,413,863
Ensembl chr10:69,412,017...69,413,870
JBrowse link
G Ccl7 C-C motif chemokine ligand 7 IEP RGD PMID:20185578 RGD:5134998 NCBI chr10:69,423,083...69,424,933
Ensembl chr10:69,423,086...69,424,979
JBrowse link
G Chek2 checkpoint kinase 2 ISO (MGI:MGI:3032464|PMID:14744935) RGD PMID:14744935 MGI:MGI:3032464 NCBI chr12:51,845,574...51,878,098
Ensembl chr12:51,845,796...51,877,624
JBrowse link
G Cxcl1 C-X-C motif chemokine ligand 1 IEP RGD PMID:20185578 RGD:5134998 NCBI chr14:18,743,678...18,745,457
Ensembl chr14:18,743,685...18,745,457
JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 IEP RGD PMID:19084914 RGD:2306303 NCBI chr14:17,210,733...17,212,930
Ensembl chr14:17,210,733...17,212,930
JBrowse link
G Cxcl2 C-X-C motif chemokine ligand 2 IEP RGD PMID:20185578 RGD:5134998 NCBI chr14:18,731,346...18,733,391
Ensembl chr14:18,731,378...18,733,391
JBrowse link
G Cxcl6 C-X-C motif chemokine ligand 6 IEP RGD PMID:20185578 RGD:5134998 NCBI chr14:18,860,201...18,920,839
Ensembl chr14:18,860,264...18,862,407
JBrowse link
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 IEP 137 cesium RGD PMID:18046538 RGD:4831839 NCBI chr 8:62,798,317...62,809,848
Ensembl chr 8:62,779,875...62,809,893
JBrowse link
G Dcun1d3 defective in cullin neddylation 1 domain containing 3 ISO
ISS
(PMID:18823379)
GO_REF:0000024
RGD
UniProt
PMID:18823379 GO_REF:0000024 NCBI chr 1:189,626,442...189,666,440
Ensembl chr 1:189,627,972...189,666,440
JBrowse link
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 IEP RGD PMID:19169047 RGD:9685443 NCBI chr 1:259,692,020...259,818,922
Ensembl chr 1:259,739,955...259,819,494
JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor ISO MGI:MGI:1932102 (MGI:MGI:3054497|PMID:15340056) RGD PMID:15340056 MGI:MGI:3054497 NCBI chr16:8,734,028...8,804,610
Ensembl chr16:8,734,035...8,804,610
JBrowse link
G Fancd2 FA complementation group D2 IEA
ISO
GO_REF:0000107
(PMID:12874027)
Ensembl
RGD
PMID:12874027 GO_REF:0000107 NCBI chr 4:145,489,869...145,551,479
Ensembl chr 4:145,489,869...145,551,479
JBrowse link
G Gata3 GATA binding protein 3 IEP RGD PMID:19084914 RGD:2306303 NCBI chr17:72,419,752...72,452,043
Ensembl chr17:72,429,618...72,450,681
JBrowse link
G Gpx1 glutathione peroxidase 1 ISO
IEA
MGI:MGI:104887|MGI:MGI:98352 (MGI:MGI:3044494|PMID:15182862)
GO_REF:0000107
RGD
Ensembl
PMID:15182862 GO_REF:0000107, MGI:MGI:3044494 NCBI chr 8:117,117,430...117,118,528
Ensembl chr 8:117,117,430...117,118,522
JBrowse link
G Il1a interleukin 1 alpha IEP RGD PMID:16524844 RGD:2311096 NCBI chr 3:121,824,712...121,836,122
Ensembl chr 3:121,825,412...121,836,086
JBrowse link
G Il1b interleukin 1 beta IEP RGD PMID:16524844 RGD:2311096 NCBI chr 3:121,876,256...121,882,637
Ensembl chr 3:121,876,263...121,882,726
JBrowse link
G Il6r interleukin 6 receptor IEP RGD PMID:14751512 RGD:1625440 NCBI chr 2:189,196,180...189,255,987
Ensembl chr 2:189,205,701...189,254,628
JBrowse link
G Lig4 DNA ligase 4 ISO MGI:MGI:1857732 (MGI:MGI:1312981|PMID:9823897), (MGI:MGI:1860400|PMID:10911993) RGD PMID:9823897, PMID:10911993 MGI:MGI:1312981, MGI:MGI:1860400 NCBI chr16:85,331,771...85,339,496
Ensembl chr16:85,331,866...85,337,769
JBrowse link
G Men1 menin 1 ISO (PMID:12874027) RGD PMID:12874027 NCBI chr 1:221,704,394...221,710,343
Ensembl chr 1:221,704,493...221,710,331
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO
ISS
(PMID:19179467)
GO_REF:0000024
RGD
UniProt
PMID:19179467 GO_REF:0000024 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 IEP RGD PMID:14994994 RGD:10414067 NCBI chr13:98,857,255...98,889,444
Ensembl chr13:98,857,177...98,889,716
JBrowse link
G Pml PML nuclear body scaffold ISO MGI:MGI:104662|MGI:MGI:2429949 (MGI:MGI:1306978|PMID:9806545), (MGI:MGI:3701394|PMID:11025664) RGD PMID:9806545, PMID:11025664 MGI:MGI:1306978, MGI:MGI:3701394 NCBI chr 8:63,002,515...63,034,310
Ensembl chr 8:63,004,870...63,034,226
JBrowse link
G Polb DNA polymerase beta IEP RGD PMID:12425958 RGD:8694104 NCBI chr16:74,237,001...74,260,272
Ensembl chr16:74,237,001...74,260,271
JBrowse link
G Polg DNA polymerase gamma, catalytic subunit IEP RGD PMID:12425958 RGD:8694104 NCBI chr 1:141,172,117...141,188,893
Ensembl chr 1:141,172,531...141,188,031
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 ISO
ISS
(MGI:MGI:4822286|PMID:20647423)
GO_REF:0000024
RGD
UniProt
PMID:20647423 GO_REF:0000024, MGI:MGI:4822286 NCBI chr 2:54,857,688...54,893,404
Ensembl chr 2:54,857,688...54,893,404
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit ISO MGI:MGI:2383951 (MGI:MGI:1290043|PMID:9768755) RGD PMID:9768755 MGI:MGI:1290043 NCBI chr11:89,293,547...89,510,948
Ensembl chr11:89,293,696...89,510,871
JBrowse link
G Ptprc protein tyrosine phosphatase, receptor type, C IDA RGD PMID:17290791 RGD:1599984 NCBI chr13:55,061,561...55,174,150
Ensembl chr13:55,061,562...55,173,692
JBrowse link
G Socs3 suppressor of cytokine signaling 3 IEP RGD PMID:14751512, PMID:16937495 RGD:1625440, RGD:2298916 NCBI chr10:106,973,863...106,976,969
Ensembl chr10:106,975,178...106,976,040
JBrowse link
G Sod2 superoxide dismutase 2 ISO MGI:MGI:104887|MGI:MGI:98352 (MGI:MGI:3044494|PMID:15182862) RGD PMID:15182862 MGI:MGI:3044494 NCBI chr 1:47,914,757...47,921,587
Ensembl chr 1:47,914,759...47,921,587
JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase ISO MGI:MGI:4391656 (MGI:MGI:5498602|PMID:23726973) RGD PMID:23726973 MGI:MGI:5498602 NCBI chr 4:159,635,145...159,654,108
Ensembl chr 4:159,635,153...159,654,063
JBrowse link
G Top1 DNA topoisomerase I IEP RGD PMID:2853856 RGD:2317066 NCBI chr 3:156,635,688...156,717,686
Ensembl chr 3:156,642,464...156,717,686
JBrowse link
G Tp53 tumor protein p53 ISO (PMID:7958916)
MGI:MGI:1857590 (MGI:MGI:3032464|PMID:14744935), (MGI:MGI:3722566|PMID:17068116)
RGD PMID:7958916, PMID:14744935, PMID:17068116 MGI:MGI:3032464, MGI:MGI:3722566 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
G Trim13 tripartite motif-containing 13 ISO (PMID:21333377) RGD PMID:21333377 NCBI chr15:41,897,191...41,936,545
Ensembl chr15:41,927,241...41,935,718
JBrowse link
G Xrcc2 X-ray repair cross complementing 2 ISO MGI:MGI:3654106 (MGI:MGI:3652689|PMID:16777961) RGD PMID:16777961 MGI:MGI:3652689 NCBI chr 4:5,842,013...5,860,516
Ensembl chr 4:5,841,998...5,860,527
