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ONTOLOGY REPORT - ANNOTATIONS


Term:detection of biotic stimulus
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Accession:GO:0009595 term browser browse the term
Definition:The series of events in which a biotic stimulus, one caused or produced by a living organism, is received and converted into a molecular signal.
Synonyms:related_synonym: perception of biotic stimulus
 alt_id: GO:0009596


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detection of bacterial lipoprotein term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ssc5d scavenger receptor cysteine rich family member with 5 domains JBrowse link 1 72,443,750 72,462,293 RGD:1624291
RGD:1600115
detection of bacterium term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Clec4m C-type lectin domain family 4 member M JBrowse link 12 2,817,633 2,826,303 RGD:1624291
RGD:1600115
G LOC100364500 RT1 class I, locus CE11-like JBrowse link 20 2,704,153 2,707,111 RGD:1624291
G Naip6 NLR family, apoptosis inhibitory protein 6 JBrowse link 2 30,377,505 30,418,578 RGD:1624291
G Nlrc4 NLR family, CARD domain containing 4 JBrowse link 6 22,167,874 22,194,755 RGD:1624291
RGD:13792537
RGD:1600115
G Nod1 nucleotide-binding oligomerization domain containing 1 JBrowse link 4 85,123,965 85,175,206 RGD:1624291
RGD:1600115
G Nod2 nucleotide-binding oligomerization domain containing 2 JBrowse link 19 19,342,061 19,389,366 RGD:1624291
RGD:1600115
G Parg poly (ADP-ribose) glycohydrolase JBrowse link 16 8,350,168 8,457,999 RGD:1624291
G Pglyrp1 peptidoglycan recognition protein 1 JBrowse link 1 79,790,879 79,796,064 RGD:1600115
RGD:13792537
RGD:1624291
G Pglyrp2 peptidoglycan recognition protein 2 JBrowse link 7 14,426,481 14,435,987 RGD:1624291
G Pglyrp3 peptidoglycan recognition protein 3 JBrowse link 2 191,903,626 192,264,872 RGD:1624291
RGD:13792537
G Pglyrp3b peptidoglycan recognition protein 3b JBrowse link 2 191,900,147 191,916,863 RGD:13792537
G Pglyrp4 peptidoglycan recognition protein 4 JBrowse link 2 190,125,655 190,204,230 RGD:1624291
RGD:13792537
G RT1-Db1 RT1 class II, locus Db1 JBrowse link 20 4,087,621 4,097,190 RGD:1624291
detection of cell density by contact stimulus involved in contact inhibition term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Smo smoothened, frizzled class receptor JBrowse link 4 57,019,941 57,041,779 RGD:1624291
RGD:1600115
detection of diacyl bacterial lipopeptide term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tlr2 toll-like receptor 2 JBrowse link 2 182,840,171 182,846,061 RGD:1624291
RGD:1600115
G Tlr6 toll-like receptor 6 JBrowse link 14 45,024,351 45,041,188 RGD:1624291
RGD:1600115
detection of fungus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Clec7a C-type lectin domain containing 7A JBrowse link 4 163,216,152 163,227,367 RGD:1624291
RGD:1600115
detection of lipopolysaccharide term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ly96 lymphocyte antigen 96 JBrowse link 5 1,972,212 1,989,448 RGD:1624291
G Scarb1 scavenger receptor class B, member 1 JBrowse link 12 36,694,952 36,761,445 RGD:1624291
RGD:1600115
G Tlr4 toll-like receptor 4 JBrowse link 5 82,587,424 82,601,056 RGD:1624291
RGD:1600115
G Trem2 triggering receptor expressed on myeloid cells 2 JBrowse link 9 14,611,541 14,618,076 RGD:1624291
detection of lipoteichoic acid term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Trem2 triggering receptor expressed on myeloid cells 2 JBrowse link 9 14,611,541 14,618,076 RGD:1624291
detection of molecule of bacterial origin term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G C4b complement C4B (Chido blood group) JBrowse link 20 4,302,344 4,316,752 RGD:1624291
G Lbp lipopolysaccharide binding protein JBrowse link 3 154,786,232 154,812,910 RGD:1624291
RGD:1600115
detection of molecule of fungal origin term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Clec7a C-type lectin domain containing 7A JBrowse link 4 163,216,152 163,227,367 RGD:1624291
RGD:1600115
detection of muramyl dipeptide term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nod2 nucleotide-binding oligomerization domain containing 2 JBrowse link 19 19,342,061 19,389,366 RGD:1624291
RGD:1600115
detection of peptidoglycan term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Trem2 triggering receptor expressed on myeloid cells 2 JBrowse link 9 14,611,541 14,618,076 RGD:1624291
detection of stimulus involved in cell cycle checkpoint term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Trex1 three prime repair exonuclease 1 JBrowse link 8 117,796,127 117,797,427 RGD:1624291
RGD:1600115
detection of triacyl bacterial lipopeptide term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tlr1 toll-like receptor 1 JBrowse link 14 45,062,662 45,065,014 RGD:1624291
G Tlr2 toll-like receptor 2 JBrowse link 2 182,840,171 182,846,061 RGD:1624291
RGD:1600115
detection of tumor cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Crtam cytotoxic and regulatory T cell molecule JBrowse link 8 45,152,584 45,216,082 RGD:1624291
RGD:1600115
detection of yeast term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Clec4m C-type lectin domain family 4 member M JBrowse link 12 2,817,633 2,826,303 RGD:1624291
RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17967
    response to stimulus 9826
      detection of stimulus 1654
        detection of biotic stimulus 27
          detection of cell density + 1
          detection of endogenous biotic stimulus + 1
          detection of endoplasmic reticulum overloading 0
          detection of external biotic stimulus + 24
          detection of tumor cell 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.