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ONTOLOGY REPORT - ANNOTATIONS


Term:response to light stimulus
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Accession:GO:0009416 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light.


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response to light stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aanat aralkylamine N-acetyltransferase IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:18001324, PMID:21873635 RGD:2301033, RGD:13792537 NCBI chr10:105,568,091...105,572,407
Ensembl chr10:105,568,091...105,572,403
JBrowse link
G Asns asparagine synthetase (glutamine-hydrolyzing) IEP transpupillary thermotherapy laser RGD PMID:16885923 RGD:2302304 NCBI chr 4:33,742,876...33,761,106
Ensembl chr 4:33,743,364...33,761,163
JBrowse link
G Bdnf brain-derived neurotrophic factor IEP RGD PMID:17640634 RGD:8655603 NCBI chr 3:100,768,637...100,819,216
Ensembl chr 3:100,768,637...100,819,210
JBrowse link
G Bhlhe40 basic helix-loop-helix family, member e40 IDA
IEP
ISO
PMID:12397359
(PMID:15038852)
RGD PMID:15038852, PMID:12397359, PMID:12397359 RGD:625726, RGD:625726 NCBI chr 4:140,703,619...140,709,319
Ensembl chr 4:140,703,619...140,709,319
JBrowse link
G Clock clock circadian regulator IEP RGD PMID:10471199 RGD:10401879 NCBI chr14:34,418,226...34,502,218
Ensembl chr14:34,446,616...34,502,218
JBrowse link
G Clu clusterin IEP RGD PMID:11803476 RGD:9062370 NCBI chr15:42,626,612...42,665,858
Ensembl chr15:42,640,146...42,665,857
JBrowse link
G Cry1 cryptochrome circadian regulator 1 ISS
ISO
GO_REF:0000024
(MGI:6294193|PMID:29561690)
UniProt
RGD
PMID:29561690 GO_REF:0000024, MGI:6294193 NCBI chr 7:24,534,593...24,634,098
Ensembl chr 7:24,534,615...24,634,097
JBrowse link
G Cry2 cryptochrome circadian regulator 2 ISO
ISS
(PMID:15751956)
(MGI:6294193|PMID:29561690)
GO_REF:0000024
RGD
UniProt
PMID:15751956, PMID:29561690 GO_REF:0000024, MGI:6294193 NCBI chr 3:81,314,151...81,344,143
Ensembl chr 3:81,314,149...81,344,110
JBrowse link
G Dnm2 dynamin 2 IEP RGD PMID:22666495 RGD:9685159 NCBI chr 8:22,458,869...22,540,649
Ensembl chr 8:22,458,899...22,540,524
JBrowse link
G Drd2 dopamine receptor D2 ISO MGI:2387895 (MGI:3639799|PMID:16715079) RGD PMID:16715079 MGI:3639799 NCBI chr 8:53,678,777...53,743,643
Ensembl chr 8:53,678,777...53,743,642
JBrowse link
G Dusp1 dual specificity phosphatase 1 IEP RGD PMID:15527789 RGD:2298681 NCBI chr10:16,970,642...16,973,425
Ensembl chr10:16,970,626...16,973,418
JBrowse link
G Dynlrb1 dynein light chain roadblock-type 1 IEP RGD PMID:10816553 RGD:633064 NCBI chr 3:150,761,329...150,782,493
Ensembl chr 3:150,761,329...150,782,493
JBrowse link
G Elk1 ETS transcription factor ELK1 IDA RGD PMID:10383826 RGD:7488912 NCBI chr  X:1,287,875...1,304,822
Ensembl chr  X:1,297,099...1,304,822
JBrowse link
G Fech ferrochelatase ISO MGI:1858114 (MGI:50545|PMID:1939658) RGD PMID:1939658 MGI:50545 NCBI chr18:59,941,992...59,975,192
Ensembl chr18:59,941,992...59,975,192
JBrowse link
G Fmr1 FMRP translational regulator 1 IEP RGD PMID:15564573 RGD:1601175 NCBI chr  X:154,684,924...154,722,369
Ensembl chr  X:154,684,935...154,722,314
JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit IEP RGD PMID:11146118 RGD:2293791 NCBI chr 6:109,300,433...109,303,299
Ensembl chr 6:109,300,433...109,303,299
JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit IEP RGD PMID:11146118 RGD:2293791 NCBI chr 6:25,598,936...25,616,995
Ensembl chr 6:25,598,936...25,616,995
JBrowse link
G Gh1 growth hormone 1 IDA RGD PMID:19091612 RGD:2315626 NCBI chr10:94,486,204...94,488,181
Ensembl chr10:94,486,205...94,488,180
JBrowse link
G Gja10 gap junction protein, alpha 10 ISO MGI:3043946 (MGI:3654563|PMID:16820008) RGD PMID:16820008 MGI:3654563 NCBI chr 5:47,819,484...47,841,138
Ensembl chr 5:47,835,066...47,836,586
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A IEP RGD PMID:19850826 RGD:2325946 NCBI chr10:5,707,806...6,123,568
Ensembl chr10:5,930,298...6,119,990
JBrowse link
G Grk1 G protein-coupled receptor kinase 1 IEP
ISO
MGI:2668595 (MGI:1334014|PMID:10097103) RGD PMID:10097103, PMID:3950623 MGI:1334014, RGD:1600007 NCBI chr16:81,153,489...81,165,442
Ensembl chr16:81,153,489...81,165,442
JBrowse link
G Junb JunB proto-oncogene, AP-1 transcription factor subunit IEP RGD PMID:11146118 RGD:2293791 NCBI chr19:26,092,972...26,094,756
Ensembl chr19:26,092,974...26,094,756
JBrowse link
G Jund JunD proto-oncogene, AP-1 transcription factor subunit IEP RGD PMID:11146118 RGD:2293791 NCBI chr16:20,485,028...20,486,707
Ensembl chr16:20,485,029...20,486,707
JBrowse link
G Kmt2a lysine methyltransferase 2A ISO MGI:3839794 (MGI:5638946|PMID:25834037) RGD PMID:25834037 MGI:5638946 NCBI chr 8:49,110,407...49,185,872
Ensembl chr 8:49,114,990...49,158,971
JBrowse link
G Mapk10 mitogen activated protein kinase 10 ISS
ISO
GO_REF:0000024
(MGI:5431019|PMID:22441692)
UniProt
RGD
PMID:22441692 GO_REF:0000024, MGI:5431019 NCBI chr14:8,079,955...8,371,508
Ensembl chr14:8,080,275...8,368,254
JBrowse link
G Mat2a methionine adenosyltransferase 2A IEP RGD PMID:15504733 RGD:1598692 NCBI chr 4:100,297,478...100,303,047
Ensembl chr 4:100,296,075...100,303,080
JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 IEP RGD PMID:17640634 RGD:8655603 NCBI chr17:5,934,651...6,245,778
Ensembl chr17:5,933,729...6,244,676
JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase IEP RGD PMID:15979612 RGD:8694099 NCBI chr 4:145,282,828...145,289,367
Ensembl chr 4:145,282,797...145,289,326
JBrowse link
G Opn4 opsin 4 NOT ISO (MGI:5925970|PMID:26320947) RGD PMID:26320947 MGI:5925970 NCBI chr16:10,943,353...10,966,602
Ensembl chr16:10,943,341...10,952,549
JBrowse link
G Per1 period circadian regulator 1 ISO
IBA
(PMID:15038852)
PMID:21873635
RGD PMID:15038852, PMID:21873635 RGD:13792537 NCBI chr10:55,681,761...55,696,557
Ensembl chr10:55,687,050...55,695,994
JBrowse link
G Per2 period circadian regulator 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:98,555,154...98,597,362
Ensembl chr 9:98,555,169...98,597,359
JBrowse link
G Per3 period circadian regulator 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:168,088,126...168,123,482
Ensembl chr 5:168,086,998...168,123,395
JBrowse link
G Polg DNA polymerase gamma, catalytic subunit IEP RGD PMID:15979612 RGD:8694099 NCBI chr 1:141,172,117...141,188,893
Ensembl chr 1:141,172,531...141,188,031
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma ISO (MGI:3830801|PMID:19041764) RGD PMID:19041764 MGI:3830801 NCBI chr 4:147,274,055...147,399,383
Ensembl chr 4:147,274,107...147,399,380
JBrowse link
G Rho rhodopsin ISO MGI:2181812 (MGI:3655007|PMID:16723493) RGD PMID:16723493 MGI:3655007 NCBI chr 4:147,832,136...147,837,298
Ensembl chr 4:147,832,136...147,837,298
JBrowse link
G Ric8a RIC8 guanine nucleotide exchange factor A ISO MGI:3608888 (MGI:3692154|PMID:16221497) RGD PMID:16221497 MGI:3692154 NCBI chr 1:213,606,599...213,612,905
Ensembl chr 1:213,606,599...213,612,904
JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 IEP RGD PMID:17389522 RGD:9585654 NCBI chr 2:266,141,581...266,169,197
Ensembl chr 2:266,141,581...266,169,197
JBrowse link
G Slc1a2 solute carrier family 1 member 2 ISO MGI:2449707 (MGI:1203466|PMID:9539795) RGD PMID:9539795 MGI:1203466 NCBI chr 3:92,518,679...92,665,731
Ensembl chr 3:92,640,752...92,665,644
JBrowse link
G Slc1a3 solute carrier family 1 member 3 IEA
ISO
GO_REF:0000107
MGI:1931872 (MGI:1203466|PMID:9539795)
Ensembl
RGD
PMID:9539795 GO_REF:0000107, MGI:1203466 NCBI chr 2:57,860,881...57,935,363
Ensembl chr 2:57,860,834...57,935,363
JBrowse link
G Slc4a10 solute carrier family 4 member 10 ISO MGI:3774019 (MGI:3772751|PMID:18165320) RGD PMID:18165320 MGI:3772751 NCBI chr 3:47,995,812...48,287,897
Ensembl chr 3:47,995,959...48,287,910
JBrowse link
G Syne1 spectrin repeat containing nuclear envelope protein 1 IEP RGD PMID:8700883 RGD:632616 NCBI chr 1:41,608,287...41,763,591
NCBI chr 1:41,844,840...42,086,662
Ensembl chr 1:41,608,418...42,077,535
JBrowse link
G Th tyrosine hydroxylase IEP RGD PMID:21185915 RGD:5128767 NCBI chr 1:216,073,034...216,080,287
Ensembl chr 1:216,073,031...216,080,287
JBrowse link
absorption of visible light term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rho rhodopsin ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 4:147,832,136...147,837,298
Ensembl chr 4:147,832,136...147,837,298
JBrowse link
adaptation of rhodopsin mediated signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rdh11 retinol dehydrogenase 11 ISO MGI:3586379 (MGI:3584215|PMID:15790565) RGD PMID:15790565 MGI:3584215 NCBI chr 6:102,356,498...102,372,618
Ensembl chr 6:102,356,492...102,372,611
JBrowse link
G Rs1 retinoschisin 1 ISO MGI:3056058 (MGI:3055638|PMID:15326152) RGD PMID:15326152 MGI:3055638 NCBI chr  X:35,749,957...35,777,243
Ensembl chr  X:35,749,957...35,777,243
JBrowse link
cellular response to high light intensity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt2 AKT serine/threonine kinase 2 IEA
ISO
GO_REF:0000107
MGI:2158456 (MGI:3695811|PMID:17202487)
Ensembl
RGD
PMID:17202487 GO_REF:0000107, MGI:3695811 NCBI chr 1:84,400,939...84,451,223
Ensembl chr 1:84,411,726...84,450,162
JBrowse link
cellular response to light stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crb1 crumbs cell polarity complex component 1 ISO (MGI:3696487|PMID:17234588) RGD PMID:17234588 MGI:3696487 NCBI chr13:56,270,519...56,462,893
Ensembl chr13:56,270,781...56,462,834
JBrowse link
G Gpr88 G-protein coupled receptor 88 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:219,258,346...219,263,819
Ensembl chr 2:219,258,347...219,262,901
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha IEP RGD PMID:17475674 RGD:9068879 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052
JBrowse link
G Kcne1 potassium voltage-gated channel subfamily E regulatory subunit 1 IEP RGD PMID:24202060 RGD:12910722 NCBI chr11:32,498,260...32,511,202
Ensembl chr11:32,498,261...32,508,420
JBrowse link
G Opn1mw opsin 1, medium wave sensitive IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:156,569,683...156,589,907
Ensembl chr  X:156,569,683...156,589,907
JBrowse link
G Opn1sw opsin 1, short wave sensitive IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:56,653,840...56,656,980
Ensembl chr 4:56,653,844...56,656,980
JBrowse link
G Opn3 opsin 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:93,716,481...93,746,994
Ensembl chr13:93,716,481...93,746,994
JBrowse link
G Opn4 opsin 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:10,943,353...10,966,602
Ensembl chr16:10,943,341...10,952,549
JBrowse link
G Opn5 opsin 5 IBA
ISO
PMID:21873635
(MGI:6376341|PMID:31607531)
RGD PMID:31607531, PMID:21873635 MGI:6376341, RGD:13792537 NCBI chr 9:21,045,457...21,092,517
Ensembl chr 9:21,045,457...21,093,172
JBrowse link
G Rgr retinal G protein coupled receptor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:14,286,323...14,300,972
Ensembl chr16:14,286,323...14,300,951
JBrowse link
G Rho rhodopsin IEA
ISO
IBA
GO_REF:0000107
(MGI:4849309|PMID:21052544)
PMID:21873635
Ensembl
RGD
PMID:21052544, PMID:21873635 GO_REF:0000107, MGI:4849309, RGD:13792537 NCBI chr 4:147,832,136...147,837,298
Ensembl chr 4:147,832,136...147,837,298
JBrowse link
G Rp1 RP1, axonemal microtubule associated ISO (MGI:4849309|PMID:21052544) RGD PMID:21052544 MGI:4849309 NCBI chr 5:15,005,028...15,060,508
Ensembl chr 5:15,043,955...15,060,508
JBrowse link
G Rpgr retinitis pigmentosa GTPase regulator ISO MGI:2386674 (MGI:1354839|PMID:10725384) RGD PMID:10725384 MGI:1354839 NCBI chr  X:14,271,012...14,331,745
Ensembl chr  X:14,271,017...14,331,486