JBrowse link
G Xrcc4 X-ray repair cross complementing 4 ISO MGI:MGI:1926771 (MGI:MGI:1913213|PMID:9875844) RGD PMID:9875844 MGI:MGI:1913213 NCBI chr 2:18,674,496...18,927,463
Ensembl chr 2:18,677,220...18,927,365
JBrowse link
response to high light intensity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mmp9 matrix metallopeptidase 9 IEP RGD PMID:17854381 RGD:8547925 NCBI chr 3:161,413,410...161,421,473
Ensembl chr 3:161,413,298...161,421,520
JBrowse link
G Rdh13 retinol dehydrogenase 13 ISO MGI:MGI:5467544 (MGI:MGI:5462166|PMID:22605914) RGD PMID:22605914 MGI:MGI:5462166 NCBI chr 1:72,956,017...72,983,811
Ensembl chr 1:72,956,026...72,984,350
JBrowse link
response to ionizing radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1b ATP-binding cassette, subfamily B (MDR/TAP), member 1B IEP RGD PMID:16494520 RGD:1598565 NCBI chr 4:22,225,123...22,307,577
Ensembl chr 4:22,133,521...22,425,515
JBrowse link
G Abcg5 ATP binding cassette subfamily G member 5 IEP RGD PMID:17132608 RGD:1598660 NCBI chr 6:7,935,771...7,961,207
Ensembl chr 6:7,935,771...7,961,207
JBrowse link
G Abraxas1 abraxas 1, BRCA1 A complex subunit IEA
ISO
ISS
GO_REF:0000107
(PMID:17525340), (PMID:17643121), (PMID:19261748)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:17525340, PMID:17643121, PMID:19261748 GO_REF:0000024, GO_REF:0000107 NCBI chr14:10,424,674...10,439,010
Ensembl chr14:10,424,674...10,439,003
JBrowse link
G Aen apoptosis enhancing nuclease ISO
ISS
(PMID:16171785)
GO_REF:0000024
RGD
UniProt
PMID:16171785 GO_REF:0000024 NCBI chr 1:140,584,328...140,593,749
Ensembl chr 1:140,584,380...140,593,745
JBrowse link
G Alad aminolevulinate dehydratase IEP 131Iodine RGD PMID:17916974 RGD:4144160 NCBI chr 5:78,368,867...78,379,206
Ensembl chr 5:78,368,867...78,379,346
JBrowse link
G Atm ATM serine/threonine kinase ISO (PMID:11375976), (PMID:9733515)
MGI:MGI:3605986|MGI:MGI:894697|MGI:MGI:99702 (MGI:MGI:1352316|PMID:10639175), (MGI:MGI:3836659|PMID:19061978)
RGD PMID:9733515, PMID:10639175, PMID:11375976, PMID:19061978 MGI:MGI:1352316, MGI:MGI:3836659 NCBI chr 8:58,015,938...58,119,973
Ensembl chr 8:58,015,940...58,120,045
JBrowse link
G Babam1 BRISC and BRCA1 A complex member 1 ISS
ISO
GO_REF:0000024
(PMID:19261748), (PMID:19261749)
UniProt
RGD
PMID:19261748, PMID:19261749 GO_REF:0000024 NCBI chr16:19,792,720...19,798,886
Ensembl chr16:19,792,838...19,798,894
JBrowse link
G Babam2 BRISC and BRCA1 A complex member 2 ISS
ISO
GO_REF:0000024
(PMID:19261748), (PMID:19261749)
UniProt
RGD
PMID:19261748, PMID:19261749 GO_REF:0000024 NCBI chr 6:25,666,654...26,135,888
Ensembl chr 6:25,666,655...26,051,229
JBrowse link
G Bax BCL2 associated X, apoptosis regulator ISO MGI:MGI:107202|MGI:MGI:1857429 (MGI:MGI:1352316|PMID:10639175), (MGI:MGI:3512739|PMID:15578100) RGD PMID:10639175, PMID:15578100 MGI:MGI:1352316, MGI:MGI:3512739 NCBI chr 1:101,451,801...101,457,207
Ensembl chr 1:101,451,802...101,457,207
JBrowse link
G Brat1 BRCA1-associated ATM activator 1 ISO (PMID:16452482) RGD PMID:16452482 NCBI chr12:16,016,062...16,028,534
Ensembl chr12:16,015,771...16,027,881
JBrowse link
G Brca1 BRCA1, DNA repair associated IEA
ISO
GO_REF:0000107
(PMID:17525340), (PMID:17643121), (PMID:19261748)
Ensembl
RGD
PMID:17525340, PMID:17643121, PMID:19261748 GO_REF:0000107 NCBI chr10:89,394,821...89,455,093
Ensembl chr10:89,394,803...89,454,681
JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex, subunit 3 ISS
ISO
GO_REF:0000024
(PMID:17525341), (PMID:19261746), (PMID:19261748)
UniProt
RGD
PMID:17525341, PMID:19261746, PMID:19261748 GO_REF:0000024 NCBI chr 9:9,863,380...9,865,920
Ensembl chr 9:9,863,404...9,865,920
JBrowse link
G Brsk1 BR serine/threonine kinase 1 NOT ISO (PMID:15150265) RGD PMID:15150265 NCBI chr 1:72,701,281...72,727,061
Ensembl chr 1:72,701,610...72,727,112
JBrowse link
G Brsk2 BR serine/threonine kinase 2 NOT ISS PMID:15150265 UniProt PMID:15150265 RGD:8554801 NCBI chr 1:214,918,757...214,940,883
Ensembl chr 1:214,927,172...214,947,624
JBrowse link
G Ccr5 C-C motif chemokine receptor 5 IEP RGD PMID:16937495 RGD:2298916 NCBI chr 8:133,192,398...133,215,599
Ensembl chr 8:133,197,032...133,215,614
JBrowse link
G Clk2 CDC-like kinase 2 ISO (PMID:20682768) RGD PMID:20682768 NCBI chr 2:188,476,789...188,488,809
Ensembl chr 2:188,476,820...188,496,191
JBrowse link
G Cop1 COP1, E3 ubiquitin ligase ISO (PMID:19805145) RGD PMID:19805145 NCBI chr13:76,942,883...77,076,015
Ensembl chr13:76,942,928...77,075,723
JBrowse link
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 IEP enriched uranium RGD PMID:18821396 RGD:4770368 NCBI chr 8:62,798,317...62,809,848
Ensembl chr 8:62,779,875...62,809,893
JBrowse link
G Cyp17a1 cytochrome P450, family 17, subfamily a, polypeptide 1 IEP enriched uranium RGD PMID:18821396 RGD:4770368 NCBI chr 1:266,422,127...266,429,947
Ensembl chr 1:266,422,132...266,428,239
JBrowse link
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 IEP enriched uranium RGD PMID:18821396 RGD:4770368 NCBI chr 8:58,744,849...58,772,408
Ensembl chr 8:58,744,849...58,772,408
JBrowse link
G Cyp2r1 cytochrome P450, family 2, subfamily r, polypeptide 1 IEP RGD PMID:16806633 RGD:1601035 NCBI chr 1:184,060,521...184,106,604
Ensembl chr 1:184,093,920...184,106,200
JBrowse link
G Dclre1c DNA cross-link repair 1C ISO MGI:MGI:2667614 (MGI:MGI:2447929|PMID:12504013), (MGI:MGI:3514096|PMID:12615897) RGD PMID:12504013, PMID:12615897 MGI:MGI:2447929, MGI:MGI:3514096 NCBI chr17:78,782,512...78,812,140
Ensembl chr17:78,783,437...78,812,111
JBrowse link
G Dmc1 DNA meiotic recombinase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:120,796,217...120,840,524
Ensembl chr 7:120,796,217...120,839,577
JBrowse link
G Dnmt1 DNA methyltransferase 1 IEP RGD PMID:17148264 RGD:1601086 NCBI chr 8:21,922,515...21,968,495
Ensembl chr 8:21,922,515...21,968,495
JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha IEP RGD PMID:17148264 RGD:1601086 NCBI chr 6:28,205,375...28,346,052
Ensembl chr 6:28,235,695...28,340,577
JBrowse link
G Dnmt3b DNA methyltransferase 3 beta IEP RGD PMID:17148264 RGD:1601086 NCBI chr 3:149,131,541...149,170,061
Ensembl chr 3:149,131,785...149,208,786
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 ISO (PMID:19234442) RGD PMID:19234442 NCBI chr 5:4,275,728...4,495,525
