Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:response to light stimulus
go back to main search page
Accession:GO:0009416 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light.


show annotations for term's descendants           Sort by:
 
response to light stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASNS asparagine synthetase (glutamine-hydrolyzing) ISO transpupillary thermotherapy laser RGD PMID:16885923 RGD:2302304 NCBI chr 9:77,318,341...77,336,290
Ensembl chr 9:77,318,213...77,509,020
JBrowse link
G BDNF brain derived neurotrophic factor ISO RGD PMID:17640634 RGD:8655603 NCBI chr 2:32,623,668...32,679,293
Ensembl chr 2:32,623,268...32,679,164
JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 ISO (PMID:15038852) RGD
BHF-UCL
PMID:12397359, PMID:15038852 RGD:625726 NCBI chr13:61,526,121...61,533,686
Ensembl chr13:61,526,197...61,533,686
JBrowse link
G CLOCK clock circadian regulator ISO RGD PMID:10471199 RGD:10401879 NCBI chr 8:54,793,323...54,910,192
Ensembl chr 8:54,788,864...54,910,146
JBrowse link
G CLU clusterin ISO RGD PMID:11803476 RGD:9062370 NCBI chr14:11,336,585...11,352,569
Ensembl chr14:11,336,590...11,352,475
JBrowse link
G CRY1 cryptochrome circadian regulator 1 ISO (MGI:6294193|PMID:29561690) UniProt PMID:29561690 MGI:6294193 NCBI chr 5:13,275,265...13,429,566
Ensembl chr 5:13,275,544...13,364,594
JBrowse link
G CRY2 cryptochrome circadian regulator 2 ISO (PMID:15751956)
(MGI:6294193|PMID:29561690)
CAFA
UniProt
PMID:15751956, PMID:29561690 MGI:6294193 NCBI chr 2:16,587,101...16,620,380
Ensembl chr 2:16,585,966...16,620,405
JBrowse link
G DNM2 dynamin 2 ISO RGD PMID:22666495 RGD:9685159 NCBI chr 2:69,474,011...69,574,427
Ensembl chr 2:69,474,031...69,574,424
JBrowse link
G DRD2 dopamine receptor D2 ISO (MGI:3639799|PMID:16715079) MGI PMID:16715079 MGI:3639799 NCBI chr 9:41,068,618...41,135,262
Ensembl chr 9:41,068,779...41,133,599
JBrowse link
G DUSP1 dual specificity phosphatase 1 ISO RGD PMID:15527789 RGD:2298681 NCBI chr16:51,457,924...51,461,095
Ensembl chr16:51,458,020...51,461,086
JBrowse link
G DYNLRB1 dynein light chain roadblock-type 1 ISO RGD PMID:10816553 RGD:633064 NCBI chr17:37,923,451...37,941,851
Ensembl chr17:37,923,475...37,945,880
JBrowse link
G ELK1 ETS transcription factor ELK1 ISO RGD PMID:10383826 RGD:7488912 NCBI chr  X:42,157,980...42,174,964
Ensembl chr  X:42,143,805...42,174,939
JBrowse link
G FECH ferrochelatase ISO (MGI:50545|PMID:1939658) MGI PMID:1939658 MGI:50545 NCBI chr 1:106,861,628...106,898,407
Ensembl chr 1:106,854,002...106,898,418
JBrowse link
G FMR1 FMRP translational regulator 1 ISO RGD PMID:15564573 RGD:1601175 NCBI chr  X:120,361,232...120,400,282
Ensembl chr  X:120,361,229...120,399,835
JBrowse link
G FOS Fos proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:11146118 RGD:2293791 NCBI chr 7:98,449,508...98,451,971
Ensembl chr 7:98,449,349...98,455,554
JBrowse link
G FOSL2 FOS like 2, AP-1 transcription factor subunit ISO RGD PMID:11146118 RGD:2293791 NCBI chr 3:110,820,403...110,842,903
Ensembl chr 3:110,823,666...110,843,068
JBrowse link
G GJA10 gap junction protein alpha 10 ISO (MGI:3654563|PMID:16820008) MGI PMID:16820008 MGI:3654563 NCBI chr 1:57,879,740...57,881,395
Ensembl chr 1:57,879,740...57,892,734
JBrowse link
G GNAT1 G protein subunit alpha transducin 1 ISS AgBase GO_REF:0000024 NCBI chr13:32,671,377...32,678,394
Ensembl chr13:32,671,432...32,678,394
JBrowse link
G GRIN2A glutamate ionotropic receptor NMDA type subunit 2A ISO RGD PMID:19850826 RGD:2325946 NCBI chr 3:32,749,329...33,149,350
Ensembl chr 3:32,752,351...33,143,499
JBrowse link
G GRK1 G protein-coupled receptor kinase 1 ISO (MGI:1334014|PMID:10097103) RGD
MGI
PMID:3950623, PMID:10097103 MGI:1334014, RGD:1600007 NCBI chr11:78,793,670...78,803,291
Ensembl chr11:78,793,777...78,803,297
JBrowse link
G JUNB JunB proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:11146118 RGD:2293791 NCBI chr 2:66,214,086...66,219,435
Ensembl chr 2:66,214,594...66,215,637
JBrowse link
G JUND JunD proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:11146118 RGD:2293791 NCBI chr 2:59,530,991...59,532,846 JBrowse link
G KMT2A lysine methyltransferase 2A ISO (MGI:5638946|PMID:25834037) MGI PMID:25834037 MGI:5638946 NCBI chr 9:45,743,566...45,828,559 JBrowse link
G LOC100518330 serotonin N-acetyltransferase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:5,042,897...5,047,626
Ensembl chr12:5,037,172...5,055,486
JBrowse link
G MAPK10 mitogen-activated protein kinase 10 ISO (MGI:5431019|PMID:22441692) UniProt PMID:22441692 MGI:5431019 NCBI chr 8:132,445,818...132,751,575
Ensembl chr 8:132,249,635...132,776,820
JBrowse link
G MAT2A methionine adenosyltransferase 2A ISO RGD PMID:15504733 RGD:1598692 NCBI chr 3:59,220,203...59,225,097
Ensembl chr 3:59,211,157...59,225,261
JBrowse link
G NTRK2 neurotrophic receptor tyrosine kinase 2 ISO RGD PMID:17640634 RGD:8655603 NCBI chr10:30,030,050...30,429,938
Ensembl chr10:30,033,379...30,429,882
JBrowse link
G OGG1 8-oxoguanine DNA glycosylase ISO RGD PMID:15979612 RGD:8694099 NCBI chr13:66,038,669...66,045,478 JBrowse link
G OPN4 opsin 4 NOT ISO (MGI:5925970|PMID:26320947) MGI PMID:26320947 MGI:5925970 NCBI chr14:87,645,563...87,660,820
Ensembl chr14:87,644,240...87,722,245
JBrowse link
G PER1 period circadian regulator 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:53,361,863...53,376,723
Ensembl chr12:53,361,868...53,376,611
JBrowse link
G PER2 period circadian regulator 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:137,793,419...137,837,854
Ensembl chr15:137,793,419...137,837,236
JBrowse link
G PER3 period circadian regulator 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:68,487,634...68,548,718 JBrowse link
G POLG DNA polymerase gamma, catalytic subunit ISO RGD PMID:15979612 RGD:8694099 NCBI chr 7:54,889,150...54,907,167
Ensembl chr 7:54,889,153...54,906,856
JBrowse link
G PPARG peroxisome proliferator activated receptor gamma ISO (MGI:3830801|PMID:19041764) UniProt PMID:19041764 MGI:3830801 NCBI chr13:68,301,566...68,433,951
Ensembl chr13:68,302,655...68,433,947
JBrowse link
G RHO rhodopsin ISO (MGI:3655007|PMID:16723493) MGI PMID:16723493 MGI:3655007 NCBI chr13:68,908,578...68,913,651
Ensembl chr13:68,908,578...68,913,651
JBrowse link
G RIC8A RIC8 guanine nucleotide exchange factor A ISO (MGI:3692154|PMID:16221497) MGI PMID:16221497 MGI:3692154 NCBI chr 2:32,135...37,682
Ensembl chr 2:32,215...39,360
JBrowse link
G RPE65 retinoid isomerohydrolase RPE65 ISO RGD PMID:17389522 RGD:9585654 NCBI chr 6:144,206,078...144,229,471
Ensembl chr 6:144,206,077...144,293,709
JBrowse link
G SLC1A2 solute carrier family 1 member 2 ISO (MGI:1203466|PMID:9539795) MGI PMID:9539795 MGI:1203466 NCBI chr 2:25,603,892...25,771,840
Ensembl chr 2:25,604,950...25,848,276
JBrowse link
G SLC1A3 solute carrier family 1 member 3 IEA Ensembl GO_REF:0000107 NCBI chr16:21,873,691...21,965,315
Ensembl chr16:21,873,691...21,968,671
JBrowse link
G SLC4A10 solute carrier family 4 member 10 IEA Ensembl GO_REF:0000107 NCBI chr15:68,342,607...68,655,009
Ensembl chr15:68,224,395...68,656,318
JBrowse link
G SYNE1 spectrin repeat containing nuclear envelope protein 1 ISO RGD PMID:8700883 RGD:632616 NCBI chr 1:13,715,644...14,201,711 JBrowse link
G TH tyrosine hydroxylase ISO RGD PMID:21185915 RGD:5128767 NCBI chr 2:1,499,628...1,506,180
Ensembl chr 2:1,499,618...1,506,615
JBrowse link
absorption of visible light term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RHO rhodopsin ISS AgBase GO_REF:0000024 NCBI chr13:68,908,578...68,913,651
Ensembl chr13:68,908,578...68,913,651
JBrowse link
adaptation of rhodopsin mediated signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RDH11 retinol dehydrogenase 11 IEA Ensembl GO_REF:0000107 NCBI chr 7:91,415,041...91,452,530 JBrowse link
G RS1 retinoschisin 1 ISO (MGI:3055638|PMID:15326152) MGI PMID:15326152 MGI:3055638 NCBI chr  X:15,080,972...15,099,426
Ensembl chr  X:15,084,043...15,108,937
JBrowse link
cellular response to high light intensity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKT2 AKT serine/threonine kinase 2 IEA Ensembl GO_REF:0000107 NCBI chr 6:48,555,785...48,620,472
Ensembl chr 6:48,555,789...48,587,919
JBrowse link
cellular response to light stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRB1 crumbs cell polarity complex component 1 ISO (MGI:3696487|PMID:17234588) MGI PMID:17234588 MGI:3696487 NCBI chr10:20,137,246...20,332,539
Ensembl chr10:20,137,451...20,332,414
JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha ISO RGD PMID:17475674 RGD:9068879 NCBI chr 1:190,625,436...190,673,926
Ensembl chr 1:190,625,181...190,674,850
JBrowse link
G KCNE1 potassium voltage-gated channel subfamily E regulatory subunit 1 ISO RGD PMID:24202060 RGD:12910722 NCBI chr13:198,051,281...198,059,444 JBrowse link
G LOC494564 medium-wave-sensitive opsin IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:124,816,014...124,828,225 JBrowse link
G OPN1SW opsin 1, short wave sensitive IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:19,836,453...19,839,425
Ensembl chr18:19,836,453...19,839,425
JBrowse link
G OPN4 opsin 4 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:87,645,563...87,660,820
Ensembl chr14:87,644,240...87,722,245
JBrowse link
G OPN5 opsin 5 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:42,476,125...42,507,181
Ensembl chr 7:42,476,125...42,527,121
JBrowse link
G RGR retinal G protein coupled receptor IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:85,485,210...85,496,393
