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ONTOLOGY REPORT - ANNOTATIONS


Term:detection of external stimulus
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Accession:GO:0009581 term browser browse the term
Definition:The series of events in which an external stimulus is received by a cell and converted into a molecular signal.
Synonyms:related_synonym: perception of external stimulus


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absorption of visible light term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rho rhodopsin ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 4:147,832,136...147,837,298
Ensembl chr 4:147,832,136...147,837,298
JBrowse link
adaptation of rhodopsin mediated signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rdh11 retinol dehydrogenase 11 ISO MGI:3586379 (MGI:3584215|PMID:15790565) RGD PMID:15790565 MGI:3584215 NCBI chr 6:102,356,498...102,372,618
Ensembl chr 6:102,356,492...102,372,611
JBrowse link
G Rs1 retinoschisin 1 ISO MGI:3056058 (MGI:3055638|PMID:15326152) RGD PMID:15326152 MGI:3055638 NCBI chr  X:35,749,957...35,777,243
Ensembl chr  X:35,749,957...35,777,243
JBrowse link
detection of cold stimulus involved in thermoception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grik2 glutamate ionotropic receptor kainate type subunit 2 ISS
ISO
GO_REF:0000024
(MGI:6414684|PMID:31474366)
UniProt
RGD
PMID:31474366 GO_REF:0000024, MGI:6414684 NCBI chr20:53,791,428...54,517,691
Ensembl chr20:53,789,760...54,517,709
JBrowse link
detection of gravity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nox3 NADPH oxidase 3 ISO MGI:1856606 (MGI:1351720|PMID:10491954) RGD PMID:10491954 MGI:1351720 NCBI chr 1:44,550,994...44,615,760
Ensembl chr 1:44,550,994...44,615,760
JBrowse link
G Otop1 otopetrin 1 ISO MGI:1856638|MGI:2655558 (MGI:2654297|PMID:12651873) RGD PMID:12651873 MGI:2654297 NCBI chr14:77,236,278...77,263,729
Ensembl chr14:77,236,278...77,263,729
JBrowse link
detection of light stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde6b phosphodiesterase 6B ISO MGI:1856373 (MGI:2155023|PMID:11747369) RGD PMID:11747369 MGI:2155023 NCBI chr14:2,328,690...2,371,913
Ensembl chr14:2,328,750...2,371,883
JBrowse link
G Rho rhodopsin ISO MGI:2181812 (MGI:2155023|PMID:11747369) RGD PMID:11747369 MGI:2155023 NCBI chr 4:147,832,136...147,837,298
Ensembl chr 4:147,832,136...147,837,298
JBrowse link
detection of light stimulus involved in visual perception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp8a2 ATPase phospholipid transporting 8A2 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr15:39,955,689...40,488,737
Ensembl chr15:40,000,322...40,428,800
JBrowse link
G Best1 bestrophin 1 ISO MGI:3795281 (MGI:3795256|PMID:16636205) RGD PMID:16636205 MGI:3795256 NCBI chr 1:226,033,146...226,049,893
Ensembl chr 1:226,030,875...226,049,929
JBrowse link
G Cacna1f calcium voltage-gated channel subunit alpha1 F ISO (PMID:7571473) RGD PMID:7571473 NCBI chr  X:15,712,709...15,741,135
Ensembl chr  X:15,712,713...15,741,103
JBrowse link
G Cacna2d4 calcium voltage-gated channel auxiliary subunit alpha2delta 4 ISO (PMID:17033974) RGD PMID:17033974 NCBI chr 4:151,298,548...151,409,263
Ensembl chr 4:151,298,548...151,409,263
JBrowse link
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 ISO MGI:1856936 (MGI:3795256|PMID:16636205) RGD PMID:16636205 MGI:3795256 NCBI chr 3:37,950,846...38,211,478
Ensembl chr 3:37,955,069...38,090,526
JBrowse link
G Ccdc66 coiled-coil domain containing 66 ISO (MGI:5141557|PMID:21680557) RGD PMID:21680557 MGI:5141557 NCBI chr16:3,107,119...3,139,188
Ensembl chr16:3,110,239...3,139,177
JBrowse link
G Cep250 centrosomal protein 250 ISO (MGI:6317055|PMID:30998843) RGD PMID:30998843 MGI:6317055 NCBI chr 3:151,508,366...151,544,631
Ensembl chr 3:151,508,361...151,544,674
JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 ISO (PMID:15557452) RGD PMID:15557452 NCBI chr19:10,142,440...10,206,618
Ensembl chr19:10,142,496...10,206,681
JBrowse link
G Crb1 crumbs cell polarity complex component 1 ISO (MGI:5315300|PMID:22447858) RGD PMID:22447858 MGI:5315300 NCBI chr13:56,270,519...56,462,893
Ensembl chr13:56,270,781...56,462,834
JBrowse link
G Gja10 gap junction protein, alpha 10 ISO MGI:3043946 (MGI:3654563|PMID:16820008) RGD PMID:16820008 MGI:3654563 NCBI chr 5:47,819,484...47,841,138
Ensembl chr 5:47,835,066...47,836,586
JBrowse link
G Gnat1 G protein subunit alpha transducin 1 ISO (PMID:17584859)
MGI:2152779 (MGI:3772743|PMID:18171936)
RGD PMID:17584859, PMID:18171936 MGI:3772743 NCBI chr 8:116,433,302...116,438,038
Ensembl chr 8:116,433,302...116,438,038
JBrowse link
G Gnat2 G protein subunit alpha transducin 2 ISO (PMID:12077706)
MGI:3588845 (MGI:3714271|PMID:17065522)
RGD PMID:12077706, PMID:17065522 MGI:3714271 NCBI chr 2:210,880,754...210,890,765
Ensembl chr 2:210,880,777...210,889,881
