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ONTOLOGY REPORT - ANNOTATIONS


Term:putrescine biosynthetic process
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Accession:GO:0009446 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane; putrescine can be synthesized from arginine or ornithine and is the metabolic precursor of spermidine and spermine.
Synonyms:exact_synonym: putrescine anabolism;   putrescine biosynthesis;   putrescine formation;   putrescine synthesis


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putrescine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Odc1 ornithine decarboxylase 1 JBrowse link 6 42,852,529 42,859,142 RGD:1578320
RGD:7242912
G Paox polyamine oxidase JBrowse link 1 212,578,444 212,603,722 RGD:1624291
putrescine biosynthetic process from arginine, using agmatinase term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agmat agmatinase JBrowse link 5 160,306,754 160,321,951 RGD:13792537
putrescine biosynthetic process from ornithine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Azin1 antizyme inhibitor 1 JBrowse link 7 77,345,646 77,372,398 RGD:13792537
G Azin2 antizyme inhibitor 2 JBrowse link 5 147,120,128 147,148,576 RGD:13792537
G Odc1 ornithine decarboxylase 1 JBrowse link 6 42,852,529 42,859,142 RGD:1600115
RGD:13792537
RGD:1624291
G RGD1562036 similar to ornithine decarboxylase JBrowse link 5 148,432,213 148,444,188 RGD:13792537

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18166
    metabolic process 10845
      nitrogen compound metabolic process 9243
        ammonium ion metabolic process 182
          putrescine metabolic process 7
            putrescine biosynthetic process 6
              putrescine biosynthetic process from arginine + 1
              putrescine biosynthetic process from ornithine 4
Path 2
Term Annotations click to browse term
  biological_process 18166
    metabolic process 10845
      nitrogen compound metabolic process 9243
        organonitrogen compound metabolic process 6419
          amine metabolic process 91
            cellular amine metabolic process 83
              cellular biogenic amine metabolic process 47
                polyamine metabolic process 19
                  putrescine metabolic process 7
                    putrescine biosynthetic process 6
                      putrescine biosynthetic process from arginine + 1
                      putrescine biosynthetic process from ornithine 4
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.