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ONTOLOGY REPORT - ANNOTATIONS


Term:response to bacterium
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Accession:GO:0009617 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium.
Synonyms:exact_synonym: response to bacteria
 alt_id: GO:0009618;   GO:0009680


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response to bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd2 ATP binding cassette subfamily D member 2 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936607:1,292,964...1,345,671 JBrowse link
G Acod1 aconitate decarboxylase 1 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936511:4,322,198...4,326,562 JBrowse link
G Adamts9 ADAM metallopeptidase with thrombospondin type 1 motif 9 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936637:1,787,987...1,946,250 JBrowse link
G Adgrl2 adhesion G protein-coupled receptor L2 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936608:3,465,889...3,678,575 JBrowse link
G Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide ISO (PMID:11410738) UniProtKB PMID:11410738 NCBI chrNW_004936520:3,467,003...3,489,754 JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936578:3,168,599...3,179,369 JBrowse link
G Adipor2 adiponectin receptor 2 ISO RGD PMID:23797890 RGD:25330096 NCBI chrNW_004936606:1,911,104...2,007,109 JBrowse link
G Alpk1 alpha kinase 1 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936563:3,233,913...3,296,671 JBrowse link
G B3galt5 beta-1,3-galactosyltransferase 5 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936500:3,613,910...3,621,119 JBrowse link
G Baiap2 BAR/IMD domain containing adaptor protein 2 ISO (PMID:19366662) UniProtKB PMID:19366662 NCBI chrNW_004936594:4,797,068...4,863,409 JBrowse link
G Baiap2l1 BAR/IMD domain containing adaptor protein 2 like 1 ISO (PMID:19366662) UniProtKB PMID:19366662 NCBI chrNW_004936750:829,188...918,316 JBrowse link
G Bank1 B cell scaffold protein with ankyrin repeats 1 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936520:1,207,078...1,284,679 JBrowse link
G Bmp2 bone morphogenetic protein 2 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936485:12,428,765...12,439,570 JBrowse link
G Bnip3 BCL2 interacting protein 3 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936486:18,449,371...18,460,435 JBrowse link
G C3 complement C3 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936588:3,985,732...4,023,221 JBrowse link
G Ca3 carbonic anhydrase 3 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936544:337,437...347,760 JBrowse link
G Ca5b carbonic anhydrase 5B ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936470:5,184,489...5,227,855 JBrowse link
G Cav1 caveolin 1 ISO (PMID:24625804) AgBase PMID:24625804 NCBI chrNW_004936589:2,504,235...2,536,778 JBrowse link
G Ccdc186 coiled-coil domain containing 186 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936486:4,466,036...4,511,690 JBrowse link
G Ccdc80 coiled-coil domain containing 80 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936536:294,650...330,875 JBrowse link
G Ccl5 C-C motif chemokine ligand 5 ISO uropathogenic E. coli RGD PMID:18390738 RGD:4890031 NCBI chrNW_004936490:253,279...259,947 JBrowse link
G Ccr4 C-C motif chemokine receptor 4 ISO Mycobacterium butyricum adjuvant RGD PMID:14727120 RGD:2306305 NCBI chrNW_004936473:23,321,167...23,323,075 JBrowse link
G Cd14 CD14 molecule ISO (MGI:5448596|PMID:23012479)
(MGI:80217|PMID:8612135)
MGI
UniProt
PMID:8612135 PMID:23012479 MGI:5448596 MGI:80217 NCBI chrNW_004936531:9,572,392...9,575,771 JBrowse link
