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ONTOLOGY REPORT - ANNOTATIONS


Term:response to virus
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Accession:GO:0009615 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus.
Synonyms:exact_synonym: response to viruses


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response to virus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acta2 actin alpha 2, smooth muscle JBrowse link NW_004955425 4,023,001 4,039,980 RGD:9068941
G Adar adenosine deaminase RNA specific JBrowse link NW_004955545 1,078,319 1,106,938 RGD:9068941
G Ap1s1 adaptor related protein complex 1 subunit sigma 1 JBrowse link NW_004955456 16,127,877 16,134,039 RGD:9068941
G Apob apolipoprotein B JBrowse link NW_004955469 3,437,422 3,478,408 RGD:9068941
G Banf1 BAF nuclear assembly factor 1 JBrowse link NW_004955422 19,337,038 19,338,824 RGD:9068941
G Batf3 basic leucine zipper ATF-like transcription factor 3 JBrowse link NW_004955815 2,852 11,035 RGD:9068941
G Bcl2l1 BCL2 like 1 JBrowse link NW_004955422 29,254,440 29,307,104 RGD:9068941
G Bcl3 BCL3 transcription coactivator JBrowse link NW_004955555 1,898,280 1,911,466 RGD:9068941
G Btbd17 BTB domain containing 17 JBrowse link NW_004955553 1,247,702 1,271,777 RGD:9068941
G Ccdc130 coiled-coil domain containing 130 JBrowse link NW_004955415 32,560,182 32,584,747 RGD:9068941
G Ccl19 C-C motif chemokine ligand 19 JBrowse link NW_004955472 1,444,598 1,446,488 RGD:9068941
G Ccl22 C-C motif chemokine ligand 22 JBrowse link NW_004955433 15,002,001 15,007,324 RGD:9068941
G Ccl5 C-C motif chemokine ligand 5 JBrowse link NW_004955481 10,293,758 10,301,118 RGD:9068941
G Cct5 chaperonin containing TCP1 subunit 5 JBrowse link NW_004955426 132,106 144,251 RGD:9068941
G Cdk6 cyclin dependent kinase 6 JBrowse link NW_004955432 9,521,794 9,727,772 RGD:9068941
G Cfl1 cofilin 1 JBrowse link NW_004955422 19,479,181 19,482,571 RGD:9068941
G Chrm2 cholinergic receptor muscarinic 2 JBrowse link NW_004955494 5,845,581 5,975,614 RGD:9068941
G Chuk component of inhibitor of nuclear factor kappa B kinase complex JBrowse link NW_004955507 6,066,026 6,102,066 RGD:9068941
G Clu clusterin JBrowse link NW_004955403 50,160,598 50,175,876 RGD:9068941
G Crebzf CREB/ATF bZIP transcription factor JBrowse link NW_004955414 7,190,234 7,213,042 RGD:9068941
G Cxcl12 C-X-C motif chemokine ligand 12 JBrowse link NW_004955546 1,929,269 1,941,690 RGD:9068941
G Cxcr4 C-X-C motif chemokine receptor 4 JBrowse link NW_004955440 3,456,165 3,460,024 RGD:9068941
G Dclk1 doublecortin like kinase 1 JBrowse link NW_004955431 9,975,629 10,302,605 RGD:9068941
G Ddx3x DEAD-box helicase 3 X-linked JBrowse link NW_004955565 1,387,043 1,403,624 RGD:9068941
G Ddx58 DExD/H-box helicase 58 JBrowse link NW_004955472 3,093,895 3,135,524 RGD:9068941
G Ddx60 DExD/H-box helicase 60 JBrowse link NW_004955403 37,679,939 37,765,074 RGD:9068941
G Dhx58 DExH-box helicase 58 JBrowse link NW_004955451 16,186,263 16,191,928 RGD:9068941
G Duox2 dual oxidase 2 JBrowse link NW_004955409 8,270,657 8,288,201 RGD:9068941
G Eef1g eukaryotic translation elongation factor 1 gamma JBrowse link NW_004955599 607,021 615,662 RGD:9068941
G Eif2ak2 eukaryotic translation initiation factor 2 alpha kinase 2 JBrowse link NW_004955441 4,908,318 4,944,343 RGD:9068941
G Eno1 enolase 1 JBrowse link NW_004955486 4,275,371 4,287,152 RGD:9068941
G Fgr FGR proto-oncogene, Src family tyrosine kinase JBrowse link NW_004955452 6,840,274 6,863,460 RGD:9068941
G Fosl1 FOS like 1, AP-1 transcription factor subunit JBrowse link NW_004955422 19,425,741 19,431,801 RGD:9068941
G Foxp3 forkhead box P3 JBrowse link NW_004955543 731,707 742,606 RGD:9068941
G Gata3 GATA binding protein 3 JBrowse link NW_004955421 24,448,446 24,477,885 RGD:9068941
G Gtf2f1 general transcription factor IIF subunit 1 JBrowse link NW_004955495 3,208,334 3,217,460 RGD:9068941
G Hmga1 high mobility group AT-hook 1 JBrowse link NW_004955437 2,478,414 2,486,809 RGD:9068941
G Hmga2 high mobility group AT-hook 2 JBrowse link NW_004955458 12,493,790 12,624,805 RGD:9068941
G Hnrnpul1 heterogeneous nuclear ribonucleoprotein U like 1 JBrowse link NW_004955555 219,185 254,979 RGD:9068941
G Hspb1 heat shock protein family B (small) member 1 JBrowse link NW_004955844 8,094 9,565 RGD:9068941
G Hyal1 hyaluronidase 1 JBrowse link NW_004955532 2,113,016 2,116,093 RGD:9068941
G Hyal2 hyaluronidase 2 JBrowse link NW_004955532 2,120,781 2,125,083 RGD:9068941
G Hyal3 hyaluronidase 3 JBrowse link NW_004955532 2,107,019 2,112,356 RGD:9068941
G Ifih1 interferon induced with helicase C domain 1 JBrowse link NW_004955449 11,538,869 11,596,502 RGD:9068941