JBrowse link
G Grm6 glutamate metabotropic receptor 6 ISO
ISS
(PMID:17405131)
GO_REF:0000024
RGD
UniProt
PMID:17405131 GO_REF:0000024 NCBI chr10:36,345,503...36,363,416
Ensembl chr10:36,345,939...36,360,665
JBrowse link
G Gucy2f guanylate cyclase 2F ISO (MGI:3708225|PMID:17255100) RGD PMID:17255100 MGI:3708225 NCBI chr  X:113,372,240...113,474,210
Ensembl chr  X:113,372,240...113,474,164
JBrowse link
G Prph2 peripherin 2 ISO MGI:1856523|MGI:6367783|MGI:6367794|MGI:97998 (MGI:5905515|PMID:28053051), (MGI:6305433|PMID:26420485) RGD PMID:26420485, PMID:28053051 MGI:5905515, MGI:6305433 NCBI chr 9:16,085,933...16,386,176 JBrowse link
G Rbp4 retinol binding protein 4 ISO MGI:2445721 (MGI:3687059|PMID:12484775) RGD PMID:12484775 MGI:3687059 NCBI chr 1:256,806,476...256,813,678
Ensembl chr 1:256,806,472...256,813,711
JBrowse link
G Reep6 receptor accessory protein 6 ISO
ISS
(PMID:27889058)
GO_REF:0000024
RGD
UniProt
PMID:27889058 GO_REF:0000024 NCBI chr 7:12,240,059...12,246,814
Ensembl chr 7:12,240,060...12,246,729
JBrowse link
G Rgs9bp regulator of G protein signaling 9 binding protein ISO MGI:3028628 (MGI:3027216|PMID:14625292) RGD PMID:14625292 MGI:3027216 NCBI chr 1:91,855,270...91,855,983
Ensembl chr 1:91,855,270...91,855,983
JBrowse link
G Rom1 retinal outer segment membrane protein 1 ISO MGI:102791 (MGI:5905515|PMID:28053051) RGD PMID:28053051 MGI:5905515 NCBI chr 1:225,126,732...225,128,740
Ensembl chr 1:225,126,734...225,128,740
JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 ISO (PMID:15557452) RGD PMID:15557452 NCBI chr 2:266,141,581...266,169,197
Ensembl chr 2:266,141,581...266,169,197
JBrowse link
G Rpgrip1 RPGR interacting protein 1 ISO (PMID:21521437) RGD PMID:21521437 NCBI chr15:28,521,287...28,575,046
Ensembl chr15:28,522,737...28,574,737
JBrowse link
G Sema5a semaphorin 5A ISO MGI:107555 (MGI:5140622|PMID:21835343) RGD PMID:21835343 MGI:5140622 NCBI chr 2:85,377,318...85,808,970
Ensembl chr 2:85,377,318...85,808,970
JBrowse link
G Sema5b semaphorin 5B ISO MGI:107556 (MGI:5140622|PMID:21835343) RGD PMID:21835343 MGI:5140622 NCBI chr11:68,304,844...68,435,109
Ensembl chr11:68,306,659...68,349,238
JBrowse link
G Tulp1 TUB like protein 1 ISO (PMID:15557452) RGD PMID:15557452 NCBI chr20:7,931,673...7,943,601
Ensembl chr20:7,931,674...7,943,575
JBrowse link
detection of mechanical stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ano3 anoctamin 3 IMP RGD PMID:23872594 RGD:9681745 NCBI chr 3:101,843,516...102,203,368
Ensembl chr 3:101,840,630...102,151,489
JBrowse link
G Jup junction plakoglobin ISO (PMID:18937352) RGD PMID:18937352 NCBI chr10:88,280,517...88,307,451
Ensembl chr10:88,279,632...88,307,412
JBrowse link
G Piezo1 piezo-type mechanosensitive ion channel component 1 IBA
ISO
PMID:21873635
(MGI:4833892|PMID:20813920)
RGD PMID:20813920, PMID:21873635 MGI:4833892, RGD:13792537 NCBI chr19:55,305,494...55,367,680
Ensembl chr19:55,305,496...55,367,353
JBrowse link
G Piezo2 piezo-type mechanosensitive ion channel component 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:58,353,361...58,728,555
Ensembl chr18:58,354,648...58,499,836
JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting ISO MGI:1857562 (MGI:2449360|PMID:12514735), (MGI:3512725|PMID:15545994) RGD PMID:12514735, PMID:15545994 MGI:2449360, MGI:3512725 NCBI chr10:13,914,057...13,962,008
Ensembl chr10:13,915,214...13,962,008
JBrowse link
G Pkd1l1 polycystin 1 like 1, transient receptor potential channel interacting IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:89,047,949...89,193,579
Ensembl chr14:89,060,447...89,179,507
JBrowse link
G Pkd1l2 polycystin 1 like 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:49,535,122...49,624,291
Ensembl chr19:49,535,792...49,623,758
JBrowse link
G Pkd1l3 polycystin 1 like 3, transient receptor potential channel interacting IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:41,990,249...42,054,390
Ensembl chr19:41,989,650...42,054,018
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel IBA
ISO
PMID:21873635
(MGI:2449360|PMID:12514735)
RGD PMID:12514735, PMID:21873635 MGI:2449360, RGD:13792537 NCBI chr14:6,602,004...6,645,257
Ensembl chr14:6,602,004...6,645,257
JBrowse link
G Pkd2l1 polycystin 2 like 1, transient receptor potential cation channel IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:263,922,201...263,959,318
Ensembl chr 1:263,922,201...263,959,318
JBrowse link
G Pkd2l2 polycystin 2 like 2, transient receptor potential cation channel IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:27,190,661...27,225,488
Ensembl chr18:27,190,974...27,225,488
JBrowse link
G Pkdrej polycystin family receptor for egg jelly IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:126,695,498...126,701,872
Ensembl chr 7:126,695,498...126,701,872
JBrowse link