G Cd36 CD36 molecule ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936810:791,823...838,303 JBrowse link
G Cd40 CD40 molecule ISO Borrelia bavariensis RGD PMID:22355605 RGD:7248752 NCBI chrNW_004936514:6,936,915...6,947,246 JBrowse link
G Cd47 CD47 molecule ISO (MGI:1858867|PMID:10816079) MGI PMID:10816079 MGI:1858867 NCBI chrNW_004936645:1,363,406...1,408,624 JBrowse link
G Cd79b CD79b molecule ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936541:4,534,233...4,537,448 JBrowse link
G Ceacam20 CEA cell adhesion molecule 20 ISO (PMID:25908210) UniProtKB PMID:25908210 NCBI chrNW_004936706:1,286,911...1,298,129 JBrowse link
G Cep192 centrosomal protein 192 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936626:2,565,302...2,659,863 JBrowse link
G Cfd complement factor D ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936588:350,925...352,732 JBrowse link
G Cflar CASP8 and FADD like apoptosis regulator ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936726:381,888...425,565 JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936496:12,381,225...12,505,121 JBrowse link
G Clps colipase ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936476:23,502,923...23,505,664 JBrowse link
G Cubn cubilin ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936520:10,140,784...10,410,082 JBrowse link
G CUNH15orf48 chromosome unknown C15orf48 homolog ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936471:8,086,731...8,090,540 JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936676:60,869...63,028 JBrowse link
G Cxcl9 C-X-C motif chemokine ligand 9 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936676:33,580...40,323 JBrowse link
G Defb1 defensin beta 1 ISO (PMID:12054642)
(MGI:2179639|PMID:12010999)
UniProtKB
UniProt
PMID:12010999 PMID:12054642 MGI:2179639 NCBI chrNW_004936615:4,780,229...4,790,516 JBrowse link
G Dgkb diacylglycerol kinase beta ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936546:964,387...1,615,928 JBrowse link
G Dhx58 DExH-box helicase 58 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936490:16,940,776...16,949,836 JBrowse link
G Dmbt1 deleted in malignant brain tumors 1 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936486:11,377,485...11,545,624 JBrowse link
G Fabp4 fatty acid binding protein 4 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936656:2,722,970...2,727,383 JBrowse link
G Fam20a FAM20A golgi associated secretory pathway pseudokinase ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936541:7,867,856...7,916,145 JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb ISO (MGI:3608295|PMID:12385742) MGI PMID:12385742 MGI:3608295 NCBI chrNW_004937131:80,014...96,114 JBrowse link
G Fer1l6 fer-1 like family member 6 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936470:23,430,982...23,544,510 JBrowse link
G Fgf19 fibroblast growth factor 19 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936599:923,943...932,428 JBrowse link
G Fkbp5 FKBP prolyl isomerase 5 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936476:23,611,166...23,702,283 JBrowse link
G Fuca2 alpha-L-fucosidase 2 ISO (PMID:19666478) UniProtKB PMID:19666478 NCBI chrNW_004936625:2,636,136...2,653,328 JBrowse link
G Gas2l3 growth arrest specific 2 like 3 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936492:13,273,600...13,305,642 JBrowse link
G Gkn2 gastrokine 2 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936491:13,233,729...13,238,305 JBrowse link