Ensembl chr14:85,485,170...85,496,382
JBrowse link
G RHO rhodopsin IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:68,908,578...68,913,651
Ensembl chr13:68,908,578...68,913,651
JBrowse link
G RP1 RP1 axonemal microtubule associated IEA Ensembl GO_REF:0000107 NCBI chr 4:76,724,604...76,730,264
Ensembl chr 4:76,724,604...76,734,610
JBrowse link
G RPGR retinitis pigmentosa GTPase regulator ISO (MGI:1354839|PMID:10725384) MGI PMID:10725384 MGI:1354839 NCBI chr  X:34,238,961...34,522,814 JBrowse link
G RRH retinal pigment epithelium-derived rhodopsin homolog IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:112,382,208...112,399,622
Ensembl chr 8:112,382,780...112,399,043
JBrowse link
G TRPM1 transient receptor potential cation channel subfamily M member 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:143,718,295...143,856,968
Ensembl chr 1:143,709,864...143,855,984
JBrowse link
G TRPM3 transient receptor potential cation channel subfamily M member 3 IEA InterPro GO_REF:0000002 NCBI chr 1:223,833,263...224,682,424
Ensembl chr 1:223,836,213...224,680,190
JBrowse link
cellular response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AQP1 aquaporin 1 (Colton blood group) ISS UniProt GO_REF:0000024 NCBI chr18:42,063,482...42,076,741 JBrowse link
G ATR ATR serine/threonine kinase IEA Ensembl GO_REF:0000107 NCBI chr13:83,175,515...83,289,986
Ensembl chr13:83,174,824...83,289,923
JBrowse link
G AURKB aurora kinase B ISS
IEA
UniProt
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr12:53,410,833...53,426,165
Ensembl chr12:53,410,176...53,423,225
JBrowse link
G BAK1 BCL2 antagonist/killer 1 ISO (PMID:15901672)
(MGI:3689797|PMID:15901672)
UniProtKB
UniProt
PMID:15901672 MGI:3689797 NCBI chr 7:29,808,849...29,815,345 JBrowse link
G BAX BCL2 associated X, apoptosis regulator ISO (MGI:3042308|PMID:14963330) MGI PMID:14963330 MGI:3042308 NCBI chr 6:54,222,341...54,228,150
Ensembl chr 6:54,187,260...54,228,144
JBrowse link
G BMF Bcl2 modifying factor IEA Ensembl GO_REF:0000107 NCBI chr 1:131,178,021...131,199,668
Ensembl chr 1:131,178,295...131,200,393
JBrowse link
G CASP9 caspase 9 IEA Ensembl GO_REF:0000107 NCBI chr 6:74,707,597...74,730,033
Ensembl chr 6:74,706,515...74,730,092
JBrowse link
G CDC25A cell division cycle 25A IEA Ensembl GO_REF:0000107
G COPS9 COP9 signalosome subunit 9 ISO (PMID:26456823) UniProtKB PMID:26456823 NCBI chr15:139,260,471...139,264,252 JBrowse link
G CREBBP CREB binding protein IEA Ensembl GO_REF:0000107 NCBI chr 3:38,388,366...38,530,243
Ensembl chr 3:38,388,547...38,530,230
JBrowse link
G DDIAS DNA damage induced apoptosis suppressor ISO (MGI:3718924|PMID:17515607) MGI PMID:17515607 MGI:3718924 NCBI chr 9:17,077,884...17,097,597
Ensembl chr 9:17,077,884...17,097,597
JBrowse link
G DHX36 DEAH-box helicase 36 IEA Ensembl GO_REF:0000107 NCBI chr13:94,298,790...94,350,333
Ensembl chr13:94,298,790...94,350,312
JBrowse link
G EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 ISO (MGI:5700311|PMID:12176355) UniProt PMID:12176355 MGI:5700311 NCBI chr 1:131,244,818...131,355,240
Ensembl chr 1:131,245,463...131,355,224
JBrowse link
G EIF2S1 eukaryotic translation initiation factor 2 subunit alpha IEA
ISS
Ensembl
UniProt
GO_REF:0000024, GO_REF:0000107 NCBI chr 7:91,085,025...91,109,835
Ensembl chr 7:91,085,335...91,109,829
JBrowse link
G EP300 E1A binding protein p300 IEA Ensembl GO_REF:0000107 NCBI chr 5:7,311,165...7,394,515
Ensembl chr 5:7,311,171...7,393,760
JBrowse link
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit IEA Ensembl GO_REF:0000107 NCBI chr 3:29,266,234...29,306,109
Ensembl chr 3:29,266,236...29,306,116
JBrowse link
G FBXW7 F-box and WD repeat domain containing 7 ISO (PMID:17873522) UniProtKB PMID:17873522 NCBI chr 8:76,482,027...76,699,354
Ensembl chr 8:76,482,022...76,699,351
JBrowse link
G FMR1 FMRP translational regulator 1 ISO (MGI:5602914|PMID:24813610) UniProt PMID:24813610 MGI:5602914 NCBI chr  X:120,361,232...120,400,282
Ensembl chr  X:120,361,229...120,399,835
JBrowse link
G INO80 INO80 complex ATPase subunit ISO (PMID:18026119) UniProtKB PMID:18026119 NCBI chr 1:130,201,705...130,341,627
Ensembl chr 1:130,201,718...130,342,840
JBrowse link
G KDM1A lysine demethylase 1A IEA Ensembl GO_REF:0000107 NCBI chr 6:80,903,407...80,971,875
Ensembl chr 6:80,903,496...80,971,595
JBrowse link
G MAPK13 mitogen-activated protein kinase 13 IEA Ensembl GO_REF:0000107 NCBI chr 7:31,880,643...31,889,586
Ensembl chr 7:31,880,638...31,890,385
JBrowse link
G MAPK9 mitogen-activated protein kinase 9 ISO RGD PMID:8875991 RGD:2304246 NCBI chr 2:78,338,466...78,399,108
Ensembl chr 2:78,338,369...78,399,105
JBrowse link
G METTL3 methyltransferase like 3 IEA Ensembl GO_REF:0000107 NCBI chr 7:77,661,945...77,679,459
Ensembl chr 7:77,662,058...77,695,948
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor ISO (PMID:17873522) UniProtKB PMID:17873522 NCBI chr 4:12,455,141...12,460,360
Ensembl chr 4:12,455,119...12,461,078
JBrowse link
G N4BP1 NEDD4 binding protein 1 IEA Ensembl GO_REF:0000107 NCBI chr 6:36,122,189...36,177,965
Ensembl chr 6:36,122,035...36,174,536
JBrowse link
G NEDD4 NEDD4 E3 ubiquitin protein ligase ISO (PMID:17996703) BHF-UCL PMID:17996703 NCBI chr 1:115,941,945...116,069,884
Ensembl chr 1:115,941,937...116,070,317
JBrowse link
G NFATC4 nuclear factor of activated T cells 4 IEA Ensembl GO_REF:0000107 NCBI chr 7:74,918,982...74,929,688
Ensembl chr 7:74,918,982...74,931,348
JBrowse link
G NOC2L NOC2 like nucleolar associated transcriptional repressor IEA Ensembl GO_REF:0000107 NCBI chr 6:63,307,703...63,320,799
Ensembl chr 6:63,308,187...63,340,917
JBrowse link
G NPM1 nucleophosmin 1 ISO (PMID:19160485) CAFA PMID:19160485 NCBI chr16:52,767,263...52,781,862
Ensembl chr16:52,765,296...52,781,740
JBrowse link
G NSMCE3 NSE3 homolog, SMC5-SMC6 complex component ISO (PMID:27427983) UniProtKB PMID:27427983 NCBI chr 1:144,469,617...144,474,026 JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 IEA Ensembl GO_REF:0000107 NCBI chr10:14,203,157...14,241,164
Ensembl chr10:14,203,159...14,241,197
JBrowse link
G PBK PDZ binding kinase IEA Ensembl GO_REF:0000107 NCBI chr14:11,543,657...11,577,286
Ensembl chr14:11,543,599...11,566,702
JBrowse link
G PCNA proliferating cell nuclear antigen IEA Ensembl GO_REF:0000107 NCBI chr17:14,137,746...14,142,584
Ensembl chr17:14,125,814...14,185,276
JBrowse link
G PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 IEA Ensembl GO_REF:0000107 NCBI chr16:46,434,757...46,523,626
Ensembl chr16:46,434,873...46,523,609
JBrowse link
G POLD1 DNA polymerase delta 1, catalytic subunit ISO (PMID:24939902) UniProtKB PMID:24939902 NCBI chr 6:55,247,799...55,272,087
Ensembl chr 6:55,247,861...55,272,166
JBrowse link
G POLK DNA polymerase kappa IEA Ensembl GO_REF:0000107 NCBI chr 2:84,555,648...84,619,490
Ensembl chr 2:84,538,050...84,656,234
JBrowse link
G PPP1R15A protein phosphatase 1 regulatory subunit 15A ISO RGD PMID:9811446 RGD:9999409 NCBI chr 6:54,172,038...54,175,461
Ensembl chr 6:54,172,050...54,175,465
JBrowse link
G PTGS2 prostaglandin-endoperoxide synthase 2 ISO RGD PMID:22306367 RGD:5688265 NCBI chr 9:127,850,164...127,858,866
Ensembl chr 9:127,850,013...127,858,884
JBrowse link
G PTN pleiotrophin ISO RGD PMID:17925408 RGD:10044023 NCBI chr18:12,219,708...12,309,045
Ensembl chr18:12,219,790...12,311,922
JBrowse link
G PTPRK protein tyrosine phosphatase receptor type K IEA Ensembl GO_REF:0000107 NCBI chr 1:34,693,363...35,258,699
Ensembl chr 1:34,693,367...35,258,701
JBrowse link
G RHBDD1 rhomboid domain containing 1 IEA Ensembl GO_REF:0000107 NCBI chr15:128,346,315...128,499,151
Ensembl chr15:128,346,373...128,469,213
JBrowse link
G RHNO1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 IEA Ensembl GO_REF:0000107 NCBI chr 5:67,239,907...67,246,150
Ensembl chr 5:67,239,200...67,246,124
JBrowse link
G RNF168 ring finger protein 168 ISO (MGI:5562615|PMID:24217620) MGI PMID:24217620 MGI:5562615 NCBI chr13:133,625,534...133,659,253 JBrowse link
G RPL26 ribosomal protein L26 ISO (PMID:16213212) CAFA PMID:16213212 NCBI chr12:53,548,313...53,553,453
Ensembl chr12:53,548,321...53,553,451
JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 IEA Ensembl GO_REF:0000107 NCBI chr 6:54,250,494...54,263,492
Ensembl chr 6:54,250,515...54,266,893
JBrowse link
G SDE2 SDE2 telomere maintenance homolog IEA Ensembl GO_REF:0000107 NCBI chr10:13,879,482...13,897,847
Ensembl chr10:13,879,728...13,897,862
JBrowse link
G TAF1 TATA-box binding protein associated factor 1 ISO (PMID:24289924) ParkinsonsUK-UCL PMID:24289924 NCBI chr  X:57,382,211...57,466,700 JBrowse link
G TMEM161A transmembrane protein 161A IEA Ensembl GO_REF:0000107 NCBI chr 2:58,728,738...58,744,939
Ensembl chr 2:58,728,813...58,744,937
JBrowse link
G TP53 tumor protein p53 ISO (PMID:16213212), (PMID:23629966)
(MGI:5490676|PMID:23629966)
(MGI:3042308|PMID:14963330)
CAFA
MGI
PMID:14963330, PMID:16213212, PMID:23629966 MGI:3042308, MGI:5490676 NCBI chr12:52,939,643...52,953,786
Ensembl chr12:52,939,643...52,953,819
JBrowse link
G TP53INP1 tumor protein p53 inducible nuclear protein 1 IEA Ensembl GO_REF:0000107 NCBI chr 4:41,747,654...41,766,688
Ensembl chr 4:41,747,726...41,766,684
JBrowse link
G TREX1 three prime repair exonuclease 1 ISO (MGI:5014018|PMID:20511593) MGI PMID:20511593 MGI:5014018 NCBI chr13:31,177,604...31,180,764
Ensembl chr13:31,178,601...31,180,592
JBrowse link