G Ifit1 interferon induced protein with tetratricopeptide repeats 1 JBrowse link NW_004955425 3,581,705 3,588,528 RGD:9068941
G Ifit2 interferon induced protein with tetratricopeptide repeats 2 JBrowse link NW_004955425 3,685,626 3,692,482 RGD:9068941
G Ifit3 interferon induced protein with tetratricopeptide repeats 3 JBrowse link NW_004955425 3,671,303 3,692,478 RGD:9068941
G Ifnar1 interferon alpha and beta receptor subunit 1 JBrowse link NW_004955407 32,730,973 32,755,404 RGD:9068941
G Ifnar2 interferon alpha and beta receptor subunit 2 JBrowse link NW_004955407 32,601,862 32,637,852 RGD:9068941
G Ifnb1 interferon beta 1 JBrowse link NW_004955434 23,301,623 23,302,304 RGD:9068941
G Ifng interferon gamma JBrowse link NW_004955458 14,643,333 14,648,020 RGD:9068941
G Ifngr1 interferon gamma receptor 1 JBrowse link NW_004955436 22,183,318 22,199,013 RGD:9068941
G Ifngr2 interferon gamma receptor 2 JBrowse link NW_004955407 32,846,927 32,863,155 RGD:9068941
G Ifnk interferon kappa JBrowse link NW_004955472 7,359,453 7,360,055 RGD:9068941
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta JBrowse link NW_004955536 611,965 658,647 RGD:9068941
G Ikbkg inhibitor of nuclear factor kappa B kinase regulatory subunit gamma JBrowse link NW_004955580 1,053,823 1,069,802 RGD:9068941
G Il12a interleukin 12A JBrowse link NW_004955448 10,611,131 10,617,911 RGD:9068941
G Irak3 interleukin 1 receptor associated kinase 3 JBrowse link NW_004955458 12,839,995 12,880,285 RGD:9068941
G Irf7 interferon regulatory factor 7 JBrowse link NW_004955476 11,442,781 11,445,706 RGD:9068941
G Isg20 interferon stimulated exonuclease gene 20 JBrowse link NW_004955416 16,305,534 16,321,596 RGD:9068941
G Ivns1abp influenza virus NS1A binding protein JBrowse link NW_004955406 23,866,705 23,881,184 RGD:9068941
G Lamtor5 late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 JBrowse link NW_004955435 13,896,320 13,900,742 RGD:9068941
G LOC102010850 cytochrome P450 1A1 JBrowse link NW_004955450 3,183,958 3,189,488 RGD:9068941
G Mst1r macrophage stimulating 1 receptor JBrowse link NW_004955532 1,774,726 1,789,662 RGD:9068941
G Myd88 MYD88 innate immune signal transduction adaptor JBrowse link NW_004955427 25,553,589 25,557,654 RGD:9068941
G Npc2 NPC intracellular cholesterol transporter 2 JBrowse link NW_004955523 1,010,976 1,021,048 RGD:9068941
G Oas2 2'-5'-oligoadenylate synthetase 2 JBrowse link NW_004955482 9,365,400 9,386,314 RGD:9068941
G Oas3 2'-5'-oligoadenylate synthetase 3 JBrowse link NW_004955482 9,339,174 9,359,266 RGD:9068941
G Oasl 2'-5'-oligoadenylate synthetase like JBrowse link NW_004955455 10,658,080 10,682,493 RGD:9068941
G Odc1 ornithine decarboxylase 1 JBrowse link NW_004955487 5,603,722 5,608,386 RGD:9068941
G Pim2 Pim-2 proto-oncogene, serine/threonine kinase JBrowse link NW_004955543 444,314 449,201 RGD:9068941
G Prkra protein activator of interferon induced protein kinase EIF2AK2 JBrowse link NW_004955403 18,394,609 18,410,381 RGD:9068941
G Psma2 proteasome 20S subunit alpha 2 JBrowse link NW_004955460 880,795 890,718 RGD:9068941
G Rps15a ribosomal protein S15a JBrowse link NW_004955442 2,530,838 2,535,421 RGD:9068941
G Rsad2 radical S-adenosyl methionine domain containing 2 JBrowse link NW_004955487 1,988,226 2,001,731 RGD:9068941
G Src SRC proto-oncogene, non-receptor tyrosine kinase JBrowse link NW_004955445 19,213,210 19,227,670 RGD:9068941
G Stmn1 stathmin 1 JBrowse link NW_004955452 5,387,696 5,393,337 RGD:9068941
G Tbk1 TANK binding kinase 1 JBrowse link NW_004955458 11,210,120 11,263,632 RGD:9068941
G Tbx21 T-box transcription factor 21 JBrowse link NW_004955451 13,315,237 13,317,888 RGD:9068941
G Tlr8 toll like receptor 8 JBrowse link NW_004955544 302,027 317,110 RGD:9068941
G Tnf tumor necrosis factor JBrowse link NW_004955437 117,267 119,899 RGD:9068941
G Tnfsf4 TNF superfamily member 4 JBrowse link NW_004955406 13,477,077 13,493,309 RGD:9068941
G Uri1 URI1 prefoldin like chaperone JBrowse link NW_004955468 7,651,061 7,718,968 RGD:9068941
G Xcl1 X-C motif chemokine ligand 1 JBrowse link NW_004955462 8,594,416 8,598,101 RGD:9068941
G Xpr1 xenotropic and polytropic retrovirus receptor 1 JBrowse link NW_004955406 19,831,398 19,980,994 RGD:9068941
G Zc3hav1 zinc finger CCCH-type containing, antiviral 1 JBrowse link NW_004955494 3,925,478 3,985,469 RGD:9068941
antiviral innate immune response term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ddx58 DExD/H-box helicase 58 JBrowse link NW_004955472 3,093,895 3,135,524 RGD:9068941
G Rnf135 ring finger protein 135 JBrowse link NW_004955481 7,111,760 7,122,800 RGD:9068941