Ensembl chr 5:4,373,626...4,513,142
JBrowse link
G Eya3 EYA transcriptional coactivator and phosphatase 3 ISO (PMID:19234442) RGD PMID:19234442 NCBI chr 5:150,833,754...150,915,390
Ensembl chr 5:150,787,043...150,913,757
JBrowse link
G Icam1 intercellular adhesion molecule 1 IEP gamma irradiation RGD PMID:20385203 RGD:4145425 NCBI chr 8:22,035,287...22,047,049
Ensembl chr 8:22,035,256...22,047,059
JBrowse link
G Inip INTS3 and NABP interacting protein ISO (PMID:19605351), (PMID:19683501) RGD PMID:19605351, PMID:19683501 NCBI chr 5:77,016,871...77,031,106
Ensembl chr 5:77,019,431...77,031,120
JBrowse link
G Ints3 integrator complex subunit 3 ISO (PMID:19605351), (PMID:19683501) RGD PMID:19605351, PMID:19683501 NCBI chr 2:189,766,927...189,818,327
Ensembl chr 2:189,766,735...189,818,224
JBrowse link
G Kat5 lysine acetyltransferase 5 IEA
ISO
GO_REF:0000107
(PMID:18397884)
Ensembl
RGD
PMID:18397884 GO_REF:0000107 NCBI chr 1:220,967,795...220,974,596
Ensembl chr 1:220,967,796...220,974,597
JBrowse link
G Krt14 keratin 14 IEP RGD PMID:12793764 RGD:1600177 NCBI chr10:88,118,029...88,122,233
Ensembl chr10:88,055,823...88,122,233
JBrowse link
G Lig4 DNA ligase 4 ISO MGI:MGI:1857732 (MGI:MGI:1859491|PMID:10823907), (MGI:MGI:4943978|PMID:21390131) RGD PMID:10823907, PMID:21390131 MGI:MGI:1859491, MGI:MGI:4943978 NCBI chr16:85,331,771...85,339,496
Ensembl chr16:85,331,866...85,337,769
JBrowse link
G LOC100302465 hypothetical LOC100302465 ISO (MGI:MGI:4455105|PMID:20154723) RGD PMID:20154723 MGI:MGI:4455105 NCBI chr 1:206,324,763...206,417,143
Ensembl chr 1:206,324,765...206,417,143
JBrowse link
G Lzic leucine zipper and CTNNBIP1 domain containing IEP RGD PMID:19444910 RGD:2314410 NCBI chr 5:166,430,305...166,443,485
Ensembl chr 5:166,430,400...166,442,284
JBrowse link
G Mecp2 methyl CpG binding protein 2 IEP RGD PMID:17148264 RGD:1601086 NCBI chr  X:156,650,389...156,713,813
Ensembl chr  X:156,655,960...156,705,233
JBrowse link
G Mrnip MRN complex interacting protein ISO (PMID:27568553) RGD PMID:27568553 NCBI chr10:35,680,687...35,704,685
Ensembl chr10:35,680,658...35,704,776
JBrowse link
G Mta1 metastasis associated 1 IEA
IBA
ISS
ISO
GO_REF:0000107
PMID:21873635
GO_REF:0000024
(MGI:MGI:4366101|PMID:19805145)
(PMID:19805145)
Ensembl
UniProt
RGD
PMID:19805145, PMID:21873635 GO_REF:0000024, GO_REF:0000107, MGI:MGI:4366101, RGD:13792537 NCBI chr 6:137,911,302...137,950,066
Ensembl chr 6:137,924,293...137,950,075
JBrowse link
G Nabp1 nucleic acid binding protein 1 ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:19605351), (PMID:19683501)
UniProt
RGD
PMID:19605351, PMID:19683501, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 9:55,049,893...55,057,784
Ensembl chr 9:55,050,203...55,057,658
JBrowse link
G Nabp2 nucleic acid binding protein 2 IEA
IBA
ISO
ISS
GO_REF:0000107
PMID:21873635
(PMID:19605351), (PMID:19683501)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:19605351, PMID:19683501, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr 7:2,820,006...2,825,627
Ensembl chr 7:2,820,007...2,825,608
JBrowse link
G Nek1 NIMA-related kinase 1 ISO MGI:MGI:1858122 (MGI:MGI:3522367|PMID:15604234) RGD PMID:15604234 MGI:MGI:3522367 NCBI chr16:32,321,010...32,439,421
Ensembl chr16:32,321,010...32,439,421
JBrowse link
G Nes nestin IEP RGD PMID:12445635 RGD:1642076 NCBI chr 2:187,343,109...187,352,972
Ensembl chr 2:187,344,056...187,352,969
JBrowse link
G Nhej1 nonhomologous end-joining factor 1 ISO
ISS
(PMID:16439205) RGD PMID:16439205, PMID:16439205 RGD:8553261 NCBI chr 9:82,230,230...82,327,923
Ensembl chr 9:82,230,232...82,327,534
JBrowse link
G Paxip1 PAX interacting protein 1 ISO (PMID:15456759) RGD PMID:15456759 NCBI chr 4:3,956,931...4,008,326
Ensembl chr 4:3,959,640...4,008,326
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit ISO MGI:MGI:1857934 (MGI:MGI:5014034|PMID:20150414) RGD PMID:20150414 MGI:MGI:5014034 NCBI chr11:89,293,547...89,510,948
Ensembl chr11:89,293,696...89,510,871
JBrowse link
G Rad51 RAD51 recombinase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:110,918,240...110,942,920
Ensembl chr 3:110,918,243...110,942,917
JBrowse link
G Rad54b RAD54 homolog B ISO MGI:MGI:107202|MGI:MGI:3617695|MGI:MGI:894697 (MGI:MGI:3615835|PMID:16428451), (MGI:MGI:3836659|PMID:19061978) RGD PMID:16428451, PMID:19061978 MGI:MGI:3615835, MGI:MGI:3836659 NCBI chr 5:25,140,531...25,214,469
Ensembl chr 5:25,146,949...25,214,376
JBrowse link
G Rad54l RAD54 like ISO MGI:MGI:107202|MGI:MGI:2183934|MGI:MGI:3605986 (MGI:MGI:3615835|PMID:16428451), (MGI:MGI:3836659|PMID:19061978), (MGI:MGI:5014034|PMID:20150414) RGD PMID:16428451, PMID:19061978, PMID:20150414 MGI:MGI:3615835, MGI:MGI:3836659, MGI:MGI:5014034 NCBI chr 5:134,948,511...134,978,125
Ensembl chr 5:134,948,512...134,978,125
JBrowse link
G Rfwd3 ring finger and WD repeat domain 3 ISO (PMID:20173098) RGD PMID:20173098 NCBI chr19:42,960,597...42,971,894
Ensembl chr19:42,964,586...42,972,101
JBrowse link
G Rnf168 ring finger protein 168 ISS
ISO
IEA
GO_REF:0000024
(PMID:19203578), (PMID:19203579)
GO_REF:0000104
UniProt
RGD
PMID:19203578, PMID:19203579 GO_REF:0000024, GO_REF:0000104 NCBI chr11:71,721,242...71,743,421
Ensembl chr11:71,721,250...71,743,421
JBrowse link
G Rnf8 ring finger protein 8 ISS
ISO
IEA
GO_REF:0000024
(PMID:18001824), (PMID:18001825)
GO_REF:0000104
UniProt
RGD
PMID:18001824, PMID:18001825 GO_REF:0000024, GO_REF:0000104 NCBI chr20:8,285,380...8,309,858
Ensembl chr20:8,285,296...8,309,908
JBrowse link
G Rrm1 ribonucleotide reductase catalytic subunit M1 IEP RGD PMID:19444910 RGD:2314410 NCBI chr 1:167,538,387...167,562,688
Ensembl chr 1:167,538,263...167,562,688
JBrowse link
G Star steroidogenic acute regulatory protein IEP enriched uranium RGD PMID:18821396 RGD:4770368 NCBI chr16:71,036,204...71,040,847
Ensembl chr16:71,036,204...71,040,847
JBrowse link
G Stk11 serine/threonine kinase 11 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5284815|PMID:12234250)
Ensembl
UniProt
RGD
PMID:12234250 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5284815 NCBI chr 7:12,440,751...12,457,513
Ensembl chr 7:12,440,751...12,457,513
JBrowse link
G Ticrr TOPBP1-interacting checkpoint and replication regulator IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:141,391,738...141,433,615