JBrowse link
G Rrh retinal pigment epithelium derived rhodopsin homolog IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:235,237,422...235,250,474
Ensembl chr 2:235,237,414...235,249,575
JBrowse link
G Trpm1 transient receptor potential cation channel, subfamily M, member 1 IEA
ISO
GO_REF:0000107
MGI:4421441 (MGI:4398796|PMID:19861548), (MGI:4420740|PMID:19966281), (MGI:4849309|PMID:21052544)
(PMID:19896109)
Ensembl
RGD
PMID:19861548, PMID:19896109, PMID:19966281, PMID:21052544 GO_REF:0000107, MGI:4398796, MGI:4420740, MGI:4849309 NCBI chr 1:124,983,391...125,101,759
Ensembl chr 1:124,983,452...125,099,573
JBrowse link
cellular response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 ISO
ISS
(PMID:19424603)
GO_REF:0000024
RGD
UniProt
PMID:19424603 GO_REF:0000024 NCBI chr 4:85,551,503...85,563,683
Ensembl chr 4:85,551,502...85,569,360
JBrowse link
G Atf4 activating transcription factor 4 ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 7:121,480,723...121,482,781
Ensembl chr 7:121,480,723...121,482,772
JBrowse link
G Atr ATR serine/threonine kinase ISO (PMID:9925639) RGD PMID:9925639 NCBI chr 8:103,673,578...103,770,886
Ensembl chr 8:103,673,411...103,770,947
JBrowse link
G Aurkb aurora kinase B ISO
ISS
(PMID:20959462)
GO_REF:0000024
RGD
UniProt
PMID:20959462 GO_REF:0000024 NCBI chr10:55,625,860...55,632,399
Ensembl chr10:55,626,741...55,634,991
JBrowse link
G Bak1 BCL2-antagonist/killer 1 ISO (PMID:15901672)
(MGI:3689797|PMID:15901672)
RGD PMID:15901672 MGI:3689797 NCBI chr20:5,609,620...5,618,899
Ensembl chr20:5,609,625...5,618,260
JBrowse link
G Bax BCL2 associated X, apoptosis regulator IEA
ISO
GO_REF:0000107
MGI:98834 (MGI:3042308|PMID:14963330)
Ensembl
RGD
PMID:14963330 GO_REF:0000107, MGI:3042308 NCBI chr 1:101,451,801...101,457,207
Ensembl chr 1:101,451,802...101,457,207
JBrowse link
G Bmf Bcl2 modifying factor ISO (PMID:23629966)
(MGI:5490676|PMID:23629966)
RGD PMID:23629966 MGI:5490676 NCBI chr 3:110,303,515...110,324,125
Ensembl chr 3:110,306,067...110,324,084
JBrowse link
G Casp9 caspase 9 ISO (PMID:15657060) RGD PMID:15657060 NCBI chr 5:160,356,211...160,373,774
Ensembl chr 5:160,355,833...160,373,778
JBrowse link
G Cdc25a cell division cycle 25A IEA
ISO
GO_REF:0000107
(PMID:19966869)
Ensembl
RGD
PMID:19966869 GO_REF:0000107 NCBI chr 8:117,953,223...117,971,552
Ensembl chr 8:117,953,444...117,971,519
JBrowse link
G Cops9 COP9 signalosome subunit 9 ISO (PMID:26456823) RGD PMID:26456823 NCBI chr 9:99,813,332...99,818,262
Ensembl chr 9:99,813,332...99,818,262
JBrowse link
G Crebbp CREB binding protein IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:24939902)
Ensembl
UniProt
RGD
PMID:24939902 GO_REF:0000024, GO_REF:0000107 NCBI chr10:11,590,994...11,721,039
Ensembl chr10:11,595,044...11,721,039
JBrowse link
G Ddias DNA damage-induced apoptosis suppressor ISO (MGI:3718924|PMID:17515607) RGD PMID:17515607 MGI:3718924 NCBI chr 1:157,675,754...157,700,064
Ensembl chr 1:157,675,765...157,700,064
JBrowse link
G Dhx36 DEAH-box helicase 36 ISS
ISO
GO_REF:0000024
(PMID:27940037)
UniProt
RGD
PMID:27940037 GO_REF:0000024 NCBI chr 2:152,785,844...152,824,549
Ensembl chr 2:152,785,844...152,824,547
JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 ISO (MGI:5700311|PMID:12176355) RGD PMID:12176355 MGI:5700311 NCBI chr 3:110,159,624...110,245,382
Ensembl chr 3:110,159,708...110,249,217
JBrowse link
G Eif2s1 eukaryotic translation initiation factor 2 subunit alpha ISS
ISO
GO_REF:0000024
(MGI:5700311|PMID:12176355)
UniProt
RGD
PMID:12176355 GO_REF:0000024, MGI:5700311 NCBI chr 6:102,048,372...102,073,041
Ensembl chr 6:102,048,372...102,073,041
JBrowse link
G Ep300 E1A binding protein p300 ISO (PMID:24939902) RGD PMID:24939902 NCBI chr 7:122,818,194...122,889,055
Ensembl chr 7:122,818,975...122,861,296
JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit ISO UniProtKB:Q15554 (PMID:17055345) RGD PMID:17055345 NCBI chr10:2,010,140...2,037,953
Ensembl chr10:2,010,648...2,037,891
JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 ISO (PMID:17873522) RGD PMID:17873522 NCBI chr 2:184,230,191...184,309,805
Ensembl chr 2:184,231,260...184,309,664
JBrowse link
G Fmr1 FMRP translational regulator 1 ISS
ISO
GO_REF:0000024
(MGI:5602914|PMID:24813610)
UniProt
RGD
PMID:24813610 GO_REF:0000024, MGI:5602914 NCBI chr  X:154,684,924...154,722,369
Ensembl chr  X:154,684,935...154,722,314
JBrowse link
G Ino80 INO80 complex ATPase subunit ISO (PMID:18026119) RGD PMID:18026119 NCBI chr 3:111,186,371...111,266,542
Ensembl chr 3:111,187,711...111,266,542
JBrowse link
G Kdm1a lysine demethylase 1A ISO (PMID:24217620) RGD PMID:24217620 NCBI chr 5:154,909,003...154,965,171
Ensembl chr 5:154,909,003...154,965,171
JBrowse link
G Mapk13 mitogen activated protein kinase 13 IEA
ISO
GO_REF:0000107
(PMID:9218798)
Ensembl
RGD
PMID:9218798 GO_REF:0000107 NCBI chr20:6,018,374...6,027,467
Ensembl chr20:6,018,374...6,027,473
JBrowse link
G Mapk9 mitogen-activated protein kinase 9 IMP RGD PMID:8875991 RGD:2304246 NCBI chr10:35,333,859...35,374,364
Ensembl chr10:35,333,859...35,374,355
JBrowse link
G Mettl3 methyltransferase-like 3 ISO (PMID:28297716) RGD PMID:28297716 NCBI chr15:28,710,299...28,721,491
Ensembl chr15:28,710,300...28,721,127
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO (PMID:17873522) RGD PMID:17873522 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link
G N4bp1 Nedd4 binding protein 1 ISO (PMID:17592138)
(MGI:3829128|PMID:17592138)
RGD PMID:17592138 MGI:3829128 NCBI chr19:21,218,123...21,268,539
Ensembl chr19:21,218,465...21,266,964
JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase ISO (PMID:17996703) RGD PMID:17996703 NCBI chr 8:79,323,408...79,408,842
Ensembl chr 8:79,323,408...79,408,833
JBrowse link
G Nfatc4 nuclear factor of activated T-cells 4 ISO MGI:97583 (MGI:3709926|PMID:17242187) RGD PMID:17242187 MGI:3709926 NCBI chr15:34,493,163...34,502,238
Ensembl chr15:34,493,138...34,504,326
JBrowse link
G Noc2l NOC2-like nucleolar associated transcriptional repressor ISO (PMID:20959462) RGD PMID:20959462 NCBI chr 5:173,659,796...173,672,699
Ensembl chr 5:173,660,921...173,672,459
JBrowse link
G Npm1 nucleophosmin 1 ISO (PMID:19160485) RGD PMID:19160485 NCBI chr10:18,080,949...18,091,062
Ensembl chr10:18,080,950...18,090,950
JBrowse link
G Nsmce3 NSE3 homolog, SMC5-SMC6 complex component ISO (PMID:27427983) RGD PMID:27427983 NCBI chr 1:125,663,987...125,665,314 JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 ISO (PMID:24289924) RGD PMID:24289924 NCBI chr13:98,857,255...98,889,444
Ensembl chr13:98,857,177...98,889,716
JBrowse link
G Pbk PDZ binding kinase ISO MGI:5293435 (MGI:5293269|PMID:21715333) RGD PMID:21715333 MGI:5293269 NCBI chr15:42,489,253...42,500,377
Ensembl chr15:42,489,377...42,500,395
JBrowse link
G Pcna proliferating cell nuclear antigen IEP
ISS
ISO
GO_REF:0000024
(PMID:24939902)
UniProt
RGD
PMID:24939902, PMID:8905661 GO_REF:0000024, RGD:10448977 NCBI chr 3:124,880,698...124,884,570
Ensembl chr 3:124,880,698...124,884,570
JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 ISO MGI:103296|MGI:2149414 (MGI:3709926|PMID:17242187) RGD PMID:17242187 MGI:3709926 NCBI chr 2:31,742,326...31,826,882
Ensembl chr 2:31,745,088...31,826,867
JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit ISO
ISS
(PMID:24939902)
GO_REF:0000024
RGD
UniProt
PMID:24939902 GO_REF:0000024 NCBI chr 1:100,538,066...100,554,105
Ensembl chr 1:100,537,900...100,554,488
JBrowse link
G Polk DNA polymerase kappa ISO (PMID:28297716) RGD PMID:28297716 NCBI chr 2:27,305,718...27,364,906
Ensembl chr 2:27,305,728...27,364,906
JBrowse link
G Ppp1r15a protein phosphatase 1, regulatory subunit 15A IEP RGD PMID:9811446 RGD:9999409 NCBI chr 1:101,511,899...101,515,043
Ensembl chr 1:101,511,901...101,514,974
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 IEP RGD PMID:22306367 RGD:5688265 NCBI chr13:67,351,230...67,356,920
Ensembl chr13:67,351,087...67,359,335
JBrowse link
G Ptn pleiotrophin IEP RGD PMID:17925408 RGD:10044023 NCBI chr 4:64,239,156...64,330,996
Ensembl chr 4:64,239,158...64,330,996
JBrowse link
G Ptprk protein tyrosine phosphatase, receptor type, K ISO (PMID:16849327) RGD PMID:16849327 NCBI chr 1:17,445,052...18,058,266
Ensembl chr 1:17,446,417...18,058,055
JBrowse link
G Rhbdd1 rhomboid domain containing 1 ISS
ISO
GO_REF:0000024
(MGI:5430884|PMID:19358743)
UniProt
RGD
PMID:19358743 GO_REF:0000024, MGI:5430884 NCBI chr 9:88,110,731...88,229,462
Ensembl chr 9:88,110,731...88,229,479
JBrowse link
G Rhno1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 ISO (PMID:21659603) RGD PMID:21659603 NCBI chr 4:161,679,674...161,685,060
Ensembl chr 4:161,680,027...161,681,660
JBrowse link
G Rnf168 ring finger protein 168 ISO (MGI:5562615|PMID:24217620) RGD PMID:24217620 MGI:5562615 NCBI chr11:71,721,242...71,743,421
Ensembl chr11:71,721,250...71,743,421
JBrowse link
G Rpl26 ribosomal protein L26 ISO (PMID:16213212) RGD PMID:16213212 NCBI chr10:55,492,417...55,495,547
Ensembl chr10:55,492,404...55,496,012
JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 ISO (PMID:18026119) RGD PMID:18026119 NCBI chr 1:101,413,766...101,426,970
Ensembl chr 1:101,413,766...101,426,852
JBrowse link
G Sde2 SDE2 telomere maintenance homolog IEA
ISO
GO_REF:0000107
(PMID:27906959)
Ensembl
RGD
PMID:27906959 GO_REF:0000107 NCBI chr13:99,136,921...99,153,187
Ensembl chr13:99,136,871...99,153,181
JBrowse link
G Taf1 TATA-box binding protein associated factor 1 ISO (PMID:24289924) RGD PMID:24289924 NCBI chr  X:71,412,291...71,486,456
Ensembl chr  X:71,412,289...71,485,085
JBrowse link
G Tmem161a transmembrane protein 161A ISO (PMID:16551573) RGD PMID:16551573 NCBI chr16:20,985,841...20,996,351
Ensembl chr16:20,986,687...20,994,379
JBrowse link
G Tp53 tumor protein p53 ISO (PMID:16213212), (PMID:23629966)
MGI:99702 (MGI:3042308|PMID:14963330), (MGI:5490676|PMID:23629966)
RGD PMID:14963330, PMID:16213212, PMID:23629966 MGI:3042308, MGI:5490676 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
G Tp53inp1 tumor protein p53 inducible nuclear protein 1 IEA
ISO
GO_REF:0000107
(MGI:2153600|PMID:11557757)
Ensembl
RGD
PMID:11557757 GO_REF:0000107, MGI:2153600 NCBI chr 5:24,402,895...24,419,651
Ensembl chr 5:24,410,863...24,416,888
JBrowse link
G Trex1 three prime repair exonuclease 1 ISO (MGI:5014018|PMID:20511593) RGD PMID:20511593 MGI:5014018 NCBI chr 8:117,796,127...117,797,427
Ensembl chr 8:117,796,128...117,797,427
JBrowse link
G Triap1 TP53 regulated inhibitor of apoptosis 1 ISO (PMID:15735003) RGD PMID:15735003 NCBI chr12:46,987,404...46,989,906
Ensembl chr12:46,987,404...46,989,897
Ensembl chr12:46,987,404...46,989,897
JBrowse link
G Usp28 ubiquitin specific peptidase 28 IEA
ISO
GO_REF:0000107
(PMID:17873522)
Ensembl
RGD
PMID:17873522 GO_REF:0000107 NCBI chr 8:53,295,188...53,355,572
Ensembl chr 8:53,295,222...53,355,572
JBrowse link
G Usp47 ubiquitin specific peptidase 47 ISO (MGI:4839431|PMID:19966869) RGD PMID:19966869 MGI:4839431 NCBI chr 1:176,854,589...176,937,763
Ensembl chr 1:176,854,653...176,937,763
JBrowse link
G Yy1 YY1 transcription factor ISO (PMID:18026119) RGD PMID:18026119 NCBI chr 6:132,702,443...132,726,848
Ensembl chr 6:132,702,448...132,727,046
JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 ISO (PMID:24657165) RGD PMID:24657165 NCBI chr 6:99,401,775...99,425,739
Ensembl chr 6:99,402,360...99,424,019
JBrowse link
cellular response to UV-A term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cers1 ceramide synthase 1 ISO (PMID:19800881) RGD PMID:19800881 NCBI chr16:20,845,580...20,860,789
Ensembl chr16:20,845,576...20,860,789
JBrowse link
G Mme membrane metallo-endopeptidase ISO
ISS
(PMID:20876573)