cellular response to virus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adar adenosine deaminase RNA specific JBrowse link NW_004955545 1,078,319 1,106,938 RGD:9068941
G Arf1 ADP ribosylation factor 1 JBrowse link NW_004955581 319,942 335,112 RGD:9068941
G Ccl19 C-C motif chemokine ligand 19 JBrowse link NW_004955472 1,444,598 1,446,488 RGD:9068941
G Chuk component of inhibitor of nuclear factor kappa B kinase complex JBrowse link NW_004955507 6,066,026 6,102,066 RGD:9068941
G Fmr1 FMRP translational regulator 1 JBrowse link NW_004955498 566,741 594,837 RGD:9068941
G Gbf1 golgi brefeldin A resistant guanine nucleotide exchange factor 1 JBrowse link NW_004955485 8,006,161 8,126,074 RGD:9068941
G Gli2 GLI family zinc finger 2 JBrowse link NW_004955459 8,892,917 9,124,672 RGD:9068941
G Gsdme gasdermin E JBrowse link NW_004955410 26,700,977 26,761,683 RGD:9068941
G Ikbke inhibitor of nuclear factor kappa B kinase subunit epsilon JBrowse link NW_004955406 42,056,014 42,077,701 RGD:9068941
G Il12a interleukin 12A JBrowse link NW_004955448 10,611,131 10,617,911 RGD:9068941
G Irgm immunity related GTPase M JBrowse link NW_004955408 2,338,510 2,344,566 RGD:9068941
G Lgals8 galectin 8 JBrowse link NW_004955492 3,673,233 3,693,777 RGD:9068941
G Lgals9 galectin 9 JBrowse link NW_004955481 5,234,125 5,249,564 RGD:9068941
G Mapk11 mitogen-activated protein kinase 11 JBrowse link NW_004955413 33,287,860 33,293,948 RGD:9068941
G Mapk14 mitogen-activated protein kinase 14 JBrowse link NW_004955437 3,836,331 3,884,083 RGD:9068941
G Mmp12 matrix metallopeptidase 12 JBrowse link NW_004955412 6,045,146 6,057,112 RGD:9068941
G Penk proenkephalin JBrowse link NW_004955454 15,425,712 15,426,685 RGD:9068941
G Riok3 RIO kinase 3 JBrowse link NW_004955402 11,649,160 11,670,010 RGD:9068941
G Rrp1b ribosomal RNA processing 1B JBrowse link NW_004955407 38,553,866 38,577,547 RGD:9068941
G Trim6 tripartite motif containing 6 JBrowse link NW_004955414 21,495,593 21,513,703 RGD:9068941
G Vwce von Willebrand factor C and EGF domains JBrowse link NW_004955511 6,235,934 6,251,186 RGD:9068941
G Zc3h12a zinc finger CCCH-type containing 12A JBrowse link NW_004955452 15,306,398 15,314,959 RGD:9068941
cytoplasmic pattern recognition receptor signaling pathway in response to virus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ddx58 DExD/H-box helicase 58 JBrowse link NW_004955472 3,093,895 3,135,524 RGD:9068941
G Ifih1 interferon induced with helicase C domain 1 JBrowse link NW_004955449 11,538,869 11,596,502 RGD:9068941
defense response to virus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcc9 ATP binding cassette subfamily C member 9 JBrowse link NW_004955413 17,385,966 17,510,220 RGD:9068941
G Abce1 ATP binding cassette subfamily E member 1 JBrowse link NW_004955428 1,029,909 1,058,902 RGD:9068941
G Abcf3 ATP binding cassette subfamily F member 3 JBrowse link NW_004955420 23,271,925 23,280,988 RGD:9068941
G Adar adenosine deaminase RNA specific JBrowse link NW_004955545 1,078,319 1,106,938 RGD:9068941
G Adarb1 adenosine deaminase RNA specific B1 JBrowse link NW_004955407 41,886,286 41,962,846 RGD:9068941
G Aen apoptosis enhancing nuclease JBrowse link NW_004955416 16,328,655 16,338,069 RGD:9068941
G Agbl4 ATP/GTP binding protein like 4 JBrowse link NW_004955464 8,847,401 10,195,184 RGD:9068941
G Agbl5 ATP/GTP binding protein like 5 JBrowse link NW_004955469 9,023,753 9,041,674 RGD:9068941
G Aimp1 aminoacyl tRNA synthetase complex interacting multifunctional protein 1 JBrowse link NW_004955496 3,073,480 3,108,012 RGD:9068941
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 JBrowse link NW_004955413 6,471,933 6,480,475 RGD:9068941
G Atg7 autophagy related 7 JBrowse link NW_004955429 14,076,976 14,301,034 RGD:9068941
G Bcl2 BCL2 apoptosis regulator JBrowse link NW_004955402 46,911,125 47,084,214 RGD:9068941
G Becn1 beclin 1 JBrowse link NW_004955451 16,616,595 16,625,731 RGD:9068941
G Bnip3 BCL2 interacting protein 3 JBrowse link NW_004955477 9,621,812 9,630,406 RGD:9068941
G Bnip3l BCL2 interacting protein 3 like JBrowse link NW_004955403 49,122,408 49,144,162 RGD:9068941
G Bpifa1 BPI fold containing family A member 1 JBrowse link NW_004955422 28,063,077 28,069,939 RGD:9068941
G Card9 caspase recruitment domain family member 9 JBrowse link NW_004955513 4,350,873 4,359,345 RGD:9068941
G Cd207 CD207 molecule JBrowse link NW_004955424 14,355,739 14,361,326 RGD:9068941
G Cd40 CD40 molecule JBrowse link NW_004955445 11,191,817 11,202,156 RGD:9068941
G Cgas cyclic GMP-AMP synthase JBrowse link NW_004955493 8,593,104 8,607,297 RGD:9068941