G TRIAP1 TP53 regulated inhibitor of apoptosis 1 ISO (PMID:15735003) BHF-UCL PMID:15735003 NCBI chr14:40,411,957...40,415,500 JBrowse link
G USP28 ubiquitin specific peptidase 28 IEA Ensembl GO_REF:0000107 NCBI chr 9:41,417,560...41,481,044
Ensembl chr 9:41,417,559...41,480,985
JBrowse link
G USP47 ubiquitin specific peptidase 47 IEA Ensembl GO_REF:0000107 NCBI chr 2:47,449,162...47,583,893
Ensembl chr 2:47,448,122...47,582,814
JBrowse link
G YY1 YY1 transcription factor IEA Ensembl GO_REF:0000107 NCBI chr 7:121,132,168...121,170,699
Ensembl chr 7:121,131,917...121,170,697
JBrowse link
G ZBTB1 zinc finger and BTB domain containing 1 IEA Ensembl GO_REF:0000107 NCBI chr 7:88,575,563...88,602,726
Ensembl chr 7:88,576,008...88,610,480
JBrowse link
cellular response to UV-A term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CERS1 ceramide synthase 1 ISO (PMID:19800881) UniProtKB PMID:19800881 NCBI chr 2:58,951,463...58,972,692 JBrowse link
G MME membrane metalloendopeptidase IEA Ensembl GO_REF:0000107 NCBI chr13:95,018,395...95,122,977
Ensembl chr13:95,019,081...95,126,045
JBrowse link
G MMP1 matrix metallopeptidase 1 ISS UniProt GO_REF:0000024 NCBI chr 9:33,411,738...33,420,205
Ensembl chr 9:33,411,065...33,454,000
JBrowse link
G MMP2 matrix metallopeptidase 2 IEA Ensembl GO_REF:0000107 NCBI chr 6:30,059,247...30,087,031
Ensembl chr 6:30,058,594...30,086,982
JBrowse link
G MMP3 matrix metallopeptidase 3 IEA Ensembl GO_REF:0000107 NCBI chr 9:33,446,969...33,453,995
Ensembl chr 9:33,411,065...33,454,000
JBrowse link
G MMP9 matrix metallopeptidase 9 IEA Ensembl GO_REF:0000107 NCBI chr17:48,179,690...48,186,782
Ensembl chr17:48,175,056...48,188,264
JBrowse link
G OPN1SW opsin 1, short wave sensitive IEA Ensembl GO_REF:0000107 NCBI chr18:19,836,453...19,839,425
Ensembl chr18:19,836,453...19,839,425
JBrowse link
G OPN5 opsin 5 IEA Ensembl GO_REF:0000107 NCBI chr 7:42,476,125...42,507,181
Ensembl chr 7:42,476,125...42,527,121
JBrowse link
G PPID peptidylprolyl isomerase D IEA Ensembl GO_REF:0000107 NCBI chr 8:47,656,269...47,702,805
Ensembl chr 8:47,656,273...47,702,748
JBrowse link
G TIMP1 TIMP metallopeptidase inhibitor 1 IEA
ISS
Ensembl
UniProt
GO_REF:0000024, GO_REF:0000107 NCBI chr  X:42,103,251...42,106,289
Ensembl chr  X:42,102,172...42,106,297
JBrowse link
cellular response to UV-B term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDKN1A cyclin dependent kinase inhibitor 1A IEA Ensembl GO_REF:0000107 NCBI chr 7:32,354,776...32,363,771
Ensembl chr 7:32,359,455...32,363,761
JBrowse link
G HYAL1 hyaluronidase 1 ISS
IEA
UniProt
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr13:32,798,135...32,800,705
Ensembl chr13:32,793,569...32,800,796
JBrowse link
G HYAL2 hyaluronidase 2 ISS
IEA
UniProt
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr13:32,805,220...32,813,684
Ensembl chr13:32,805,223...32,815,335
JBrowse link
G HYAL3 hyaluronidase 3 IEA Ensembl GO_REF:0000107 NCBI chr13:32,790,843...32,796,995
Ensembl chr13:32,789,421...32,796,563
JBrowse link
G LOC110258364 cysteine-rich protein 1 ISO (PMID:20415737) UniProtKB PMID:20415737
G MFAP4 microfibril associated protein 4 IEA Ensembl GO_REF:0000107 NCBI chr12:60,141,488...60,144,214
Ensembl chr12:60,137,566...60,144,201
JBrowse link
G MME membrane metalloendopeptidase IEA Ensembl GO_REF:0000107 NCBI chr13:95,018,395...95,122,977
Ensembl chr13:95,019,081...95,126,045
JBrowse link
G RPL13A ribosomal protein L13a ISO RGD PMID:10483362 RGD:11036101 NCBI chr 6:54,551,772...54,568,752 JBrowse link
G RPL35 ribosomal protein L35 ISO RGD PMID:10483362 RGD:11036101 NCBI chr 1:265,637,266...265,642,278
Ensembl chr 1:265,636,637...265,645,348
JBrowse link
G STK11 serine/threonine kinase 11 IEA Ensembl GO_REF:0000107 NCBI chr 2:77,229,888...77,249,322
Ensembl chr 2:77,230,372...77,249,327
JBrowse link
cellular response to UV-C term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1H9orf116 chromosome 1 C9orf116 homolog IEA Ensembl GO_REF:0000107
G EI24 EI24 autophagy associated transmembrane protein ISO (MGI:5543725|PMID:24014029) MGI PMID:24014029 MGI:5543725 NCBI chr 9:52,704,560...52,724,966
Ensembl chr 9:52,704,597...52,752,996
JBrowse link
G IMPACT impact RWD domain protein ISO (MGI:5576818|PMID:24333428) UniProt PMID:24333428 MGI:5576818 NCBI chr 6:109,235,590...109,272,801
Ensembl chr 6:109,235,585...109,319,482
JBrowse link
G MDM2 MDM2 proto-oncogene ISO RGD PMID:14558917 RGD:2317408 NCBI chr 5:33,105,717...33,137,602
Ensembl chr 5:33,086,994...33,178,089
JBrowse link
G POLH DNA polymerase eta IEA Ensembl GO_REF:0000107 NCBI chr 7:38,569,211...38,601,794
Ensembl chr 7:38,567,775...38,601,790
JBrowse link
G POLI DNA polymerase iota ISO (MGI:3695544|PMID:17114294) MGI PMID:17114294 MGI:3695544 NCBI chr 1:103,793,779...103,820,365
Ensembl chr 1:103,794,071...103,824,646
JBrowse link
G TP53 tumor protein p53 IEA Ensembl GO_REF:0000107 NCBI chr12:52,939,643...52,953,786
Ensembl chr12:52,939,643...52,953,819
JBrowse link
dark adaptation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TENT2 terminal nucleotidyltransferase 2 ISO RGD PMID:23700402 RGD:11041783 NCBI chr 2:88,328,250...88,388,242
Ensembl chr 2:88,254,320...88,502,342
JBrowse link
detection of light stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDE6B phosphodiesterase 6B IEA Ensembl GO_REF:0000107 NCBI chr 8:80,378...111,960
Ensembl chr 8:80,378...110,369
JBrowse link
G RHO rhodopsin ISO (MGI:2155023|PMID:11747369) MGI PMID:11747369 MGI:2155023 NCBI chr13:68,908,578...68,913,651
Ensembl chr13:68,908,578...68,913,651
JBrowse link
detection of light stimulus involved in visual perception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BEST1 bestrophin 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:9,538,082...9,550,975
Ensembl chr 2:9,538,084...9,553,247
JBrowse link
G CACNA1F calcium voltage-gated channel subunit alpha1 F IEA Ensembl GO_REF:0000107 NCBI chr  X:43,250,449...43,284,458
Ensembl chr  X:43,246,786...43,283,990
JBrowse link
G CACNA2D4 calcium voltage-gated channel auxiliary subunit alpha2delta 4 IEA Ensembl GO_REF:0000107 NCBI chr 5:68,805,092...68,899,397
Ensembl chr 5:68,808,712...68,906,249
JBrowse link
G CACNB4 calcium voltage-gated channel auxiliary subunit beta 4 IEA Ensembl GO_REF:0000107 NCBI chr15:402,801...455,691
Ensembl chr15:186,315...459,856
JBrowse link
G CCDC66 coiled-coil domain containing 66 IEA Ensembl GO_REF:0000107 NCBI chr13:38,438,669...38,493,212
Ensembl chr13:38,438,701...38,492,439
JBrowse link
G CEP250 centrosomal protein 250 ISO (MGI:6317055|PMID:30998843) UniProt PMID:30998843 MGI:6317055 NCBI chr17:38,809,724...38,872,796
Ensembl chr17:38,810,522...38,867,218
JBrowse link
G CNGB1 cyclic nucleotide gated channel subunit beta 1 ISO (PMID:15557452) UniProtKB PMID:15557452 NCBI chr 6:19,752,734...19,865,830 JBrowse link
G CRB1 crumbs cell polarity complex component 1 ISO (MGI:5315300|PMID:22447858) MGI PMID:22447858 MGI:5315300 NCBI chr10:20,137,246...20,332,539
Ensembl chr10:20,137,451...20,332,414
JBrowse link
G EYS eyes shut homolog ISO (PMID:18836446), (PMID:18976725), (PMID:20696082), (PMID:22363543) CACAO PMID:18836446, PMID:18976725, PMID:20696082, PMID:22363543 NCBI chr 1:45,306,446...46,649,722 JBrowse link
G GJA10 gap junction protein alpha 10 IEA Ensembl GO_REF:0000107 NCBI chr 1:57,879,740...57,881,395
Ensembl chr 1:57,879,740...57,892,734
JBrowse link
G GNAT1 G protein subunit alpha transducin 1 IEA Ensembl GO_REF:0000107 NCBI chr13:32,671,377...32,678,394
Ensembl chr13:32,671,432...32,678,394
JBrowse link
G GNAT2 G protein subunit alpha transducin 2 IEA Ensembl GO_REF:0000107 NCBI chr 4:110,512,349...110,523,222
Ensembl chr 4:110,513,213...110,523,071
JBrowse link
G GRM6 glutamate metabotropic receptor 6 IEA Ensembl GO_REF:0000107 NCBI chr 2:79,466,899...79,480,562
Ensembl chr 2:79,466,978...79,479,146
JBrowse link
G GUCY2F guanylate cyclase 2F, retinal ISO (MGI:3708225|PMID:17255100) CACAO PMID:17255100 MGI:3708225 NCBI chr  X:89,557,952...89,653,491 JBrowse link
G LOC100523747 phospholipid-transporting ATPase IB IEA Ensembl GO_REF:0000107 NCBI chr11:3,277,395...3,793,881
Ensembl chr11:3,278,071...3,793,881
JBrowse link
G PRPH2 peripherin 2 IEA Ensembl GO_REF:0000107 NCBI chr 7:37,788,547...37,805,142
Ensembl chr 7:37,790,178...37,805,142
JBrowse link
G RBP4 retinol binding protein 4 ISO (MGI:3687059|PMID:12484775) MGI PMID:12484775 MGI:3687059 NCBI chr14:105,037,360...105,044,552
Ensembl chr14:105,036,770...105,044,765
JBrowse link
G REEP6 receptor accessory protein 6 ISO (PMID:27889058) UniProtKB PMID:27889058 NCBI chr 2:76,983,431...76,989,017 JBrowse link
G RGS9BP regulator of G protein signaling 9 binding protein IEA Ensembl GO_REF:0000107 NCBI chr 6:42,560,059...42,563,179
Ensembl chr 6:42,560,968...42,561,681
JBrowse link
G ROM1 retinal outer segment membrane protein 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:9,125,377...9,127,615
Ensembl chr 2:9,125,381...9,127,617
JBrowse link
G RPE65 retinoid isomerohydrolase RPE65 IEA Ensembl GO_REF:0000107 NCBI chr 6:144,206,078...144,229,471
Ensembl chr 6:144,206,077...144,293,709
JBrowse link
G RPGRIP1 RPGR interacting protein 1 ISO (PMID:21521437) CACAO PMID:21521437 NCBI chr 7:77,813,964...77,903,973
Ensembl chr 7:77,814,708...77,903,928
JBrowse link
G SEMA5A semaphorin 5A ISO (MGI:5140622|PMID:21835343) MGI PMID:21835343 MGI:5140622 NCBI chr16:72,796,453...73,335,974
Ensembl chr16:72,492,516...73,329,010
JBrowse link
G SEMA5B semaphorin 5B IEA Ensembl GO_REF:0000107 NCBI chr13:137,443,982...137,586,962