GO_REF:0000024
RGD
UniProt
PMID:20876573 GO_REF:0000024 NCBI chr 2:153,799,203...153,880,910
Ensembl chr 2:153,803,349...153,880,738
JBrowse link
G Mmp1 matrix metallopeptidase 1 ISO (PMID:31380578) RGD PMID:31380578 NCBI chr 8:5,703,206...5,723,593
Ensembl chr 8:5,703,206...5,723,591
JBrowse link
G Mmp2 matrix metallopeptidase 2 ISO
ISS
IEA
(PMID:31380578)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:31380578 GO_REF:0000024, GO_REF:0000107 NCBI chr19:15,542,771...15,570,589
Ensembl chr19:15,542,765...15,570,611
JBrowse link
G Mmp3 matrix metallopeptidase 3 ISO
ISS
(PMID:31380578)
GO_REF:0000024
RGD
UniProt
PMID:31380578 GO_REF:0000024 NCBI chr 8:5,676,608...5,698,579
Ensembl chr 8:5,676,665...5,698,579
JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO
IEA
(PMID:31380578)
GO_REF:0000107
RGD
Ensembl
PMID:31380578 GO_REF:0000107 NCBI chr 3:161,413,410...161,421,473
Ensembl chr 3:161,413,298...161,421,520
JBrowse link
G Opn1sw opsin 1, short wave sensitive ISO
ISS
IEA
(PMID:31380578)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:31380578 GO_REF:0000024, GO_REF:0000107 NCBI chr 4:56,653,840...56,656,980
Ensembl chr 4:56,653,844...56,656,980
JBrowse link
G Opn3 opsin 3 ISO
IEA
(PMID:31380578)
GO_REF:0000107
RGD
Ensembl
PMID:31380578 GO_REF:0000107 NCBI chr13:93,716,481...93,746,994
Ensembl chr13:93,716,481...93,746,994
JBrowse link
G Opn5 opsin 5 ISO
IEA
(PMID:31380578)
GO_REF:0000107
RGD
Ensembl
PMID:31380578 GO_REF:0000107 NCBI chr 9:21,045,457...21,092,517
Ensembl chr 9:21,045,457...21,093,172
JBrowse link
G Ppid peptidylprolyl isomerase D ISO
ISS
(PMID:23220213)
GO_REF:0000024
RGD
UniProt
PMID:23220213 GO_REF:0000024 NCBI chr 2:178,354,830...178,366,843
Ensembl chr 2:178,354,890...178,366,685
JBrowse link
G Timp1 TIMP metallopeptidase inhibitor 1 ISO
ISS
(PMID:31380578)
GO_REF:0000024
RGD
UniProt
PMID:31380578 GO_REF:0000024 NCBI chr  X:1,364,771...1,369,451
Ensembl chr  X:1,364,786...1,369,384
JBrowse link
cellular response to UV-B term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn1a cyclin-dependent kinase inhibitor 1A ISO (MGI:5613877|PMID:25329316) RGD PMID:25329316 MGI:5613877 NCBI chr20:6,348,422...6,358,864
Ensembl chr20:6,351,458...6,358,864
JBrowse link
G Crip1 cysteine rich protein 1 ISO
ISS
(PMID:20415737) RGD PMID:20415737, PMID:20415737 RGD:8553326 NCBI chr 6:137,959,171...137,967,042
Ensembl chr 6:137,959,171...137,967,042
JBrowse link
G Hyal1 hyaluronidase 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:21699545)
Ensembl
UniProt
RGD
PMID:21699545 GO_REF:0000024, GO_REF:0000107 NCBI chr 8:116,332,834...116,337,522
Ensembl chr 8:116,332,796...116,335,435
JBrowse link
G Hyal2 hyaluronidase 2 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:21699545)
Ensembl
UniProt
RGD
PMID:21699545 GO_REF:0000024, GO_REF:0000107 NCBI chr 8:116,324,062...116,328,978
Ensembl chr 8:116,324,040...116,328,978
JBrowse link
G Hyal3 hyaluronidase 3 IEA
ISO
GO_REF:0000107
(PMID:21699545)
Ensembl
RGD
PMID:21699545 GO_REF:0000107 NCBI chr 8:116,336,512...116,342,147
Ensembl chr 8:116,336,512...116,342,146
JBrowse link
G Mfap4 microfibril associated protein 4 ISO (PMID:22355679) RGD PMID:22355679 NCBI chr10:47,765,463...47,768,484
Ensembl chr10:47,765,432...47,768,483
JBrowse link
G Mme membrane metallo-endopeptidase ISO
ISS
(PMID:20876573)
GO_REF:0000024
RGD
UniProt
PMID:20876573 GO_REF:0000024 NCBI chr 2:153,799,203...153,880,910
Ensembl chr 2:153,803,349...153,880,738
JBrowse link
G Rpl13a ribosomal protein L13A IEP RGD PMID:10483362 RGD:11036101 NCBI chr 1:101,120,325...101,123,401
Ensembl chr 1:101,120,325...101,123,402
JBrowse link
G Rpl35 ribosomal protein L35 IEP RGD PMID:10483362 RGD:11036101 NCBI chr 3:23,294,813...23,297,774
Ensembl chr 3:23,294,814...23,297,774
JBrowse link
G Stk11 serine/threonine kinase 11 IEA
ISO
GO_REF:0000107
(MGI:5613877|PMID:25329316)
(PMID:25329316)
Ensembl
RGD
PMID:25329316 GO_REF:0000107, MGI:5613877 NCBI chr 7:12,440,751...12,457,513
Ensembl chr 7:12,440,751...12,457,513
JBrowse link
cellular response to UV-C term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ei24 EI24, autophagy associated transmembrane protein ISO MGI:98834 (MGI:5543725|PMID:24014029) RGD PMID:24014029 MGI:5543725 NCBI chr 8:39,254,883...39,271,238
Ensembl chr 8:39,254,889...39,266,959
JBrowse link
G Impact impact RWD domain protein ISS
ISO
GO_REF:0000024
(MGI:5576818|PMID:24333428)
UniProt
RGD
PMID:24333428 GO_REF:0000024, MGI:5576818 NCBI chr18:4,325,872...4,346,734
Ensembl chr18:4,325,875...4,346,769
JBrowse link
G Mdm2 MDM2 proto-oncogene IEP RGD PMID:14558917 RGD:2317408 NCBI chr 7:60,719,060...60,743,618
Ensembl chr 7:60,719,066...60,743,328
JBrowse link
G Polh DNA polymerase eta ISO MGI:1347081|MGI:3614412 (MGI:3695544|PMID:17114294) RGD PMID:17114294 MGI:3695544 NCBI chr 9:17,163,354...17,198,006
Ensembl chr 9:17,163,354...17,197,132
JBrowse link
G Poli DNA polymerase iota ISO MGI:1891457|MGI:3055735 (MGI:3695544|PMID:17114294) RGD PMID:17114294 MGI:3695544 NCBI chr18:65,749,107...65,768,805
Ensembl chr18:65,748,908...65,768,781
JBrowse link
G RGD1306233 similar to hypothetical protein MGC29761 ISO (MGI:4868626|PMID:21159655) RGD PMID:21159655 MGI:4868626 NCBI chr 3:7,047,603...7,051,953
Ensembl chr 3:7,047,603...7,051,953
JBrowse link
G Tp53 tumor protein p53 ISO MGI:108090 (MGI:5543725|PMID:24014029) RGD PMID:24014029 MGI:5543725 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
dark adaptation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tent2 terminal nucleotidyltransferase 2 IEP RGD PMID:23700402 RGD:11041783 NCBI chr 2:22,746,290...22,798,252
Ensembl chr 2:22,747,547...22,798,214
JBrowse link
detection of light stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde6b phosphodiesterase 6B ISO MGI:1856373 (MGI:2155023|PMID:11747369) RGD PMID:11747369 MGI:2155023 NCBI chr14:2,328,690...2,371,913
Ensembl chr14:2,328,750...2,371,883
JBrowse link
G Rho rhodopsin ISO MGI:2181812 (MGI:2155023|PMID:11747369) RGD PMID:11747369 MGI:2155023 NCBI chr 4:147,832,136...147,837,298
Ensembl chr 4:147,832,136...147,837,298
JBrowse link
detection of light stimulus involved in visual perception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp8a2 ATPase phospholipid transporting 8A2 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr15:39,955,689...40,488,737
Ensembl chr15:40,000,322...40,428,800
JBrowse link
G Best1 bestrophin 1 ISO MGI:3795281 (MGI:3795256|PMID:16636205) RGD PMID:16636205 MGI:3795256 NCBI chr 1:226,033,146...226,049,893
Ensembl chr 1:226,030,875...226,049,929
JBrowse link
G Cacna1f calcium voltage-gated channel subunit alpha1 F ISO (PMID:7571473) RGD PMID:7571473 NCBI chr  X:15,712,709...15,741,135
Ensembl chr  X:15,712,713...15,741,103
JBrowse link
G Cacna2d4 calcium voltage-gated channel auxiliary subunit alpha2delta 4 ISO (PMID:17033974) RGD PMID:17033974 NCBI chr 4:151,298,548...151,409,263
Ensembl chr 4:151,298,548...151,409,263
JBrowse link
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 ISO MGI:1856936 (MGI:3795256|PMID:16636205) RGD PMID:16636205 MGI:3795256 NCBI chr 3:37,950,846...38,211,478
Ensembl chr 3:37,955,069...38,090,526
JBrowse link
G Ccdc66 coiled-coil domain containing 66 ISO (MGI:5141557|PMID:21680557) RGD PMID:21680557 MGI:5141557 NCBI chr16:3,107,119...3,139,188
Ensembl chr16:3,110,239...3,139,177
JBrowse link
G Cep250 centrosomal protein 250 ISO (MGI:6317055|PMID:30998843) RGD PMID:30998843 MGI:6317055 NCBI chr 3:151,508,366...151,544,631
Ensembl chr 3:151,508,361...151,544,674
JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 ISO (PMID:15557452) RGD PMID:15557452 NCBI chr19:10,142,440...10,206,618
Ensembl chr19:10,142,496...10,206,681
JBrowse link
G Crb1 crumbs cell polarity complex component 1 ISO (MGI:5315300|PMID:22447858) RGD PMID:22447858 MGI:5315300 NCBI chr13:56,270,519...56,462,893
Ensembl chr13:56,270,781...56,462,834
JBrowse link
G Gja10 gap junction protein, alpha 10 ISO MGI:3043946 (MGI:3654563|PMID:16820008) RGD PMID:16820008 MGI:3654563 NCBI chr 5:47,819,484...47,841,138
Ensembl chr 5:47,835,066...47,836,586
JBrowse link
G Gnat1 G protein subunit alpha transducin 1 ISO (PMID:17584859)
MGI:2152779 (MGI:3772743|PMID:18171936)
RGD PMID:17584859, PMID:18171936 MGI:3772743 NCBI chr 8:116,433,302...116,438,038
Ensembl chr 8:116,433,302...116,438,038
JBrowse link
G Gnat2 G protein subunit alpha transducin 2 ISO (PMID:12077706)
MGI:3588845 (MGI:3714271|PMID:17065522)
RGD PMID:12077706, PMID:17065522 MGI:3714271 NCBI chr 2:210,880,754...210,890,765
Ensembl chr 2:210,880,777...210,889,881
JBrowse link
G Grm6 glutamate metabotropic receptor 6 ISO
ISS
(PMID:17405131)
GO_REF:0000024
RGD
UniProt
PMID:17405131 GO_REF:0000024 NCBI chr10:36,345,503...36,363,416
Ensembl chr10:36,345,939...36,360,665
JBrowse link
G Gucy2f guanylate cyclase 2F ISO (MGI:3708225|PMID:17255100) RGD PMID:17255100 MGI:3708225 NCBI chr  X:113,372,240...113,474,210
Ensembl chr  X:113,372,240...113,474,164
JBrowse link
G Prph2 peripherin 2 ISO MGI:1856523|MGI:6367783|MGI:6367794|MGI:97998 (MGI:5905515|PMID:28053051), (MGI:6305433|PMID:26420485) RGD PMID:26420485, PMID:28053051 MGI:5905515, MGI:6305433 NCBI chr 9:16,085,933...16,386,176 JBrowse link
G Rbp4 retinol binding protein 4 ISO MGI:2445721 (MGI:3687059|PMID:12484775) RGD PMID:12484775 MGI:3687059 NCBI chr 1:256,806,476...256,813,678
Ensembl chr 1:256,806,472...256,813,711
JBrowse link
G Reep6 receptor accessory protein 6 ISO
ISS
(PMID:27889058)
GO_REF:0000024
RGD
UniProt
PMID:27889058 GO_REF:0000024 NCBI chr 7:12,240,059...12,246,814
Ensembl chr 7:12,240,060...12,246,729
JBrowse link
G Rgs9bp regulator of G protein signaling 9 binding protein ISO MGI:3028628 (MGI:3027216|PMID:14625292) RGD PMID:14625292 MGI:3027216 NCBI chr 1:91,855,270...91,855,983
Ensembl chr 1:91,855,270...91,855,983
JBrowse link
G Rom1 retinal outer segment membrane protein 1 ISO MGI:102791 (MGI:5905515|PMID:28053051) RGD PMID:28053051 MGI:5905515 NCBI chr 1:225,126,732...225,128,740
Ensembl chr 1:225,126,734...225,128,740
JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 ISO (PMID:15557452) RGD PMID:15557452 NCBI chr 2:266,141,581...266,169,197
Ensembl chr 2:266,141,581...266,169,197
JBrowse link
G Rpgrip1 RPGR interacting protein 1 ISO (PMID:21521437) RGD PMID:21521437 NCBI chr15:28,521,287...28,575,046
Ensembl chr15:28,522,737...28,574,737
JBrowse link
G Sema5a semaphorin 5A ISO MGI:107555 (MGI:5140622|PMID:21835343) RGD PMID:21835343 MGI:5140622 NCBI chr 2:85,377,318...85,808,970
Ensembl chr 2:85,377,318...85,808,970
JBrowse link
G Sema5b semaphorin 5B ISO MGI:107556 (MGI:5140622|PMID:21835343) RGD PMID:21835343 MGI:5140622 NCBI chr11:68,304,844...68,435,109
Ensembl chr11:68,306,659...68,349,238
JBrowse link
G Tulp1 TUB like protein 1 ISO (PMID:15557452) RGD PMID:15557452 NCBI chr20:7,931,673...7,943,601
Ensembl chr20:7,931,674...7,943,575
JBrowse link
detection of UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fech ferrochelatase ISO MGI:2384729 (MGI:2384247|PMID:12149233) RGD PMID:12149233 MGI:2384247 NCBI chr18:59,941,992...59,975,192
Ensembl chr18:59,941,992...59,975,192
JBrowse link
detection of visible light term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpr88 G-protein coupled receptor 88 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:219,258,346...219,263,819
Ensembl chr 2:219,258,347...219,262,901
JBrowse link
G Irx6 iroquois homeobox 6 ISO MGI:5448232 (MGI:5447580|PMID:23172916) RGD PMID:23172916 MGI:5447580 NCBI chr19:15,726,633...15,733,442
Ensembl chr19:15,727,514...15,733,412
JBrowse link
G Opn1mw opsin 1, medium wave sensitive IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:156,569,683...156,589,907