detection of mechanical stimulus involved in equilibrioception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcdh15 protocadherin related 15 ISO MGI:1856394 (MGI:3616414|PMID:16481439) RGD PMID:16481439 MGI:3616414 NCBI chr20:14,952,213...15,334,745
Ensembl chr20:14,952,213...15,334,745
JBrowse link
G Sox2 SRY-box transcription factor 2 ISO MGI:2447995 (MGI:3578496|PMID:15846349) RGD PMID:15846349 MGI:3578496 NCBI chr 2:121,165,137...121,167,545
Ensembl chr 2:121,165,137...121,167,545
JBrowse link
detection of mechanical stimulus involved in sensory perception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asic2 acid sensing ion channel subunit 2 IEA
ISO
GO_REF:0000107
MGI:2180111 (MGI:2180082|PMID:11069180)
Ensembl
RGD
PMID:11069180 GO_REF:0000107, MGI:2180082 NCBI chr10:68,247,800...69,347,223
Ensembl chr10:68,248,655...68,517,564
JBrowse link
G Asic3 acid sensing ion channel subunit 3 ISO MGI:2429689 (MGI:2155574|PMID:11754838) RGD PMID:11754838 MGI:2155574 NCBI chr 4:7,287,868...7,293,295
Ensembl chr 4:7,288,855...7,292,901
JBrowse link
G Fmr1 FMRP translational regulator 1 IEP RGD PMID:12591163 RGD:11570504 NCBI chr  X:154,684,924...154,722,369
Ensembl chr  X:154,684,935...154,722,314
JBrowse link
G Igf1 insulin-like growth factor 1 IMP RGD PMID:21037532 RGD:8549460 NCBI chr 7:28,412,123...28,491,815
Ensembl chr 7:28,412,198...28,486,609
JBrowse link
G Lhfpl5 LHFPL tetraspan subfamily member 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:5,815,837...5,826,137
Ensembl chr20:5,815,837...5,826,137
JBrowse link
G Piezo2 piezo-type mechanosensitive ion channel component 2 ISO (MGI:5574426|PMID:24717433) RGD PMID:24717433 MGI:5574426 NCBI chr18:58,353,361...58,728,555
Ensembl chr18:58,354,648...58,499,836
JBrowse link
G Serpine2 serpin family E member 2 IEA
ISO
GO_REF:0000107
MGI:2387774 (MGI:3521551|PMID:15509762)
Ensembl
RGD
PMID:15509762 GO_REF:0000107, MGI:3521551 NCBI chr 9:85,560,852...85,629,410
Ensembl chr 9:85,560,863...85,626,094
JBrowse link
detection of mechanical stimulus involved in sensory perception of pain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ano1 anoctamin 1 NOT ISO (MGI:5461590|PMID:22634729) RGD PMID:22634729 MGI:5461590 NCBI chr 1:217,754,349...217,902,540
Ensembl chr 1:217,754,336...217,902,473
JBrowse link
G Asic3 acid sensing ion channel subunit 3 ISO MGI:2429689|MGI:2451051 (MGI:2155574|PMID:11754838), (MGI:2450005|PMID:12060708) RGD PMID:11754838, PMID:12060708 MGI:2155574, MGI:2450005 NCBI chr 4:7,287,868...7,293,295
Ensembl chr 4:7,288,855...7,292,901
JBrowse link
G Bace1 beta-secretase 1 IMP RGD PMID:28012171 RGD:13782150 NCBI chr 8:50,140,092...50,162,388
Ensembl chr 8:50,139,997...50,162,361
JBrowse link
G Cacnb3 calcium voltage-gated channel auxiliary subunit beta 3 IMP RGD PMID:22187436 RGD:13514092 NCBI chr 7:140,311,120...140,324,902
Ensembl chr 7:140,315,368...140,324,902
JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 IMP RGD PMID:27760212 RGD:12910551 NCBI chr 4:149,261,044...149,273,891
Ensembl chr 4:149,261,044...149,273,891
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 IMP RGD PMID:27760212, PMID:28108674 RGD:12910551, RGD:13463594 NCBI chr13:45,314,952...45,318,856
Ensembl chr13:45,314,933...45,318,878
JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase ISO MGI:1930480 (MGI:3604261|PMID:16190898) RGD PMID:16190898 MGI:3604261 NCBI chr20:44,436,354...44,630,316
Ensembl chr20:44,436,403...44,630,317
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A NOT ISO MGI:1928285 (MGI:3604261|PMID:16190898) RGD PMID:16190898 MGI:3604261 NCBI chr10:5,707,806...6,123,568
Ensembl chr10:5,930,298...6,119,990
JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B ISO (MGI:3604261|PMID:16190898) RGD PMID:16190898 MGI:3604261 NCBI chr 4:169,541,620...170,000,216
Ensembl chr 4:169,560,387...169,999,873
JBrowse link
G Grin2d glutamate ionotropic receptor NMDA type subunit 2D NOT ISO MGI:1928298 (MGI:3604261|PMID:16190898) RGD PMID:16190898 MGI:3604261 NCBI chr 1:101,819,068...101,859,146
Ensembl chr 1:101,820,461...101,856,881
JBrowse link
G Grm8 glutamate metabotropic receptor 8 IDA RGD PMID:18533199 RGD:6771181 NCBI chr 4:54,474,344...55,409,526
Ensembl chr 4:54,474,136...55,407,922
JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A IMP RGD PMID:20531396 RGD:7257680 NCBI chr15:56,666,152...56,732,469
Ensembl chr15:56,666,012...56,735,382
JBrowse link
G Htr7 5-hydroxytryptamine receptor 7 IDA RGD PMID:21843960 RGD:6482179 NCBI chr 1:254,547,964...254,671,811
Ensembl chr 1:254,547,620...254,671,778
JBrowse link
G Il18 interleukin 18 IDA RGD PMID:19853379 RGD:2315887 NCBI chr 8:55,009,666...55,016,286
Ensembl chr 8:54,993,859...55,016,299
JBrowse link
G Itga2 integrin subunit alpha 2 IMP RGD PMID:18234883 RGD:2303705 NCBI chr 2:46,996,904...47,097,011
Ensembl chr 2:47,000,323...47,096,961
JBrowse link