Ensembl chr13:137,455,343...137,590,841
JBrowse link
G TULP1 TUB like protein 1 IEA Ensembl GO_REF:0000107 NCBI chr 7:31,362,670...31,379,948
Ensembl chr 7:31,362,512...31,379,114
JBrowse link
detection of UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FECH ferrochelatase ISO (MGI:2384247|PMID:12149233) MGI PMID:12149233 MGI:2384247 NCBI chr 1:106,861,628...106,898,407
Ensembl chr 1:106,854,002...106,898,418
JBrowse link
detection of visible light term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IRX6 iroquois homeobox 6 ISO (MGI:5447580|PMID:23172916) MGI PMID:23172916 MGI:5447580 NCBI chr 6:30,198,948...30,204,587
Ensembl chr 6:30,198,943...30,205,535
JBrowse link
G LOC494564 medium-wave-sensitive opsin IEA GOC GO_REF:0000108 NCBI chr  X:124,816,014...124,828,225 JBrowse link
G OPN1SW opsin 1, short wave sensitive IEA GOC GO_REF:0000108 NCBI chr18:19,836,453...19,839,425
Ensembl chr18:19,836,453...19,839,425
JBrowse link
G OPN4 opsin 4 IEA GOC GO_REF:0000108 NCBI chr14:87,645,563...87,660,820
Ensembl chr14:87,644,240...87,722,245
JBrowse link
G OPN5 opsin 5 IEA GOC GO_REF:0000108 NCBI chr 7:42,476,125...42,507,181
Ensembl chr 7:42,476,125...42,527,121
JBrowse link
G RGR retinal G protein coupled receptor IEA GOC GO_REF:0000108 NCBI chr14:85,485,210...85,496,393
Ensembl chr14:85,485,170...85,496,382
JBrowse link
G RRH retinal pigment epithelium-derived rhodopsin homolog IEA GOC GO_REF:0000108 NCBI chr 8:112,382,208...112,399,622
Ensembl chr 8:112,382,780...112,399,043
JBrowse link
DNA synthesis involved in UV-damage excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POLA1 DNA polymerase alpha 1, catalytic subunit NOT ISO (PMID:1730053) UniProtKB PMID:1730053 NCBI chr  X:20,756,674...21,064,265
Ensembl chr  X:20,756,201...21,102,061
JBrowse link
G POLD3 DNA polymerase delta 3, accessory subunit IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:8,906,491...8,956,845
Ensembl chr 9:8,906,459...8,958,323
JBrowse link
G TREX1 three prime repair exonuclease 1 IEA Ensembl GO_REF:0000107 NCBI chr13:31,177,604...31,180,764
Ensembl chr13:31,178,601...31,180,592
JBrowse link
entrainment of circadian clock by photoperiod term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATOH7 atonal bHLH transcription factor 7 ISO (MGI:5699646|PMID:26392540) UniProt PMID:26392540 MGI:5699646 NCBI chr14:71,398,939...71,402,479
Ensembl chr14:71,400,980...71,401,447
JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 IEA Ensembl GO_REF:0000107 NCBI chr13:61,526,121...61,533,686
Ensembl chr13:61,526,197...61,533,686
JBrowse link
G CRTC1 CREB regulated transcription coactivator 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:59,069,334...59,157,196
Ensembl chr 2:59,069,334...59,157,187
JBrowse link
G CRY1 cryptochrome circadian regulator 1 IEA Ensembl GO_REF:0000107 NCBI chr 5:13,275,265...13,429,566
Ensembl chr 5:13,275,544...13,364,594
JBrowse link
G CRY2 cryptochrome circadian regulator 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:16,587,101...16,620,380
Ensembl chr 2:16,585,966...16,620,405
JBrowse link
G FBXL12 F-box and leucine rich repeat protein 12 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:68,692,994...68,701,917
Ensembl chr 2:68,692,994...68,706,144
JBrowse link
G FBXL17 F-box and leucine rich repeat protein 17 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:112,989,134...113,480,564
Ensembl chr 2:112,989,145...113,480,210
JBrowse link
G FBXL21P F-box and leucine rich repeat protein 21, pseudogene IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:138,097,009...138,108,284 JBrowse link
G FBXL22 F-box and leucine rich repeat protein 22 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:108,408,227...108,411,937 JBrowse link
G FBXL3 F-box and leucine rich repeat protein 3 IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr11:49,131,663...49,151,380
Ensembl chr11:49,130,182...49,151,009
JBrowse link
G FBXL6 F-box and leucine rich repeat protein 6 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:424,433...427,799
Ensembl chr 4:423,407...427,801
JBrowse link
G FBXL8 F-box and leucine rich repeat protein 8 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:27,803,581...27,813,404 JBrowse link
G ID2 inhibitor of DNA binding 2 ISS UniProt GO_REF:0000024 NCBI chr 3:127,500,759...127,503,207
Ensembl chr 3:127,500,759...127,503,257
JBrowse link
G MTA1 metastasis associated 1 ISO (MGI:5582861|PMID:24089055) UniProt PMID:24089055 MGI:5582861
G NR2F6 nuclear receptor subfamily 2 group F member 6 IEA Ensembl GO_REF:0000107 NCBI chr 2:60,426,116...60,438,178
Ensembl chr 2:60,426,618...60,438,177
JBrowse link
G OPN4 opsin 4 ISO (MGI:5925970|PMID:26320947) MGI PMID:26320947 MGI:5925970 NCBI chr14:87,645,563...87,660,820
Ensembl chr14:87,644,240...87,722,245
JBrowse link
G OPN5 opsin 5 IEA Ensembl GO_REF:0000107 NCBI chr 7:42,476,125...42,507,181
Ensembl chr 7:42,476,125...42,527,121
JBrowse link
G PDE6B phosphodiesterase 6B IEA Ensembl GO_REF:0000107 NCBI chr 8:80,378...111,960
Ensembl chr 8:80,378...110,369
JBrowse link
G PER1 period circadian regulator 1 IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr12:53,361,863...53,376,723
Ensembl chr12:53,361,868...53,376,611
JBrowse link
G PER2 period circadian regulator 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:137,793,419...137,837,854
Ensembl chr15:137,793,419...137,837,236
JBrowse link
G PER3 period circadian regulator 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:68,487,634...68,548,718 JBrowse link
G PML PML nuclear body scaffold IEA Ensembl GO_REF:0000107 NCBI chr 7:59,405,044...59,450,155
Ensembl chr 7:59,405,048...59,450,150
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha IEA Ensembl GO_REF:0000107 NCBI chr 2:5,120,202...5,123,168
Ensembl chr 2:5,120,140...5,126,953
JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta ISS
IEA
UniProt
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr 3:110,437,681...110,474,896
Ensembl chr 3:110,437,687...110,474,891
JBrowse link
G PPP1CC protein phosphatase 1 catalytic subunit gamma IEA Ensembl GO_REF:0000107 NCBI chr14:32,071,472...32,091,267
Ensembl chr14:32,070,544...32,091,499
JBrowse link
G RBM4 RNA binding motif protein 4 ISO (MGI:3703208|PMID:17264215) UniProt PMID:17264215 MGI:3703208 NCBI chr 2:5,776,535...5,784,337
Ensembl chr 2:5,759,062...5,800,832
JBrowse link
G RBM4B RNA binding motif protein 4B ISS UniProt GO_REF:0000024 NCBI chr 2:5,745,364...5,758,177 JBrowse link
G SIK1 salt inducible kinase 1 IEA Ensembl GO_REF:0000107 NCBI chr13:206,454,695...206,465,802 JBrowse link
G TP53 tumor protein p53 ISS
IEA
UniProt
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr12:52,939,643...52,953,786
Ensembl chr12:52,939,643...52,953,819
JBrowse link
G USP2 ubiquitin specific peptidase 2 IEA Ensembl GO_REF:0000107 NCBI chr 9:46,563,469...46,590,392
Ensembl chr 9:46,563,480...46,590,265
JBrowse link
long-day photoperiodism term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGRP agouti related neuropeptide ISO RGD PMID:19490367 RGD:6480663 NCBI chr 6:28,132,614...28,135,594
Ensembl chr 6:28,132,615...28,133,743
JBrowse link
negative regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NEDD4 NEDD4 E3 ubiquitin protein ligase IEA Ensembl GO_REF:0000107 NCBI chr 1:115,941,945...116,069,884
Ensembl chr 1:115,941,937...116,070,317
JBrowse link
optokinetic behavior term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HOXA1 homeobox A1 ISO (PMID:16155570) DFLAT PMID:16155570 NCBI chr18:45,477,561...45,480,306
Ensembl chr18:45,477,548...45,480,413
JBrowse link
G OPN4 opsin 4 IEA Ensembl GO_REF:0000107 NCBI chr14:87,645,563...87,660,820
Ensembl chr14:87,644,240...87,722,245
JBrowse link
photoperiodism term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DRD4 dopamine receptor D4 ISO RGD PMID:18321474 RGD:2301031 NCBI chr 2:398,766...401,539
Ensembl chr 2:398,766...401,432
JBrowse link
G FOSL2 FOS like 2, AP-1 transcription factor subunit ISO RGD PMID:16962714 RGD:2293767 NCBI chr 3:110,820,403...110,842,903
Ensembl chr 3:110,823,666...110,843,068
JBrowse link
G LOC100518330 serotonin N-acetyltransferase ISO RGD PMID:12358739 RGD:628397 NCBI chr12:5,042,897...5,047,626
Ensembl chr12:5,037,172...5,055,486
JBrowse link
G NMU neuromedin U ISO RGD PMID:17726140 RGD:1642120 NCBI chr 8:54,952,333...54,978,577
Ensembl chr 8:54,952,339...54,978,574
JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 ISO RGD PMID:21076970 RGD:10448986 NCBI chr12:22,263,549...22,274,131
Ensembl chr12:22,263,657...22,271,643
JBrowse link
phototransduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARRB1 arrestin beta 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:9,516,944...9,597,446
Ensembl chr 9:9,513,856...9,597,959
JBrowse link
G ASIC2 acid sensing ion channel subunit 2 IEA Ensembl GO_REF:0000107 NCBI chr12:41,726,987...42,031,997
Ensembl chr12:40,891,141...42,031,991
JBrowse link
G CABP4 calcium binding protein 4 IEA Ensembl GO_REF:0000107 NCBI chr 2:5,068,535...5,079,482
Ensembl chr 2:5,068,037...5,072,188
JBrowse link
G CNGB1 cyclic nucleotide gated channel subunit beta 1 ISO (MGI:3527312|PMID:15634774) MGI PMID:15634774 MGI:3527312 NCBI chr 6:19,752,734...19,865,830 JBrowse link
G GNAT1 G protein subunit alpha transducin 1 ISO (MGI:1928441|PMID:11095744), (MGI:3609280|PMID:16249514), (MGI:3615719|PMID:15073279), (MGI:3757777|PMID:17881533), (MGI:3772638|PMID:11853756), (MGI:3778702|PMID:18367617) MGI PMID:11095744, PMID:11853756, PMID:15073279, PMID:16249514, PMID:17881533, PMID:18367617 MGI:1928441, MGI:3609280, MGI:3615719, MGI:3757777, MGI:3772638, MGI:3778702 NCBI chr13:32,671,377...32,678,394