Ensembl chr  X:156,569,683...156,589,907
JBrowse link
G Opn1sw opsin 1, short wave sensitive IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:56,653,840...56,656,980
Ensembl chr 4:56,653,844...56,656,980
JBrowse link
G Opn3 opsin 3 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:93,716,481...93,746,994
Ensembl chr13:93,716,481...93,746,994
JBrowse link
G Opn5 opsin 5 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:21,045,457...21,092,517
Ensembl chr 9:21,045,457...21,093,172
JBrowse link
G Rgr retinal G protein coupled receptor IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr16:14,286,323...14,300,972
Ensembl chr16:14,286,323...14,300,951
JBrowse link
G Rrh retinal pigment epithelium derived rhodopsin homolog IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:235,237,422...235,250,474
Ensembl chr 2:235,237,414...235,249,575
JBrowse link
DNA synthesis involved in UV-damage excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pola1 DNA polymerase alpha 1, catalytic subunit NOT ISS
ISO
GO_REF:0000024
(PMID:1730053)
UniProt
RGD
PMID:1730053 GO_REF:0000024 NCBI chr  X:62,382,604...62,698,830
Ensembl chr  X:62,382,608...62,698,830
JBrowse link
G Pold3 DNA polymerase delta 3, accessory subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:165,085,142...165,122,385
Ensembl chr 1:165,083,622...165,123,455
JBrowse link
G Trex1 three prime repair exonuclease 1 ISO MGI:3052754 (MGI:5562498|PMID:23993650) RGD PMID:23993650 MGI:5562498 NCBI chr 8:117,796,127...117,797,427
Ensembl chr 8:117,796,128...117,797,427
JBrowse link
entrainment of circadian clock by photoperiod term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aanat aralkylamine N-acetyltransferase TAS RGD PMID:8770929 RGD:1298540 NCBI chr10:105,568,091...105,572,407
Ensembl chr10:105,568,091...105,572,403
JBrowse link
G Atoh7 atonal bHLH transcription factor 7 ISO (MGI:5699646|PMID:26392540) RGD PMID:26392540 MGI:5699646 NCBI chr20:27,082,961...27,083,410
Ensembl chr20:27,082,961...27,083,410
JBrowse link
G Bhlhe40 basic helix-loop-helix family, member e40 IEA
ISO
GO_REF:0000107
(MGI:3798698|PMID:18411297)
Ensembl
RGD
PMID:18411297 GO_REF:0000107, MGI:3798698 NCBI chr 4:140,703,619...140,709,319
Ensembl chr 4:140,703,619...140,709,319
JBrowse link
G Crtc1 CREB regulated transcription coactivator 1 ISS
ISO
GO_REF:0000024
(MGI:5532783|PMID:23993098)
UniProt
RGD
PMID:23993098 GO_REF:0000024, MGI:5532783 NCBI chr16:20,740,746...20,798,145
Ensembl chr16:20,740,826...20,794,039
JBrowse link
G Cry1 cryptochrome circadian regulator 1 ISS
ISO
IBA
GO_REF:0000024
(MGI:5490394|PMID:23616524)
PMID:21873635
UniProt
RGD
PMID:23616524, PMID:21873635 GO_REF:0000024, MGI:5490394, RGD:13792537 NCBI chr 7:24,534,593...24,634,098
Ensembl chr 7:24,534,615...24,634,097
JBrowse link
G Cry2 cryptochrome circadian regulator 2 IEA
ISO
IBA
ISS
GO_REF:0000107
(MGI:5490394|PMID:23616524)
PMID:21873635
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:23616524, PMID:21873635 GO_REF:0000024, GO_REF:0000107, MGI:5490394, RGD:13792537 NCBI chr 3:81,314,151...81,344,143
Ensembl chr 3:81,314,149...81,344,110
JBrowse link
G Fbxl12 F-box and leucine-rich repeat protein 12 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:21,656,636...21,662,755
Ensembl chr 8:21,656,639...21,661,259
JBrowse link
G Fbxl21 F-box and leucine-rich repeat protein 21 IBA
ISO
PMID:21873635
(MGI:5470183|PMID:23452855), (MGI:5487698|PMID:23452856)
RGD PMID:23452855, PMID:23452856, PMID:21873635 MGI:5470183, MGI:5487698, RGD:13792537 NCBI chr17:8,505,771...8,520,208
Ensembl chr17:8,505,996...8,520,147
JBrowse link
G Fbxl22 F-box and leucine-rich repeat protein 22 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:72,198,043...72,204,730
Ensembl chr 8:72,198,043...72,204,730
JBrowse link
G Fbxl3 F-box and leucine-rich repeat protein 3 IBA
ISO
PMID:21873635
(MGI:5470183|PMID:23452855), (MGI:5487698|PMID:23452856), (MGI:5490394|PMID:23616524)
RGD PMID:23452855, PMID:23452856, PMID:23616524, PMID:21873635 MGI:5470183, MGI:5487698, MGI:5490394, RGD:13792537 NCBI chr15:93,647,307...93,667,395
Ensembl chr15:93,647,310...93,667,395
JBrowse link
G Fbxl6 F-box and leucine-rich repeat protein 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:117,602,056...117,604,954
Ensembl chr 7:117,602,041...117,605,141
JBrowse link
G Fbxl8 F-box and leucine-rich repeat protein 8 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:37,216,696...37,225,701
Ensembl chr19:37,221,132...37,226,065
JBrowse link
G Id2 inhibitor of DNA binding 2 ISS
ISO
GO_REF:0000024
(MGI:3838062|PMID:19217292)
UniProt
RGD
PMID:19217292 GO_REF:0000024, MGI:3838062 NCBI chr 6:44,360,077...44,361,908
Ensembl chr 6:44,348,501...44,363,915
JBrowse link
G Mta1 metastasis associated 1 ISS
ISO
GO_REF:0000024
(MGI:5582861|PMID:24089055)
UniProt
RGD
PMID:24089055 GO_REF:0000024, MGI:5582861 NCBI chr 6:137,911,302...137,950,066
Ensembl chr 6:137,924,293...137,950,075
JBrowse link
G Nr2f6 nuclear receptor subfamily 2, group F, member 6 IEA
ISO
GO_REF:0000107
MGI:3574037 (MGI:3530176|PMID:15741322)
Ensembl
RGD
PMID:15741322 GO_REF:0000107, MGI:3530176 NCBI chr16:19,769,968...19,777,414
Ensembl chr16:19,769,968...19,777,414
JBrowse link
G Opn4 opsin 4 ISO (MGI:5925970|PMID:26320947) RGD PMID:26320947 MGI:5925970 NCBI chr16:10,943,353...10,966,602
Ensembl chr16:10,943,341...10,952,549
JBrowse link
G Opn5 opsin 5 ISO (MGI:5699646|PMID:26392540), (MGI:6376341|PMID:31607531), (MGI:6378274|PMID:30240620) RGD PMID:26392540, PMID:30240620, PMID:31607531 MGI:5699646, MGI:6376341, MGI:6378274 NCBI chr 9:21,045,457...21,092,517
Ensembl chr 9:21,045,457...21,093,172
JBrowse link
G Pde6b phosphodiesterase 6B ISO (MGI:6378274|PMID:30240620) RGD PMID:30240620 MGI:6378274 NCBI chr14:2,328,690...2,371,913
Ensembl chr14:2,328,750...2,371,883
JBrowse link
G Per1 period circadian regulator 1 IEA
ISO
IBA
ISS
GO_REF:0000107
(MGI:3578039|PMID:15888647)
PMID:21873635
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:15888647, PMID:21873635 GO_REF:0000024, GO_REF:0000107, MGI:3578039, RGD:13792537 NCBI chr10:55,681,761...55,696,557
Ensembl chr10:55,687,050...55,695,994
JBrowse link
G Per2 period circadian regulator 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:98,555,154...98,597,362
Ensembl chr 9:98,555,169...98,597,359
JBrowse link
G Per3 period circadian regulator 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:168,088,126...168,123,482
Ensembl chr 5:168,086,998...168,123,395
JBrowse link
G Pml PML nuclear body scaffold ISO (MGI:5314433|PMID:22274616) RGD PMID:22274616 MGI:5314433 NCBI chr 8:63,002,515...63,034,310
Ensembl chr 8:63,004,870...63,034,226
JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha ISS
ISO
GO_REF:0000024
(MGI:5086036|PMID:21712997)
UniProt
RGD
PMID:21712997 GO_REF:0000024, MGI:5086036 NCBI chr 1:219,439,953...219,443,570
Ensembl chr 1:219,439,953...219,443,570
JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta ISS
ISO
GO_REF:0000024
(MGI:5086036|PMID:21712997)
UniProt
RGD
PMID:21712997 GO_REF:0000024, MGI:5086036 NCBI chr 6:23,548,507...23,581,136
Ensembl chr 6:23,549,317...23,581,052
JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma ISS
ISO
GO_REF:0000024
(MGI:5086036|PMID:21712997)
UniProt
RGD
PMID:21712997 GO_REF:0000024, MGI:5086036 NCBI chr12:39,864,302...39,882,030
Ensembl chr12:39,864,295...39,882,030
JBrowse link
G Rbm4 RNA binding motif protein 4 ISO (MGI:3703208|PMID:17264215) RGD PMID:17264215 MGI:3703208 NCBI chr 1:220,038,403...220,049,756
Ensembl chr 1:220,039,734...220,048,966
JBrowse link
G Rbm4b RNA binding motif protein 4B ISS
ISO
GO_REF:0000024
(MGI:3703208|PMID:17264215)
UniProt
RGD
PMID:17264215 GO_REF:0000024, MGI:3703208 NCBI chr 1:220,009,397...220,019,488
Ensembl chr 1:220,009,397...220,019,486
JBrowse link
G Sik1 salt-inducible kinase 1 ISS
ISO
GO_REF:0000024
(MGI:5532783|PMID:23993098)
UniProt
RGD
PMID:23993098 GO_REF:0000024, MGI:5532783 NCBI chr20:10,670,747...10,680,279
Ensembl chr20:10,668,411...10,680,283
JBrowse link
G Tp53 tumor protein p53 ISS
ISO
GO_REF:0000024
(MGI:5613453|PMID:24051492)
UniProt
RGD
PMID:24051492 GO_REF:0000024, MGI:5613453 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
G Usp2 ubiquitin specific peptidase 2 ISS
ISO
GO_REF:0000024
(MGI:5607210|PMID:23213472)
UniProt
RGD
PMID:23213472 GO_REF:0000024, MGI:5607210 NCBI chr 8:48,403,985...48,432,525
Ensembl chr 8:48,406,260...48,430,885
JBrowse link
long-day photoperiodism term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agrp agouti related neuropeptide IEP RGD PMID:19490367 RGD:6480663 NCBI chr19:37,525,941...37,584,875
Ensembl chr19:37,526,419...37,528,011
JBrowse link
negative regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nedd4 NEDD4 E3 ubiquitin protein ligase ISO (PMID:17996703) RGD PMID:17996703 NCBI chr 8:79,323,408...79,408,842
Ensembl chr 8:79,323,408...79,408,833
JBrowse link
optokinetic behavior term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa1 homeobox A1 ISO (PMID:16155570) RGD PMID:16155570 NCBI chr 4:82,124,358...82,127,182
Ensembl chr 4:82,125,406...82,127,066
JBrowse link
G Opn4 opsin 4 ISS
ISO
GO_REF:0000024
(MGI:5699646|PMID:26392540)
UniProt
RGD
PMID:26392540 GO_REF:0000024, MGI:5699646 NCBI chr16:10,943,353...10,966,602
Ensembl chr16:10,943,341...10,952,549
JBrowse link
photoperiodism term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aanat aralkylamine N-acetyltransferase IDA RGD PMID:12358739 RGD:628397 NCBI chr10:105,568,091...105,572,407
Ensembl chr10:105,568,091...105,572,403
JBrowse link
G Drd4 dopamine receptor D4 IEP RGD PMID:18321474 RGD:2301031 NCBI chr 1:214,278,296...214,282,818
Ensembl chr 1:214,278,296...214,281,483
JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit IEP RGD PMID:16962714 RGD:2293767 NCBI chr 6:25,598,936...25,616,995
Ensembl chr 6:25,598,936...25,616,995
JBrowse link
G Nmu neuromedin U IEP RGD PMID:17726140 RGD:1642120 NCBI chr14:34,353,683...34,381,968
Ensembl chr14:34,354,503...34,381,828
JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 IEP RGD PMID:21076970 RGD:10448986 NCBI chr10:86,683,875...86,690,815
Ensembl chr10:86,683,875...86,690,815
JBrowse link
phototransduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arrb1 arrestin, beta 1 ISO MGI:2388373 (MGI:3772638|PMID:11853756) RGD PMID:11853756 MGI:3772638 NCBI chr 1:164,502,099...164,573,947
Ensembl chr 1:164,502,389...164,593,139
JBrowse link
G Asic2 acid sensing ion channel subunit 2 IEA
ISO
GO_REF:0000107
MGI:3043849 (MGI:3042539|PMID:14762118)
Ensembl
RGD
PMID:14762118 GO_REF:0000107, MGI:3042539 NCBI chr10:68,247,800...69,347,223
Ensembl chr10:68,248,655...68,517,564
JBrowse link
G Cabp4 calcium binding protein 4 ISO MGI:3056615 (MGI:3609280|PMID:16249514) RGD PMID:16249514 MGI:3609280 NCBI chr 1:219,383,452...219,388,009
Ensembl chr 1:219,383,452...219,388,009
JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 ISO MGI:3527896 (MGI:3527312|PMID:15634774) RGD PMID:15634774 MGI:3527312 NCBI chr19:10,142,440...10,206,618
Ensembl chr19:10,142,496...10,206,681
JBrowse link
G Gnat1 G protein subunit alpha transducin 1 ISO MGI:2152779 (MGI:1928441|PMID:11095744), (MGI:3609280|PMID:16249514), (MGI:3615719|PMID:15073279), (MGI:3757777|PMID:17881533), (MGI:3772638|PMID:11853756), (MGI:3778702|PMID:18367617) RGD PMID:11095744, PMID:11853756, PMID:15073279, PMID:16249514, PMID:17881533, PMID:18367617 MGI:1928441, MGI:3609280, MGI:3615719, MGI:3757777, MGI:3772638, MGI:3778702 NCBI chr 8:116,433,302...116,438,038
Ensembl chr 8:116,433,302...116,438,038
JBrowse link