G Cnot7 CCR4-NOT transcription complex subunit 7 JBrowse link NW_004955463 285,228 306,077 RGD:9068941
G Crcp CGRP receptor component JBrowse link NW_004955456 8,431,161 8,479,866 RGD:9068941
G Cxadr CXADR Ig-like cell adhesion molecule JBrowse link NW_004955407 18,894,853 18,927,129 RGD:9068941
G Cxcl10 C-X-C motif chemokine ligand 10 JBrowse link NW_004955433 748,392 750,890 RGD:9068941
G Cxcl9 C-X-C motif chemokine ligand 9 JBrowse link NW_004955433 724,566 731,945 RGD:9068941
G Ddit4 DNA damage inducible transcript 4 JBrowse link NW_004955437 19,322,407 19,324,562 RGD:9068941
G Ddx1 DEAD-box helicase 1 JBrowse link NW_004955487 9,085,950 9,117,599 RGD:9068941
G Ddx17 DEAD-box helicase 17 JBrowse link NW_004955413 24,646,317 24,664,614 RGD:9068941
G Ddx21 DExD-box helicase 21 JBrowse link NW_004955437 22,050,029 22,071,213 RGD:9068941
G Ddx41 DEAD-box helicase 41 JBrowse link NW_004955408 29,748,091 29,753,610 RGD:9068941
G Ddx58 DExD/H-box helicase 58 JBrowse link NW_004955472 3,093,895 3,135,524 RGD:9068941
G Ddx60 DExD/H-box helicase 60 JBrowse link NW_004955403 37,679,939 37,765,074 RGD:9068941
G Dhx36 DEAH-box helicase 36 JBrowse link NW_004955448 5,634,072 5,676,272 RGD:9068941
G Dhx58 DExH-box helicase 58 JBrowse link NW_004955451 16,186,263 16,191,928 RGD:9068941
G Dmbt1 deleted in malignant brain tumors 1 JBrowse link NW_004955477 863,388 899,703 RGD:9068941
G Dnajc3 DnaJ heat shock protein family (Hsp40) member C3 JBrowse link NW_004955404 14,361,540 14,412,533 RGD:9068941
G Dtx3l deltex E3 ubiquitin ligase 3L JBrowse link NW_004955427 21,806,170 21,812,701 RGD:9068941
G Eif2ak2 eukaryotic translation initiation factor 2 alpha kinase 2 JBrowse link NW_004955441 4,908,318 4,944,343 RGD:9068941
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 JBrowse link NW_004955416 6,897,897 7,005,602 RGD:9068941
G Elmod2 ELMO domain containing 2 JBrowse link NW_004955428 3,289,593 3,308,927 RGD:9068941
G Exoc1 exocyst complex component 1 JBrowse link NW_004955447 15,049,087 15,100,628 RGD:9068941
G Exosc4 exosome component 4 JBrowse link NW_004955454 2,732,308 2,734,398 RGD:9068941
G Exosc5 exosome component 5 JBrowse link NW_004955555 328,130 334,106 RGD:9068941
G F2rl1 F2R like trypsin receptor 1 JBrowse link NW_004955425 24,050,901 24,054,039 RGD:9068941
G Fadd Fas associated via death domain JBrowse link NW_004955422 16,026,323 16,035,808 RGD:9068941
G Fam111a family with sequence similarity 111 member A JBrowse link NW_004955511 3,722,483 3,736,001 RGD:9068941
G Fcn3 ficolin 3 JBrowse link NW_004955452 6,630,548 6,635,334 RGD:9068941
G Flna filamin A JBrowse link NW_004955580 874,233 895,172 RGD:9068941
G G3bp1 G3BP stress granule assembly factor 1 JBrowse link NW_004955408 6,197,988 6,223,135 RGD:9068941
G Gpam glycerol-3-phosphate acyltransferase, mitochondrial JBrowse link NW_004955431 17,291,890 17,363,611 RGD:9068941
G Herc5 HECT and RLD domain containing E3 ubiquitin protein ligase 5 JBrowse link NW_004955474 11,954,915 11,991,849 RGD:9068941
G Hyal2 hyaluronidase 2 JBrowse link NW_004955532 2,120,781 2,125,083 RGD:9068941
G Ifi16 interferon gamma inducible protein 16 JBrowse link NW_004955468 10,828,726 10,845,853 RGD:9068941
G Ifih1 interferon induced with helicase C domain 1 JBrowse link NW_004955449 11,538,869 11,596,502 RGD:9068941
G Ifit1 interferon induced protein with tetratricopeptide repeats 1 JBrowse link NW_004955425 3,581,705 3,588,528 RGD:9068941
G Ifit2 interferon induced protein with tetratricopeptide repeats 2 JBrowse link NW_004955425 3,685,626 3,692,482 RGD:9068941
G Ifit3 interferon induced protein with tetratricopeptide repeats 3 JBrowse link NW_004955425 3,671,303 3,692,478 RGD:9068941
G Ifit5 interferon induced protein with tetratricopeptide repeats 5 JBrowse link NW_004955425 3,569,448 3,575,043 RGD:9068941
G Ifnar2 interferon alpha and beta receptor subunit 2 JBrowse link NW_004955407 32,601,862 32,637,852 RGD:9068941
G Ifnb1 interferon beta 1 JBrowse link NW_004955434 23,301,623 23,302,304 RGD:9068941
G Ifne interferon epsilon JBrowse link NW_004955472 12,795,352 12,801,035 RGD:9068941
G Ifng interferon gamma JBrowse link NW_004955458 14,643,333 14,648,020 RGD:9068941
G Ifngr2 interferon gamma receptor 2 JBrowse link NW_004955407 32,846,927 32,863,155 RGD:9068941
G Ifnk interferon kappa JBrowse link NW_004955472 7,359,453 7,360,055 RGD:9068941
G Ifnlr1 interferon lambda receptor 1 JBrowse link NW_004955452 4,002,389 4,028,193 RGD:9068941
G Il10rb interleukin 10 receptor subunit beta JBrowse link NW_004955407 32,641,097 32,659,360 RGD:9068941
G Il12b interleukin 12B JBrowse link NW_004955408 13,302,506 13,316,300 RGD:9068941