Ensembl chr 1:141,391,262...141,433,109
JBrowse link
G Top2a DNA topoisomerase II alpha IEP RGD PMID:22965249 RGD:13432139 NCBI chr10:86,901,467...86,930,947
Ensembl chr10:86,901,007...86,932,154
JBrowse link
G Topbp1 DNA topoisomerase II binding protein 1 ISO (PMID:12773567) RGD PMID:12773567 NCBI chr 8:111,790,655...111,835,224
Ensembl chr 8:111,790,678...111,827,151
JBrowse link
G Tp53bp2 tumor protein p53 binding protein, 2 ISO MGI:MGI:3625686 (MGI:MGI:3624572|PMID:16702401) RGD PMID:16702401 MGI:MGI:3624572 NCBI chr13:100,817,206...100,873,837
Ensembl chr13:100,817,359...100,873,890
JBrowse link
G Uimc1 ubiquitin interaction motif containing 1 ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:17525340), (PMID:17525341), (PMID:17525342), (PMID:17643121), (PMID:19261748)
UniProt
Ensembl
RGD
PMID:17525340, PMID:17525341, PMID:17525342, PMID:17643121, PMID:19261748 GO_REF:0000024, GO_REF:0000107 NCBI chr17:10,061,915...10,130,921
Ensembl chr17:10,065,947...10,130,907
JBrowse link
G Usp28 ubiquitin specific peptidase 28 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:16901786)
Ensembl
UniProt
RGD
PMID:16901786 GO_REF:0000024, GO_REF:0000107 NCBI chr 8:53,295,188...53,355,572
Ensembl chr 8:53,295,222...53,355,572
JBrowse link
G Vcam1 vascular cell adhesion molecule 1 IEP RGD PMID:19714308 RGD:2312872 NCBI chr 2:219,071,193...219,090,931
Ensembl chr 2:219,071,193...219,097,619
JBrowse link
G Xrcc4 X-ray repair cross complementing 4 ISO MGI:MGI:1926771|MGI:MGI:3047571|MGI:MGI:3641440 (MGI:MGI:3761960|PMID:17713479) RGD PMID:17713479 MGI:MGI:3761960 NCBI chr 2:18,674,496...18,927,463
Ensembl chr 2:18,677,220...18,927,365
JBrowse link
G Xrcc6 X-ray repair cross complementing 6 ISO MGI:MGI:2179954|MGI:MGI:3625858 (MGI:MGI:3613277|PMID:15979950), (MGI:MGI:5007842|PMID:21568942) RGD PMID:15979950, PMID:21568942 MGI:MGI:3613277, MGI:MGI:5007842 NCBI chr 7:123,259,881...123,280,613
Ensembl chr 7:123,259,761...123,280,612
JBrowse link
response to light intensity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdnf brain-derived neurotrophic factor IEP RGD PMID:21076359 RGD:8655612 NCBI chr 3:100,768,637...100,819,216
Ensembl chr 3:100,768,637...100,819,210
JBrowse link
G Cat catalase IEP RGD PMID:17514533 RGD:9107626 NCBI chr 3:93,379,872...93,412,058
Ensembl chr 3:93,379,874...93,412,058
JBrowse link
G Cntf ciliary neurotrophic factor IEP RGD PMID:21076359 RGD:8655612 NCBI chr 1:229,599,009...229,601,032
Ensembl chr 1:229,599,009...229,601,032
JBrowse link
G Ext1 exostosin glycosyltransferase 1 ISO (MGI:MGI:5315031|PMID:22411800) RGD PMID:22411800 MGI:MGI:5315031 NCBI chr 7:92,605,008...92,881,392
Ensembl chr 7:92,605,728...92,882,068
JBrowse link
G Gnat1 G protein subunit alpha transducin 1 IDA RGD PMID:11931744 RGD:1599009 NCBI chr 8:116,433,302...116,438,038
Ensembl chr 8:116,433,302...116,438,038
JBrowse link
G Gnat2 G protein subunit alpha transducin 2 IDA RGD PMID:17591908 RGD:2302146 NCBI chr 2:210,880,754...210,890,765
Ensembl chr 2:210,880,777...210,889,881
JBrowse link
G Kcnc1 potassium voltage-gated channel subfamily C member 1 IEP RGD PMID:18708127 RGD:9685740 NCBI chr 1:102,414,352...102,456,718
Ensembl chr 1:102,414,625...102,456,411
JBrowse link
G Kcnc2 potassium voltage-gated channel subfamily C member 2 IEP RGD PMID:18708127 RGD:9685740 NCBI chr 7:54,978,453...55,159,362
Ensembl chr 7:54,980,120...55,159,351
JBrowse link
G Mt-nd3 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 3 IEP RGD PMID:15277468 RGD:2302310 NCBI chr MT:9,451...9,798
Ensembl chr MT:9,451...9,798
JBrowse link
response to light stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aanat aralkylamine N-acetyltransferase IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:18001324, PMID:21873635 RGD:2301033, RGD:13792537 NCBI chr10:105,568,091...105,572,407
Ensembl chr10:105,568,091...105,572,403
JBrowse link
G Asns asparagine synthetase (glutamine-hydrolyzing) IEP transpupillary thermotherapy laser RGD PMID:16885923 RGD:2302304 NCBI chr 4:33,742,876...33,761,106
Ensembl chr 4:33,743,364...33,761,163
JBrowse link
G Bdnf brain-derived neurotrophic factor IEP RGD PMID:17640634 RGD:8655603 NCBI chr 3:100,768,637...100,819,216
Ensembl chr 3:100,768,637...100,819,210
JBrowse link
G Bhlhe40 basic helix-loop-helix family, member e40 IDA
IEP
ISO
PMID:12397359
(PMID:15038852)
RGD PMID:15038852, PMID:12397359, PMID:12397359 RGD:625726, RGD:625726 NCBI chr 4:140,703,619...140,709,319
Ensembl chr 4:140,703,619...140,709,319
JBrowse link
G Clock clock circadian regulator IEP RGD PMID:10471199 RGD:10401879 NCBI chr14:34,418,226...34,502,218
Ensembl chr14:34,446,616...34,502,218
JBrowse link
G Clu clusterin IEP RGD PMID:11803476 RGD:9062370 NCBI chr15:42,626,612...42,665,858
Ensembl chr15:42,640,146...42,665,857
JBrowse link
G Cry1 cryptochrome circadian regulator 1 ISS
ISO
GO_REF:0000024
(MGI:MGI:6294193|PMID:29561690)
UniProt
RGD
PMID:29561690 GO_REF:0000024, MGI:MGI:6294193 NCBI chr 7:24,534,593...24,634,098
Ensembl chr 7:24,534,615...24,634,097
JBrowse link
G Cry2 cryptochrome circadian regulator 2 ISO
ISS
(PMID:15751956)
(MGI:MGI:6294193|PMID:29561690)
GO_REF:0000024
RGD
UniProt
PMID:15751956, PMID:29561690 GO_REF:0000024, MGI:MGI:6294193 NCBI chr 3:81,314,151...81,344,143
Ensembl chr 3:81,314,149...81,344,110
JBrowse link
G Dnm2 dynamin 2 IEP RGD PMID:22666495 RGD:9685159 NCBI chr 8:22,458,869...22,540,649
Ensembl chr 8:22,458,899...22,540,524
JBrowse link
G Drd2 dopamine receptor D2 ISO MGI:MGI:2387895 (MGI:MGI:3639799|PMID:16715079) RGD PMID:16715079 MGI:MGI:3639799 NCBI chr 8:53,678,777...53,743,643
Ensembl chr 8:53,678,777...53,743,642
JBrowse link
G Dusp1 dual specificity phosphatase 1 IEP RGD PMID:15527789 RGD:2298681 NCBI chr10:16,970,642...16,973,425
Ensembl chr10:16,970,626...16,973,418
JBrowse link
G Dynlrb1 dynein light chain roadblock-type 1 IEP RGD PMID:10816553 RGD:633064 NCBI chr 3:150,761,329...150,782,493
Ensembl chr 3:150,761,329...150,782,493
JBrowse link
G Elk1 ETS transcription factor ELK1 IDA RGD PMID:10383826 RGD:7488912 NCBI chr  X:1,287,875...1,304,822
Ensembl chr  X:1,297,099...1,304,822
JBrowse link
G Fech ferrochelatase ISO MGI:MGI:1858114 (MGI:MGI:50545|PMID:1939658) RGD PMID:1939658 MGI:MGI:50545 NCBI chr18:59,941,992...59,975,192