G Gnat2 G protein subunit alpha transducin 2 ISO MGI:3588845 (MGI:3761397|PMID:17408617), (MGI:3772743|PMID:18171936) RGD PMID:17408617, PMID:18171936 MGI:3761397, MGI:3772743 NCBI chr 2:210,880,754...210,890,765
Ensembl chr 2:210,880,777...210,889,881
JBrowse link
G Gngt1 G protein subunit gamma transducin 1 ISO MGI:3783323 (MGI:3778702|PMID:18367617) RGD PMID:18367617 MGI:3778702 NCBI chr 4:28,972,339...28,975,419
Ensembl chr 4:28,972,434...28,975,419
JBrowse link
G Gpr88 G-protein coupled receptor 88 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:219,258,346...219,263,819
Ensembl chr 2:219,258,347...219,262,901
JBrowse link
G Guca1a guanylate cyclase activator 1A ISO MGI:2664159 (MGI:2664110|PMID:11493703), (MGI:3584028|PMID:15173221) RGD PMID:11493703, PMID:15173221 MGI:2664110, MGI:3584028 NCBI chr 9:15,609,804...15,620,030
Ensembl chr 9:15,609,804...15,620,029
JBrowse link
G Guca1b guanylate cyclase activator 1B ISO MGI:2664160 (MGI:2664110|PMID:11493703), (MGI:3584028|PMID:15173221) RGD PMID:11493703, PMID:15173221 MGI:2664110, MGI:3584028 NCBI chr 9:15,621,083...15,629,017
Ensembl chr 9:15,621,083...15,629,017
JBrowse link
G Opn1mw opsin 1, medium wave sensitive IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:156,569,683...156,589,907
Ensembl chr  X:156,569,683...156,589,907
JBrowse link
G Opn1sw opsin 1, short wave sensitive IEA
IBA
GO_REF:0000043
PMID:21873635
UniProt PMID:21873635 GO_REF:0000043, RGD:13792537 NCBI chr 4:56,653,840...56,656,980
Ensembl chr 4:56,653,844...56,656,980
JBrowse link
G Opn3 opsin 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:93,716,481...93,746,994
Ensembl chr13:93,716,481...93,746,994
JBrowse link
G Opn4 opsin 4 IDA
ISO
IBA
(MGI:2667269|PMID:12808468)
PMID:21873635
(PMID:15674244)
RGD PMID:12808468, PMID:15674244, PMID:11834834, PMID:21873635 MGI:2667269, RGD:633348, RGD:13792537 NCBI chr16:10,943,353...10,966,602
Ensembl chr16:10,943,341...10,952,549
JBrowse link
G Opn5 opsin 5 IBA
ISO
PMID:21873635
(MGI:6359287|PMID:30936473)
RGD PMID:30936473, PMID:21873635 MGI:6359287, RGD:13792537 NCBI chr 9:21,045,457...21,092,517
Ensembl chr 9:21,045,457...21,093,172
JBrowse link
G Plcb4 phospholipase C, beta 4 NAS RGD PMID:7688223 RGD:633574 NCBI chr 3:128,601,163...128,971,720
Ensembl chr 3:128,756,799...128,971,746
JBrowse link
G Rcvrn recoverin ISO MGI:3584102 (MGI:3584028|PMID:15173221) RGD PMID:15173221 MGI:3584028 NCBI chr10:54,246,250...54,253,996
Ensembl chr10:54,246,250...54,253,996
JBrowse link
G Rgr retinal G protein coupled receptor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:14,286,323...14,300,972
Ensembl chr16:14,286,323...14,300,951
JBrowse link
G Rho rhodopsin IEA
ISO
IBA
GO_REF:0000107
MGI:2181812 (MGI:3655007|PMID:16723493)
PMID:21873635
Ensembl
RGD
PMID:16723493, PMID:21873635 GO_REF:0000107, MGI:3655007, RGD:13792537 NCBI chr 4:147,832,136...147,837,298
Ensembl chr 4:147,832,136...147,837,298
JBrowse link
G Rrh retinal pigment epithelium derived rhodopsin homolog IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:235,237,422...235,250,474
Ensembl chr 2:235,237,414...235,249,575
JBrowse link
phototransduction, UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Opn5 opsin 5 ISO (PMID:22043319)
(MGI:6230806|PMID:22043319)
RGD PMID:22043319 MGI:6230806 NCBI chr 9:21,045,457...21,092,517
Ensembl chr 9:21,045,457...21,093,172
JBrowse link
phototransduction, visible light term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aipl1 aryl hydrocarbon receptor-interacting protein-like 1 ISO MGI:3054784 (MGI:3054118|PMID:15365173) RGD PMID:15365173 MGI:3054118 NCBI chr10:58,599,690...58,631,194
Ensembl chr10:58,599,856...58,608,907
JBrowse link
G Chrm1 cholinergic receptor, muscarinic 1 ISO (PMID:12196552) RGD PMID:12196552 NCBI chr 1:224,869,087...224,885,101
Ensembl chr 1:224,882,439...224,884,205
JBrowse link
G Gnat1 G protein subunit alpha transducin 1 ISO (PMID:17584859) RGD PMID:17584859 NCBI chr 8:116,433,302...116,438,038
Ensembl chr 8:116,433,302...116,438,038
JBrowse link
G Pde6c phosphodiesterase 6C ISO MGI:2657247 (MGI:3655007|PMID:16723493) RGD PMID:16723493 MGI:3655007 NCBI chr 1:256,822,099...256,885,879
Ensembl chr 1:256,822,334...256,877,810
JBrowse link
red, far-red light phototransduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rho rhodopsin IDA RGD PMID:2525480 RGD:6893558 NCBI chr 4:147,832,136...147,837,298
Ensembl chr 4:147,832,136...147,837,298
JBrowse link
regulation of mRNA stability involved in cellular response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Npm1 nucleophosmin 1 ISO (PMID:12080348) RGD PMID:12080348 NCBI chr10:18,080,949...18,091,062
Ensembl chr10:18,080,950...18,090,950
JBrowse link
regulation of rhodopsin mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aipl1 aryl hydrocarbon receptor-interacting protein-like 1 ISO MGI:3054784|MGI:3054793 (MGI:3054118|PMID:15365173), (MGI:3054134|PMID:15365178) RGD PMID:15365173, PMID:15365178 MGI:3054118, MGI:3054134 NCBI chr10:58,599,690...58,631,194
Ensembl chr10:58,599,856...58,608,907
JBrowse link
G Grk1 G protein-coupled receptor kinase 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:15946941)
Ensembl
UniProt
RGD
PMID:15946941 GO_REF:0000024, GO_REF:0000107 NCBI chr16:81,153,489...81,165,442
Ensembl chr16:81,153,489...81,165,442
JBrowse link
regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chek1 checkpoint kinase 1 ISS
ISO
GO_REF:0000024
(MGI:5294291|PMID:18243098)
UniProt
RGD
PMID:18243098 GO_REF:0000024, MGI:5294291 NCBI chr 8:39,181,162...39,201,588
Ensembl chr 8:39,181,163...39,243,882
JBrowse link
regulation of translation involved in cellular response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rpl26 ribosomal protein L26 ISO (PMID:16213212) RGD PMID:16213212 NCBI chr10:55,492,417...55,495,547
Ensembl chr10:55,492,404...55,496,012
JBrowse link
response to blue light term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpt1b carnitine palmitoyltransferase 1B ISS
ISO
GO_REF:0000024
(MGI:6392469|PMID:32040503)
UniProt
RGD
PMID:32040503 GO_REF:0000024, MGI:6392469 NCBI chr 7:130,395,211...130,404,731
Ensembl chr 7:130,395,194...130,405,347
JBrowse link
G Dct dopachrome tautomerase ISO (PMID:28842328) RGD PMID:28842328 NCBI chr15:103,208,174...103,245,033
Ensembl chr15:103,208,258...103,244,494
JBrowse link
G Kcnj10 potassium inwardly-rectifying channel, subfamily J, member 10 IEP RGD PMID:18450590 RGD:2326038 NCBI chr13:90,722,945...90,753,338
Ensembl chr13:90,723,092...90,752,581
JBrowse link
G Opn3 opsin 3 ISO
IEA
(PMID:28842328), (PMID:30168605)
(MGI:6392469|PMID:32040503)
GO_REF:0000107
RGD
Ensembl
PMID:28842328, PMID:30168605, PMID:32040503 GO_REF:0000107, MGI:6392469 NCBI chr13:93,716,481...93,746,994
Ensembl chr13:93,716,481...93,746,994
JBrowse link
G Tyr tyrosinase ISO
IEA
(PMID:28842328)
GO_REF:0000107
RGD
Ensembl
PMID:28842328 GO_REF:0000107 NCBI chr 1:151,012,598...151,106,802
Ensembl chr 1:151,012,598...151,106,802
JBrowse link
response to high light intensity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mmp9 matrix metallopeptidase 9 IEP RGD PMID:17854381 RGD:8547925 NCBI chr 3:161,413,410...161,421,473
Ensembl chr 3:161,413,298...161,421,520
JBrowse link
G Rdh13 retinol dehydrogenase 13 ISO MGI:5467544 (MGI:5462166|PMID:22605914) RGD PMID:22605914 MGI:5462166 NCBI chr 1:72,956,017...72,983,811
Ensembl chr 1:72,956,026...72,984,350
JBrowse link
response to light intensity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdnf brain-derived neurotrophic factor IEP RGD PMID:21076359 RGD:8655612 NCBI chr 3:100,768,637...100,819,216
Ensembl chr 3:100,768,637...100,819,210
JBrowse link
G Cat catalase IEP RGD PMID:17514533 RGD:9107626 NCBI chr 3:93,379,872...93,412,058
Ensembl chr 3:93,379,874...93,412,058
JBrowse link
G Cntf ciliary neurotrophic factor IEP RGD PMID:21076359 RGD:8655612 NCBI chr 1:229,599,009...229,601,032
Ensembl chr 1:229,599,009...229,601,032
JBrowse link
G Ext1 exostosin glycosyltransferase 1 ISO (MGI:5315031|PMID:22411800) RGD PMID:22411800 MGI:5315031 NCBI chr 7:92,605,008...92,881,392
Ensembl chr 7:92,605,728...92,882,068
JBrowse link
G Gnat1 G protein subunit alpha transducin 1 IDA RGD PMID:11931744 RGD:1599009 NCBI chr 8:116,433,302...116,438,038
Ensembl chr 8:116,433,302...116,438,038
JBrowse link
G Gnat2 G protein subunit alpha transducin 2 IDA RGD PMID:17591908 RGD:2302146 NCBI chr 2:210,880,754...210,890,765
Ensembl chr 2:210,880,777...210,889,881
JBrowse link
G Kcnc1 potassium voltage-gated channel subfamily C member 1 IEP RGD PMID:18708127 RGD:9685740 NCBI chr 1:102,414,352...102,456,718
Ensembl chr 1:102,414,625...102,456,411
JBrowse link
G Kcnc2 potassium voltage-gated channel subfamily C member 2 IEP RGD PMID:18708127 RGD:9685740 NCBI chr 7:54,978,453...55,159,362
Ensembl chr 7:54,980,120...55,159,351
JBrowse link
G Mt-nd3 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 3 IEP RGD PMID:15277468 RGD:2302310 NCBI chr MT:9,451...9,798
Ensembl chr MT:9,451...9,798
JBrowse link
response to low light intensity stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmgcs1 3-hydroxy-3-methylglutaryl-CoA synthase 1 IEP RGD PMID:1683769 RGD:2326143 NCBI chr 2:52,427,351...52,445,082
Ensembl chr 2:52,431,601...52,445,055
JBrowse link
G Prph2 peripherin 2 IEP RGD PMID:8320859 RGD:8553226 NCBI chr 9:16,085,933...16,386,176 JBrowse link
response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brsk1 BR serine/threonine kinase 1 ISO (PMID:15150265) RGD PMID:15150265 NCBI chr 1:72,701,281...72,727,061
Ensembl chr 1:72,701,610...72,727,112
JBrowse link
G Brsk2 BR serine/threonine kinase 2 ISS PMID:15150265 UniProt PMID:15150265 RGD:8554801 NCBI chr 1:214,918,757...214,940,883
Ensembl chr 1:214,927,172...214,947,624
JBrowse link
G Casp3 caspase 3 ISO MGI:109383 (MGI:3615714|PMID:16469926), (MGI:3691523|PMID:11092819) RGD PMID:11092819, PMID:16469926 MGI:3615714, MGI:3691523 NCBI chr16:48,845,011...48,863,249
Ensembl chr16:48,845,012...48,863,204
JBrowse link
G Casp7 caspase 7 ISO MGI:107739 (MGI:3615714|PMID:16469926) RGD PMID:16469926 MGI:3615714 NCBI chr 1:277,190,557...277,242,779
Ensembl chr 1:277,190,964...277,242,774
JBrowse link
G Casp9 caspase 9 ISO MGI:2158755 (MGI:3691523|PMID:11092819) RGD PMID:11092819 MGI:3691523 NCBI chr 5:160,356,211...160,373,774
Ensembl chr 5:160,355,833...160,373,778
JBrowse link
G Cat catalase IEP RGD PMID:12592055 RGD:9179775 NCBI chr 3:93,379,872...93,412,058
Ensembl chr 3:93,379,874...93,412,058
JBrowse link
G Ccar2 cell cycle and apoptosis regulator 2 ISO (PMID:23352644) RGD PMID:23352644 NCBI chr15:51,818,887...51,834,443
Ensembl chr15:51,818,897...51,834,030
JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A ISO MGI:1933751 (MGI:2675761|PMID:12952892) RGD PMID:12952892 MGI:2675761 NCBI chr20:6,348,422...6,358,864
Ensembl chr20:6,351,458...6,358,864
JBrowse link
G Cirbp cold inducible RNA binding protein ISO
ISS
(PMID:11574538)
GO_REF:0000024
RGD
UniProt
PMID:11574538 GO_REF:0000024 NCBI chr 7:12,400,066...12,405,054
Ensembl chr 7:12,401,207...12,405,022
JBrowse link
G Ddb2 damage specific DNA binding protein 2 ISO
IBA
(PMID:12732143)
PMID:21873635
RGD PMID:12732143, PMID:21873635 RGD:13792537 NCBI chr 3:80,030,437...80,052,984
Ensembl chr 3:80,030,437...80,052,953
JBrowse link
G Dtl denticleless E3 ubiquitin protein ligase homolog ISO (PMID:18794347) RGD PMID:18794347 NCBI chr13:110,219,276...110,257,345
Ensembl chr13:110,220,283...110,257,367
JBrowse link
G Elane elastase, neutrophil expressed ISO (PMID:11928814) RGD PMID:11928814 NCBI chr 7:12,638,320...12,640,168
Ensembl chr 7:12,638,322...12,640,232
JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit IBA
ISO
PMID:21873635