Ensembl chr13:32,671,432...32,678,394
JBrowse link
G GNAT2 G protein subunit alpha transducin 2 IEA Ensembl GO_REF:0000107 NCBI chr 4:110,512,349...110,523,222
Ensembl chr 4:110,513,213...110,523,071
JBrowse link
G GNGT1 G protein subunit gamma transducin 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:73,403,647...73,717,746
Ensembl chr 9:73,403,739...73,719,168
JBrowse link
G GUCA1A guanylate cyclase activator 1A IEA Ensembl GO_REF:0000107 NCBI chr 7:37,282,630...37,296,713
Ensembl chr 7:37,282,700...37,296,717
JBrowse link
G GUCA1B guanylate cyclase activator 1B IEA Ensembl GO_REF:0000107 NCBI chr 7:37,297,901...37,311,158
Ensembl chr 7:37,297,905...37,310,170
JBrowse link
G LOC494564 medium-wave-sensitive opsin IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:124,816,014...124,828,225 JBrowse link
G OPN1SW opsin 1, short wave sensitive IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:19,836,453...19,839,425
Ensembl chr18:19,836,453...19,839,425
JBrowse link
G OPN4 opsin 4 IEA
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000043 NCBI chr14:87,645,563...87,660,820
Ensembl chr14:87,644,240...87,722,245
JBrowse link
G OPN5 opsin 5 IEA
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000043 NCBI chr 7:42,476,125...42,507,181
Ensembl chr 7:42,476,125...42,527,121
JBrowse link
G RCVRN recoverin IEA Ensembl GO_REF:0000107 NCBI chr12:54,740,642...54,752,291
Ensembl chr12:54,740,642...54,750,716
JBrowse link
G RGR retinal G protein coupled receptor IEA
IBA
(PMID:21873635) InterPro
GO_Central
UniProt
PMID:21873635 GO_REF:0000002, GO_REF:0000043 NCBI chr14:85,485,210...85,496,393
Ensembl chr14:85,485,170...85,496,382
JBrowse link
G RHO rhodopsin IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:68,908,578...68,913,651
Ensembl chr13:68,908,578...68,913,651
JBrowse link
G RRH retinal pigment epithelium-derived rhodopsin homolog IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:112,382,208...112,399,622
Ensembl chr 8:112,382,780...112,399,043
JBrowse link
phototransduction, UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OPN5 opsin 5 IEA Ensembl GO_REF:0000107 NCBI chr 7:42,476,125...42,507,181
Ensembl chr 7:42,476,125...42,527,121
JBrowse link
phototransduction, visible light term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AIPL1 aryl hydrocarbon receptor interacting protein like 1 IEA Ensembl GO_REF:0000107 NCBI chr12:50,903,358...50,917,187
Ensembl chr12:50,903,438...50,920,437
JBrowse link
G CHRM1 cholinergic receptor muscarinic 1 IMP (PMID:12196552) AgBase PMID:12196552 NCBI chr 2:8,858,765...8,872,042 JBrowse link
G GNA11 G protein subunit alpha 11 ISS AgBase GO_REF:0000024 NCBI chr 2:75,439,405...75,456,855
Ensembl chr 2:75,437,201...75,457,092
JBrowse link
G GNAQ G protein subunit alpha q ISS AgBase GO_REF:0000024 NCBI chr 1:230,607,469...230,906,988
Ensembl chr 1:230,605,229...230,907,675
JBrowse link
G GNAT1 G protein subunit alpha transducin 1 IEA Ensembl GO_REF:0000107 NCBI chr13:32,671,377...32,678,394
Ensembl chr13:32,671,432...32,678,394
JBrowse link
G PDE6C phosphodiesterase 6C IEA Ensembl GO_REF:0000107 NCBI chr14:105,010,974...105,122,628
Ensembl chr14:105,011,922...105,037,498
Ensembl chr14:105,011,922...105,037,498
JBrowse link
red, far-red light phototransduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RHO rhodopsin ISO RGD PMID:2525480 RGD:6893558 NCBI chr13:68,908,578...68,913,651
Ensembl chr13:68,908,578...68,913,651
JBrowse link
regulation of mRNA stability involved in cellular response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NPM1 nucleophosmin 1 ISO (PMID:12080348) UniProtKB PMID:12080348 NCBI chr16:52,767,263...52,781,862
Ensembl chr16:52,765,296...52,781,740
JBrowse link
regulation of rhodopsin mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AIPL1 aryl hydrocarbon receptor interacting protein like 1 IEA Ensembl GO_REF:0000107 NCBI chr12:50,903,358...50,917,187
Ensembl chr12:50,903,438...50,920,437
JBrowse link
G GRK1 G protein-coupled receptor kinase 1 IEA Ensembl GO_REF:0000107 NCBI chr11:78,793,670...78,803,291
Ensembl chr11:78,793,777...78,803,297
JBrowse link
regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHEK1 checkpoint kinase 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:52,759,224...52,790,878
Ensembl chr 9:52,726,885...52,790,706
JBrowse link
regulation of translation involved in cellular response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RPL26 ribosomal protein L26 IEA Ensembl GO_REF:0000107 NCBI chr12:53,548,313...53,553,453
Ensembl chr12:53,548,321...53,553,451
JBrowse link
response to blue light term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CPT1B carnitine palmitoyltransferase 1B IEA
ISS
Ensembl
UniProt
GO_REF:0000024, GO_REF:0000107 NCBI chr 5:155,552...163,536
Ensembl chr 5:151,906...163,546
JBrowse link
G DCT dopachrome tautomerase ISS UniProt GO_REF:0000024 NCBI chr11:63,584,865...63,647,486
Ensembl chr11:63,584,866...63,678,314
JBrowse link
G KCNJ10 potassium inwardly rectifying channel subfamily J member 10 ISO RGD PMID:18450590 RGD:2326038 NCBI chr 4:90,421,956...90,457,406
Ensembl chr 4:90,422,025...90,457,407
JBrowse link
G TYR tyrosinase IEA Ensembl GO_REF:0000107 NCBI chr 9:22,517,047...22,604,290
Ensembl chr 9:22,517,047...22,604,290
JBrowse link
response to high light intensity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MMP9 matrix metallopeptidase 9 ISO RGD PMID:17854381 RGD:8547925 NCBI chr17:48,179,690...48,186,782
Ensembl chr17:48,175,056...48,188,264
JBrowse link
G RDH13 retinol dehydrogenase 13 IEA Ensembl GO_REF:0000107 NCBI chr 6:59,274,383...59,293,139
Ensembl chr 6:59,274,380...59,314,697
JBrowse link
response to light intensity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BDNF brain derived neurotrophic factor ISO RGD PMID:21076359 RGD:8655612 NCBI chr 2:32,623,668...32,679,293
Ensembl chr 2:32,623,268...32,679,164
JBrowse link
G CAT catalase ISO RGD PMID:17514533 RGD:9107626 NCBI chr 2:26,493,664...26,533,881
Ensembl chr 2:26,487,653...26,581,452
JBrowse link
G CNTF ciliary neurotrophic factor ISO RGD PMID:21076359 RGD:8655612 NCBI chr 2:12,492,777...12,495,401 JBrowse link
G EXT1 exostosin glycosyltransferase 1 IEA Ensembl GO_REF:0000107 NCBI chr 4:20,645,002...20,935,769
Ensembl chr 4:20,645,809...20,935,564
JBrowse link
G GNAT1 G protein subunit alpha transducin 1 ISO RGD PMID:11931744 RGD:1599009 NCBI chr13:32,671,377...32,678,394
Ensembl chr13:32,671,432...32,678,394
JBrowse link
G GNAT2 G protein subunit alpha transducin 2 ISO RGD PMID:17591908 RGD:2302146 NCBI chr 4:110,512,349...110,523,222
Ensembl chr 4:110,513,213...110,523,071
JBrowse link
G KCNC1 potassium voltage-gated channel subfamily C member 1 ISO RGD PMID:18708127 RGD:9685740 NCBI chr 2:41,362,208...41,407,935
Ensembl chr 2:41,362,347...41,408,127
JBrowse link
G KCNC2 potassium voltage-gated channel subfamily C member 2 ISO RGD PMID:18708127 RGD:9685740 NCBI chr 5:38,326,408...38,535,826
Ensembl chr 5:38,326,408...38,533,110
JBrowse link
G MT-ND3 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 3 ISO RGD PMID:15277468 RGD:2302310 NCBI chr MT:10,653...10,998
Ensembl chr MT:10,653...10,998
JBrowse link
response to low light intensity stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 ISO RGD PMID:1683769 RGD:2326143 NCBI chr16:27,936,225...27,957,261
Ensembl chr16:27,936,217...27,957,194
JBrowse link
G PRPH2 peripherin 2 ISO RGD PMID:8320859 RGD:8553226 NCBI chr 7:37,788,547...37,805,142
Ensembl chr 7:37,790,178...37,805,142
JBrowse link
response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFF3 AF4/FMR2 family member 3 IEA Ensembl GO_REF:0000107 NCBI chr 3:54,135,476...54,730,201
Ensembl chr 3:54,135,532...54,862,224
JBrowse link
G BRSK1 BR serine/threonine kinase 1 IEA Ensembl GO_REF:0000107 NCBI chr 6:59,468,289...59,499,062
Ensembl chr 6:59,468,146...59,501,129
JBrowse link
G C14H10orf90 chromosome 14 C10orf90 homolog ISO (MGI:5285148|PMID:20843368) UniProt PMID:20843368 MGI:5285148 NCBI chr14:135,718,618...135,954,019
Ensembl chr14:135,718,623...135,954,334
JBrowse link
G CASP3 caspase 3 IEA Ensembl GO_REF:0000107 NCBI chr15:45,744,320...45,753,252
Ensembl chr15:45,742,749...45,763,773
JBrowse link
G CASP7 caspase 7 IEA Ensembl GO_REF:0000107 NCBI chr14:124,017,776...124,050,369
Ensembl chr14:124,018,568...124,050,366
JBrowse link
G CASP9 caspase 9 ISO (MGI:3691523|PMID:11092819) MGI PMID:11092819 MGI:3691523 NCBI chr 6:74,707,597...74,730,033
Ensembl chr 6:74,706,515...74,730,092
JBrowse link
G CAT catalase ISO RGD PMID:12592055 RGD:9179775 NCBI chr 2:26,493,664...26,533,881
Ensembl chr 2:26,487,653...26,581,452
JBrowse link
G CCAR2 cell cycle and apoptosis regulator 2 IEA Ensembl GO_REF:0000107 NCBI chr14:6,860,052...6,874,334
Ensembl chr14:6,859,663...6,874,331
JBrowse link
G CDKN1A cyclin dependent kinase inhibitor 1A ISO (MGI:2675761|PMID:12952892) MGI PMID:12952892 MGI:2675761 NCBI chr 7:32,354,776...32,363,771
Ensembl chr 7:32,359,455...32,363,761
JBrowse link
G CDKN2D cyclin dependent kinase inhibitor 2D IEA Ensembl GO_REF:0000107 NCBI chr 2:69,337,428...69,339,998
Ensembl chr 2:69,337,855...69,339,999
JBrowse link
G CIRBP cold inducible RNA binding protein ISO (PMID:11574538) UniProtKB PMID:11574538 NCBI chr 2:77,185,295...77,194,373
Ensembl chr 2:77,047,910...77,200,559