G Gpc3 glypican 3 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936691:1,060,013...1,459,736 JBrowse link
G Gpm6a glycoprotein M6A ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936516:6,339,058...6,647,412 JBrowse link
G Hmcn1 hemicentin 1 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936481:4,212,713...4,494,469 JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 ISO RGD PMID:14686922 RGD:2326119 NCBI chrNW_004936627:4,451,847...4,473,163 JBrowse link
G Ifi44 interferon induced protein 44 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936571:5,381,312...5,395,455 JBrowse link
G Ifit3 interferon induced protein with tetratricopeptide repeats 3 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936601:4,914,868...4,919,637 JBrowse link
G Ikzf3 IKAROS family zinc finger 3 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936490:14,939,693...15,025,728 JBrowse link
G Il27 interleukin 27 ISO RGD PMID:16288719 RGD:5128497 NCBI chrNW_004936501:11,972,715...11,978,152 JBrowse link
G Irf3 interferon regulatory factor 3 ISO (MGI:3530402|PMID:15661922) MGI PMID:15661922 MGI:3530402 NCBI chrNW_004936664:3,477,750...3,482,489 JBrowse link
G Irf8 interferon regulatory factor 8 ISO (MGI:3653161|PMID:9348310) MGI PMID:9348310 MGI:3653161 NCBI chrNW_004936641:2,608,109...2,622,446 JBrowse link
G Irgm immunity related GTPase M ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936504:4,055,091...4,056,089 JBrowse link
G Isg15 ISG15 ubiquitin like modifier ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936737:2,043,383...2,044,761 JBrowse link
G Klhl6 kelch like family member 6 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936578:6,226,533...6,284,343 JBrowse link
G Kyat1 kynurenine aminotransferase 1 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936487:16,299,054...16,344,587 JBrowse link
G Lcn2 lipocalin 2 ISO E. coli
(MGI:5448596|PMID:23012479)
RGD
MGI
PMID:19303090 PMID:23012479 MGI:5448596 RGD:2316497 NCBI chrNW_004936487:15,721,752...15,725,396 JBrowse link
G LOC101973029 cytochrome P450 2E1 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936486:19,691,822...19,702,684 JBrowse link
G LOC101973678 inactive N-acetylated-alpha-linked acidic dipeptidase-like protein 2 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936703:2,438,002...2,460,920 JBrowse link
G LOC101973966 pancreatic alpha-amylase ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936730:1,159,622...1,166,865 JBrowse link
G LOC101976500 haptoglobin ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936475:21,841,054...21,845,821 JBrowse link
G LOC101977071 sialin ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936859:668,900...684,207 JBrowse link
G Lpl lipoprotein lipase ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936555:4,084,099...4,108,219 JBrowse link
G Lrat lecithin retinol acyltransferase ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936576:1,491,480...1,498,568 JBrowse link
G Lrg1 leucine rich alpha-2-glycoprotein 1 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936588:2,638,597...2,640,856 JBrowse link
G Lsm5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936478:8,541,293...8,545,280 JBrowse link
G Ly6g6c lymphocyte antigen 6 family member G6C ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936727:1,812,328...1,815,242 JBrowse link
G Macrod2 mono-ADP ribosylhydrolase 2 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936485:3,917,060...5,859,527 JBrowse link
G Mecom MDS1 and EVI1 complex locus ISO (MGI:3686680|PMID:17029558) MGI PMID:17029558 MGI:3686680 NCBI chrNW_004936593:2,742,236...3,282,596 JBrowse link