G Kcna1 potassium voltage-gated channel subfamily A member 1 ISS
ISO
GO_REF:0000024
(MGI:5494919|PMID:23473320)
UniProt
RGD
PMID:23473320 GO_REF:0000024, MGI:5494919 NCBI chr 4:159,190,781...159,192,526
Ensembl chr 4:159,190,804...159,192,526
JBrowse link
G Mir15b microRNA 15b IDA RGD PMID:28012171 RGD:13782150 NCBI chr 2:165,605,923...165,606,020
Ensembl chr 2:165,605,923...165,606,020
JBrowse link
G Mir338 microRNA 338 IMP RGD PMID:28108674 RGD:13463594 NCBI chr10:109,195,251...109,195,316 JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 IMP RGD PMID:20351485 RGD:5684352 NCBI chr 2:187,143,568...187,160,373
Ensembl chr 2:187,143,568...187,160,373
JBrowse link
G Pawr pro-apoptotic WT1 regulator IDA RGD PMID:21238854 RGD:9835398 NCBI chr 7:51,273,764...51,353,700
Ensembl chr 7:51,273,771...51,353,068
JBrowse link
G Phf24 PHD finger protein 24 ISO MGI:5706936 (MGI:5616490|PMID:25242222) RGD PMID:25242222 MGI:5616490 NCBI chr 5:58,359,744...58,387,446
Ensembl chr 5:58,359,498...58,383,070
JBrowse link
G Scn1a sodium voltage-gated channel alpha subunit 1 IEA
ISO
ISS
GO_REF:0000107
(MGI:5796061|PMID:27281198)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:27281198 GO_REF:0000024, GO_REF:0000107, MGI:5796061 NCBI chr 3:52,388,811...52,533,365
Ensembl chr 3:52,381,975...52,510,507
JBrowse link
G Tlr4 toll-like receptor 4 IMP RGD PMID:27760212 RGD:12910551 NCBI chr 5:82,587,424...82,601,056
Ensembl chr 5:82,587,420...82,601,052
JBrowse link
G Tmem120a transmembrane protein 120A ISS
ISO
GO_REF:0000024
(MGI:6414708|PMID:32084332)
UniProt
RGD
PMID:32084332 GO_REF:0000024, MGI:6414708 NCBI chr12:23,989,596...23,998,257
Ensembl chr12:23,989,596...23,998,254
JBrowse link
G Tnf tumor necrosis factor IMP RGD PMID:16675114 RGD:7387300 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
G Trpa1 transient receptor potential cation channel, subfamily A, member 1 IEA
ISO
GO_REF:0000107
MGI:3624810 (MGI:3623714|PMID:16630838)
Ensembl
RGD
PMID:16630838 GO_REF:0000107, MGI:3623714 NCBI chr 5:3,783,247...3,836,485
Ensembl chr 5:3,783,247...3,836,485
JBrowse link
detection of mechanical stimulus involved in sensory perception of sound term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrv1 adhesion G protein-coupled receptor V1 ISO MGI:3046273 (MGI:3629345|PMID:16775142) RGD PMID:16775142 MGI:3629345 NCBI chr 2:8,926,843...9,504,455
Ensembl chr 2:8,926,850...9,504,134
JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 ISO MGI:1857876 (MGI:3625390|PMID:16529873) RGD PMID:16529873 MGI:3625390 NCBI chr 4:145,704,779...145,948,997
Ensembl chr 4:145,703,046...146,016,325
JBrowse link
G Chrna10 cholinergic receptor nicotinic alpha 10 subunit ISO MGI:3774038 (MGI:3771935|PMID:18077337) RGD PMID:18077337 MGI:3771935 NCBI chr 1:167,206,722...167,212,199
Ensembl chr 1:167,206,722...167,210,919
JBrowse link
G Chrna9 cholinergic receptor nicotinic alpha 9 subunit ISO MGI:2158742 (MGI:3771935|PMID:18077337) RGD PMID:18077337 MGI:3771935 NCBI chr14:43,883,450...43,890,171
Ensembl chr14:43,883,458...43,890,171
JBrowse link
G Col11a1 collagen type XI alpha 1 chain ISO (PMID:10889003) RGD PMID:10889003 NCBI chr 2:216,863,423...217,056,523
Ensembl chr 2:216,863,428...217,056,523
JBrowse link
G Hpn hepsin ISS
ISO
GO_REF:0000024
(MGI:3719967|PMID:17620368), (MGI:5306554|PMID:20683358), (MGI:5308539|PMID:17918732)
UniProt
RGD
PMID:17620368, PMID:17918732, PMID:20683358 GO_REF:0000024, MGI:3719967, MGI:5306554, MGI:5308539 NCBI chr 1:89,534,112...89,549,575
Ensembl chr 1:89,534,106...89,543,967
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase ISO (MGI:3530388|PMID:15731517) RGD PMID:15731517 MGI:3530388 NCBI chr14:35,072,131...35,149,638
Ensembl chr14:35,072,108...35,149,610
JBrowse link
G Lhfpl5 LHFPL tetraspan subfamily member 5 ISO MGI:3718054 (MGI:5468200|PMID:23217710) RGD PMID:23217710 MGI:5468200 NCBI chr20:5,815,837...5,826,137
Ensembl chr20:5,815,837...5,826,137
JBrowse link
G Mkks McKusick-Kaufman syndrome ISO MGI:3608879 (MGI:3607949|PMID:16170314) RGD PMID:16170314 MGI:3607949 NCBI chr 3:129,866,542...129,885,213
Ensembl chr 3:129,866,545...129,884,810
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO MGI:2178233|MGI:2386570 (MGI:3712581|PMID:17523175) RGD PMID:17523175 MGI:3712581 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link
G Pcdh15 protocadherin related 15 ISO MGI:1856394|MGI:5697806 (MGI:3616414|PMID:16481439), (MGI:4950645|PMID:21427143) RGD PMID:16481439, PMID:21427143 MGI:3616414, MGI:4950645 NCBI chr20:14,952,213...15,334,745
Ensembl chr20:14,952,213...15,334,745
JBrowse link
G Pdzd7 PDZ domain containing 7 ISO MGI:4433578 (MGI:5565635|PMID:24334608) RGD PMID:24334608 MGI:5565635 NCBI chr 1:264,776,393...264,796,206
Ensembl chr 1:264,776,398...264,794,938
JBrowse link
G Pjvk pejvakin ISO MGI:3686985|MGI:5925280 (MGI:5907777|PMID:28089576) RGD PMID:28089576 MGI:5907777 NCBI chr 3:63,508,386...63,518,163