Ensembl chr18:59,941,992...59,975,192
JBrowse link
G Fmr1 FMRP translational regulator 1 IEP RGD PMID:15564573 RGD:1601175 NCBI chr  X:154,684,924...154,722,369
Ensembl chr  X:154,684,935...154,722,314
JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit IEP RGD PMID:11146118 RGD:2293791 NCBI chr 6:109,300,433...109,303,299
Ensembl chr 6:109,300,433...109,303,299
JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit IEP RGD PMID:11146118 RGD:2293791 NCBI chr 6:25,598,936...25,616,995
Ensembl chr 6:25,598,936...25,616,995
JBrowse link
G Gh1 growth hormone 1 IDA RGD PMID:19091612 RGD:2315626 NCBI chr10:94,486,204...94,488,181
Ensembl chr10:94,486,205...94,488,180
JBrowse link
G Gja10 gap junction protein, alpha 10 ISO MGI:MGI:3043946 (MGI:MGI:3654563|PMID:16820008) RGD PMID:16820008 MGI:MGI:3654563 NCBI chr 5:47,819,484...47,841,138
Ensembl chr 5:47,835,066...47,836,586
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A IEP RGD PMID:19850826 RGD:2325946 NCBI chr10:5,707,806...6,123,568
Ensembl chr10:5,930,298...6,119,990
JBrowse link
G Grk1 G protein-coupled receptor kinase 1 IEP
ISO
MGI:MGI:2668595 (MGI:MGI:1334014|PMID:10097103) RGD PMID:10097103, PMID:3950623 MGI:MGI:1334014, RGD:1600007 NCBI chr16:81,153,489...81,165,442
Ensembl chr16:81,153,489...81,165,442
JBrowse link
G Junb JunB proto-oncogene, AP-1 transcription factor subunit IEP RGD PMID:11146118 RGD:2293791 NCBI chr19:26,092,972...26,094,756
Ensembl chr19:26,092,974...26,094,756
JBrowse link
G Jund JunD proto-oncogene, AP-1 transcription factor subunit IEP RGD PMID:11146118 RGD:2293791 NCBI chr16:20,485,028...20,486,707
Ensembl chr16:20,485,029...20,486,707
JBrowse link
G Kmt2a lysine methyltransferase 2A ISO MGI:MGI:3839794 (MGI:MGI:5638946|PMID:25834037) RGD PMID:25834037 MGI:MGI:5638946 NCBI chr 8:49,110,407...49,185,872
Ensembl chr 8:49,114,990...49,158,971
JBrowse link
G Mapk10 mitogen activated protein kinase 10 ISS
ISO
GO_REF:0000024
(MGI:MGI:5431019|PMID:22441692)
UniProt
RGD
PMID:22441692 GO_REF:0000024, MGI:MGI:5431019 NCBI chr14:8,079,955...8,371,508
Ensembl chr14:8,080,275...8,368,254
JBrowse link
G Mat2a methionine adenosyltransferase 2A IEP RGD PMID:15504733 RGD:1598692 NCBI chr 4:100,297,478...100,303,047
Ensembl chr 4:100,296,075...100,303,080
JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 IEP RGD PMID:17640634 RGD:8655603 NCBI chr17:5,934,651...6,245,778
Ensembl chr17:5,933,729...6,244,676
JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase IEP RGD PMID:15979612 RGD:8694099 NCBI chr 4:145,282,828...145,289,367
Ensembl chr 4:145,282,797...145,289,326
JBrowse link
G Opn4 opsin 4 NOT ISO (MGI:MGI:5925970|PMID:26320947) RGD PMID:26320947 MGI:MGI:5925970 NCBI chr16:10,943,353...10,966,602
Ensembl chr16:10,943,341...10,952,549
JBrowse link
G Per1 period circadian regulator 1 ISO
IBA
(PMID:15038852)
PMID:21873635
RGD PMID:15038852, PMID:21873635 RGD:13792537 NCBI chr10:55,681,761...55,696,557
Ensembl chr10:55,687,050...55,695,994
JBrowse link
G Per2 period circadian regulator 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:98,555,154...98,597,362
Ensembl chr 9:98,555,169...98,597,359
JBrowse link
G Per3 period circadian regulator 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:168,088,126...168,123,482
Ensembl chr 5:168,086,998...168,123,395
JBrowse link
G Polg DNA polymerase gamma, catalytic subunit IEP RGD PMID:15979612 RGD:8694099 NCBI chr 1:141,172,117...141,188,893
Ensembl chr 1:141,172,531...141,188,031
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma ISO (MGI:MGI:3830801|PMID:19041764) RGD PMID:19041764 MGI:MGI:3830801 NCBI chr 4:147,274,055...147,399,383
Ensembl chr 4:147,274,107...147,399,380
JBrowse link
G Rho rhodopsin ISO MGI:MGI:2181812 (MGI:MGI:3655007|PMID:16723493) RGD PMID:16723493 MGI:MGI:3655007 NCBI chr 4:147,832,136...147,837,298
Ensembl chr 4:147,832,136...147,837,298
JBrowse link
G Ric8a RIC8 guanine nucleotide exchange factor A ISO MGI:MGI:3608888 (MGI:MGI:3692154|PMID:16221497) RGD PMID:16221497 MGI:MGI:3692154 NCBI chr 1:213,606,599...213,612,905
Ensembl chr 1:213,606,599...213,612,904
JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 IEP RGD PMID:17389522 RGD:9585654 NCBI chr 2:266,141,581...266,169,197
Ensembl chr 2:266,141,581...266,169,197
JBrowse link
G Slc1a2 solute carrier family 1 member 2 ISO MGI:MGI:2449707 (MGI:MGI:1203466|PMID:9539795) RGD PMID:9539795 MGI:MGI:1203466 NCBI chr 3:92,518,679...92,665,731
Ensembl chr 3:92,640,752...92,665,644
JBrowse link
G Slc1a3 solute carrier family 1 member 3 ISO
IEA
MGI:MGI:1931872 (MGI:MGI:1203466|PMID:9539795)
GO_REF:0000107
RGD
Ensembl
PMID:9539795 GO_REF:0000107, MGI:MGI:1203466 NCBI chr 2:57,860,881...57,935,363
Ensembl chr 2:57,860,834...57,935,363
JBrowse link
G Slc4a10 solute carrier family 4 member 10 ISO MGI:MGI:3774019 (MGI:MGI:3772751|PMID:18165320) RGD PMID:18165320 MGI:MGI:3772751 NCBI chr 3:47,995,812...48,287,897
Ensembl chr 3:47,995,959...48,287,910
JBrowse link
G Syne1 spectrin repeat containing nuclear envelope protein 1 IEP RGD PMID:8700883 RGD:632616 NCBI chr 1:41,608,287...41,763,591
NCBI chr 1:41,844,840...42,086,662
Ensembl chr 1:41,608,418...42,077,535
JBrowse link
G Th tyrosine hydroxylase IEP RGD PMID:21185915 RGD:5128767 NCBI chr 1:216,073,034...216,080,287
Ensembl chr 1:216,073,031...216,080,287
JBrowse link
response to low light intensity stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmgcs1 3-hydroxy-3-methylglutaryl-CoA synthase 1 IEP RGD PMID:1683769 RGD:2326143 NCBI chr 2:52,427,351...52,445,082
Ensembl chr 2:52,431,601...52,445,055
JBrowse link
G Prph2 peripherin 2 IEP RGD PMID:8320859 RGD:8553226 NCBI chr 9:16,085,933...16,386,176 JBrowse link
response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brsk1 BR serine/threonine kinase 1 ISO (PMID:15150265) RGD PMID:15150265 NCBI chr 1:72,701,281...72,727,061
Ensembl chr 1:72,701,610...72,727,112
JBrowse link
G Brsk2 BR serine/threonine kinase 2 ISS PMID:15150265 UniProt PMID:15150265 RGD:8554801 NCBI chr 1:214,918,757...214,940,883
Ensembl chr 1:214,927,172...214,947,624
JBrowse link
G Casp3 caspase 3 ISO MGI:MGI:109383 (MGI:MGI:3615714|PMID:16469926), (MGI:MGI:3691523|PMID:11092819) RGD PMID:11092819, PMID:16469926 MGI:MGI:3615714, MGI:MGI:3691523 NCBI chr16:48,845,011...48,863,249