G Mlh1 mutL homolog 1 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936473:26,556,636...26,600,830 JBrowse link
G Ms4a1 membrane spanning 4-domains A1 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936581:2,466,294...2,477,530 JBrowse link
G Myo1f myosin IF ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936588:5,299,977...5,331,065 JBrowse link
G Ncf1 neutrophil cytosolic factor 1 ISO (MGI:1353689|PMID:10678931) MGI PMID:10678931 MGI:1353689 NCBI chrNW_004936543:3,617,369...3,630,990 JBrowse link
G Nexn nexilin F-actin binding protein ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936571:4,704,009...4,728,305 JBrowse link
G Nfib nuclear factor I B ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936539:7,763,036...8,185,001 JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 ISO RGD PMID:15777838 RGD:1582596 NCBI chrNW_004936520:733,760...850,563 JBrowse link
G Nlrc5 NLR family CARD domain containing 5 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936475:9,137,929...9,218,682 JBrowse link
G Nlrp6 NLR family pyrin domain containing 6 ISO (MGI:5444766|PMID:23075849), (MGI:5492275|PMID:23696660), (MGI:5577214|PMID:24581500) MGI PMID:23075849 PMID:23696660 PMID:24581500 MGI:5444766 MGI:5492275 MGI:5577214 NCBI chrNW_004936888:145,642...151,716 JBrowse link
G Nos2 nitric oxide synthase 2 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936538:4,052,277...4,097,051 JBrowse link
G Ociad2 OCIA domain containing 2 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936482:14,817,008...14,834,454 JBrowse link
G P2rx7 purinergic receptor P2X 7 ISO (MGI:3575403|PMID:10395640) MGI PMID:10395640 MGI:3575403 NCBI chrNW_004936558:3,106,819...3,149,689 JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936530:361,872...367,005 JBrowse link
G Penk proenkephalin ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936496:3,016,247...3,021,726 JBrowse link
G Pglyrp1 peptidoglycan recognition protein 1 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936706:2,317,137...2,320,993 JBrowse link
G Plaat3 phospholipase A and acyltransferase 3 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936599:5,509,723...5,524,837 JBrowse link
G Pmp22 peripheral myelin protein 22 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936724:1,747,015...1,780,298 JBrowse link
G Ppm1d protein phosphatase, Mg2+/Mn2+ dependent 1D ISO (MGI:2158022|PMID:11809801) MGI PMID:11809801 MGI:2158022 NCBI chrNW_004936490:2,139,201...2,183,850 JBrowse link
G Prlr prolactin receptor ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936518:6,352,133...6,495,242 JBrowse link
G Psmb9 proteasome 20S subunit beta 9 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936476:25,894,313...25,899,132 JBrowse link
G Pycard PYD and CARD domain containing ISO (MGI:5577214|PMID:24581500) MGI PMID:24581500 MGI:5577214 NCBI chrNW_004936501:13,550,702...13,552,774 JBrowse link
G Pygl glycogen phosphorylase L ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936495:14,692,688...14,728,663 JBrowse link
G Rab29 RAB29, member RAS oncogene family ISO (PMID:22042847) ParkinsonsUK-UCL PMID:22042847 NCBI chrNW_004936557:6,673,092...6,679,715 JBrowse link
G Reg3g regenerating family member 3 gamma ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936556:4,896,141...4,898,240 JBrowse link
G Reg4 regenerating family member 4 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936627:4,512,726...4,520,080 JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit ISO (MGI:3530402|PMID:15661922) MGI PMID:15661922 MGI:3530402 NCBI chrNW_004936599:3,800,142...3,810,583 JBrowse link