MGI:2183949 (MGI:3692802|PMID:17020410)
RGD PMID:17020410, PMID:21873635 MGI:3692802, RGD:13792537 NCBI chr 1:80,293,574...80,307,334
Ensembl chr 1:80,293,566...80,307,344
JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit ISO
IBA
(PMID:17509950)
PMID:21873635
RGD PMID:17509950, PMID:21873635 RGD:13792537 NCBI chr18:25,037,668...25,068,380
Ensembl chr18:25,037,625...25,068,389
JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit ISO (PMID:16678501) RGD PMID:16678501 NCBI chr10:2,010,140...2,037,953
Ensembl chr10:2,010,648...2,037,891
JBrowse link
G Ercc5 ERCC excision repair 5, endonuclease ISO (PMID:16167068), (PMID:8710877)
MGI:3043589 (MGI:3041918|PMID:15082767)
RGD PMID:8710877, PMID:15082767, PMID:16167068 MGI:3041918 NCBI chr 9:50,928,847...50,970,962
Ensembl chr 9:50,925,619...50,970,955
JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor ISO (PMID:16916636)
MGI:1932102 (MGI:3054497|PMID:15340056), (MGI:3655576|PMID:10843671)
RGD PMID:10843671, PMID:15340056, PMID:16916636 MGI:3054497, MGI:3655576 NCBI chr16:8,734,028...8,804,610
Ensembl chr16:8,734,035...8,804,610
JBrowse link
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit ISO (PMID:12732143), (PMID:7664335)
MGI:2449180 (MGI:3054497|PMID:15340056)
RGD PMID:7664335, PMID:12732143, PMID:15340056 MGI:3054497 NCBI chr 2:39,434,617...39,473,392
Ensembl chr 2:39,434,634...39,472,017
JBrowse link
G Hus1 HUS1 checkpoint clamp component ISO MGI:1927769 (MGI:2156961|PMID:11790307), (MGI:2449744|PMID:12529385) RGD PMID:11790307, PMID:12529385 MGI:2156961, MGI:2449744 NCBI chr14:89,194,086...89,208,825
Ensembl chr14:89,194,092...89,208,825
JBrowse link
G LOC100302465 hypothetical LOC100302465 ISO (MGI:5285148|PMID:20843368) RGD PMID:20843368 MGI:5285148 NCBI chr 1:206,324,763...206,417,143
Ensembl chr 1:206,324,765...206,417,143
JBrowse link
G Map2k7 mitogen activated protein kinase kinase 7 IEA
ISO
GO_REF:0000107
(PMID:9535930)
Ensembl
RGD
PMID:9535930 GO_REF:0000107 NCBI chr12:2,546,278...2,555,310
Ensembl chr12:2,548,218...2,555,164
JBrowse link
G Map4k3 mitogen-activated protein kinase kinase kinase kinase 3 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:9275185)
Ensembl
UniProt
RGD
PMID:9275185 GO_REF:0000024, GO_REF:0000107 NCBI chr 6:3,276,732...3,444,519
Ensembl chr 6:3,276,738...3,444,519
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 ISO
IEA
(PMID:14967141)
GO_REF:0000107
RGD
Ensembl
PMID:14967141 GO_REF:0000107 NCBI chr16:9,620,854...9,709,342
Ensembl chr16:9,625,177...9,709,347
JBrowse link
G Men1 menin 1 ISO (PMID:16690369) RGD PMID:16690369 NCBI chr 1:221,704,394...221,710,343
Ensembl chr 1:221,704,493...221,710,331
JBrowse link
G Msh6 mutS homolog 6 ISO MGI:1858014 (MGI:2677657|PMID:14632208) RGD PMID:14632208 MGI:2677657 NCBI chr 6:11,644,565...11,662,389
Ensembl chr 6:11,644,578...11,662,499
JBrowse link
G Pclaf PCNA clamp associated factor ISO
ISS
(PMID:23000965)
GO_REF:0000024
RGD
UniProt
PMID:23000965 GO_REF:0000024 NCBI chr 8:71,514,281...71,526,182
Ensembl chr 8:71,514,281...71,526,182
JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 ISO MGI:2678372 (MGI:2675761|PMID:12952892) RGD PMID:12952892 MGI:2675761 NCBI chr18:62,159,128...62,179,635
Ensembl chr18:62,174,670...62,181,102
JBrowse link
G Pml PML nuclear body scaffold ISO MGI:104662 (MGI:3580934|PMID:15626733) RGD PMID:15626733 MGI:3580934 NCBI chr 8:63,002,515...63,034,310
Ensembl chr 8:63,004,870...63,034,226
JBrowse link
G Primpol primase and DNA directed polymerase ISO
IBA
(PMID:24240614), (PMID:24267451)
PMID:21873635
RGD PMID:24240614, PMID:24267451, PMID:21873635 RGD:13792537 NCBI chr16:48,863,385...48,900,409
Ensembl chr16:48,863,418...48,897,795
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 ISO (MGI:4822286|PMID:20647423) RGD PMID:20647423 MGI:4822286 NCBI chr 2:54,857,688...54,893,404
Ensembl chr 2:54,857,688...54,893,404
JBrowse link
G Rad18 RAD18 E3 ubiquitin protein ligase IBA
ISO
PMID:21873635
MGI:3835812 (MGI:2448116|PMID:12509447)
RGD PMID:12509447, PMID:21873635 MGI:2448116, RGD:13792537 NCBI chr 4:144,537,329...144,620,606
Ensembl chr 4:144,536,729...144,620,731
JBrowse link
G Rev1 REV1, DNA directed polymerase ISO (PMID:11485998) RGD PMID:11485998 NCBI chr 9:44,714,137...44,786,330
Ensembl chr 9:44,714,386...44,786,041
JBrowse link
G Ro60 Ro60, Y RNA binding protein ISO MGI:2670227 (MGI:2668758|PMID:12788971), (MGI:5524977|PMID:14680639) RGD PMID:12788971, PMID:14680639 MGI:2668758, MGI:5524977 NCBI chr13:60,546,892...60,567,882
Ensembl chr13:60,546,912...60,567,882
JBrowse link
G Rpain RPA interacting protein ISO (PMID:16135809) RGD PMID:16135809 NCBI chr10:57,606,287...57,613,834
Ensembl chr10:57,606,650...57,613,747
JBrowse link
G Sprtn SprT-like N-terminal domain IEA
ISO
ISS
GO_REF:0000107
(PMID:22681887), (PMID:22894931), (PMID:22902628)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:22681887, PMID:22894931, PMID:22902628 GO_REF:0000024, GO_REF:0000107 NCBI chr19:57,649,901...57,657,158
Ensembl chr19:57,650,163...57,654,864
JBrowse link
G Tipin timeless interacting protein ISO (MGI:3706226|PMID:17141802) RGD PMID:17141802 MGI:3706226 NCBI chr 8:69,753,363...69,768,640
Ensembl chr 8:69,753,373...69,768,305
JBrowse link
G Tp53 tumor protein p53 IEP
ISO
MGI:1857590|MGI:1926340 (MGI:1858868|PMID:10815637), (MGI:2675761|PMID:12952892), (MGI:3032464|PMID:14744935), (MGI:3691523|PMID:11092819) RGD PMID:10815637, PMID:11092819, PMID:12952892, PMID:14744935, PMID:17724205 MGI:1858868, MGI:2675761, MGI:3032464, MGI:3691523, RGD:2290562 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
G Tp53i13 tumor protein p53 inducible protein 13 ISO (PMID:14767535) RGD PMID:14767535 NCBI chr10:62,650,640...62,655,327
Ensembl chr10:62,650,719...62,655,362
JBrowse link
G Trex1 three prime repair exonuclease 1 ISO MGI:3052754 (MGI:5908297|PMID:28351661) RGD PMID:28351661 MGI:5908297 NCBI chr 8:117,796,127...117,797,427
Ensembl chr 8:117,796,128...117,797,427
JBrowse link
G Trim32 tripartite motif-containing 32 ISO (MGI:5009403|PMID:16816390) RGD PMID:16816390 MGI:5009403 NCBI chr 5:81,431,554...81,449,023
Ensembl chr 5:81,431,600...81,442,451
JBrowse link
G Tyr tyrosinase IEP RGD PMID:6175546 RGD:8694330 NCBI chr 1:151,012,598...151,106,802
Ensembl chr 1:151,012,598...151,106,802
JBrowse link
G Uaca uveal autoantigen with coiled-coil domains and ankyrin repeats ISO MGI:3043446 (MGI:3056865|PMID:15271982) RGD PMID:15271982 MGI:3056865 NCBI chr 8:65,686,586...65,774,940
Ensembl chr 8:65,686,648...65,774,989
JBrowse link
G Ube2a ubiquitin-conjugating enzyme E2A ISO UniProtKB:P06104 (PMID:1717990) RGD PMID:1717990 NCBI chr  X:123,486,988...123,497,726
Ensembl chr  X:123,486,989...123,497,726
JBrowse link
G Ube2b ubiquitin-conjugating enzyme E2B ISO UniProtKB:P06104 (PMID:1717990) RGD PMID:1717990 NCBI chr10:37,439,947...37,454,867
Ensembl chr10:37,441,284...37,455,022
JBrowse link
G Ube4b ubiquitination factor E4B ISO (PMID:11802788) RGD PMID:11802788 NCBI chr 5:166,156,033...166,259,069
Ensembl chr 5:166,156,033...166,259,069
JBrowse link
G Usf1 upstream transcription factor 1 ISO (MGI:3525429|PMID:15358786) RGD PMID:15358786 MGI:3525429 NCBI chr13:89,797,750...89,805,561
Ensembl chr13:89,797,800...89,805,558
JBrowse link
G Usp1 ubiquitin specific peptidase 1 ISO
ISS
(PMID:18082604)
GO_REF:0000024
RGD
UniProt
PMID:18082604 GO_REF:0000024 NCBI chr 5:117,583,502...117,594,872
Ensembl chr 5:117,583,502...117,594,870
JBrowse link
G Uvssa UV-stimulated scaffold protein A ISS
IEA
IBA
ISO
GO_REF:0000024
GO_REF:0000107
PMID:21873635
(PMID:22466610), (PMID:22466611), (PMID:22466612)
UniProt
Ensembl
RGD
PMID:22466610, PMID:22466611, PMID:22466612, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr14:82,621,028...82,658,912
Ensembl chr14:82,623,050...82,658,891
JBrowse link
G Xpa XPA, DNA damage recognition and repair factor ISO MGI:1857939 (MGI:3655576|PMID:10843671) RGD PMID:10843671 MGI:3655576 NCBI chr 5:61,749,767...61,793,641
Ensembl chr 5:61,749,767...61,792,928
JBrowse link
G Zranb3 zinc finger RANBP2-type containing 3 ISO (PMID:22704558) RGD PMID:22704558 NCBI chr13:44,661,375...44,812,430
Ensembl chr13:44,661,398...44,798,543
JBrowse link
response to UV-A term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 ISO (PMID:18483258) RGD PMID:18483258 NCBI chr 6:137,218,398...137,239,970
Ensembl chr 6:137,218,376...137,236,258
JBrowse link
G Ccnd1 cyclin D1 ISO
ISS
(PMID:18483258)
GO_REF:0000024
RGD
UniProt
PMID:18483258 GO_REF:0000024 NCBI chr 1:218,090,750...218,100,447
Ensembl chr 1:218,090,750...218,100,325
JBrowse link
G Cryaa crystallin, alpha A ISO MGI:1858025 (MGI:1321356|PMID:9813033) RGD PMID:9813033 MGI:1321356 NCBI chr20:10,438,444...10,442,189
Ensembl chr20:10,438,444...10,442,187
JBrowse link
G Egfr epidermal growth factor receptor ISO (PMID:18483258) RGD PMID:18483258 NCBI chr14:99,919,485...100,104,136
Ensembl chr14:99,919,485...100,098,796
JBrowse link
response to UV-B term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2, apoptosis regulator IEA
ISO
GO_REF:0000107
MGI:1857430 (MGI:1330635|PMID:10200548)
Ensembl
RGD
PMID:10200548 GO_REF:0000107, MGI:1330635 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor ISO MGI:1932102 (MGI:1859141|PMID:10850428), (MGI:3699047|PMID:17145777) RGD PMID:10850428, PMID:17145777 MGI:1859141, MGI:3699047 NCBI chr16:8,734,028...8,804,610
Ensembl chr16:8,734,035...8,804,610
JBrowse link
G Hmgn1 high mobility group nucleosome binding domain 1 ISO MGI:3590648 (MGI:3590574|PMID:12660172) RGD PMID:12660172 MGI:3590574 NCBI chr11:36,474,028...36,479,947
Ensembl chr11:36,474,840...36,479,868
JBrowse link
G Il12a interleukin 12A ISO
IEA
(PMID:8992506)
GO_REF:0000107
RGD
Ensembl
PMID:8992506 GO_REF:0000107 NCBI chr 2:165,076,945...165,083,996
Ensembl chr 2:165,076,607...165,084,318
JBrowse link
G Il12b interleukin 12B ISO (PMID:8992506) RGD PMID:8992506 NCBI chr10:30,034,447...30,048,774
Ensembl chr10:30,038,709...30,048,085
JBrowse link
G Ivl involucrin ISO (PMID:16639001) RGD PMID:16639001 NCBI chr 2:192,761,171...192,773,346
Ensembl chr 2:192,761,538...192,763,577
JBrowse link
G Msh2 mutS homolog 2 IEA
ISO
GO_REF:0000107
MGI:1857940 (MGI:3487309|PMID:15166087)
Ensembl
RGD
PMID:15166087 GO_REF:0000107, MGI:3487309 NCBI chr 6:11,215,951...11,274,916
Ensembl chr 6:11,215,963...11,274,932
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit ISO (PMID:15616591) RGD PMID:15616591 NCBI chr 1:220,992,770...221,003,249
Ensembl chr 1:220,992,770...221,003,249
JBrowse link
G Tp53 tumor protein p53 IEP RGD PMID:22559303 RGD:8547754 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
G Xpc XPC complex subunit, DNA damage recognition and repair factor ISO MGI:1859840 (MGI:3034118|PMID:15010313) RGD PMID:15010313 MGI:3034118 NCBI chr 4:123,134,457...123,161,985
Ensembl chr 4:123,134,457...123,161,985
JBrowse link
response to UV-C term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bak1 BCL2-antagonist/killer 1 IEP RGD PMID:19520675 RGD:2316118 NCBI chr20:5,609,620...5,618,899
Ensembl chr20:5,609,625...5,618,260
JBrowse link
G Bcl3 BCL3, transcription coactivator ISO (PMID:16384933) RGD PMID:16384933 NCBI chr 1:80,730,758...80,745,273
Ensembl chr 1:80,730,499...80,744,831
JBrowse link
G Brca2 BRCA2, DNA repair associated IEA
ISO
GO_REF:0000107
MGI:1930616 (MGI:1203345|PMID:9660919)
Ensembl
RGD
PMID:9660919 GO_REF:0000107, MGI:1203345 NCBI chr12:503,660...544,754
Ensembl chr12:504,007...544,748
JBrowse link
G Dcun1d3 defective in cullin neddylation 1 domain containing 3 ISO
ISS
(PMID:18823379)
GO_REF:0000024
RGD
UniProt
PMID:18823379 GO_REF:0000024 NCBI chr 1:189,626,442...189,666,440
Ensembl chr 1:189,627,972...189,666,440