G Il23a interleukin 23 subunit alpha JBrowse link NW_004955458 3,946,964 3,949,180 RGD:9068941
G Il33 interleukin 33 JBrowse link NW_004955434 10,145,449 10,187,595 RGD:9068941
G Il6 interleukin 6 JBrowse link NW_004955410 25,079,835 25,084,390 RGD:9068941
G Ilf3 interleukin enhancer binding factor 3 JBrowse link NW_004955495 1,814,012 1,844,605 RGD:9068941
G Irf1 interferon regulatory factor 1 JBrowse link NW_004955408 3,882,282 3,887,965 RGD:9068941
G Irf2 interferon regulatory factor 2 JBrowse link NW_004955403 24,433,334 24,517,618 RGD:9068941
G Irf3 interferon regulatory factor 3 JBrowse link NW_004955559 1,223,986 1,228,671 RGD:9068941
G Irf7 interferon regulatory factor 7 JBrowse link NW_004955476 11,442,781 11,445,706 RGD:9068941
G Irf9 interferon regulatory factor 9 JBrowse link NW_004955409 36,233,633 36,239,916 RGD:9068941
G Isg15 ISG15 ubiquitin like modifier JBrowse link NW_004955486 9,706,878 9,707,876 RGD:9068941
G Isg20 interferon stimulated exonuclease gene 20 JBrowse link NW_004955416 16,305,534 16,321,596 RGD:9068941
G Itch itchy E3 ubiquitin protein ligase JBrowse link NW_004955422 26,810,829 26,918,517 RGD:9068941
G Itgax integrin subunit alpha X JBrowse link NW_004955493 8,196,593 8,220,296 RGD:9068941
G Lyst lysosomal trafficking regulator JBrowse link NW_004955492 4,161,976 4,371,637 RGD:9068941
G Map3k14 mitogen-activated protein kinase kinase kinase 14 JBrowse link NW_004955451 17,907,800 17,954,821 RGD:9068941
G Mavs mitochondrial antiviral signaling protein JBrowse link NW_004955415 14,691,918 14,704,782 RGD:9068941
G Mov10 Mov10 RISC complex RNA helicase JBrowse link NW_004955435 16,093,471 16,114,735 RGD:9068941
G Ncbp3 nuclear cap binding subunit 3 JBrowse link NW_004955467 13,011,755 13,043,161 RGD:9068941
G Nlrc5 NLR family CARD domain containing 5 JBrowse link NW_004955433 14,670,273 14,752,739 RGD:9068941
G Nlrp3 NLR family pyrin domain containing 3 JBrowse link NW_004955581 597,952 616,903 RGD:9068941
G Nt5c3a 5'-nucleotidase, cytosolic IIIA JBrowse link NW_004955617 240,132 293,278 RGD:9068941
G Oas2 2'-5'-oligoadenylate synthetase 2 JBrowse link NW_004955482 9,365,400 9,386,314 RGD:9068941
G Oas3 2'-5'-oligoadenylate synthetase 3 JBrowse link NW_004955482 9,339,174 9,359,266 RGD:9068941
G Oasl 2'-5'-oligoadenylate synthetase like JBrowse link NW_004955455 10,658,080 10,682,493 RGD:9068941
G Oprk1 opioid receptor kappa 1 JBrowse link NW_004955454 12,741,577 12,751,282 RGD:9068941
G Parp9 poly(ADP-ribose) polymerase family member 9 JBrowse link NW_004955427 21,770,158 21,806,091 RGD:9068941
G Pcbp2 poly(rC) binding protein 2 JBrowse link NW_004955458 747,770 773,885 RGD:9068941
G Pde12 phosphodiesterase 12 JBrowse link NW_004955430 7,272,911 7,277,726 RGD:9068941
G Plscr1 phospholipid scramblase 1 JBrowse link NW_004955474 10,953,381 10,989,100 RGD:9068941
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 JBrowse link NW_004955402 44,005,517 44,010,722 RGD:9068941
G Pml promyelocytic leukemia JBrowse link NW_004955450 3,654,854 3,692,057 RGD:9068941
G Polr3a RNA polymerase III subunit A JBrowse link NW_004955437 14,446,059 14,483,336 RGD:9068941
G Polr3b RNA polymerase III subunit B JBrowse link NW_004955405 40,353,289 40,451,445 RGD:9068941
G Polr3c RNA polymerase III subunit C JBrowse link NW_004955568 242,834 263,053 RGD:9068941
G Polr3d RNA polymerase III subunit D JBrowse link NW_004955403 45,721,266 45,727,214 RGD:9068941
G Polr3e RNA polymerase III subunit E JBrowse link NW_004955493 933,381 962,314 RGD:9068941
G Polr3f RNA polymerase III subunit F JBrowse link NW_004955415 27,022,081 27,036,475 RGD:9068941
G Polr3g RNA polymerase III subunit G JBrowse link NW_004955418 21,116,812 21,149,818 RGD:9068941
G Polr3h RNA polymerase III subunit H JBrowse link NW_004955413 27,065,785 27,072,432 RGD:9068941
G Polr3k RNA polymerase III subunit K JBrowse link NW_004955442 17,101,585 17,106,689 RGD:9068941
G Pqbp1 polyglutamine binding protein 1 JBrowse link NW_004955543 430,324 434,205 RGD:9068941
G Prf1 perforin 1 JBrowse link NW_004955437 20,700,912 20,705,076 RGD:9068941
G Ptprc protein tyrosine phosphatase receptor type C JBrowse link NW_004955406 35,005,577 35,127,395 RGD:9068941
G Rela RELA proto-oncogene, NF-kB subunit JBrowse link NW_004955422 19,602,930 19,612,263 RGD:9068941
G Riok3 RIO kinase 3 JBrowse link NW_004955402 11,649,160 11,670,010 RGD:9068941
G Rnase6 ribonuclease A family member k6 JBrowse link NW_004955550 1,687,068 1,688,160 RGD:9068941
G Rnasel ribonuclease L JBrowse link NW_004955406 21,413,950 21,424,860 RGD:9068941