G Resf1 retroelement silencing factor 1 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936607:4,247,824...4,274,410 JBrowse link
G Retnlb resistin like beta ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936645:2,400,948...2,403,714 JBrowse link
G Rgs1 regulator of G protein signaling 1 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936638:879,241...883,423 JBrowse link
G Rnf5 ring finger protein 5 ISO (MGI:5469257|PMID:23093945) MGI PMID:23093945 MGI:5469257 NCBI chrNW_004936727:1,422,207...1,424,808 JBrowse link
G Scn7a sodium voltage-gated channel alpha subunit 7 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936469:12,862,314...12,946,784 JBrowse link
G Slc10a2 solute carrier family 10 member 2 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936472:8,052,789...8,069,085 JBrowse link
G Slc11a1 solute carrier family 11 member 1 ISO (PMID:7717395)
(MGI:53244|PMID:8490962)
UniProtKB
MGI
PMID:7717395 PMID:8490962 MGI:53244 NCBI chrNW_004936569:888,309...895,991 JBrowse link
G Snx3 sorting nexin 3 ISO (PMID:20482551) UniProtKB PMID:20482551 NCBI chrNW_004936564:4,472,171...4,520,732 JBrowse link
G Socs3 suppressor of cytokine signaling 3 ISO RGD PMID:17405912 RGD:1625683 NCBI chrNW_004936594:2,932,297...2,935,358 JBrowse link
G St13 ST13 Hsp70 interacting protein ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936492:976,928...1,010,748 JBrowse link
G Stap1 signal transducing adaptor family member 1 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936582:877,241...908,697 JBrowse link
G Stat1 signal transducer and activator of transcription 1 ISO (MGI:3530402|PMID:15661922) MGI PMID:15661922 MGI:3530402 NCBI chrNW_004936506:7,196,860...7,235,854 JBrowse link
G Stox2 storkhead box 2 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936554:5,148,453...5,256,514 JBrowse link
G Tent5a terminal nucleotidyltransferase 5A ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936510:8,813,977...8,820,909 JBrowse link
G Tf transferrin ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936529:6,856,042...6,895,989 JBrowse link
G Thrsp thyroid hormone responsive ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936498:6,622,007...6,624,961 JBrowse link
G Tlr2 toll like receptor 2 ISO (MGI:3814295|PMID:17114491) MGI PMID:17114491 MGI:3814295 NCBI chrNW_004936576:522,234...531,660 JBrowse link
G Tlr4 toll like receptor 4 ISO (MGI:3608578|PMID:11294571) MGI PMID:11294571 MGI:3608578 NCBI chrNW_004936487:6,519,140...6,532,018 JBrowse link
G Tmem229b transmembrane protein 229B ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936495:10,858,641...10,900,379 JBrowse link
G Tmem255a transmembrane protein 255A ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936479:9,721,602...9,781,468 JBrowse link
G Tnf tumor necrosis factor ISO Escherichia coli serotype 055:B5 RGD PMID:8769813 RGD:14995453 NCBI chrNW_004936727:1,936,066...1,937,766 JBrowse link
G Tnnt2 troponin T2, cardiac type ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936567:3,052,167...3,069,077 JBrowse link
G Trdn triadin ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936802:389,653...637,372 JBrowse link
G Upk1b uroplakin 1B ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936536:6,178,159...6,208,273 JBrowse link
G Usp18 ubiquitin specific peptidase 18 ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936807:1,090,928...1,116,166 JBrowse link
G Vegfd vascular endothelial growth factor D ISO (MGI:5448596|PMID:23012479) MGI PMID:23012479 MGI:5448596 NCBI chrNW_004936470:4,761,827...4,794,751 JBrowse link