Ensembl chr 3:63,510,293...63,518,147
JBrowse link
G Ptprq protein tyrosine phosphatase, receptor type, Q IEA
ISO
GO_REF:0000107
MGI:2679316 (MGI:5315778|PMID:22357859)
Ensembl
RGD
PMID:22357859 GO_REF:0000107, MGI:5315778 NCBI chr 7:49,763,657...50,034,932
Ensembl chr 7:49,763,657...50,034,932
JBrowse link
G Rest RE1-silencing transcription factor ISS
ISO
GO_REF:0000024
(MGI:6193260|PMID:29961578)
UniProt
RGD
PMID:29961578 GO_REF:0000024, MGI:6193260 NCBI chr14:33,131,985...33,152,019
Ensembl chr14:33,134,511...33,164,141
JBrowse link
G Slc12a2 solute carrier family 12 member 2 ISO MGI:1935144 (MGI:3625390|PMID:16529873) RGD PMID:16529873 MGI:3625390 NCBI chr18:52,917,124...52,985,281
Ensembl chr18:52,917,124...52,985,261
JBrowse link
G Sox2 SRY-box transcription factor 2 ISO MGI:2447995 (MGI:3578496|PMID:15846349) RGD PMID:15846349 MGI:3578496 NCBI chr 2:121,165,137...121,167,545
Ensembl chr 2:121,165,137...121,167,545
JBrowse link
G Strc stereocilin ISO MGI:3818633 (MGI:3818235|PMID:18849963) RGD PMID:18849963 MGI:3818235 NCBI chr 3:113,324,403...113,343,513
Ensembl chr 3:113,324,698...113,342,675
JBrowse link
G Tmc1 transmembrane channel-like 1 IBA
ISO
PMID:21873635
MGI:2151017|MGI:5427097 (MGI:5320864|PMID:22105175), (MGI:5515249|PMID:23871232)
RGD PMID:22105175, PMID:23871232, PMID:21873635 MGI:5320864, MGI:5515249, RGD:13792537 NCBI chr 1:238,336,919...238,525,792
Ensembl chr 1:238,336,919...238,441,500
JBrowse link
G Tmc2 transmembrane channel-like 2 ISO
IBA
(PMID:11850618)
MGI:2151016 (MGI:5320864|PMID:22105175)
PMID:21873635
RGD PMID:11850618, PMID:22105175, PMID:21873635 MGI:5320864, RGD:13792537 NCBI chr 3:122,720,769...122,790,100
Ensembl chr 3:122,720,769...122,790,100
JBrowse link
G Whrn whirlin ISS
ISO
IEA
GO_REF:0000024
(MGI:4454934|PMID:20502675)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:20502675 GO_REF:0000024, GO_REF:0000107, MGI:4454934 NCBI chr 5:79,235,541...79,317,206
Ensembl chr 5:79,234,950...79,317,206
JBrowse link
detection of mechanical stimulus involved in sensory perception of touch term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcna1 potassium voltage-gated channel subfamily A member 1 ISS
ISO
GO_REF:0000024
(MGI:5494919|PMID:23473320)
UniProt
RGD
PMID:23473320 GO_REF:0000024, MGI:5494919 NCBI chr 4:159,190,781...159,192,526
Ensembl chr 4:159,190,804...159,192,526
JBrowse link
G Kcnk4 potassium two pore domain channel subfamily K member 4 ISS
ISO
GO_REF:0000024
(MGI:3846268|PMID:19279663)
UniProt
RGD
PMID:19279663 GO_REF:0000024, MGI:3846268 NCBI chr 1:222,182,997...222,192,139
Ensembl chr 1:222,183,276...222,189,604
JBrowse link
detection of muscle stretch term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav3 caveolin 3 ISO (MGI:5613732|PMID:25257915) RGD PMID:25257915 MGI:5613732 NCBI chr 4:144,382,945...144,398,919
Ensembl chr 4:144,382,945...144,398,917
JBrowse link
G Csrp3 cysteine and glycine rich protein 3 ISO
IEA
(PMID:12507422)
(MGI:2447926|PMID:12507422)
GO_REF:0000107
RGD
Ensembl
PMID:12507422 GO_REF:0000107, MGI:2447926 NCBI chr 1:104,147,205...104,166,389
Ensembl chr 1:104,147,206...104,166,367
JBrowse link
G Tcap titin-cap ISO
IBA
(PMID:12507422)
PMID:21873635
RGD PMID:12507422, PMID:21873635 RGD:13792537 NCBI chr10:86,337,705...86,338,414
Ensembl chr10:86,337,728...86,338,411
JBrowse link
G Ttn titin ISO (PMID:18765796) RGD PMID:18765796 NCBI chr 3:63,565,160...63,837,815 JBrowse link
detection of temperature stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ano3 anoctamin 3 IMP RGD PMID:23872594 RGD:9681745 NCBI chr 3:101,843,516...102,203,368
Ensembl chr 3:101,840,630...102,151,489
JBrowse link
G Drgx dorsal root ganglia homeobox IEA
ISO
GO_REF:0000107
MGI:2182636 (MGI:2137781|PMID:11498051)
Ensembl
RGD
PMID:11498051 GO_REF:0000107, MGI:2137781 NCBI chr16:8,823,872...8,853,430
Ensembl chr16:8,823,872...8,853,430
JBrowse link
G Ngfr nerve growth factor receptor ISO MGI:1857226 (MGI:1098517|PMID:1317267) RGD PMID:1317267 MGI:1098517 NCBI chr10:83,389,828...83,408,061
Ensembl chr10:83,389,847...83,408,061
JBrowse link
G Trpm3 transient receptor potential cation channel, subfamily M, member 3 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:239,741,572...240,757,583
Ensembl chr 1:240,355,149...240,757,583
JBrowse link
G Trpm8 transient receptor potential cation channel, subfamily M, member 8 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:95,393,370...95,484,528
Ensembl chr 9:95,398,237...95,482,890
JBrowse link
detection of temperature stimulus involved in sensory perception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asic3 acid sensing ion channel subunit 3 ISO MGI:2429689 (MGI:2155574|PMID:11754838) RGD PMID:11754838 MGI:2155574 NCBI chr 4:7,287,868...7,293,295
Ensembl chr 4:7,288,855...7,292,901
JBrowse link