G Rsad2 radical S-adenosyl methionine domain containing 2 JBrowse link NW_004955487 1,988,226 2,001,731 RGD:9068941
G Rtp4 receptor transporter protein 4 JBrowse link NW_004955420 20,435,924 20,459,440 RGD:9068941
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 JBrowse link NW_004955422 24,714,103 24,780,672 RGD:9068941
G Serinc3 serine incorporator 3 JBrowse link NW_004955445 12,837,616 12,868,631 RGD:9068941
G Serinc5 serine incorporator 5 JBrowse link NW_004955418 29,502,562 29,573,966 RGD:9068941
G Setd2 SET domain containing 2, histone lysine methyltransferase JBrowse link NW_004955420 25,070,626 25,178,410 RGD:9068941
G Shfl shiftless antiviral inhibitor of ribosomal frameshifting JBrowse link NW_004955495 1,431,677 1,437,035 RGD:9068941
G Skp2 S-phase kinase associated protein 2 JBrowse link NW_004955426 20,972,663 20,999,769 RGD:9068941
G Slfn11 schlafen family member 11 JBrowse link NW_004955481 9,885,798 9,900,330 RGD:9068941
G Spon2 spondin 2 JBrowse link NW_004955514 598,840 603,390 RGD:9068941
G Stat1 signal transducer and activator of transcription 1 JBrowse link NW_004955403 8,156,660 8,192,018 RGD:9068941
G Stat2 signal transducer and activator of transcription 2 JBrowse link NW_004955458 3,953,019 3,973,151 RGD:9068941
G Sting1 stimulator of interferon response cGAMP interactor 1 JBrowse link NW_004955418 1,091,022 1,097,064 RGD:9068941
G Tbk1 TANK binding kinase 1 JBrowse link NW_004955458 11,210,120 11,263,632 RGD:9068941
G Ticam1 toll like receptor adaptor molecule 1 JBrowse link NW_004955495 4,197,083 4,204,999 RGD:9068941
G Tlr3 toll like receptor 3 JBrowse link NW_004955403 22,977,882 23,001,392 RGD:9068941
G Tlr7 toll like receptor 7 JBrowse link NW_004955544 424,897 443,562 RGD:9068941
G Tlr8 toll like receptor 8 JBrowse link NW_004955544 302,027 317,110 RGD:9068941
G Tlr9 toll like receptor 9 JBrowse link NW_004955532 3,828,645 3,832,699 RGD:9068941
G Trex1 three prime repair exonuclease 1 JBrowse link NW_004955532 533,877 535,767 RGD:9068941
G Trim11 tripartite motif containing 11 JBrowse link NW_004955581 114,750 123,410 RGD:9068941
G Trim56 tripartite motif containing 56 JBrowse link NW_004955456 16,181,890 16,185,598 RGD:9068941
G Ttc4 tetratricopeptide repeat domain 4 JBrowse link NW_004955464 4,629,061 4,669,054 RGD:9068941
G Unc13d unc-13 homolog D JBrowse link NW_004955506 6,407,073 6,423,406 RGD:9068941
G Unc93b1 unc-93 homolog B1, TLR signaling regulator JBrowse link NW_004955422 17,814,174 17,823,945 RGD:9068941
G Zc3h12a zinc finger CCCH-type containing 12A JBrowse link NW_004955452 15,306,398 15,314,959 RGD:9068941
G Zc3hav1 zinc finger CCCH-type containing, antiviral 1 JBrowse link NW_004955494 3,925,478 3,985,469 RGD:9068941
G Zcchc3 zinc finger CCHC-type containing 3 JBrowse link NW_004955597 194,912 197,697 RGD:9068941
G Zmynd11 zinc finger MYND-type containing 11 JBrowse link NW_004955492 775,501 879,051 RGD:9068941
detection of virus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ddx58 DExD/H-box helicase 58 JBrowse link NW_004955472 3,093,895 3,135,524 RGD:9068941
G Ifih1 interferon induced with helicase C domain 1 JBrowse link NW_004955449 11,538,869 11,596,502 RGD:9068941
G Serinc3 serine incorporator 3 JBrowse link NW_004955445 12,837,616 12,868,631 RGD:9068941
G Serinc5 serine incorporator 5 JBrowse link NW_004955418 29,502,562 29,573,966 RGD:9068941
G Tlr3 toll like receptor 3 JBrowse link NW_004955403 22,977,882 23,001,392 RGD:9068941
G Zcchc3 zinc finger CCHC-type containing 3 JBrowse link NW_004955597 194,912 197,697 RGD:9068941
MDA-5 signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ifih1 interferon induced with helicase C domain 1 JBrowse link NW_004955449 11,538,869 11,596,502 RGD:9068941
G Irf3 interferon regulatory factor 3 JBrowse link NW_004955559 1,223,986 1,228,671 RGD:9068941
G Irf7 interferon regulatory factor 7 JBrowse link NW_004955476 11,442,781 11,445,706 RGD:9068941
negative regulation of defense response to virus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G C1qbp complement C1q binding protein JBrowse link NW_004955467 10,788,142 10,792,272 RGD:9068941
G Fgl2 fibrinogen like 2 JBrowse link NW_004955410 7,899,263 7,903,499 RGD:9068941
G Htra1 HtrA serine peptidase 1 JBrowse link NW_004955477 761,127 808,396 RGD:9068941
G Il2ra interleukin 2 receptor subunit alpha JBrowse link NW_004955421 22,642,004 22,694,729 RGD:9068941
G Ilrun inflammation and lipid regulator with UBA-like and NBR1-like domains JBrowse link NW_004955437 2,697,998 2,769,998 RGD:9068941
G Itch itchy E3 ubiquitin protein ligase JBrowse link NW_004955422 26,810,829 26,918,517 RGD:9068941