G Vil1 villin 1 ISO (PMID:17182858) UniProtKB PMID:17182858 NCBI chrNW_004936569:914,511...938,481 JBrowse link
G Wasl WASP like actin nucleation promoting factor ISO (MGI:2156091|PMID:11559594) MGI PMID:11559594 MGI:2156091 NCBI chrNW_004936605:1,741,832...1,816,694 JBrowse link
antibacterial humoral response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adm adrenomedullin ISO (PMID:10225288) UniProt PMID:10225288 NCBI chrNW_004936528:8,005,223...8,007,586 JBrowse link
G Ang angiogenin ISO (PMID:12548285)
(MGI:2652649|PMID:12548285)
UniProt PMID:12548285 MGI:2652649 NCBI chrNW_004936880:39,372...40,070 JBrowse link
G App amyloid beta precursor protein ISO PMID:20209079
(PMID:20209079)
UniProt PMID:20209079 RGD:10400853 NCBI chrNW_004936640:1,549,977...1,787,436 JBrowse link
G B2m beta-2-microglobulin ISO (PMID:23144825) UniProt PMID:23144825 NCBI chrNW_004936471:7,646,504...7,655,656 JBrowse link
G Bpi bactericidal permeability increasing protein ISO (PMID:1937776) UniProt PMID:1937776 NCBI chrNW_004936561:3,043,520...3,069,680 JBrowse link
G Defb1 defensin beta 1 ISO (PMID:12860195) UniProtKB PMID:12860195 NCBI chrNW_004936615:4,780,229...4,790,516 JBrowse link
G Fau FAU ubiquitin like and ribosomal protein S30 fusion ISO (PMID:12860195) UniProtKB PMID:12860195 NCBI chrNW_004936599:4,246,681...4,248,142 JBrowse link
G Jchain joining chain of multimeric IgA and IgM ISO (PMID:23250751) UniProtKB PMID:23250751 NCBI chrNW_004936598:4,061,827...4,140,895 JBrowse link
G LOC101967584 histone H2B type 2-E ISO (PMID:12860195) UniProtKB PMID:12860195 NCBI chrNW_004936580:217,772...220,559 JBrowse link
G Ltf lactotransferrin ISO (PMID:1599934), (PMID:18714013) UniProtKB PMID:1599934 PMID:18714013 NCBI chrNW_004936596:344,287...373,788 JBrowse link
G Npy neuropeptide Y ISO (PMID:18603306) UniProt PMID:18603306 NCBI chrNW_004936478:1,289,437...1,296,819 JBrowse link
G Pla2g1b phospholipase A2 group IB ISO (PMID:12860195) UniProtKB PMID:12860195 NCBI chrNW_004936668:608,848...616,982 JBrowse link
G Pla2g6 phospholipase A2 group VI ISO (PMID:18714013) UniProtKB PMID:18714013 NCBI chrNW_004936492:3,011,752...3,060,962 JBrowse link
G Rnase6 ribonuclease A family member k6 ISO (PMID:25075772)
(MGI:5902674|PMID:25075772)
UniProtKB
UniProt
PMID:25075772 MGI:5902674 NCBI chrNW_004936880:78,532...79,342 JBrowse link
G Rpl39 ribosomal protein L39 ISO (PMID:12860195) UniProtKB PMID:12860195 NCBI chrNW_004936479:10,132,965...10,136,506 JBrowse link
G Slpi secretory leukocyte peptidase inhibitor ISO (PMID:18714013)
(MGI:3777210|PMID:18322212)
UniProtKB
UniProt
PMID:18322212 PMID:18714013 MGI:3777210 NCBI chrNW_004936514:7,618,382...7,620,790 JBrowse link
G Tac1 tachykinin precursor 1 ISO (PMID:18603306) UniProt PMID:18603306 NCBI chrNW_004936585:2,932,783...2,941,141 JBrowse link
G Vip vasoactive intestinal peptide ISO (PMID:18603306) UniProt PMID:18603306 NCBI chrNW_004936489:5,425,778...5,434,483 JBrowse link
antibacterial peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mmp7 matrix metallopeptidase 7 ISO (MGI:4838964|PMID:20056603) MGI PMID:20056603 MGI:4838964 NCBI chrNW_004936551:5,388,456...5,395,071 JBrowse link
antibacterial peptide secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mmp7 matrix metallopeptidase 7 ISO (MGI:3698376|PMID:11248802) MGI PMID:11248802 MGI:3698376 NCBI chrNW_004936551:5,388,456...5,395,071 JBrowse link
cellular response to bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd36 CD36 molecule ISO (MGI:3528769|PMID:15690042) MGI PMID:15690042 MGI:3528769 NCBI chrNW_004936810:791,823...838,303 JBrowse link