JBrowse link
G DDB2 damage specific DNA binding protein 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:15,342,614...15,370,623
Ensembl chr 2:15,337,743...15,383,116
JBrowse link
G DTL denticleless E3 ubiquitin protein ligase homolog IEA Ensembl GO_REF:0000107 NCBI chr 9:131,225,840...131,275,426
Ensembl chr 9:131,182,423...131,275,451
JBrowse link
G ELANE elastase, neutrophil expressed IEA Ensembl GO_REF:0000107 NCBI chr 2:77,513,769...77,516,118
Ensembl chr 2:77,509,344...77,516,027
JBrowse link
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:51,734,318...51,757,508
Ensembl chr 6:51,734,319...51,779,624
JBrowse link
G ERCC3 ERCC excision repair 3, TFIIH core complex helicase subunit IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:25,189,644...25,224,381
Ensembl chr15:25,189,663...25,228,066
JBrowse link
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit ISO (PMID:16678501) UniProtKB PMID:16678501 NCBI chr 3:29,266,234...29,306,109
Ensembl chr 3:29,266,236...29,306,116
JBrowse link
G ERCC5 ERCC excision repair 5, endonuclease ISO (PMID:16167068)
(MGI:3041918|PMID:15082767)
(PMID:8710877)
UniProtKB
MGI
PMID:8710877, PMID:15082767, PMID:16167068 MGI:3041918 NCBI chr11:71,141,823...71,168,326
Ensembl chr11:71,141,798...71,168,321
JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor ISO (PMID:16916636)
(MGI:3054497|PMID:15340056), (MGI:3655576|PMID:10843671)
UniProtKB
MGI
PMID:10843671, PMID:15340056, PMID:16916636 MGI:3054497, MGI:3655576 NCBI chr14:89,998,125...90,075,911
Ensembl chr14:90,002,024...90,075,898
JBrowse link
G ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit IEA Ensembl GO_REF:0000107 NCBI chr16:39,704,602...39,770,330
Ensembl chr16:39,701,701...39,770,315
JBrowse link
G HUS1 HUS1 checkpoint clamp component IEA Ensembl GO_REF:0000107 NCBI chr18:48,522,914...48,539,267
Ensembl chr18:48,522,997...48,538,788
JBrowse link
G MAP2K7 mitogen-activated protein kinase kinase 7 IEA Ensembl GO_REF:0000107 NCBI chr 2:71,299,010...71,308,432
Ensembl chr 2:71,298,322...71,308,165
JBrowse link
G MAP4K3 mitogen-activated protein kinase kinase kinase kinase 3 IEA Ensembl GO_REF:0000107 NCBI chr 3:100,887,148...101,084,667
Ensembl chr 3:100,886,834...101,084,678
JBrowse link
G MAPK8 mitogen-activated protein kinase 8 IEA Ensembl GO_REF:0000107 NCBI chr14:88,988,914...89,108,875
Ensembl chr14:88,988,949...89,172,200
JBrowse link
G MEN1 menin 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:7,358,130...7,364,952
Ensembl chr 2:7,357,951...7,365,128
JBrowse link
G MSH6 mutS homolog 6 IEA Ensembl GO_REF:0000107 NCBI chr 3:92,792,590...92,814,154
Ensembl chr 3:92,785,664...92,814,128
JBrowse link
G PCLAF PCNA clamp associated factor ISO (PMID:23000965) UniProtKB PMID:23000965 NCBI chr 1:107,659,509...107,669,477
Ensembl chr 1:107,659,501...107,670,978
JBrowse link
G PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 ISO (MGI:2675761|PMID:12952892) MGI PMID:12952892 MGI:2675761 NCBI chr 1:161,184,458...161,188,138
Ensembl chr 1:161,182,868...161,188,164
JBrowse link
G PML PML nuclear body scaffold IEA Ensembl GO_REF:0000107 NCBI chr 7:59,405,044...59,450,155
Ensembl chr 7:59,405,048...59,450,150
JBrowse link
G PRIMPOL primase and DNA directed polymerase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:45,764,261...45,851,052
Ensembl chr15:45,709,710...45,851,421
JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 IEA Ensembl GO_REF:0000107 NCBI chr16:25,745,902...25,783,524
Ensembl chr16:25,745,321...25,783,610
JBrowse link
G RAD18 RAD18 E3 ubiquitin protein ligase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:65,253,416...65,359,506
Ensembl chr13:65,253,418...65,359,280
JBrowse link
G REV1 REV1 DNA directed polymerase IEA Ensembl GO_REF:0000107 NCBI chr 3:54,775,602...54,862,704
Ensembl chr 3:54,135,532...54,862,224
JBrowse link
G RO60 Ro60, Y RNA binding protein IEA Ensembl GO_REF:0000107 NCBI chr10:694,335...725,378
Ensembl chr10:694,445...725,340
JBrowse link
G RPAIN RPA interacting protein ISO (PMID:16135809) MGI PMID:16135809 NCBI chr12:51,553,130...51,562,419
Ensembl chr12:51,553,130...51,562,743
JBrowse link
G SPRTN SprT-like N-terminal domain IEA Ensembl GO_REF:0000107 NCBI chr14:59,177,801...59,192,221
Ensembl chr14:59,171,170...59,192,270
JBrowse link
G TIPIN TIMELESS interacting protein IEA Ensembl GO_REF:0000107 NCBI chr 1:164,349,196...164,369,297
Ensembl chr 1:164,350,703...164,369,225
JBrowse link
G TP53 tumor protein p53 ISO (MGI:2675761|PMID:12952892)
(MGI:1858868|PMID:10815637), (MGI:3691523|PMID:11092819)
(MGI:3032464|PMID:14744935)
RGD
MGI
PMID:10815637, PMID:11092819, PMID:12952892, PMID:14744935, PMID:17724205 MGI:1858868, MGI:2675761, MGI:3032464, MGI:3691523, RGD:2290562 NCBI chr12:52,939,643...52,953,786
Ensembl chr12:52,939,643...52,953,819
JBrowse link
G TP53I13 tumor protein p53 inducible protein 13 IEA Ensembl GO_REF:0000107 NCBI chr12:45,763,680...45,767,755
Ensembl chr12:45,763,700...45,768,156
JBrowse link
G TREX1 three prime repair exonuclease 1 ISO (MGI:5908297|PMID:28351661) MGI PMID:28351661 MGI:5908297 NCBI chr13:31,177,604...31,180,764
Ensembl chr13:31,178,601...31,180,592
JBrowse link
G TRIM32 tripartite motif containing 32 IEA Ensembl GO_REF:0000107 NCBI chr 1:257,051,421...257,066,911
Ensembl chr 1:257,054,227...257,066,910
JBrowse link
G TYR tyrosinase ISO RGD PMID:6175546 RGD:8694330 NCBI chr 9:22,517,047...22,604,290
Ensembl chr 9:22,517,047...22,604,290
JBrowse link
G UACA uveal autoantigen with coiled-coil domains and ankyrin repeats ISO (MGI:3056865|PMID:15271982) MGI PMID:15271982 MGI:3056865 NCBI chr 1:168,353,655...168,453,175
Ensembl chr 1:168,350,557...168,530,087
JBrowse link
G UBE2A ubiquitin conjugating enzyme E2 A IEA Ensembl GO_REF:0000107 NCBI chr  X:97,925,136...98,007,551
Ensembl chr  X:97,925,131...98,013,194
JBrowse link
G UBE2B ubiquitin conjugating enzyme E2 B IEA Ensembl GO_REF:0000107 NCBI chr 2:136,652,764...136,667,213
Ensembl chr 2:136,652,784...136,667,949
JBrowse link
G UBE4B ubiquitination factor E4B IEA Ensembl GO_REF:0000107 NCBI chr 6:70,345,789...70,462,434
Ensembl chr 6:70,345,813...70,462,434
JBrowse link
G USF1 upstream transcription factor 1 IEA Ensembl GO_REF:0000107 NCBI chr 4:89,395,133...89,401,048
Ensembl chr 4:89,395,195...89,401,047
JBrowse link
G USP1 ubiquitin specific peptidase 1 IEA Ensembl GO_REF:0000107 NCBI chr 6:149,971,471...149,985,946
Ensembl chr 6:149,970,915...149,985,506
JBrowse link
G UVSSA UV stimulated scaffold protein A IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 8:573,299...602,617
Ensembl chr 8:573,421...601,944
JBrowse link
G XPA XPA, DNA damage recognition and repair factor ISO (MGI:3655576|PMID:10843671) MGI PMID:10843671 MGI:3655576 NCBI chr 1:239,532,331...239,568,589
Ensembl chr 1:239,532,246...239,568,649
JBrowse link
G ZRANB3 zinc finger RANBP2-type containing 3 IEA Ensembl GO_REF:0000107 NCBI chr15:16,414,291...16,727,659
Ensembl chr15:16,414,757...16,727,842
JBrowse link
response to UV-A term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKT1 AKT serine/threonine kinase 1 ISO (PMID:18483258) BHF-UCL PMID:18483258
G CCND1 cyclin D1 IEA Ensembl GO_REF:0000107 NCBI chr 2:3,621,242...3,633,380
Ensembl chr 2:3,621,246...3,633,296
JBrowse link
G CRYAA crystallin alpha A IEA Ensembl GO_REF:0000107 NCBI chr13:206,293,877...206,297,050 JBrowse link
G EGFR epidermal growth factor receptor IEA Ensembl GO_REF:0000107 NCBI chr 9:139,302,410...139,474,632
Ensembl chr 9:139,300,022...139,478,882
JBrowse link
response to UV-B term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2 BCL2 apoptosis regulator ISO (MGI:1330635|PMID:10200548) MGI PMID:10200548 MGI:1330635 NCBI chr 1:158,337,403...158,518,214
Ensembl chr 1:158,288,544...158,518,879
JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor IEA Ensembl GO_REF:0000107 NCBI chr14:89,998,125...90,075,911
Ensembl chr14:90,002,024...90,075,898
JBrowse link
G HMGN1 high mobility group nucleosome binding domain 1 ISO (MGI:3590574|PMID:12660172) MGI PMID:12660172 MGI:3590574 NCBI chr13:202,936,313...202,943,496
Ensembl chr13:202,905,233...202,943,538
JBrowse link
G IL12A interleukin 12A IEA Ensembl GO_REF:0000107 NCBI chr13:99,733,394...99,741,078
Ensembl chr13:99,733,394...99,741,078
JBrowse link
G IL12B interleukin 12B IEA Ensembl GO_REF:0000107 NCBI chr16:64,143,268...64,158,929
Ensembl chr16:64,147,247...64,158,952
JBrowse link
G IVL involucrin ISO (PMID:16639001) UniProtKB PMID:16639001 NCBI chr 4:96,656,033...96,658,737
Ensembl chr 4:96,656,033...96,658,737
JBrowse link
G MSH2 mutS homolog 2 IEA Ensembl GO_REF:0000107 NCBI chr 3:93,082,958...93,163,556
Ensembl chr 3:93,081,219...93,163,628
JBrowse link
G RELA RELA proto-oncogene, NF-kB subunit IEA Ensembl GO_REF:0000107 NCBI chr 2:6,594,869...6,602,684
Ensembl chr 2:6,593,969...6,603,471
JBrowse link
G TP53 tumor protein p53 ISO RGD PMID:22559303 RGD:8547754 NCBI chr12:52,939,643...52,953,786
Ensembl chr12:52,939,643...52,953,819
JBrowse link
G XPC XPC complex subunit, DNA damage recognition and repair factor IEA Ensembl GO_REF:0000107 NCBI chr13:70,348,841...70,397,194
Ensembl chr13:70,348,864...70,397,782
JBrowse link
response to UV-C term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAK1 BCL2 antagonist/killer 1 ISO RGD PMID:19520675 RGD:2316118 NCBI chr 7:29,808,849...29,815,345 JBrowse link
G BCL3 BCL3 transcription coactivator IEA Ensembl GO_REF:0000107 NCBI chr 6:51,256,033...51,264,923
Ensembl chr 6:51,256,033...51,265,355