JBrowse link
G Ercc5 ERCC excision repair 5, endonuclease ISO (PMID:17208056) RGD PMID:17208056 NCBI chr 9:50,928,847...50,970,962
Ensembl chr 9:50,925,619...50,970,955
JBrowse link
G Hmgn1 high mobility group nucleosome binding domain 1 ISO (MGI:3590574|PMID:12660172) RGD PMID:12660172 MGI:3590574 NCBI chr11:36,474,028...36,479,947
Ensembl chr11:36,474,840...36,479,868
JBrowse link
G Map3k4 mitogen activated protein kinase kinase kinase 4 ISO (PMID:9305639) RGD PMID:9305639 NCBI chr 1:48,625,714...48,711,642
Ensembl chr 1:48,625,743...48,711,642
JBrowse link
G Polh DNA polymerase eta ISO (PMID:17563354) RGD PMID:17563354 NCBI chr 9:17,163,354...17,198,006
Ensembl chr 9:17,163,354...17,197,132
JBrowse link
G Wrn WRN RecQ like helicase ISO (PMID:17563354) RGD PMID:17563354 NCBI chr16:62,483,773...62,619,018
Ensembl chr16:62,483,761...62,615,375
JBrowse link
G Yy1 YY1 transcription factor ISO (PMID:18026119)
(MGI:5009388|PMID:18026119)
RGD PMID:18026119 MGI:5009388 NCBI chr 6:132,702,443...132,726,848
Ensembl chr 6:132,702,448...132,727,046
JBrowse link
rhodopsin mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnat1 G protein subunit alpha transducin 1 IMP RGD PMID:11931744 RGD:1599009 NCBI chr 8:116,433,302...116,438,038
Ensembl chr 8:116,433,302...116,438,038
JBrowse link
G Grk1 G protein-coupled receptor kinase 1 TAS RGD PMID:9147475 RGD:729748 NCBI chr16:81,153,489...81,165,442
Ensembl chr16:81,153,489...81,165,442
JBrowse link
G Opn4 opsin 4 ISO (MGI:4438311|PMID:19793992) RGD PMID:19793992 MGI:4438311 NCBI chr16:10,943,353...10,966,602
Ensembl chr16:10,943,341...10,952,549
JBrowse link
G Pcp2 Purkinje cell protein 2 ISO MGI:3579782 (MGI:3817370|PMID:18768681) RGD PMID:18768681 MGI:3817370 NCBI chr12:2,172,378...2,174,674
Ensembl chr12:2,172,378...2,174,131
JBrowse link
G Rho rhodopsin IDA RGD PMID:8814134 RGD:6893595 NCBI chr 4:147,832,136...147,837,298
Ensembl chr 4:147,832,136...147,837,298
JBrowse link
short-day photoperiodism term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Npy neuropeptide Y IEP RGD PMID:19490367 RGD:6480663 NCBI chr 4:79,557,856...79,565,059
Ensembl chr 4:79,557,854...79,565,097
JBrowse link
UV protection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cat catalase ISO (PMID:16644728), (PMID:17053817) RGD PMID:16644728, PMID:17053817 NCBI chr 3:93,379,872...93,412,058
Ensembl chr 3:93,379,874...93,412,058
JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit ISO MGI:2158940|MGI:3050065|MGI:3692923 (MGI:1342943|PMID:10454634), (MGI:3692264|PMID:16682947), (MGI:63544|PMID:8275084) RGD PMID:8275084, PMID:10454634, PMID:16682947 MGI:1342943, MGI:3692264, MGI:63544 NCBI chr 1:80,256,973...80,268,198
Ensembl chr 1:80,256,973...80,268,198
JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit ISO UniProtKB:Q60452 (PMID:2835663)
MGI:2183949 (MGI:1267106|PMID:9651581)
RGD PMID:2835663, PMID:9651581 MGI:1267106 NCBI chr 1:80,293,574...80,307,334
Ensembl chr 1:80,293,566...80,307,344
JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit ISO UniProtKB:A0MQ57 (MGI:50153|PMID:1747940) RGD PMID:1747940 MGI:50153 NCBI chr18:25,037,668...25,068,380
Ensembl chr18:25,037,625...25,068,389
JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit ISO MGI:3028660 (MGI:3027419|PMID:14729965) RGD PMID:14729965 MGI:3027419 NCBI chr10:2,010,140...2,037,953
Ensembl chr10:2,010,648...2,037,891
JBrowse link
G Ercc5 ERCC excision repair 5, endonuclease ISO UniProtKB:P35689 (PMID:7510366)
(MGI:77034|PMID:7510366), (MGI:82906|PMID:8703115)
RGD PMID:7510366, PMID:8703115 MGI:77034, MGI:82906 NCBI chr 9:50,928,847...50,970,962
Ensembl chr 9:50,925,619...50,970,955
JBrowse link
G Gpx1 glutathione peroxidase 1 ISO
IEA
(PMID:17097614)
GO_REF:0000107
RGD
Ensembl
PMID:17097614 GO_REF:0000107 NCBI chr 8:117,117,430...117,118,528
Ensembl chr 8:117,117,430...117,118,522
JBrowse link
G Mfap4 microfibril associated protein 4 ISO (PMID:22355679) RGD PMID:22355679 NCBI chr10:47,765,463...47,768,484
Ensembl chr10:47,765,432...47,768,483
JBrowse link
G Sdf4 stromal cell derived factor 4 IMP PMID:18355758 BHF-UCL PMID:18355758 RGD:8554427 NCBI chr 5:173,425,922...173,444,478
Ensembl chr 5:173,425,907...173,444,620
JBrowse link
G Xpa XPA, DNA damage recognition and repair factor ISO (PMID:1601884) RGD PMID:1601884 NCBI chr 5:61,749,767...61,793,641
Ensembl chr 5:61,749,767...61,792,928
JBrowse link
UV-damage excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr5 actin related protein 5 ISO (PMID:20855601) RGD PMID:20855601 NCBI chr 3:155,118,567...155,132,073
Ensembl chr 3:155,119,042...155,131,829
JBrowse link
G Cul4b cullin 4B ISO (PMID:22334663) RGD PMID:22334663 NCBI chr  X:124,831,391...124,870,329
Ensembl chr  X:124,832,628...124,870,329
JBrowse link
G Ddb1 damage-specific DNA binding protein 1 IEA
ISO
GO_REF:0000107
(PMID:22334663)
Ensembl
RGD
PMID:22334663 GO_REF:0000107 NCBI chr 1:226,657,561...226,683,356
Ensembl chr 1:226,657,561...226,683,347
JBrowse link
G Ddb2 damage specific DNA binding protein 2 ISO (PMID:22334663) RGD PMID:22334663 NCBI chr 3:80,030,437...80,052,984
Ensembl chr 3:80,030,437...80,052,953
JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:80,256,973...80,268,198
Ensembl chr 1:80,256,973...80,268,198
JBrowse link
G Ino80 INO80 complex ATPase subunit ISO (PMID:20855601) RGD PMID:20855601 NCBI chr 3:111,186,371...111,266,542
Ensembl chr 3:111,187,711...111,266,542
JBrowse link
G Mc1r melanocortin 1 receptor ISO (PMID:18292087) RGD PMID:18292087 NCBI chr19:56,215,420...56,219,987 JBrowse link
G Sirt1 sirtuin 1 ISO
IEA
(PMID:20670893)
GO_REF:0000107
RGD
Ensembl
PMID:20670893 GO_REF:0000107 NCBI chr20:26,831,971...26,851,587
Ensembl chr20:26,833,357...26,852,199
JBrowse link
G Xpa XPA, DNA damage recognition and repair factor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:61,749,767...61,793,641
Ensembl chr 5:61,749,767...61,792,928
JBrowse link
G Xpc XPC complex subunit, DNA damage recognition and repair factor ISO (PMID:8077226)
(MGI:5427285|PMID:22431748)
RGD PMID:8077226, PMID:22431748 MGI:5427285 NCBI chr 4:123,134,457...123,161,985
Ensembl chr 4:123,134,457...123,161,985
JBrowse link
UV-damage excision repair, DNA incision term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Xpc XPC complex subunit, DNA damage recognition and repair factor ISO MGI:1931883 (MGI:3697767|PMID:17049932) RGD PMID:17049932 MGI:3697767 NCBI chr 4:123,134,457...123,161,985
Ensembl chr 4:123,134,457...123,161,985
JBrowse link
visual behavior term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dynlrb1 dynein light chain roadblock-type 1 IDA PMID:10816553 UniProt PMID:10816553 RGD:633064 NCBI chr 3:150,761,329...150,782,493
Ensembl chr 3:150,761,329...150,782,493
JBrowse link
G Slc1a2 solute carrier family 1 member 2 ISO MGI:2449707 (MGI:3608234|PMID:16197522) RGD PMID:16197522 MGI:3608234 NCBI chr 3:92,518,679...92,665,731
Ensembl chr 3:92,640,752...92,665,644
JBrowse link
visual learning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca7 ATP binding cassette subfamily A member 7 ISO (MGI:5774886|PMID:27030769) RGD PMID:27030769 MGI:5774886 NCBI chr 7:12,742,433...12,762,423
Ensembl chr 7:12,742,433...12,762,341
JBrowse link
G Abcc8 ATP binding cassette subfamily C member 8 IMP RGD PMID:24114458 RGD:10003028 NCBI chr 1:102,110,708...102,191,287
Ensembl chr 1:102,110,708...102,191,287
JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase ISO MGI:96610 (MGI:5315777|PMID:22357865) RGD PMID:22357865 MGI:5315777 NCBI chr13:74,154,533...74,333,244
Ensembl chr13:74,154,835...74,333,244
JBrowse link
G Adam2 ADAM metallopeptidase domain 2 IEA
ISO
GO_REF:0000107
MGI:3625523 (MGI:3620328|PMID:16504143)
Ensembl
RGD
PMID:16504143 GO_REF:0000107, MGI:3620328 NCBI chr15:42,708,536...42,751,281
Ensembl chr15:42,708,387...42,751,330
JBrowse link
G Adra1b adrenoceptor alpha 1B ISO MGI:2148638 (MGI:1932224|PMID:11222061) RGD PMID:11222061 MGI:1932224 NCBI chr10:29,392,762...29,450,644
Ensembl chr10:29,392,762...29,450,644
JBrowse link
G Ap1s2 adaptor related protein complex 1 subunit sigma 2 ISO MGI:5620801 (MGI:5617942|PMID:20203623) RGD PMID:20203623 MGI:5617942 NCBI chr  X:32,329,883...32,376,301
Ensembl chr  X:32,329,598...32,355,307
JBrowse link
G Apbb1 amyloid beta precursor protein binding family B member 1 ISO MGI:3514266 (MGI:3522016|PMID:14689444) RGD PMID:14689444 MGI:3522016 NCBI chr 1:170,387,625...170,411,263
Ensembl chr 1:170,387,609...170,404,056
JBrowse link
G App amyloid beta precursor protein ISS
ISO
GO_REF:0000024
MGI:2136847 (MGI:1344078|PMID:10338291)
UniProt
RGD
PMID:10338291 GO_REF:0000024, MGI:1344078 NCBI chr11:24,425,013...24,641,872
Ensembl chr11:24,425,005...24,641,858
JBrowse link
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 ISO MGI:2451291 (MGI:3696486|PMID:17234593) RGD PMID:17234593 MGI:3696486 NCBI chr13:90,651,682...90,676,629
Ensembl chr13:90,651,686...90,676,629
JBrowse link
G Atp1a3 ATPase Na+/K+ transporting subunit alpha 3 ISO MGI:3696954 (MGI:3696486|PMID:17234593) RGD PMID:17234593 MGI:3696486 NCBI chr 1:81,852,423...81,881,565
Ensembl chr 1:81,852,429...81,881,549
JBrowse link
G Atxn1 ataxin 1 ISO MGI:2181805|MGI:2429435 (MGI:1270078|PMID:9651231), (MGI:4818500|PMID:20628574) RGD PMID:9651231, PMID:20628574 MGI:1270078, MGI:4818500 NCBI chr17:19,160,986...19,533,814
Ensembl chr17:19,249,952...19,533,814
JBrowse link
G B4galt2 beta-1,4-galactosyltransferase 2 ISO MGI:3849305 (MGI:3849110|PMID:19265195) RGD PMID:19265195 MGI:3849110 NCBI chr 5:136,707,510...136,717,345
Ensembl chr 5:136,707,510...136,715,981
JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase ISO MGI:3620008|MGI:3622450 (MGI:3620005|PMID:16342120) RGD PMID:16342120 MGI:3620005 NCBI chr 4:67,389,331...67,520,549
Ensembl chr 4:67,396,192...67,520,356
JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C ISO MGI:2674114 (MGI:3607037|PMID:16251435) RGD PMID:16251435 MGI:3607037 NCBI chr 4:150,635,808...151,270,790
Ensembl chr 4:150,641,066...150,829,913
JBrowse link
G Cacna1e calcium voltage-gated channel subunit alpha1 E ISO MGI:2179732 (MGI:1932239|PMID:11263998) RGD PMID:11263998 MGI:1932239 NCBI chr13:71,899,445...72,534,992
Ensembl chr13:71,906,702...72,367,980
JBrowse link
G Cck cholecystokinin IMP RGD PMID:12450740 RGD:1626100 NCBI chr 8:130,120,525...130,127,515
Ensembl chr 8:130,120,523...130,127,392
JBrowse link
G Cdk5 cyclin-dependent kinase 5 ISO MGI:3720892|MGI:3720937 (MGI:3720432|PMID:17529984) RGD PMID:17529984 MGI:3720432 NCBI chr 4:7,282,945...7,287,427
Ensembl chr 4:7,282,948...7,288,383
JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit ISO (PMID:15964197)
MGI:1926253 (MGI:1332977|PMID:10064590), (MGI:3584096|PMID:12876201)
RGD PMID:10064590, PMID:12876201, PMID:15964197 MGI:1332977, MGI:3584096 NCBI chr 2:189,088,570...189,096,785
Ensembl chr 2:189,088,570...189,096,785
JBrowse link
G Ckap5 cytoskeleton associated protein 5 ISO MGI:2177650|MGI:5570192 (MGI:5546446|PMID:23936366) RGD PMID:23936366 MGI:5546446 NCBI chr 3:80,424,320...80,526,583
Ensembl chr 3:80,468,154...80,526,593
JBrowse link
G Creb1 cAMP responsive element binding protein 1 IMP RGD PMID:25031400 RGD:10059390 NCBI chr 9:71,229,753...71,298,994
Ensembl chr 9:71,230,108...71,293,435
JBrowse link
G Crhr1 corticotropin releasing hormone receptor 1 IMP postnatal blockade improves adult learning and memory RGD PMID:15932935 RGD:1626241 NCBI chr10:92,191,473...92,233,662
Ensembl chr10:92,191,718...92,232,645
JBrowse link
G Ctns cystinosin, lysosomal cystine transporter ISO MGI:2388945 (MGI:3848688|PMID:17977621) RGD PMID:17977621 MGI:3848688 NCBI chr10:59,749,250...59,772,475