G Tirap TIR domain containing adaptor protein ISO (MGI:3528769|PMID:15690042) MGI PMID:15690042 MGI:3528769 NCBI chrNW_004936572:5,926,193...5,938,621 JBrowse link
G Tlr2 toll like receptor 2 ISO (MGI:3528769|PMID:15690042) MGI PMID:15690042 MGI:3528769 NCBI chrNW_004936576:522,234...531,660 JBrowse link
cellular response to diacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd14 CD14 molecule ISO (PMID:16880211) UniProtKB PMID:16880211 NCBI chrNW_004936531:9,572,392...9,575,771 JBrowse link
G Cd36 CD36 molecule ISO (PMID:16880211) UniProtKB PMID:16880211 NCBI chrNW_004936810:791,823...838,303 JBrowse link
G Tlr2 toll like receptor 2 ISO (PMID:16880211), (PMID:19931471) UniProtKB PMID:16880211 PMID:19931471 NCBI chrNW_004936576:522,234...531,660 JBrowse link
G Tlr6 toll like receptor 6 ISO (PMID:16880211), (PMID:19931471) UniProtKB PMID:16880211 PMID:19931471 NCBI chrNW_004936482:6,607,723...6,610,161 JBrowse link
cellular response to lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 ISO (MGI:4411947|PMID:19752193) UniProt PMID:19752193 MGI:4411947 NCBI chrNW_004936559:7,177,887...7,312,660 JBrowse link
G Abcb1 ATP binding cassette subfamily B member 1 ISO RGD PMID:20300455 RGD:39456124 NCBI chrNW_004936763:1,225,355...1,308,257 JBrowse link
G Abcc2 ATP binding cassette subfamily C member 2 ISO RGD PMID:20702406 RGD:11081005 NCBI chrNW_004936636:292,631...341,999 JBrowse link
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase ISO (MGI:82358|PMID:8806812) MGI PMID:8806812 MGI:82358 NCBI chrNW_004936487:17,690,206...17,819,619 JBrowse link
G Acod1 aconitate decarboxylase 1 ISO (PMID:23609450), (PMID:23610393)
(MGI:5490395|PMID:23610393), (MGI:5490396|PMID:23609450)
UniProtKB
UniProt
PMID:23609450 PMID:23610393 MGI:5490395 MGI:5490396 NCBI chrNW_004936511:4,322,198...4,326,562 JBrowse link
G Adam9 ADAM metallopeptidase domain 9 ISO (PMID:22480688) BHF-UCL PMID:22480688 NCBI chrNW_004936710:2,301,470...2,388,533 JBrowse link
G Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif 13 ISO RGD PMID:22871409 RGD:7207038 NCBI chrNW_004936669:3,449,259...3,478,471 JBrowse link
G Aicda activation induced cytidine deaminase ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chrNW_004936870:25,039...34,601 JBrowse link
G Akap8 A-kinase anchoring protein 8 ISO (MGI:5763364|PMID:19531803) UniProt PMID:19531803 MGI:5763364 NCBI chrNW_004936596:5,123,988...5,142,326 JBrowse link
G Ankrd1 ankyrin repeat domain 1 ISO (PMID:7730328)
(MGI:5294542|PMID:17239933)
BHF-UCL
UniProt
PMID:7730328 PMID:17239933 MGI:5294542 NCBI chrNW_004936601:3,502,844...3,510,919 JBrowse link
G Arg2 arginase 2 ISO RGD PMID:11250887 RGD:4144048 NCBI chrNW_004936495:11,004,296...11,045,467 JBrowse link
G Arid5a AT-rich interaction domain 5A ISO (MGI:5887181|PMID:27671645) UniProt PMID:27671645 MGI:5887181 NCBI chrNW_004936744:539,150...545,021 JBrowse link
G Ass1 argininosuccinate synthase 1 ISO alveolar macrophages RGD PMID:9879717 RGD:4139906 NCBI chrNW_004936487:17,482,307...17,527,407 JBrowse link
G Axl AXL receptor tyrosine kinase ISO (PMID:19657094) UniProtKB PMID:19657094 NCBI chrNW_004936661:3,658,140...3,687,290 JBrowse link
G B2m beta-2-microglobulin ISO (PMID:23144825) UniProt PMID:23144825 NCBI chrNW_004936471:7,646,504...7,655,656 JBrowse link
G Bcl10 BCL10 immune signaling adaptor ISO (PMID:16831874) UniProt PMID:16831874 NCBI chrNW_004936608:434,740...442,162 JBrowse link