JBrowse link
G BRCA2 BRCA2 DNA repair associated ISO (MGI:1203345|PMID:9660919) MGI PMID:9660919 MGI:1203345 NCBI chr11:8,805,950...8,858,128 JBrowse link
G DCUN1D3 defective in cullin neddylation 1 domain containing 3 IEA Ensembl GO_REF:0000107 NCBI chr 3:25,151,501...25,196,051
Ensembl chr 3:25,151,616...25,188,524
JBrowse link
G ERCC5 ERCC excision repair 5, endonuclease ISO (PMID:17208056) UniProtKB PMID:17208056 NCBI chr11:71,141,823...71,168,326
Ensembl chr11:71,141,798...71,168,321
JBrowse link
G HMGN1 high mobility group nucleosome binding domain 1 ISO (MGI:3590574|PMID:12660172) MGI PMID:12660172 MGI:3590574 NCBI chr13:202,936,313...202,943,496
Ensembl chr13:202,905,233...202,943,538
JBrowse link
G MAP3K4 mitogen-activated protein kinase kinase kinase 4 IEA Ensembl GO_REF:0000107 NCBI chr 1:6,891,255...7,049,784
Ensembl chr 1:6,891,255...7,050,374
JBrowse link
G POLH DNA polymerase eta ISO (PMID:17563354) UniProtKB PMID:17563354 NCBI chr 7:38,569,211...38,601,794
Ensembl chr 7:38,567,775...38,601,790
JBrowse link
G WRN WRN RecQ like helicase IEA Ensembl GO_REF:0000107 NCBI chr15:53,966,968...54,094,855
Ensembl chr15:53,966,972...54,094,587
JBrowse link
G YY1 YY1 transcription factor IEA Ensembl GO_REF:0000107 NCBI chr 7:121,132,168...121,170,699
Ensembl chr 7:121,131,917...121,170,697
JBrowse link
rhodopsin mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GNAT1 G protein subunit alpha transducin 1 ISO RGD PMID:11931744 RGD:1599009 NCBI chr13:32,671,377...32,678,394
Ensembl chr13:32,671,432...32,678,394
JBrowse link
G OPN4 opsin 4 ISO (MGI:4438311|PMID:19793992) MGI PMID:19793992 MGI:4438311 NCBI chr14:87,645,563...87,660,820
Ensembl chr14:87,644,240...87,722,245
JBrowse link
G PCP2 Purkinje cell protein 2 ISO (MGI:3817370|PMID:18768681) MGI PMID:18768681 MGI:3817370 NCBI chr 2:71,471,071...71,519,394
Ensembl chr 2:71,471,616...71,519,399
JBrowse link
G RHO rhodopsin ISS UniProt GO_REF:0000024 NCBI chr13:68,908,578...68,913,651
Ensembl chr13:68,908,578...68,913,651
JBrowse link
short-day photoperiodism term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NPY neuropeptide Y ISO RGD PMID:19490367 RGD:6480663 NCBI chr18:47,985,796...47,993,726
Ensembl chr18:47,985,725...47,993,289
JBrowse link
UV protection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAT catalase IEA Ensembl GO_REF:0000107 NCBI chr 2:26,493,664...26,533,881
Ensembl chr 2:26,487,653...26,581,452
JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit ISO (MGI:1342943|PMID:10454634)
(MGI:3692264|PMID:16682947)
(MGI:63544|PMID:8275084)
MGI PMID:8275084, PMID:10454634, PMID:16682947 MGI:1342943, MGI:3692264, MGI:63544 NCBI chr 6:51,783,537...51,808,898 JBrowse link
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit IEA Ensembl GO_REF:0000107 NCBI chr 6:51,734,318...51,757,508
Ensembl chr 6:51,734,319...51,779,624
JBrowse link
G ERCC3 ERCC excision repair 3, TFIIH core complex helicase subunit IEA Ensembl GO_REF:0000107 NCBI chr15:25,189,644...25,224,381
Ensembl chr15:25,189,663...25,228,066
JBrowse link
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit IEA Ensembl GO_REF:0000107 NCBI chr 3:29,266,234...29,306,109
Ensembl chr 3:29,266,236...29,306,116
JBrowse link
G ERCC5 ERCC excision repair 5, endonuclease ISO (PMID:7510366)
(MGI:82906|PMID:8703115)
(MGI:77034|PMID:7510366)
MGI PMID:7510366, PMID:8703115 MGI:77034, MGI:82906 NCBI chr11:71,141,823...71,168,326
Ensembl chr11:71,141,798...71,168,321
JBrowse link
G GPX1 glutathione peroxidase 1 IEA Ensembl GO_REF:0000107 NCBI chr13:31,916,269...31,917,337
Ensembl chr13:31,914,932...31,917,335
JBrowse link
G MFAP4 microfibril associated protein 4 IEA Ensembl GO_REF:0000107 NCBI chr12:60,141,488...60,144,214
Ensembl chr12:60,137,566...60,144,201
JBrowse link
G SDF4 stromal cell derived factor 4 ISO PMID:18355758 BHF-UCL PMID:18355758 RGD:8554427 NCBI chr 6:63,529,853...63,539,979
Ensembl chr 6:63,529,853...63,545,235
JBrowse link
G XPA XPA, DNA damage recognition and repair factor IEA Ensembl GO_REF:0000107 NCBI chr 1:239,532,331...239,568,589
Ensembl chr 1:239,532,246...239,568,649
JBrowse link
UV-damage excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTR5 actin related protein 5 IEA Ensembl GO_REF:0000107 NCBI chr17:41,702,273...41,724,398
Ensembl chr17:41,702,273...41,724,394
JBrowse link
G CUL4B cullin 4B IEA Ensembl GO_REF:0000107 NCBI chr  X:98,668,945...98,730,582
Ensembl chr  X:98,668,945...98,730,602
JBrowse link
G DDB1 damage specific DNA binding protein 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:10,171,554...10,201,602
Ensembl chr 2:10,171,499...10,201,602
JBrowse link
G DDB2 damage specific DNA binding protein 2 IEA Ensembl GO_REF:0000107 NCBI chr 2:15,342,614...15,370,623
Ensembl chr 2:15,337,743...15,383,116
JBrowse link
G INO80 INO80 complex ATPase subunit IEA Ensembl GO_REF:0000107 NCBI chr 1:130,201,705...130,341,627
Ensembl chr 1:130,201,718...130,342,840
JBrowse link
G LOC100621538 histone H2A type 3 IEA Ensembl GO_REF:0000107 NCBI chr 2:51,688,375...51,704,824
Ensembl chr 2:51,693,853...51,694,245
JBrowse link
G MC1R melanocortin 1 receptor IEA Ensembl GO_REF:0000107 NCBI chr 6:181,225...182,187
Ensembl chr 6:181,225...182,187
JBrowse link
G SIRT1 sirtuin 1 IEA Ensembl GO_REF:0000107 NCBI chr14:71,091,167...71,126,351
Ensembl chr14:71,091,157...71,123,299
JBrowse link
G XPA XPA, DNA damage recognition and repair factor IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:239,532,331...239,568,589
Ensembl chr 1:239,532,246...239,568,649
JBrowse link
G XPC XPC complex subunit, DNA damage recognition and repair factor ISO (PMID:8077226)
(MGI:5427285|PMID:22431748)
CACAO
MGI
PMID:8077226, PMID:22431748 MGI:5427285 NCBI chr13:70,348,841...70,397,194
Ensembl chr13:70,348,864...70,397,782
JBrowse link
UV-damage excision repair, DNA incision term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G XPC XPC complex subunit, DNA damage recognition and repair factor IEA Ensembl GO_REF:0000107 NCBI chr13:70,348,841...70,397,194
Ensembl chr13:70,348,864...70,397,782
JBrowse link
visual behavior term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DYNLRB1 dynein light chain roadblock-type 1 ISO PMID:10816553 UniProt PMID:10816553 RGD:633064 NCBI chr17:37,923,451...37,941,851
Ensembl chr17:37,923,475...37,945,880
JBrowse link
G SLC1A2 solute carrier family 1 member 2 IEA Ensembl GO_REF:0000107 NCBI chr 2:25,603,892...25,771,840
Ensembl chr 2:25,604,950...25,848,276
JBrowse link
visual learning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA7 ATP binding cassette subfamily A member 7 ISO (MGI:5774886|PMID:27030769) ARUK-UCL PMID:27030769 MGI:5774886 NCBI chr 2:77,357,161...77,375,349
Ensembl chr 2:77,357,211...77,375,180
JBrowse link
G ABCC8 ATP binding cassette subfamily C member 8 ISO RGD PMID:24114458 RGD:10003028 NCBI chr 2:41,666,974...41,754,624
Ensembl chr 2:41,666,909...41,754,620
JBrowse link
G ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase ISO (MGI:5315777|PMID:22357865) MGI PMID:22357865 MGI:5315777 NCBI chr 9:120,888,891...120,984,724
Ensembl chr 9:120,892,926...120,985,119
JBrowse link
G ADAM2 ADAM metallopeptidase domain 2 IEA Ensembl GO_REF:0000107 NCBI chr15:47,207,727...47,278,315
Ensembl chr15:47,207,722...47,278,315
JBrowse link
G ADRA1B adrenoceptor alpha 1B ISO (MGI:1932224|PMID:11222061) MGI PMID:11222061 MGI:1932224 NCBI chr16:63,550,123...64,010,838
Ensembl chr16:63,550,128...63,603,034
JBrowse link
G AP1S2 adaptor related protein complex 1 subunit sigma 2 ISO (MGI:5617942|PMID:20203623) MGI PMID:20203623 MGI:5617942 NCBI chr  X:12,367,785...12,397,672
Ensembl chr  X:12,367,156...12,398,496
JBrowse link
G APBB1 amyloid beta precursor protein binding family B member 1 ISO (MGI:3522016|PMID:14689444) MGI PMID:14689444 MGI:3522016 NCBI chr 9:3,303,032...3,323,828
Ensembl chr 9:3,303,019...3,323,828
JBrowse link
G APP amyloid beta precursor protein IEA Ensembl GO_REF:0000107 NCBI chr13:189,434,854...189,716,120
Ensembl chr13:189,434,869...189,716,057
JBrowse link
G ATP1A2 ATPase Na+/K+ transporting subunit alpha 2 ISO (MGI:3696486|PMID:17234593) MGI PMID:17234593 MGI:3696486 NCBI chr 4:90,341,316...90,371,040
Ensembl chr 4:90,291,344...90,396,160
JBrowse link
G ATP1A3 ATPase Na+/K+ transporting subunit alpha 3 IEA Ensembl GO_REF:0000107 NCBI chr 6:49,905,851...49,927,437 JBrowse link
G ATXN1 ataxin 1 ISO (MGI:1270078|PMID:9651231)
(MGI:4818500|PMID:20628574)
MGI PMID:9651231, PMID:20628574 MGI:1270078, MGI:4818500 NCBI chr 7:12,299,938...12,730,850
Ensembl chr 7:12,300,999...12,720,718
JBrowse link
G B4GALT2 beta-1,4-galactosyltransferase 2 ISO (MGI:3849110|PMID:19265195) MGI PMID:19265195 MGI:3849110 NCBI chr 6:167,305,903...167,316,009
Ensembl chr 6:167,305,907...167,315,871
JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase IEA Ensembl GO_REF:0000107 NCBI chr18:8,957,963...9,132,558
Ensembl chr18:8,957,959...9,132,553
JBrowse link
G CACNA1C calcium voltage-gated channel subunit alpha1 C ISO (MGI:3607037|PMID:16251435) MGI PMID:16251435 MGI:3607037 NCBI chr 5:69,016,954...69,448,428 JBrowse link
G CACNA1E calcium voltage-gated channel subunit alpha1 E ISO (MGI:1932239|PMID:11263998) MGI PMID:11263998 MGI:1932239 NCBI chr 9:122,827,386...123,318,372
Ensembl chr 9:122,931,808...123,317,141
JBrowse link
G CCK cholecystokinin ISO RGD PMID:12450740 RGD:1626100 NCBI chr13:25,940,674...25,945,879
Ensembl chr13:25,937,645...25,946,197
JBrowse link
G CDK5 cyclin dependent kinase 5 IEA Ensembl GO_REF:0000107 NCBI chr18:6,166,914...6,171,157 JBrowse link