Ensembl chr16:48,845,012...48,863,204
JBrowse link
G Casp7 caspase 7 ISO MGI:MGI:107739 (MGI:MGI:3615714|PMID:16469926) RGD PMID:16469926 MGI:MGI:3615714 NCBI chr 1:277,190,557...277,242,779
Ensembl chr 1:277,190,964...277,242,774
JBrowse link
G Casp9 caspase 9 ISO MGI:MGI:2158755 (MGI:MGI:3691523|PMID:11092819) RGD PMID:11092819 MGI:MGI:3691523 NCBI chr 5:160,356,211...160,373,774
Ensembl chr 5:160,355,833...160,373,778
JBrowse link
G Cat catalase IEP RGD PMID:12592055 RGD:9179775 NCBI chr 3:93,379,872...93,412,058
Ensembl chr 3:93,379,874...93,412,058
JBrowse link
G Ccar2 cell cycle and apoptosis regulator 2 ISO (PMID:23352644) RGD PMID:23352644 NCBI chr15:51,818,887...51,834,443
Ensembl chr15:51,818,897...51,834,030
JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A ISO MGI:MGI:1933751 (MGI:MGI:2675761|PMID:12952892) RGD PMID:12952892 MGI:MGI:2675761 NCBI chr20:6,348,422...6,358,864
Ensembl chr20:6,351,458...6,358,864
JBrowse link
G Cirbp cold inducible RNA binding protein ISO
ISS
(PMID:11574538)
GO_REF:0000024
RGD
UniProt
PMID:11574538 GO_REF:0000024 NCBI chr 7:12,400,066...12,405,054
Ensembl chr 7:12,401,207...12,405,022
JBrowse link
G Ddb2 damage specific DNA binding protein 2 ISO
IBA
(PMID:12732143)
PMID:21873635
RGD PMID:12732143, PMID:21873635 RGD:13792537 NCBI chr 3:80,030,437...80,052,984
Ensembl chr 3:80,030,437...80,052,953
JBrowse link
G Dtl denticleless E3 ubiquitin protein ligase homolog ISO (PMID:18794347) RGD PMID:18794347 NCBI chr13:110,219,276...110,257,345
Ensembl chr13:110,220,283...110,257,367
JBrowse link
G Elane elastase, neutrophil expressed ISO (PMID:11928814) RGD PMID:11928814 NCBI chr 7:12,638,320...12,640,168
Ensembl chr 7:12,638,322...12,640,232
JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit ISO
IBA
MGI:MGI:2183949 (MGI:MGI:3692802|PMID:17020410)
PMID:21873635
RGD PMID:17020410, PMID:21873635 MGI:MGI:3692802, RGD:13792537 NCBI chr 1:80,293,574...80,307,334
Ensembl chr 1:80,293,566...80,307,344
JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit ISO
IBA
(PMID:17509950)
PMID:21873635
RGD PMID:17509950, PMID:21873635 RGD:13792537 NCBI chr18:25,037,668...25,068,380
Ensembl chr18:25,037,625...25,068,389
JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit ISO (PMID:16678501) RGD PMID:16678501 NCBI chr10:2,010,140...2,037,953
Ensembl chr10:2,010,648...2,037,891
JBrowse link
G Ercc5 ERCC excision repair 5, endonuclease ISO MGI:MGI:3043589 (MGI:MGI:3041918|PMID:15082767)
(PMID:16167068), (PMID:8710877)
RGD PMID:8710877, PMID:15082767, PMID:16167068 MGI:MGI:3041918 NCBI chr 9:50,928,847...50,970,962
Ensembl chr 9:50,925,619...50,970,955
JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor ISO (PMID:16916636)
MGI:MGI:1932102 (MGI:MGI:3054497|PMID:15340056), (MGI:MGI:3655576|PMID:10843671)
RGD PMID:10843671, PMID:15340056, PMID:16916636 MGI:MGI:3054497, MGI:MGI:3655576 NCBI chr16:8,734,028...8,804,610
Ensembl chr16:8,734,035...8,804,610
JBrowse link
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit ISO MGI:MGI:2449180 (MGI:MGI:3054497|PMID:15340056)
(PMID:12732143), (PMID:7664335)
RGD PMID:7664335, PMID:12732143, PMID:15340056 MGI:MGI:3054497 NCBI chr 2:39,434,617...39,473,392
Ensembl chr 2:39,434,634...39,472,017
JBrowse link
G Hus1 HUS1 checkpoint clamp component ISO MGI:MGI:1927769 (MGI:MGI:2156961|PMID:11790307), (MGI:MGI:2449744|PMID:12529385) RGD PMID:11790307, PMID:12529385 MGI:MGI:2156961, MGI:MGI:2449744 NCBI chr14:89,194,086...89,208,825
Ensembl chr14:89,194,092...89,208,825
JBrowse link
G LOC100302465 hypothetical LOC100302465 ISO (MGI:MGI:5285148|PMID:20843368) RGD PMID:20843368 MGI:MGI:5285148 NCBI chr 1:206,324,763...206,417,143
Ensembl chr 1:206,324,765...206,417,143
JBrowse link
G Map2k7 mitogen activated protein kinase kinase 7 IEA
ISO
GO_REF:0000107
(PMID:9535930)
Ensembl
RGD
PMID:9535930 GO_REF:0000107 NCBI chr12:2,546,278...2,555,310
Ensembl chr12:2,548,218...2,555,164
JBrowse link
G Map4k3 mitogen-activated protein kinase kinase kinase kinase 3 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:9275185)
Ensembl
UniProt
RGD
PMID:9275185 GO_REF:0000024, GO_REF:0000107 NCBI chr 6:3,276,732...3,444,519
Ensembl chr 6:3,276,738...3,444,519
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 ISO
IEA
(PMID:14967141)
GO_REF:0000107
RGD
Ensembl
PMID:14967141 GO_REF:0000107 NCBI chr16:9,620,854...9,709,342
Ensembl chr16:9,625,177...9,709,347
JBrowse link
G Men1 menin 1 ISO (PMID:16690369) RGD PMID:16690369 NCBI chr 1:221,704,394...221,710,343
Ensembl chr 1:221,704,493...221,710,331
JBrowse link
G Msh6 mutS homolog 6 ISO MGI:MGI:1858014 (MGI:MGI:2677657|PMID:14632208) RGD PMID:14632208 MGI:MGI:2677657 NCBI chr 6:11,644,565...11,662,389
Ensembl chr 6:11,644,578...11,662,499
JBrowse link
G Pclaf PCNA clamp associated factor ISO
ISS
(PMID:23000965)
GO_REF:0000024
RGD
UniProt
PMID:23000965 GO_REF:0000024 NCBI chr 8:71,514,281...71,526,182
Ensembl chr 8:71,514,281...71,526,182
JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 ISO MGI:MGI:2678372 (MGI:MGI:2675761|PMID:12952892) RGD PMID:12952892 MGI:MGI:2675761 NCBI chr18:62,159,128...62,179,635
Ensembl chr18:62,174,670...62,181,102
JBrowse link
G Pml PML nuclear body scaffold ISO MGI:MGI:104662 (MGI:MGI:3580934|PMID:15626733) RGD PMID:15626733 MGI:MGI:3580934 NCBI chr 8:63,002,515...63,034,310
Ensembl chr 8:63,004,870...63,034,226
JBrowse link
G Primpol primase and DNA directed polymerase ISO
IBA
(PMID:24240614), (PMID:24267451)
PMID:21873635
RGD PMID:24240614, PMID:24267451, PMID:21873635 RGD:13792537 NCBI chr16:48,863,385...48,900,409
Ensembl chr16:48,863,418...48,897,795
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 ISO (MGI:MGI:4822286|PMID:20647423) RGD PMID:20647423 MGI:MGI:4822286 NCBI chr 2:54,857,688...54,893,404
Ensembl chr 2:54,857,688...54,893,404
JBrowse link
G Rad18 RAD18 E3 ubiquitin protein ligase ISO
IBA
MGI:MGI:3835812 (MGI:MGI:2448116|PMID:12509447)
PMID:21873635
RGD PMID:12509447, PMID:21873635 MGI:MGI:2448116, RGD:13792537 NCBI chr 4:144,537,329...144,620,606
Ensembl chr 4:144,536,729...144,620,731
JBrowse link
G Rev1 REV1, DNA directed polymerase ISO (PMID:11485998) RGD PMID:11485998 NCBI chr 9:44,714,137...44,786,330