detection of temperature stimulus involved in sensory perception of pain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora1 adenosine A1 receptor IMP RGD PMID:20065990 RGD:5129094 NCBI chr13:51,042,111...51,076,913
Ensembl chr13:51,042,248...51,076,852
JBrowse link
G Ano1 anoctamin 1 ISO UniProtKB:Q704Y3 (MGI:5461590|PMID:22634729) RGD PMID:22634729 MGI:5461590 NCBI chr 1:217,754,349...217,902,540
Ensembl chr 1:217,754,336...217,902,473
JBrowse link
G Arrb2 arrestin, beta 2 IMP RGD PMID:21926413 RGD:5509871 NCBI chr10:57,040,252...57,048,045
Ensembl chr10:57,040,267...57,048,134
JBrowse link
G Asic3 acid sensing ion channel subunit 3 ISO MGI:2451051 (MGI:2450005|PMID:12060708) RGD PMID:12060708 MGI:2450005 NCBI chr 4:7,287,868...7,293,295
Ensembl chr 4:7,288,855...7,292,901
JBrowse link
G Calca calcitonin-related polypeptide alpha ISO (MGI:3603999|PMID:16118273) RGD PMID:16118273 MGI:3603999 NCBI chr 1:184,184,018...184,188,922
Ensembl chr 1:184,184,020...184,188,911
JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 IMP RGD PMID:27760212 RGD:12910551 NCBI chr 4:149,261,044...149,273,891
Ensembl chr 4:149,261,044...149,273,891
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 IMP RGD PMID:27760212 RGD:12910551 NCBI chr13:45,314,952...45,318,856
Ensembl chr13:45,314,933...45,318,878
JBrowse link
G Ephb1 Eph receptor B1 ISS
ISO
GO_REF:0000024
(MGI:5294537|PMID:19025592)
UniProt
RGD
PMID:19025592 GO_REF:0000024, MGI:5294537 NCBI chr 8:110,376,954...110,813,193
Ensembl chr 8:110,376,954...110,813,000
JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A IMP RGD PMID:20531396 RGD:7257680 NCBI chr15:56,666,152...56,732,469
Ensembl chr15:56,666,012...56,735,382
JBrowse link
G Lxn latexin ISO MGI:3622076 (MGI:3619806|PMID:16469302) RGD PMID:16469302 MGI:3619806 NCBI chr 2:164,628,565...164,634,434
Ensembl chr 2:164,628,566...164,634,434
JBrowse link
G Mmp24 matrix metallopeptidase 24 IEA
ISO
ISS
GO_REF:0000107
(MGI:4361769|PMID:19805319)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:19805319 GO_REF:0000024, GO_REF:0000107, MGI:4361769 NCBI chr 3:151,307,309...151,355,401
Ensembl chr 3:151,310,598...151,355,401
JBrowse link
G Nr2f6 nuclear receptor subfamily 2, group F, member 6 IEA
ISO
GO_REF:0000107
MGI:3574037 (MGI:3530176|PMID:15741322)
Ensembl
RGD
PMID:15741322 GO_REF:0000107, MGI:3530176 NCBI chr16:19,769,968...19,777,414
Ensembl chr16:19,769,968...19,777,414
JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 IMP RGD PMID:20351485 RGD:5684352 NCBI chr 2:187,143,568...187,160,373
Ensembl chr 2:187,143,568...187,160,373
JBrowse link
G Ntsr1 neurotensin receptor 1 IMP RGD PMID:15733655 RGD:9743979 NCBI chr 3:175,982,313...176,046,345
Ensembl chr 3:175,885,894...176,046,345
JBrowse link
G Pawr pro-apoptotic WT1 regulator IDA RGD PMID:17179954 RGD:9835416 NCBI chr 7:51,273,764...51,353,700
Ensembl chr 7:51,273,771...51,353,068
JBrowse link
G Prdm12 PR/SET domain 12 ISO (PMID:26005867) RGD PMID:26005867 NCBI chr 3:10,181,104...10,199,185
Ensembl chr 3:10,181,924...10,196,626
JBrowse link
G Tac1 tachykinin, precursor 1 ISO (PMID:17655832) RGD PMID:17655832 NCBI chr 4:33,638,853...33,646,819
Ensembl chr 4:33,638,709...33,646,819
JBrowse link
G Tac4 tachykinin precursor 4 ISO
IDA
(PMID:17655832) RGD PMID:17655832, PMID:17655832 RGD:14695074 NCBI chr10:83,081,168...83,089,487
Ensembl chr10:83,081,168...83,089,481
JBrowse link
G Tlr4 toll-like receptor 4 IMP RGD PMID:27760212 RGD:12910551 NCBI chr 5:82,587,424...82,601,056
Ensembl chr 5:82,587,420...82,601,052
JBrowse link
G Trpv1 transient receptor potential cation channel, subfamily V, member 1 ISO UniProtKB:Q8BHY3 (MGI:5461590|PMID:22634729) RGD PMID:22634729 MGI:5461590 NCBI chr10:59,799,123...59,824,208
Ensembl chr10:59,799,123...59,824,679
JBrowse link
detection of temperature stimulus involved in thermoception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Opn4 opsin 4 ISO MGI:97914 (MGI:6407235|PMID:31924821) RGD PMID:31924821 MGI:6407235 NCBI chr16:10,943,353...10,966,602
Ensembl chr16:10,943,341...10,952,549
JBrowse link
G Rho rhodopsin ISO MGI:1353425 (MGI:6407235|PMID:31924821) RGD PMID:31924821 MGI:6407235 NCBI chr 4:147,832,136...147,837,298
Ensembl chr 4:147,832,136...147,837,298
JBrowse link
G Trpv1 transient receptor potential cation channel, subfamily V, member 1 ISO (MGI:3834285|PMID:18455988) RGD PMID:18455988 MGI:3834285 NCBI chr10:59,799,123...59,824,208
Ensembl chr10:59,799,123...59,824,679
JBrowse link
detection of UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fech ferrochelatase ISO MGI:2384729 (MGI:2384247|PMID:12149233) RGD PMID:12149233 MGI:2384247 NCBI chr18:59,941,992...59,975,192
Ensembl chr18:59,941,992...59,975,192
JBrowse link
detection of visible light term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpr88 G-protein coupled receptor 88 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:219,258,346...219,263,819