G Pcbp2 poly(rC) binding protein 2 JBrowse link NW_004955458 747,770 773,885 RGD:9068941
G Ppm1b protein phosphatase, Mg2+/Mn2+ dependent 1B JBrowse link NW_004955441 11,276,525 11,338,586 RGD:9068941
G Rnf26 ring finger protein 26 JBrowse link NW_004955412 20,415,468 20,418,263 RGD:9068941
G Traf3ip1 TRAF3 interacting protein 1 JBrowse link NW_004955542 2,264,472 2,301,083 RGD:9068941
negative regulation of defense response to virus by host term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mul1 mitochondrial E3 ubiquitin protein ligase 1 JBrowse link NW_004955452 1,059,168 1,066,096 RGD:9068941
G Tarbp2 TARBP2 subunit of RISC loading complex JBrowse link NW_004955458 793,753 798,755 RGD:9068941
negative regulation of MDA-5 signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G C1qbp complement C1q binding protein JBrowse link NW_004955467 10,788,142 10,792,272 RGD:9068941
G Dhx58 DExH-box helicase 58 JBrowse link NW_004955451 16,186,263 16,191,928 RGD:9068941
G Riok3 RIO kinase 3 JBrowse link NW_004955402 11,649,160 11,670,010 RGD:9068941
G Tkfc triokinase and FMN cyclase JBrowse link NW_004955511 6,200,433 6,235,855 RGD:9068941
negative regulation of RIG-I signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G C1qbp complement C1q binding protein JBrowse link NW_004955467 10,788,142 10,792,272 RGD:9068941
G Dhx58 DExH-box helicase 58 JBrowse link NW_004955451 16,186,263 16,191,928 RGD:9068941
G Gpatch3 G-patch domain containing 3 JBrowse link NW_004955452 6,234,241 6,241,949 RGD:9068941
G Nlrx1 NLR family member X1 JBrowse link NW_004955412 20,275,767 20,287,414 RGD:9068941
G Nploc4 NPL4 homolog, ubiquitin recognition factor JBrowse link NW_004955506 1,451,337 1,513,455 RGD:9068941
G Rnf125 ring finger protein 125 JBrowse link NW_004955402 19,276,157 19,310,605 RGD:9068941
G Sec14l1 SEC14 like lipid binding 1 JBrowse link NW_004955506 5,159,090 5,231,827 RGD:9068941
G Ufd1 ubiquitin recognition factor in ER associated degradation 1 JBrowse link NW_004955442 18,548,545 18,568,989 RGD:9068941
negative regulation of viral-induced cytoplasmic pattern recognition receptor signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tspan6 tetraspanin 6 JBrowse link NW_004955503 6,782,264 6,788,533 RGD:9068941
positive regulation of defense response to virus by host term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cgas cyclic GMP-AMP synthase JBrowse link NW_004955493 8,593,104 8,607,297 RGD:9068941
G Creb3 cAMP responsive element binding protein 3 JBrowse link NW_004955472 564,227 568,708 RGD:9068941
G Ddx58 DExD/H-box helicase 58 JBrowse link NW_004955472 3,093,895 3,135,524 RGD:9068941
G Dtx3l deltex E3 ubiquitin ligase 3L JBrowse link NW_004955427 21,806,170 21,812,701 RGD:9068941
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 JBrowse link NW_004955416 6,897,897 7,005,602 RGD:9068941
G Ercc6 ERCC excision repair 6, chromatin remodeling factor JBrowse link NW_004955556 745,175 812,215 RGD:9068941
G Il12b interleukin 12B JBrowse link NW_004955408 13,302,506 13,316,300 RGD:9068941
G Il12rb1 interleukin 12 receptor subunit beta 1 JBrowse link NW_004955524 3,276,932 3,299,617 RGD:9068941
G Il23a interleukin 23 subunit alpha JBrowse link NW_004955458 3,946,964 3,949,180 RGD:9068941
G Il23r interleukin 23 receptor JBrowse link NW_004955423 23,841,342 23,885,191 RGD:9068941
G Il27 interleukin 27 JBrowse link NW_004955493 6,712,005 6,717,417 RGD:9068941
G Mavs mitochondrial antiviral signaling protein JBrowse link NW_004955415 14,691,918 14,704,782 RGD:9068941
G Parp9 poly(ADP-ribose) polymerase family member 9 JBrowse link NW_004955427 21,770,158 21,806,091 RGD:9068941
G Pml promyelocytic leukemia JBrowse link NW_004955450 3,654,854 3,692,057 RGD:9068941
G Pqbp1 polyglutamine binding protein 1 JBrowse link NW_004955543 430,324 434,205 RGD:9068941
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 JBrowse link NW_004955435 17,082,762 17,139,067 RGD:9068941
G Selenok selenoprotein K JBrowse link NW_004955430 3,870,925 3,876,636 RGD:9068941
G Sin3a SIN3 transcription regulator family member A JBrowse link NW_004955450 2,804,551 2,870,450 RGD:9068941
G Stat1 signal transducer and activator of transcription 1 JBrowse link NW_004955403 8,156,660 8,192,018 RGD:9068941
G Sting1 stimulator of interferon response cGAMP interactor 1 JBrowse link NW_004955418 1,091,022 1,097,064 RGD:9068941
G Traf3ip2 TRAF3 interacting protein 2 JBrowse link NW_004955411 36,328,152 36,363,614 RGD:9068941
G Trim44 tripartite motif containing 44 JBrowse link NW_004955422 10,580,002 10,690,349 RGD:9068941
G Trim6 tripartite motif containing 6 JBrowse link NW_004955414 21,495,593 21,513,703 RGD:9068941