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit IEA Ensembl GO_REF:0000107 NCBI chr 4:95,196,992...95,211,084
Ensembl chr 4:95,198,717...95,211,037
JBrowse link
G CKAP5 cytoskeleton associated protein 5 ISO (MGI:5546446|PMID:23936366) MGI PMID:23936366 MGI:5546446 NCBI chr 2:15,680,723...15,790,580
Ensembl chr 2:15,680,787...15,792,633
JBrowse link
G CREB1 cAMP responsive element binding protein 1 ISO RGD PMID:25031400 RGD:10059390 NCBI chr15:110,705,548...110,773,037
Ensembl chr15:110,697,408...110,771,755
JBrowse link
G CRHR1 corticotropin releasing hormone receptor 1 ISO postnatal blockade improves adult learning and memory RGD PMID:15932935 RGD:1626241 NCBI chr12:17,251,361...17,306,308 JBrowse link
G CTNS cystinosin, lysosomal cystine transporter IEA Ensembl GO_REF:0000107 NCBI chr12:49,730,741...49,754,362
Ensembl chr12:49,730,955...49,753,208
JBrowse link
G DBH dopamine beta-hydroxylase IEA Ensembl GO_REF:0000107 NCBI chr 1:273,204,407...273,225,562
Ensembl chr 1:273,204,400...273,225,558
JBrowse link
G DCDC2 doublecortin domain containing 2 ISO (MGI:5442271|PMID:21883923), (MGI:5698331|PMID:25130614) MGI PMID:21883923, PMID:25130614 MGI:5442271, MGI:5698331 NCBI chr 7:19,044,229...19,219,055
Ensembl chr 7:19,048,088...19,219,075
JBrowse link
G DDHD2 DDHD domain containing 2 IEA Ensembl GO_REF:0000107 NCBI chr15:48,239,932...48,292,413
Ensembl chr15:48,238,740...48,292,181
JBrowse link
G DEAF1 DEAF1 transcription factor ISO (MGI:5576037|PMID:24726472) UniProt PMID:24726472 MGI:5576037 NCBI chr 2:404,514...427,584
Ensembl chr 2:404,532...427,542
JBrowse link
G DRD1 dopamine receptor D1 IEA Ensembl GO_REF:0000107 NCBI chr16:49,189,555...49,193,722
Ensembl chr16:49,188,936...49,193,709
JBrowse link
G DRD2 dopamine receptor D2 IEA Ensembl GO_REF:0000107 NCBI chr 9:41,068,618...41,135,262
Ensembl chr 9:41,068,779...41,133,599
JBrowse link
G DRD3 dopamine receptor D3 IEA Ensembl GO_REF:0000107 NCBI chr13:145,769,294...145,817,997
Ensembl chr13:145,771,510...145,819,173
JBrowse link
G DRD5 dopamine receptor D5 ISO RGD PMID:17142305 RGD:1600982 NCBI chr 8:6,180,221...6,182,575
Ensembl chr 8:6,180,221...6,181,636
JBrowse link
G FOXB1 forkhead box B1 IEA Ensembl GO_REF:0000107 NCBI chr 1:111,997,638...112,000,550
Ensembl chr 1:111,997,640...112,000,550
JBrowse link
G GRIN1 glutamate ionotropic receptor NMDA type subunit 1 IEA Ensembl GO_REF:0000107
G GRIN2A glutamate ionotropic receptor NMDA type subunit 2A IEA Ensembl GO_REF:0000107 NCBI chr 3:32,749,329...33,149,350
Ensembl chr 3:32,752,351...33,143,499
JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha IEA Ensembl GO_REF:0000107 NCBI chr 1:190,625,436...190,673,926
Ensembl chr 1:190,625,181...190,674,850
JBrowse link
G HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase IEA Ensembl GO_REF:0000107 NCBI chr 2:84,380,245...84,401,117
Ensembl chr 2:84,380,225...84,402,956
JBrowse link
G HRH1 histamine receptor H1 IEA Ensembl GO_REF:0000107 NCBI chr13:67,209,261...67,411,174
Ensembl chr13:67,209,127...67,411,171
JBrowse link
G HRH2 histamine receptor H2 IEA Ensembl GO_REF:0000107 NCBI chr 2:81,883,670...81,932,464
Ensembl chr 2:81,883,670...81,932,275
JBrowse link
G HTT huntingtin ISO (MGI:73644|PMID:7774020) MGI PMID:7774020 MGI:73644 NCBI chr 8:1,809,768...1,934,002
Ensembl chr 8:1,809,785...1,934,024
JBrowse link
G IDUA alpha-L-iduronidase ISO (MGI:3771256|PMID:18022143) MGI PMID:18022143 MGI:3771256 NCBI chr 8:334,604...351,970
Ensembl chr 8:334,599...351,970
JBrowse link
G IFT20 intraflagellar transport 20 IEA Ensembl GO_REF:0000107 NCBI chr12:44,609,586...44,616,685
Ensembl chr12:44,609,586...44,616,669
JBrowse link
G ITGB1 integrin subunit beta 1 IEA Ensembl GO_REF:0000107 NCBI chr10:56,078,393...56,130,608
Ensembl chr10:56,078,398...56,173,795
JBrowse link
G KIT KIT proto-oncogene, receptor tyrosine kinase ISO RGD PMID:11112797 RGD:2292520 NCBI chr 8:41,402,334...41,492,306
Ensembl chr 8:41,402,043...41,493,735
JBrowse link
G KMT2A lysine methyltransferase 2A IEA Ensembl GO_REF:0000107 NCBI chr 9:45,743,566...45,828,559 JBrowse link
G KRAS KRAS proto-oncogene, GTPase IEA Ensembl GO_REF:0000107 NCBI chr 5:48,508,774...48,546,260
Ensembl chr 5:48,508,790...48,549,346
JBrowse link
G LRRN4 leucine rich repeat neuronal 4 ISO (MGI:5428894|PMID:15870286) MGI PMID:15870286 MGI:5428894 NCBI chr17:14,895,954...14,908,112 JBrowse link
G MECP2 methyl-CpG binding protein 2 ISO (MGI:3611151|PMID:16399702) MGI PMID:16399702 MGI:3611151 NCBI chr  X:124,735,523...124,789,063
Ensembl chr  X:124,735,656...124,789,110
JBrowse link
G MEIS2 Meis homeobox 2 IEA Ensembl GO_REF:0000107 NCBI chr 1:134,013,642...134,223,013
Ensembl chr 1:134,013,820...134,223,012
JBrowse link
G MTOR mechanistic target of rapamycin kinase ISO RGD PMID:20599569 RGD:10041021 NCBI chr 6:71,286,989...71,412,913
Ensembl chr 6:71,286,989...71,412,888
JBrowse link
G NDRG4 NDRG family member 4 IEA Ensembl GO_REF:0000107 NCBI chr 6:20,222,876...20,265,581
Ensembl chr 6:20,223,871...20,265,577
JBrowse link
G NETO1 neuropilin and tolloid like 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:150,711,486...150,821,626
Ensembl chr 1:150,711,627...150,817,473
JBrowse link
G NF1 neurofibromin 1 IEA Ensembl GO_REF:0000107 NCBI chr12:43,487,098...43,754,205
Ensembl chr12:43,489,171...43,754,176
JBrowse link
G NLGN3 neuroligin 3 IEA Ensembl GO_REF:0000107 NCBI chr  X:57,174,506...57,204,770
Ensembl chr  X:57,176,103...57,201,486
JBrowse link
G NOG noggin ISO RGD PMID:12740172 RGD:10423996 NCBI chr12:32,891,321...32,892,206
Ensembl chr12:32,891,321...32,892,206
JBrowse link
G NPS neuropeptide S IEA Ensembl GO_REF:0000107 NCBI chr14:136,835,630...136,839,511
Ensembl chr14:136,836,352...136,839,510
JBrowse link
G NPTN neuroplastin ISO RGD PMID:21480899 RGD:9835376 NCBI chr 7:59,768,414...59,840,594
Ensembl chr 7:59,713,204...59,840,594
JBrowse link
G NTS neurotensin ISO RGD PMID:20219557 RGD:9743918 NCBI chr 5:96,261,299...96,272,947
Ensembl chr 5:96,261,375...96,272,824
JBrowse link
G PDE1B phosphodiesterase 1B IEA Ensembl GO_REF:0000107 NCBI chr 5:19,725,346...19,752,892
Ensembl chr 5:19,725,415...19,752,890
JBrowse link
G PDE8B phosphodiesterase 8B ISO (MGI:5525232|PMID:22925203) MGI PMID:22925203 MGI:5525232 NCBI chr 2:86,007,190...86,323,796 JBrowse link
G PIAS1 protein inhibitor of activated STAT 1 ISO RGD PMID:25031400 RGD:10059390 NCBI chr 1:165,957,114...166,087,242
Ensembl chr 1:165,853,126...166,087,240
JBrowse link
G PPP1R1B protein phosphatase 1 regulatory inhibitor subunit 1B IEA Ensembl GO_REF:0000107 NCBI chr12:22,681,244...22,690,978
Ensembl chr12:22,654,924...22,690,953
JBrowse link
G PTPRZ1 protein tyrosine phosphatase receptor type Z1 ISO RGD PMID:12737936 RGD:9590120 NCBI chr18:25,046,027...25,228,276
Ensembl chr18:25,045,727...25,228,247
JBrowse link
G RAG1 recombination activating 1 ISO RGD PMID:22964459 RGD:12907572 NCBI chr 2:24,565,447...24,573,853
Ensembl chr 2:24,565,449...24,602,590
JBrowse link
G RGS14 regulator of G protein signaling 14 ISO PMID:19574389 UniProt PMID:19574389 RGD:8553361 NCBI chr 2:80,574,411...80,589,998
Ensembl chr 2:80,574,411...80,590,003
JBrowse link
G RIC8A RIC8 guanine nucleotide exchange factor A IEA Ensembl GO_REF:0000107 NCBI chr 2:32,135...37,682
Ensembl chr 2:32,215...39,360
JBrowse link
G SCT secretin ISO (MGI:4939559|PMID:21159798) MGI PMID:21159798 MGI:4939559 NCBI chr 2:382,783...385,082
Ensembl chr 2:383,799...384,642
JBrowse link
G SGK1 serum/glucocorticoid regulated kinase 1 ISO both spacial learning and enrichment-induced spatial learning facilitation RGD PMID:14656333 RGD:1642778 NCBI chr 1:29,625,786...29,753,619
Ensembl chr 1:29,625,781...29,753,607
JBrowse link
G SLC7A11 solute carrier family 7 member 11 IEA Ensembl GO_REF:0000107 NCBI chr 8:88,608,083...88,690,589
Ensembl chr 8:88,607,884...88,940,100
JBrowse link
G SYNGAP1 synaptic Ras GTPase activating protein 1 IEA Ensembl GO_REF:0000107 NCBI chr 7:29,723,745...29,752,351
Ensembl chr 7:29,723,774...29,753,934
JBrowse link
G SYNPO synaptopodin IEA Ensembl GO_REF:0000107 NCBI chr 2:151,571,264...151,634,103
Ensembl chr 2:151,585,274...151,632,099
JBrowse link
G TAFA2 TAFA chemokine like family member 2 ISO (MGI:6282943|PMID:30137205) UniProt PMID:30137205 MGI:6282943 NCBI chr 5:26,391,969...26,893,517
Ensembl chr 5:26,391,992...26,559,821
JBrowse link
G TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 IEA Ensembl GO_REF:0000107 NCBI chr15:65,920,168...66,166,000
Ensembl chr15:65,920,219...66,203,512
JBrowse link
G TTC36 tetratricopeptide repeat domain 36 ISO (MGI:6362140|PMID:31537781) MGI PMID:31537781 MGI:6362140 NCBI chr 9:45,829,014...45,838,978
Ensembl chr 9:45,829,191...45,838,979
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16548
    response to stimulus 8985
      response to abiotic stimulus 1469
        response to radiation 530
          response to light stimulus 349
            cellular response to light stimulus + 113
            cone photoresponse recovery 0
            de-etiolation 0
            detection of light stimulus + 51
            energy quenching + 0
            photoperiodism + 37
            photoprotection 0
            phototaxis + 0
            response to UV + 157
            response to blue light + 4
            response to light intensity + 17
            response to red or far red light + 1
            visual behavior + 76
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.