Ensembl chr10:59,749,256...59,764,868
JBrowse link
G Dbh dopamine beta-hydroxylase IEA
ISO
GO_REF:0000107
MGI:1857556 (MGI:893736|PMID:9189272)
Ensembl
RGD
PMID:9189272 GO_REF:0000107, MGI:893736 NCBI chr 3:5,709,236...5,731,895
Ensembl chr 3:5,709,236...5,731,898
JBrowse link
G Dcdc2 doublecortin domain containing 2 ISO MGI:5288003 (MGI:5442271|PMID:21883923), (MGI:5698331|PMID:25130614) RGD PMID:21883923, PMID:25130614 MGI:5442271, MGI:5698331 NCBI chr17:41,838,201...42,031,265
Ensembl chr17:41,838,201...42,031,265
JBrowse link
G Ddhd2 DDHD domain containing 2 ISO MGI:5662251 (MGI:5608822|PMID:25267624) RGD PMID:25267624 MGI:5608822 NCBI chr16:71,090,096...71,120,713
Ensembl chr16:71,090,045...71,118,552
JBrowse link
G Deaf1 DEAF1 transcription factor ISO (MGI:5576037|PMID:24726472) RGD PMID:24726472 MGI:5576037 NCBI chr 1:214,283,787...214,317,466
Ensembl chr 1:214,283,790...214,317,466
JBrowse link
G Drd1 dopamine receptor D1 IEA
ISO
GO_REF:0000107
MGI:1857158|MGI:1857159|MGI:2159306 (MGI:1274984|PMID:9692749), (MGI:3530728|PMID:15684065), (MGI:3607822|PMID:10884517), (MGI:3607825|PMID:10585522)
Ensembl
RGD
PMID:9692749, PMID:10585522, PMID:10884517, PMID:15684065 GO_REF:0000107, MGI:1274984, MGI:3530728, MGI:3607822, MGI:3607825 NCBI chr17:11,099,736...11,104,352
Ensembl chr17:11,101,306...11,103,541
JBrowse link
G Drd2 dopamine receptor D2 ISO MGI:2388386 (MGI:3626135|PMID:12097513) RGD PMID:12097513 MGI:3626135 NCBI chr 8:53,678,777...53,743,643
Ensembl chr 8:53,678,777...53,743,642
JBrowse link
G Drd3 dopamine receptor D3 ISO MGI:2388387 (MGI:3626135|PMID:12097513) RGD PMID:12097513 MGI:3626135 NCBI chr11:61,819,102...61,883,223
Ensembl chr11:61,822,077...61,874,327
JBrowse link
G Drd5 dopamine receptor D5 IMP RGD PMID:17142305 RGD:1600982 NCBI chr14:77,220,579...77,222,006
Ensembl chr14:77,220,579...77,222,006
JBrowse link
G Foxb1 forkhead box B1 ISS
ISO
GO_REF:0000024
(MGI:3589689|PMID:15654859)
UniProt
RGD
PMID:15654859 GO_REF:0000024, MGI:3589689 NCBI chr 8:75,992,751...75,995,371
Ensembl chr 8:75,992,755...75,995,371
JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 IEA
ISO
GO_REF:0000107
MGI:1928279|MGI:1928283|MGI:1928284|MGI:2177650|MGI:2448952|MGI:3611337|MGI:97306 (MGI:1858680|PMID:10818139), (MGI:3623866|PMID:16611824), (MGI:3703316|PMID:17313573), (MGI:84850|PMID:8980238), (MGI:86085|PMID:9054942), (MGI:893741|PMID:9246451)
Ensembl
RGD
PMID:8980238, PMID:9054942, PMID:9246451, PMID:10818139, PMID:16611824, PMID:17313573 GO_REF:0000107, MGI:1858680, MGI:3623866, MGI:3703316, MGI:84850, MGI:86085, MGI:893741 NCBI chr 3:2,507,745...2,534,664
Ensembl chr 3:2,506,896...2,534,663
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A IEA
ISO
GO_REF:0000107
MGI:1928285 (MGI:70176|PMID:7816096)
Ensembl
RGD
PMID:7816096 GO_REF:0000107, MGI:70176 NCBI chr10:5,707,806...6,123,568
Ensembl chr10:5,930,298...6,119,990
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha IEA
ISO
GO_REF:0000107
MGI:2677899 (MGI:2676530|PMID:12972594)
Ensembl
RGD
PMID:12972594 GO_REF:0000107, MGI:2676530 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052
JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase ISO MGI:97306 (MGI:3610917|PMID:12409258) RGD PMID:12409258 MGI:3610917 NCBI chr 2:27,480,224...27,500,654
Ensembl chr 2:27,480,226...27,500,654
JBrowse link
G Hrh1 histamine receptor H 1 IEA
ISO
GO_REF:0000107
MGI:2182945 (MGI:3703474|PMID:17145090)
Ensembl
RGD
PMID:17145090 GO_REF:0000107, MGI:3703474 NCBI chr 4:146,374,596...146,458,148
Ensembl chr 4:146,455,332...146,457,074
JBrowse link
G Hrh2 histamine receptor H 2 IEA
ISO
GO_REF:0000107
MGI:2182949 (MGI:3703474|PMID:17145090)
Ensembl
RGD
PMID:17145090 GO_REF:0000107, MGI:3703474 NCBI chr17:10,912,959...10,931,389
Ensembl chr17:10,921,507...10,952,441
JBrowse link
G Htt huntingtin ISO MGI:2177743 (MGI:73644|PMID:7774020) RGD PMID:7774020 MGI:73644 NCBI chr14:81,105,139...81,254,637
Ensembl chr14:81,105,139...81,254,637
JBrowse link
G Idua alpha-L-iduronidase ISO MGI:2176236 (MGI:3771256|PMID:18022143) RGD PMID:18022143 MGI:3771256 NCBI chr14:2,041,828...2,056,762
Ensembl chr14:2,042,411...2,056,762
JBrowse link
G Ift20 intraflagellar transport 20 ISO MGI:3817268 (MGI:5139967|PMID:21734285) RGD PMID:21734285 MGI:5139967 NCBI chr10:65,805,808...65,811,353
Ensembl chr10:65,805,860...65,811,351
JBrowse link
G Itgb1 integrin subunit beta 1 IEA
ISO
GO_REF:0000107
MGI:2156945|MGI:2668659|MGI:87860 (MGI:5315777|PMID:22357865)
Ensembl
RGD
PMID:22357865 GO_REF:0000107, MGI:5315777 NCBI chr19:61,677,512...61,725,537
Ensembl chr19:61,677,542...61,725,535
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase IMP RGD PMID:11112797 RGD:2292520 NCBI chr14:35,072,131...35,149,638
Ensembl chr14:35,072,108...35,149,610
JBrowse link
G Kmt2a lysine methyltransferase 2A ISO MGI:3839794 (MGI:5638946|PMID:25834037) RGD PMID:25834037 MGI:5638946 NCBI chr 8:49,110,407...49,185,872
Ensembl chr 8:49,114,990...49,158,971
JBrowse link
G Kras KRAS proto-oncogene, GTPase ISO MGI:97306 (MGI:2157992|PMID:11793011) RGD PMID:11793011 MGI:2157992 NCBI chr 4:179,482,562...179,515,483
Ensembl chr 4:179,486,105...179,515,558
JBrowse link
G Lrrn4 leucine rich repeat neuronal 4 ISO MGI:5428888 (MGI:5428894|PMID:15870286) RGD PMID:15870286 MGI:5428894 NCBI chr 3:125,521,879...125,547,685
Ensembl chr 3:125,523,781...125,533,600
JBrowse link
G Mecp2 methyl CpG binding protein 2 ISO MGI:2183727 (MGI:3611151|PMID:16399702) RGD PMID:16399702 MGI:3611151 NCBI chr  X:156,650,389...156,713,813
Ensembl chr  X:156,655,960...156,705,233
JBrowse link
G Meis2 Meis homeobox 2 ISO (MGI:5638946|PMID:25834037) RGD PMID:25834037 MGI:5638946 NCBI chr 3:107,560,172...107,762,732
Ensembl chr 3:107,559,997...107,760,589
JBrowse link
G Mtor mechanistic target of rapamycin kinase IMP RGD PMID:20599569 RGD:10041021 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
G Ndrg4 NDRG family member 4 IEA
ISO
GO_REF:0000107
(MGI:5286035|PMID:21636852)
Ensembl
RGD
PMID:21636852 GO_REF:0000107, MGI:5286035 NCBI chr19:9,766,439...9,802,396
Ensembl chr19:9,766,439...9,801,942
JBrowse link
G Neto1 neuropilin and tolloid like 1 ISO (MGI:3836361|PMID:19243221) RGD PMID:19243221 MGI:3836361 NCBI chr18:83,471,342...83,585,043
Ensembl chr18:83,471,342...83,584,357
JBrowse link
G Nf1 neurofibromin 1 IEA
ISO
ISS
GO_REF:0000107
MGI:1857478|MGI:2137365|MGI:95819|MGI:96159|MGI:96680 (MGI:1932770|PMID:11279521), (MGI:2157992|PMID:11793011), (MGI:3610622|PMID:16271875), (MGI:86085|PMID:9054942)
GO_REF:0000024
Ensembl
RGD
HGNC
PMID:9054942, PMID:11279521, PMID:11793011, PMID:16271875 GO_REF:0000024, GO_REF:0000107, MGI:1932770, MGI:2157992, MGI:3610622, MGI:86085 NCBI chr10:66,732,460...66,928,706
Ensembl chr10:66,690,133...66,928,903
JBrowse link
G Nlgn3 neuroligin 3 IEA
ISO
GO_REF:0000107
MGI:3758949 (MGI:3758357|PMID:17823315)
Ensembl
RGD
PMID:17823315 GO_REF:0000107, MGI:3758357 NCBI chr  X:71,199,390...71,227,460
Ensembl chr  X:71,199,491...71,222,732
JBrowse link
G Nog noggin IMP RGD PMID:12740172 RGD:10423996 NCBI chr10:76,811,759...76,813,386
Ensembl chr10:76,811,759...76,813,386
JBrowse link
G Nps neuropeptide S ISO (MGI:3850784|PMID:19429110) RGD PMID:19429110 MGI:3850784 NCBI chr 1:207,508,414...207,512,195
Ensembl chr 1:207,508,414...207,512,195
JBrowse link
G Nptn neuroplastin IDA RGD PMID:21480899 RGD:9835376 NCBI chr 8:63,379,062...63,445,694
Ensembl chr 8:63,379,087...63,445,686
JBrowse link
G Nts neurotensin IMP RGD PMID:20219557 RGD:9743918 NCBI chr 7:44,111,594...44,120,998
Ensembl chr 7:44,111,151...44,121,130
JBrowse link
G Pde1b phosphodiesterase 1B ISO MGI:2676625|MGI:94860 (MGI:2181913|PMID:12077213), (MGI:3761427|PMID:17010100) RGD PMID:12077213, PMID:17010100 MGI:2181913, MGI:3761427 NCBI chr 7:145,117,951...145,147,711
Ensembl chr 7:145,117,951...145,145,376
JBrowse link
G Pde8b phosphodiesterase 8B ISO (MGI:5525232|PMID:22925203) RGD PMID:22925203 MGI:5525232 NCBI chr 2:24,718,548...24,955,533
Ensembl chr 2:24,719,976...24,923,128
JBrowse link
G Pias1 protein inhibitor of activated STAT, 1 IMP RGD PMID:25031400 RGD:10059390 NCBI chr 8:67,771,720...67,869,015
Ensembl chr 8:67,771,720...67,869,019
JBrowse link
G Ppp1r1b protein phosphatase 1, regulatory (inhibitor) subunit 1B ISO MGI:97523 (MGI:3761427|PMID:17010100) RGD PMID:17010100 MGI:3761427 NCBI chr10:86,303,727...86,312,770
Ensembl chr10:86,303,727...86,312,762
JBrowse link
G Ptprz1 protein tyrosine phosphatase, receptor type Z1 IEP RGD PMID:12737936 RGD:9590120 NCBI chr 4:49,941,046...50,140,764
Ensembl chr 4:49,941,304...50,140,762
JBrowse link
G Rag1 recombination activating 1 IMP RGD PMID:22964459 RGD:12907572 NCBI chr 3:91,206,394...91,217,491
Ensembl chr 3:91,206,394...91,217,491
JBrowse link
G Rgs14 regulator of G-protein signaling 14 IMP PMID:19574389 UniProt PMID:19574389 RGD:8553361 NCBI chr17:9,777,925...9,792,007
Ensembl chr17:9,777,842...9,792,007
JBrowse link
G Ric8a RIC8 guanine nucleotide exchange factor A IEA
ISO
GO_REF:0000107
MGI:3608888 (MGI:3692154|PMID:16221497)
Ensembl
RGD
PMID:16221497 GO_REF:0000107, MGI:3692154 NCBI chr 1:213,606,599...213,612,905
Ensembl chr 1:213,606,599...213,612,904
JBrowse link
G Sct secretin ISO MGI:3815315 (MGI:4939559|PMID:21159798) RGD PMID:21159798 MGI:4939559 NCBI chr 1:214,264,865...214,277,437
Ensembl chr 1:214,264,754...214,265,668
JBrowse link
G Sgk1 serum/glucocorticoid regulated kinase 1 IMP both spacial learning and enrichment-induced spatial learning facilitation RGD PMID:14656333 RGD:1642778 NCBI chr 1:24,185,451...24,302,309
Ensembl chr 1:24,185,435...24,302,298
JBrowse link
G Slc7a11 solute carrier family 7 member 11 ISO MGI:3608695 (MGI:4948153|PMID:21490221), (MGI:5562570|PMID:24548853) RGD PMID:21490221, PMID:24548853 MGI:4948153, MGI:5562570 NCBI chr 2:139,453,774...139,528,479
Ensembl chr 2:139,453,774...139,528,162
JBrowse link
G Syngap1 synaptic Ras GTPase activating protein 1 IEA
ISO
GO_REF:0000107
MGI:3580631 (MGI:3580530|PMID:12427827)
Ensembl
RGD
PMID:12427827 GO_REF:0000107, MGI:3580530 NCBI chr20:5,535,434...5,564,657
Ensembl chr20:5,535,432...5,564,437
JBrowse link
G Synpo synaptopodin ISO (MGI:2673780|PMID:12928494) RGD PMID:12928494 MGI:2673780 NCBI chr18:55,863,081...55,921,412
Ensembl chr18:55,865,467...55,916,220
JBrowse link
G Tafa2 TAFA chemokine like family member 2 ISO (MGI:6282943|PMID:30137205) RGD PMID:30137205 MGI:6282943 NCBI chr 7:66,017,066...66,496,690
Ensembl chr 7:66,017,086...66,172,360
JBrowse link
G Tanc1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 IEA
ISO
GO_REF:0000107
MGI:4125076 (MGI:4845797|PMID:21068316)
Ensembl
RGD
PMID:21068316 GO_REF:0000107, MGI:4845797 NCBI chr 3:45,683,773...45,917,687
Ensembl chr 3:45,683,993...45,917,745
JBrowse link
G Ttc36 tetratricopeptide repeat domain 36 ISO MGI:5588394 (MGI:6362140|PMID:31537781) RGD PMID:31537781 MGI:6362140 NCBI chr 8:49,106,374...49,109,981
Ensembl chr 8:49,106,374...49,109,981
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    response to stimulus 10580
      response to abiotic stimulus 1514
        response to radiation 535
          response to light stimulus 347
            cellular response to light stimulus + 115
            cone photoresponse recovery 0
            de-etiolation 0
            detection of light stimulus + 51
            energy quenching + 0
            photoperiodism + 36
            photoprotection 0
            phototaxis + 0
            response to UV + 157
            response to blue light + 5
            response to light intensity + 17
            response to red or far red light + 1
            visual behavior + 76
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.