G Zc3h12a zinc finger CCCH-type containing 12A JBrowse link NW_004955452 15,306,398 15,314,959 RGD:9068941
positive regulation of MDA-5 signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ankrd17 ankyrin repeat domain 17 JBrowse link NW_004955447 259,654 376,147 RGD:9068941
G Ddx60 DExD/H-box helicase 60 JBrowse link NW_004955403 37,679,939 37,765,074 RGD:9068941
G Dhx58 DExH-box helicase 58 JBrowse link NW_004955451 16,186,263 16,191,928 RGD:9068941
positive regulation of RIG-I signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ankrd17 ankyrin repeat domain 17 JBrowse link NW_004955447 259,654 376,147 RGD:9068941
G Ddx60 DExD/H-box helicase 60 JBrowse link NW_004955403 37,679,939 37,765,074 RGD:9068941
G Dhx58 DExH-box helicase 58 JBrowse link NW_004955451 16,186,263 16,191,928 RGD:9068941
G Pum1 pumilio RNA binding family member 1 JBrowse link NW_004955452 9,487,725 9,623,565 RGD:9068941
G Pum2 pumilio RNA binding family member 2 JBrowse link NW_004955469 2,810,825 2,886,911 RGD:9068941
G Trim15 tripartite motif containing 15 JBrowse link NW_004955583 277,564 283,422 RGD:9068941
G Usp15 ubiquitin specific peptidase 15 JBrowse link NW_004955458 9,440,645 9,533,653 RGD:9068941
G Zc3hav1 zinc finger CCCH-type containing, antiviral 1 JBrowse link NW_004955494 3,925,478 3,985,469 RGD:9068941
G Zcchc3 zinc finger CCHC-type containing 3 JBrowse link NW_004955597 194,912 197,697 RGD:9068941
regulation of defense response to virus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Elmod2 ELMO domain containing 2 JBrowse link NW_004955428 3,289,593 3,308,927 RGD:9068941
G Herc5 HECT and RLD domain containing E3 ubiquitin protein ligase 5 JBrowse link NW_004955474 11,954,915 11,991,849 RGD:9068941
G Ifit1 interferon induced protein with tetratricopeptide repeats 1 JBrowse link NW_004955425 3,581,705 3,588,528 RGD:9068941
G Traf3 TNF receptor associated factor 3 JBrowse link NW_004955538 1,954,152 2,013,367 RGD:9068941
G Tspan32 tetraspanin 32 JBrowse link NW_004955422 14,101,833 14,121,784 RGD:9068941
G Zmpste24 zinc metallopeptidase STE24 JBrowse link NW_004955537 82,724 134,609 RGD:9068941
regulation of defense response to virus by host term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dhx9 DExH-box helicase 9 JBrowse link NW_004955406 21,697,813 21,743,551 RGD:9068941
G Ifnlr1 interferon lambda receptor 1 JBrowse link NW_004955452 4,002,389 4,028,193 RGD:9068941
G Il15 interleukin 15 JBrowse link NW_004955471 1,496,352 1,583,919 RGD:9068941
G Il1b interleukin 1 beta JBrowse link NW_004955470 1,486,936 1,491,888 RGD:9068941
G Mmp12 matrix metallopeptidase 12 JBrowse link NW_004955412 6,045,146 6,057,112 RGD:9068941
G Rnf216 ring finger protein 216 JBrowse link NW_004955460 10,423,736 10,578,421 RGD:9068941
G Tnfaip3 TNF alpha induced protein 3 JBrowse link NW_004955436 21,566,591 21,581,551 RGD:9068941
regulation of RIG-I signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Birc2 baculoviral IAP repeat containing 2 JBrowse link NW_004955412 5,658,322 5,685,628 RGD:9068941
G Birc3 baculoviral IAP repeat containing 3 JBrowse link NW_004955412 5,624,865 5,643,520 RGD:9068941
G Nop53 NOP53 ribosome biogenesis factor JBrowse link NW_004955574 1,505,997 1,514,680 RGD:9068941
RIG-I signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ddx58 DExD/H-box helicase 58 JBrowse link NW_004955472 3,093,895 3,135,524 RGD:9068941
G Lsm14a LSM14A mRNA processing body assembly factor JBrowse link NW_004955468 3,799,897 3,863,241 RGD:9068941
G Rnf135 ring finger protein 135 JBrowse link NW_004955481 7,111,760 7,122,800 RGD:9068941
G Trim25 tripartite motif containing 25 JBrowse link NW_004955451 5,918,287 5,934,252 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 14546
    interspecies interaction between organisms 1762
      response to other organism 1139
        response to virus 268
          cellular response to virus + 50
          defense response to virus + 192
          detection of virus 6
          killing by virus of host cell during superinfection exclusion 0
Path 2
Term Annotations click to browse term
  biological_process 14546
    response to stimulus 7768
      response to external stimulus 2404
        response to external biotic stimulus 1141
          response to other organism 1139
            response to virus 268
              cellular response to virus + 50
              defense response to virus + 192
              detection of virus 6
              killing by virus of host cell during superinfection exclusion 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.