Ensembl chr 9:44,714,386...44,786,041
JBrowse link
G Ro60 Ro60, Y RNA binding protein ISO MGI:MGI:2670227 (MGI:MGI:2668758|PMID:12788971), (MGI:MGI:5524977|PMID:14680639) RGD PMID:12788971, PMID:14680639 MGI:MGI:2668758, MGI:MGI:5524977 NCBI chr13:60,546,892...60,567,882
Ensembl chr13:60,546,912...60,567,882
JBrowse link
G Rpain RPA interacting protein ISO (PMID:16135809) RGD PMID:16135809 NCBI chr10:57,606,287...57,613,834
Ensembl chr10:57,606,650...57,613,747
JBrowse link
G Sprtn SprT-like N-terminal domain IEA
ISO
ISS
GO_REF:0000107
(PMID:22681887), (PMID:22894931), (PMID:22902628)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:22681887, PMID:22894931, PMID:22902628 GO_REF:0000024, GO_REF:0000107 NCBI chr19:57,649,901...57,657,158
Ensembl chr19:57,650,163...57,654,864
JBrowse link
G Tipin timeless interacting protein ISO (MGI:MGI:3706226|PMID:17141802) RGD PMID:17141802 MGI:MGI:3706226 NCBI chr 8:69,753,363...69,768,640
Ensembl chr 8:69,753,373...69,768,305
JBrowse link
G Tp53 tumor protein p53 IEP
ISO
MGI:MGI:1857590|MGI:MGI:1926340 (MGI:MGI:1858868|PMID:10815637), (MGI:MGI:2675761|PMID:12952892), (MGI:MGI:3032464|PMID:14744935), (MGI:MGI:3691523|PMID:11092819) RGD PMID:10815637, PMID:11092819, PMID:12952892, PMID:14744935, PMID:17724205 MGI:MGI:1858868, MGI:MGI:2675761, MGI:MGI:3032464, MGI:MGI:3691523, RGD:2290562 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
G Tp53i13 tumor protein p53 inducible protein 13 ISO (PMID:14767535) RGD PMID:14767535 NCBI chr10:62,650,640...62,655,327
Ensembl chr10:62,650,719...62,655,362
JBrowse link
G Trex1 three prime repair exonuclease 1 ISO MGI:MGI:3052754 (MGI:MGI:5908297|PMID:28351661) RGD PMID:28351661 MGI:MGI:5908297 NCBI chr 8:117,796,127...117,797,427
Ensembl chr 8:117,796,128...117,797,427
JBrowse link
G Trim32 tripartite motif-containing 32 ISO (MGI:MGI:5009403|PMID:16816390) RGD PMID:16816390 MGI:MGI:5009403 NCBI chr 5:81,431,554...81,449,023
Ensembl chr 5:81,431,600...81,442,451
JBrowse link
G Tyr tyrosinase IEP RGD PMID:6175546 RGD:8694330 NCBI chr 1:151,012,598...151,106,802
Ensembl chr 1:151,012,598...151,106,802
JBrowse link
G Uaca uveal autoantigen with coiled-coil domains and ankyrin repeats ISO MGI:MGI:3043446 (MGI:MGI:3056865|PMID:15271982) RGD PMID:15271982 MGI:MGI:3056865 NCBI chr 8:65,686,586...65,774,940
Ensembl chr 8:65,686,648...65,774,989
JBrowse link
G Ube2a ubiquitin-conjugating enzyme E2A ISO UniProtKB:P06104 (PMID:1717990) RGD PMID:1717990 NCBI chr  X:123,486,988...123,497,726
Ensembl chr  X:123,486,989...123,497,726
JBrowse link
G Ube2b ubiquitin-conjugating enzyme E2B ISO UniProtKB:P06104 (PMID:1717990) RGD PMID:1717990 NCBI chr10:37,439,947...37,454,867
Ensembl chr10:37,441,284...37,455,022
JBrowse link
G Ube4b ubiquitination factor E4B ISO (PMID:11802788) RGD PMID:11802788 NCBI chr 5:166,156,033...166,259,069
Ensembl chr 5:166,156,033...166,259,069
JBrowse link
G Usf1 upstream transcription factor 1 ISO (MGI:MGI:3525429|PMID:15358786) RGD PMID:15358786 MGI:MGI:3525429 NCBI chr13:89,797,750...89,805,561
Ensembl chr13:89,797,800...89,805,558
JBrowse link
G Usp1 ubiquitin specific peptidase 1 ISO
ISS
(PMID:18082604)
GO_REF:0000024
RGD
UniProt
PMID:18082604 GO_REF:0000024 NCBI chr 5:117,583,502...117,594,872
Ensembl chr 5:117,583,502...117,594,870
JBrowse link
G Uvssa UV-stimulated scaffold protein A ISS
IEA
IBA
ISO
GO_REF:0000024
GO_REF:0000107
PMID:21873635
(PMID:22466610), (PMID:22466611), (PMID:22466612)
UniProt
Ensembl
RGD
PMID:22466610, PMID:22466611, PMID:22466612, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr14:82,621,028...82,658,912
Ensembl chr14:82,623,050...82,658,891
JBrowse link
G Xpa XPA, DNA damage recognition and repair factor ISO MGI:MGI:1857939 (MGI:MGI:3655576|PMID:10843671) RGD PMID:10843671 MGI:MGI:3655576 NCBI chr 5:61,749,767...61,793,641
Ensembl chr 5:61,749,767...61,792,928
JBrowse link
G Zranb3 zinc finger RANBP2-type containing 3 ISO (PMID:22704558) RGD PMID:22704558 NCBI chr13:44,661,375...44,812,430
Ensembl chr13:44,661,398...44,798,543
JBrowse link
response to UV-A term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 ISO (PMID:18483258) RGD PMID:18483258 NCBI chr 6:137,218,398...137,239,970
Ensembl chr 6:137,218,376...137,236,258
JBrowse link
G Ccnd1 cyclin D1 ISO
ISS
(PMID:18483258)
GO_REF:0000024
RGD
UniProt
PMID:18483258 GO_REF:0000024 NCBI chr 1:218,090,750...218,100,447
Ensembl chr 1:218,090,750...218,100,325
JBrowse link
G Cryaa crystallin, alpha A ISO MGI:MGI:1858025 (MGI:MGI:1321356|PMID:9813033) RGD PMID:9813033 MGI:MGI:1321356 NCBI chr20:10,438,444...10,442,189
Ensembl chr20:10,438,444...10,442,187
JBrowse link
G Egfr epidermal growth factor receptor ISO (PMID:18483258) RGD PMID:18483258 NCBI chr14:99,919,485...100,104,136
Ensembl chr14:99,919,485...100,098,796
JBrowse link
response to UV-B term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2, apoptosis regulator ISO
IEA
MGI:MGI:1857430 (MGI:MGI:1330635|PMID:10200548)
GO_REF:0000107
RGD
Ensembl
PMID:10200548 GO_REF:0000107, MGI:MGI:1330635 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor ISO MGI:MGI:1932102 (MGI:MGI:1859141|PMID:10850428), (MGI:MGI:3699047|PMID:17145777) RGD PMID:10850428, PMID:17145777 MGI:MGI:1859141, MGI:MGI:3699047 NCBI chr16:8,734,028...8,804,610
Ensembl chr16:8,734,035...8,804,610
JBrowse link
G Hmgn1 high mobility group nucleosome binding domain 1 ISO MGI:MGI:3590648 (MGI:MGI:3590574|PMID:12660172) RGD PMID:12660172 MGI:MGI:3590574 NCBI chr11:36,474,028...36,479,947
Ensembl chr11:36,474,840...36,479,868
JBrowse link
G Il12a interleukin 12A ISO
IEA
(PMID:8992506)
GO_REF:0000107
RGD
Ensembl
PMID:8992506 GO_REF:0000107 NCBI chr 2:165,076,945...165,083,996
Ensembl chr 2:165,076,607...165,084,318
JBrowse link
G Il12b interleukin 12B ISO (PMID:8992506) RGD PMID:8992506 NCBI chr10:30,034,447...30,048,774
Ensembl chr10:30,038,709...30,048,085
JBrowse link
G Ivl involucrin ISO (PMID:16639001) RGD PMID:16639001 NCBI chr 2:192,761,171...192,773,346
Ensembl chr 2:192,761,538...192,763,577
JBrowse link
G Msh2 mutS homolog 2 ISO
IEA
MGI:MGI:1857940 (MGI:MGI:3487309|PMID:15166087)
GO_REF:0000107
RGD
Ensembl
PMID:15166087 GO_REF:0000107, MGI:MGI:3487309 NCBI chr 6:11,215,951...11,274,916
Ensembl chr 6:11,215,963...11,274,932