Ensembl chr 2:219,258,347...219,262,901
JBrowse link
G Irx6 iroquois homeobox 6 ISO MGI:5448232 (MGI:5447580|PMID:23172916) RGD PMID:23172916 MGI:5447580 NCBI chr19:15,726,633...15,733,442
Ensembl chr19:15,727,514...15,733,412
JBrowse link
G Opn1mw opsin 1, medium wave sensitive IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:156,569,683...156,589,907
Ensembl chr  X:156,569,683...156,589,907
JBrowse link
G Opn1sw opsin 1, short wave sensitive IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:56,653,840...56,656,980
Ensembl chr 4:56,653,844...56,656,980
JBrowse link
G Opn3 opsin 3 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:93,716,481...93,746,994
Ensembl chr13:93,716,481...93,746,994
JBrowse link
G Opn5 opsin 5 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:21,045,457...21,092,517
Ensembl chr 9:21,045,457...21,093,172
JBrowse link
G Rgr retinal G protein coupled receptor IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr16:14,286,323...14,300,972
Ensembl chr16:14,286,323...14,300,951
JBrowse link
G Rrh retinal pigment epithelium derived rhodopsin homolog IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:235,237,422...235,250,474
Ensembl chr 2:235,237,414...235,249,575
JBrowse link
detection of wounding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxf1 forkhead box F1 ISO MGI:2179135 (MGI:3522465|PMID:12500195) RGD PMID:12500195 MGI:3522465 NCBI chr19:53,012,306...53,016,100
Ensembl chr19:53,012,332...53,016,086
JBrowse link
negative regulation of detection of mechanical stimulus involved in sensory perception of touch term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacnb3 calcium voltage-gated channel auxiliary subunit beta 3 IMP RGD PMID:22187436 RGD:13514092 NCBI chr 7:140,311,120...140,324,902
Ensembl chr 7:140,315,368...140,324,902
JBrowse link
phototransduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arrb1 arrestin, beta 1 ISO MGI:2388373 (MGI:3772638|PMID:11853756) RGD PMID:11853756 MGI:3772638 NCBI chr 1:164,502,099...164,573,947
Ensembl chr 1:164,502,389...164,593,139
JBrowse link
G Asic2 acid sensing ion channel subunit 2 IEA
ISO
GO_REF:0000107
MGI:3043849 (MGI:3042539|PMID:14762118)
Ensembl
RGD
PMID:14762118 GO_REF:0000107, MGI:3042539 NCBI chr10:68,247,800...69,347,223
Ensembl chr10:68,248,655...68,517,564
JBrowse link
G Cabp4 calcium binding protein 4 ISO MGI:3056615 (MGI:3609280|PMID:16249514) RGD PMID:16249514 MGI:3609280 NCBI chr 1:219,383,452...219,388,009
Ensembl chr 1:219,383,452...219,388,009
JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 ISO MGI:3527896 (MGI:3527312|PMID:15634774) RGD PMID:15634774 MGI:3527312 NCBI chr19:10,142,440...10,206,618
Ensembl chr19:10,142,496...10,206,681
JBrowse link
G Gnat1 G protein subunit alpha transducin 1 ISO MGI:2152779 (MGI:1928441|PMID:11095744), (MGI:3609280|PMID:16249514), (MGI:3615719|PMID:15073279), (MGI:3757777|PMID:17881533), (MGI:3772638|PMID:11853756), (MGI:3778702|PMID:18367617) RGD PMID:11095744, PMID:11853756, PMID:15073279, PMID:16249514, PMID:17881533, PMID:18367617 MGI:1928441, MGI:3609280, MGI:3615719, MGI:3757777, MGI:3772638, MGI:3778702 NCBI chr 8:116,433,302...116,438,038
Ensembl chr 8:116,433,302...116,438,038
JBrowse link
G Gnat2 G protein subunit alpha transducin 2 ISO MGI:3588845 (MGI:3761397|PMID:17408617), (MGI:3772743|PMID:18171936) RGD PMID:17408617, PMID:18171936 MGI:3761397, MGI:3772743 NCBI chr 2:210,880,754...210,890,765
Ensembl chr 2:210,880,777...210,889,881
JBrowse link
G Gngt1 G protein subunit gamma transducin 1 ISO MGI:3783323 (MGI:3778702|PMID:18367617) RGD PMID:18367617 MGI:3778702 NCBI chr 4:28,972,339...28,975,419
Ensembl chr 4:28,972,434...28,975,419
JBrowse link
G Gpr88 G-protein coupled receptor 88 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:219,258,346...219,263,819
Ensembl chr 2:219,258,347...219,262,901
JBrowse link
G Guca1a guanylate cyclase activator 1A ISO MGI:2664159 (MGI:2664110|PMID:11493703), (MGI:3584028|PMID:15173221) RGD PMID:11493703, PMID:15173221 MGI:2664110, MGI:3584028 NCBI chr 9:15,609,804...15,620,030
Ensembl chr 9:15,609,804...15,620,029
JBrowse link
G Guca1b guanylate cyclase activator 1B ISO MGI:2664160 (MGI:2664110|PMID:11493703), (MGI:3584028|PMID:15173221) RGD PMID:11493703, PMID:15173221 MGI:2664110, MGI:3584028 NCBI chr 9:15,621,083...15,629,017
Ensembl chr 9:15,621,083...15,629,017
JBrowse link
G Opn1mw opsin 1, medium wave sensitive IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:156,569,683...156,589,907
Ensembl chr  X:156,569,683...156,589,907
JBrowse link
G Opn1sw opsin 1, short wave sensitive IEA
IBA
GO_REF:0000043
PMID:21873635
UniProt PMID:21873635 GO_REF:0000043, RGD:13792537 NCBI chr 4:56,653,840...56,656,980
Ensembl chr 4:56,653,844...56,656,980
JBrowse link