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit ISO (PMID:15616591) RGD PMID:15616591 NCBI chr 1:220,992,770...221,003,249
Ensembl chr 1:220,992,770...221,003,249
JBrowse link
G Tp53 tumor protein p53 IEP RGD PMID:22559303 RGD:8547754 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
G Xpc XPC complex subunit, DNA damage recognition and repair factor ISO MGI:MGI:1859840 (MGI:MGI:3034118|PMID:15010313) RGD PMID:15010313 MGI:MGI:3034118 NCBI chr 4:123,134,457...123,161,985
Ensembl chr 4:123,134,457...123,161,985
JBrowse link
response to UV-C term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bak1 BCL2-antagonist/killer 1 IEP RGD PMID:19520675 RGD:2316118 NCBI chr20:5,609,620...5,618,899
Ensembl chr20:5,609,625...5,618,260
JBrowse link
G Bcl3 BCL3, transcription coactivator ISO (PMID:16384933) RGD PMID:16384933 NCBI chr 1:80,730,758...80,745,273
Ensembl chr 1:80,730,499...80,744,831
JBrowse link
G Brca2 BRCA2, DNA repair associated ISO
IEA
MGI:MGI:1930616 (MGI:MGI:1203345|PMID:9660919)
GO_REF:0000107
RGD
Ensembl
PMID:9660919 GO_REF:0000107, MGI:MGI:1203345 NCBI chr12:503,660...544,754
Ensembl chr12:504,007...544,748
JBrowse link
G Dcun1d3 defective in cullin neddylation 1 domain containing 3 ISO
ISS
(PMID:18823379)
GO_REF:0000024
RGD
UniProt
PMID:18823379 GO_REF:0000024 NCBI chr 1:189,626,442...189,666,440
Ensembl chr 1:189,627,972...189,666,440
JBrowse link
G Ercc5 ERCC excision repair 5, endonuclease ISO (PMID:17208056) RGD PMID:17208056 NCBI chr 9:50,928,847...50,970,962
Ensembl chr 9:50,925,619...50,970,955
JBrowse link
G Hmgn1 high mobility group nucleosome binding domain 1 ISO (MGI:MGI:3590574|PMID:12660172) RGD PMID:12660172 MGI:MGI:3590574 NCBI chr11:36,474,028...36,479,947
Ensembl chr11:36,474,840...36,479,868
JBrowse link
G Map3k4 mitogen activated protein kinase kinase kinase 4 ISO (PMID:9305639) RGD PMID:9305639 NCBI chr 1:48,625,714...48,711,642
Ensembl chr 1:48,625,743...48,711,642
JBrowse link
G Polh DNA polymerase eta ISO (PMID:17563354) RGD PMID:17563354 NCBI chr 9:17,163,354...17,198,006
Ensembl chr 9:17,163,354...17,197,132
JBrowse link
G Wrn WRN RecQ like helicase ISO (PMID:17563354) RGD PMID:17563354 NCBI chr16:62,483,773...62,619,018
Ensembl chr16:62,483,761...62,615,375
JBrowse link
G Yy1 YY1 transcription factor ISO (PMID:18026119)
(MGI:MGI:5009388|PMID:18026119)
RGD PMID:18026119 MGI:MGI:5009388 NCBI chr 6:132,702,443...132,726,848
Ensembl chr 6:132,702,448...132,727,046
JBrowse link
response to X-ray term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa1 annexin A1 IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:9269316, PMID:21873635 RGD:2306948, RGD:13792537 NCBI chr 1:237,893,983...237,910,002
Ensembl chr 1:237,893,966...237,910,012
JBrowse link
G Blm BLM RecQ like helicase ISO (PMID:11309417) RGD PMID:11309417 NCBI chr 1:142,246,773...142,332,616
Ensembl chr 1:142,246,790...142,332,588
JBrowse link
G Brca2 BRCA2, DNA repair associated IEA
ISO
GO_REF:0000107
MGI:MGI:1930616|MGI:MGI:2177226|MGI:MGI:2448890 (MGI:MGI:1100157|PMID:9398843), (MGI:MGI:1203345|PMID:9660919), (MGI:MGI:3833141|PMID:16859999)
Ensembl
RGD
PMID:9398843, PMID:9660919, PMID:16859999 GO_REF:0000107, MGI:MGI:1100157, MGI:MGI:1203345, MGI:MGI:3833141 NCBI chr12:503,660...544,754
Ensembl chr12:504,007...544,748
JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex, subunit 3 ISO (PMID:14636569) RGD PMID:14636569 NCBI chr 9:9,863,380...9,865,920
Ensembl chr 9:9,863,404...9,865,920
JBrowse link
G Casp3 caspase 3 IEP RGD PMID:18239382 RGD:2293328 NCBI chr16:48,845,011...48,863,249
Ensembl chr16:48,845,012...48,863,204
JBrowse link
G Ccnd1 cyclin D1 IEP RGD PMID:17148264 RGD:1601086 NCBI chr 1:218,090,750...218,100,447
Ensembl chr 1:218,090,750...218,100,325
JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A IEP RGD PMID:18413982 RGD:8662408 NCBI chr20:6,348,422...6,358,864
Ensembl chr20:6,351,458...6,358,864
JBrowse link
G Col2a1 collagen type II alpha 1 chain IEP RGD PMID:17549535 RGD:8661655 NCBI chr 7:139,454,945...139,484,403
Ensembl chr 7:139,455,242...139,483,997
JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit ISO MGI:MGI:2183944 (MGI:MGI:3613277|PMID:15979950) RGD PMID:15979950 MGI:MGI:3613277 NCBI chr 1:80,256,973...80,268,198
Ensembl chr 1:80,256,973...80,268,198
JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor ISO MGI:MGI:1932102 (MGI:MGI:3613277|PMID:15979950), (MGI:MGI:3699047|PMID:17145777) RGD PMID:15979950, PMID:17145777 MGI:MGI:3613277, MGI:MGI:3699047 NCBI chr16:8,734,028...8,804,610
Ensembl chr16:8,734,035...8,804,610
JBrowse link
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit ISO MGI:MGI:2449180 (MGI:MGI:3699047|PMID:17145777) RGD PMID:17145777 MGI:MGI:3699047 NCBI chr 2:39,434,617...39,473,392
Ensembl chr 2:39,434,634...39,472,017
JBrowse link
G Fga fibrinogen alpha chain IEP RGD PMID:4170424 RGD:11040910 NCBI chr 2:181,997,562...182,013,726
Ensembl chr 2:182,006,242...182,013,763
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha IEP RGD PMID:15161688 RGD:9068912 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052
JBrowse link
G Hp haptoglobin IEP RGD PMID:12379430 RGD:1626377 NCBI chr19:42,096,255...42,100,805
Ensembl chr19:42,097,995...42,100,804
JBrowse link
G Il7 interleukin 7 IEP RGD PMID:15799696 RGD:10402940 NCBI chr 2:96,427,884...96,474,979
Ensembl chr 2:96,439,286...96,474,977
JBrowse link
G Kars lysyl-tRNA synthetase IDA RGD PMID:4001316 RGD:12910553 NCBI chr19:44,212,205...44,231,209
Ensembl chr19:44,212,206...44,231,157
JBrowse link
G Lig4 DNA ligase 4 ISO (PMID:9809069) RGD PMID:9809069 NCBI chr16:85,331,771...85,339,496
Ensembl chr16:85,331,866...85,337,769
JBrowse link
G Lrp2 LDL receptor related protein 2 IDA RGD PMID:12121845 RGD:1641839 NCBI chr 3:55,665,153...55,822,484
Ensembl chr 3:55,665,145...55,822,551
JBrowse link
G Msh2 mutS homolog 2 ISO
IEA
(MGI:MGI:2667543|PMID:12687013)
GO_REF:0000107
RGD
Ensembl
PMID:12687013 GO_REF:0000107, MGI:MGI:2667543 NCBI chr 6:11,215,951...11,274,916
Ensembl chr 6:11,215,963...11,274,932
JBrowse link
G Pdxk pyridoxal kinase IEP RGD PMID:2928487 RGD:2303016 NCBI chr20:10,930,651...10,952,194
Ensembl chr20:10,930,518...10,952,391
JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1