G Opn3 opsin 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:93,716,481...93,746,994
Ensembl chr13:93,716,481...93,746,994
JBrowse link
G Opn4 opsin 4 IDA
ISO
IBA
(MGI:2667269|PMID:12808468)
PMID:21873635
(PMID:15674244)
RGD PMID:12808468, PMID:15674244, PMID:11834834, PMID:21873635 MGI:2667269, RGD:633348, RGD:13792537 NCBI chr16:10,943,353...10,966,602
Ensembl chr16:10,943,341...10,952,549
JBrowse link
G Opn5 opsin 5 IBA
ISO
PMID:21873635
(MGI:6359287|PMID:30936473)
RGD PMID:30936473, PMID:21873635 MGI:6359287, RGD:13792537 NCBI chr 9:21,045,457...21,092,517
Ensembl chr 9:21,045,457...21,093,172
JBrowse link
G Plcb4 phospholipase C, beta 4 NAS RGD PMID:7688223 RGD:633574 NCBI chr 3:128,601,163...128,971,720
Ensembl chr 3:128,756,799...128,971,746
JBrowse link
G Rcvrn recoverin ISO MGI:3584102 (MGI:3584028|PMID:15173221) RGD PMID:15173221 MGI:3584028 NCBI chr10:54,246,250...54,253,996
Ensembl chr10:54,246,250...54,253,996
JBrowse link
G Rgr retinal G protein coupled receptor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:14,286,323...14,300,972
Ensembl chr16:14,286,323...14,300,951
JBrowse link
G Rho rhodopsin IEA
ISO
IBA
GO_REF:0000107
MGI:2181812 (MGI:3655007|PMID:16723493)
PMID:21873635
Ensembl
RGD
PMID:16723493, PMID:21873635 GO_REF:0000107, MGI:3655007, RGD:13792537 NCBI chr 4:147,832,136...147,837,298
Ensembl chr 4:147,832,136...147,837,298
JBrowse link
G Rrh retinal pigment epithelium derived rhodopsin homolog IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:235,237,422...235,250,474
Ensembl chr 2:235,237,414...235,249,575
JBrowse link
phototransduction, UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Opn5 opsin 5 ISO (PMID:22043319)
(MGI:6230806|PMID:22043319)
RGD PMID:22043319 MGI:6230806 NCBI chr 9:21,045,457...21,092,517
Ensembl chr 9:21,045,457...21,093,172
JBrowse link
phototransduction, visible light term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aipl1 aryl hydrocarbon receptor-interacting protein-like 1 ISO MGI:3054784 (MGI:3054118|PMID:15365173) RGD PMID:15365173 MGI:3054118 NCBI chr10:58,599,690...58,631,194
Ensembl chr10:58,599,856...58,608,907
JBrowse link
G Chrm1 cholinergic receptor, muscarinic 1 ISO (PMID:12196552) RGD PMID:12196552 NCBI chr 1:224,869,087...224,885,101
Ensembl chr 1:224,882,439...224,884,205
JBrowse link
G Gnat1 G protein subunit alpha transducin 1 ISO (PMID:17584859) RGD PMID:17584859 NCBI chr 8:116,433,302...116,438,038
Ensembl chr 8:116,433,302...116,438,038
JBrowse link
G Pde6c phosphodiesterase 6C ISO MGI:2657247 (MGI:3655007|PMID:16723493) RGD PMID:16723493 MGI:3655007 NCBI chr 1:256,822,099...256,885,879
Ensembl chr 1:256,822,334...256,877,810
JBrowse link
red, far-red light phototransduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rho rhodopsin IDA RGD PMID:2525480 RGD:6893558 NCBI chr 4:147,832,136...147,837,298
Ensembl chr 4:147,832,136...147,837,298
JBrowse link
regulation of rhodopsin mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aipl1 aryl hydrocarbon receptor-interacting protein-like 1 ISO MGI:3054784|MGI:3054793 (MGI:3054118|PMID:15365173), (MGI:3054134|PMID:15365178) RGD PMID:15365173, PMID:15365178 MGI:3054118, MGI:3054134 NCBI chr10:58,599,690...58,631,194
Ensembl chr10:58,599,856...58,608,907
JBrowse link
G Grk1 G protein-coupled receptor kinase 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:15946941)
Ensembl
UniProt
RGD
PMID:15946941 GO_REF:0000024, GO_REF:0000107 NCBI chr16:81,153,489...81,165,442
Ensembl chr16:81,153,489...81,165,442
JBrowse link
rhodopsin mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnat1 G protein subunit alpha transducin 1 IMP RGD PMID:11931744 RGD:1599009 NCBI chr 8:116,433,302...116,438,038
Ensembl chr 8:116,433,302...116,438,038
JBrowse link
G Grk1 G protein-coupled receptor kinase 1 TAS RGD PMID:9147475 RGD:729748 NCBI chr16:81,153,489...81,165,442
Ensembl chr16:81,153,489...81,165,442
JBrowse link
G Opn4 opsin 4 ISO (MGI:4438311|PMID:19793992) RGD PMID:19793992 MGI:4438311 NCBI chr16:10,943,353...10,966,602
Ensembl chr16:10,943,341...10,952,549
JBrowse link
G Pcp2 Purkinje cell protein 2 ISO MGI:3579782 (MGI:3817370|PMID:18768681) RGD PMID:18768681 MGI:3817370 NCBI chr12:2,172,378...2,174,674
Ensembl chr12:2,172,378...2,174,131
JBrowse link
G Rho rhodopsin IDA RGD PMID:8814134 RGD:6893595 NCBI chr 4:147,832,136...147,837,298
Ensembl chr 4:147,832,136...147,837,298
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    response to stimulus 10580
      detection of stimulus 1738
        detection of external stimulus 138
          detection of gravity + 2
          detection of humidity + 0
          detection of light stimulus + 51
          detection of mechanical stimulus + 68
          detection of temperature stimulus + 28
          detection of wounding + 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.