G Bcr BCR activator of RhoGEF and GTPase ISO (MGI:71493|PMID:7889565) MGI PMID:7889565 MGI:71493 NCBI chrNW_004936619:288,377...432,297 JBrowse link
G Bpi bactericidal permeability increasing protein ISO (PMID:1937776) UniProt PMID:1937776 NCBI chrNW_004936561:3,043,520...3,069,680 JBrowse link
G Bysl bystin like ISO RGD PMID:15305856 RGD:2316201 NCBI chrNW_004936476:17,887,998...17,896,598 JBrowse link
G Cactin cactin, spliceosome C complex subunit ISO (PMID:20829348) UniProtKB PMID:20829348 NCBI chrNW_004936588:2,051,636...2,061,651 JBrowse link
G Capn2 calpain 2 ISO RGD PMID:23390485 RGD:13792657 NCBI chrNW_004936526:879,765...932,682 JBrowse link
G Ccl20 C-C motif chemokine ligand 20 ISO RGD PMID:15618187 RGD:7483631 NCBI chrNW_004936525:8,238,128...8,240,974 JBrowse link
G Ccl5 C-C motif chemokine ligand 5 ISO RGD PMID:20578038 RGD:4889899 NCBI chrNW_004936490:253,279...259,947 JBrowse link
G Cd14 CD14 molecule ISO (PMID:8612135)
(MGI:5645195|PMID:24380872), (MGI:80217|PMID:8612135)
(PMID:12594207)
UniProtKB
UniProt
MGI
RGD
PMID:8612135 PMID:12594207 PMID:22511970 PMID:24380872 MGI:5645195 MGI:80217 RGD:7183752 NCBI chrNW_004936531:9,572,392...9,575,771 JBrowse link
G Cd180 CD180 molecule ISO (MGI:1860539|PMID:10880523) MGI PMID:10880523 MGI:1860539 NCBI chrNW_004936480:2,105,179...2,119,137 JBrowse link
G Cd36 CD36 molecule ISO (MGI:3587138|PMID:16061696) MGI PMID:16061696 MGI:3587138 NCBI chrNW_004936810:791,823...838,303 JBrowse link
G Cd40 CD40 molecule ISO RGD PMID:19271152 RGD:5491178 NCBI chrNW_004936514:6,936,915...6,947,246 JBrowse link
G Cd68 CD68 molecule ISO (MGI:6274946|PMID:16157452) ARUK-UCL PMID:16157452 MGI:6274946 NCBI chrNW_004936595:858,289...861,131 JBrowse link
G Cd80 CD80 molecule ISO (MGI:3828894|PMID:19047410) MGI PMID:19047410 MGI:3828894 NCBI chrNW_004936536:6,462,080...6,483,450 JBrowse link
G Cd86 CD86 molecule ISO (MGI:3828894|PMID:19047410) RGD
MGI
PMID:19047410 PMID:21039614 MGI:3828894 RGD:4892198 NCBI chrNW_004936536:8,414,491...8,481,712 JBrowse link
G Cdc73 cell division cycle 73 ISO (MGI:5319608|PMID:17911113) UniProt PMID:17911113 MGI:5319608 NCBI chrNW_004936638:1,365,457...1,482,497 JBrowse link
G Cdk19 cyclin dependent kinase 19 ISO RGD PMID:20066559 RGD:9590278 NCBI chrNW_004936564:6,443,041...6,584,767 JBrowse link
G Cdk4 cyclin dependent kinase 4 ISO (MGI:78049|PMID:8543804) MGI PMID:8543804 MGI:78049 NCBI chrNW_004936646:1,886,262...1,889,260 JBrowse link
G Cebpe CCAAT enhancer binding protein epsilon ISO RGD PMID:9593684 RGD:728287 NCBI chrNW_004936722:1,207,718...1,209,482 JBrowse link
G Chmp5 charged multivesicular body protein 5 ISO (PMID:27812135) UniProtKB PMID:27812135 NCBI chrNW_004936524:1,804,643...1,820,491 JBrowse link
G Cmpk2 cytidine/uridine monophosphate kinase 2 ISO (MGI:73245|PMID:7751651) MGI PMID:7751651 MGI:73245 NCBI chrNW_004936532:3,896,654...3,908,184 JBrowse link
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 ISO RGD PMID:21620800 RGD:9685153 NCBI chrNW_004936483:17,216,288...17,296,430 JBrowse link
G Csf2 colony stimulating factor 2 ISO RGD PMID:18387647 RGD:5131517 NCBI chrNW_004936647:3,081,896...3,083,864 JBrowse link
G Csf3 colony stimulating factor 3 ISO RGD PMID:19732808 RGD:5133735 NCBI chrNW_004936490:15,142,526...15,146,375 JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component ISO (MGI:5319608|PMID:17911113) UniProt PMID:17911113 MGI:5319608 NCBI chrNW_004936528:7,585,937...7,613,022 JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 ISO (MGI:6162390|PMID:23499256) RGD
ARUK-UCL
PMID:10422773 PMID:23499256 MGI:6162390 RGD:4892028 NCBI chrNW_004936473:28,508,726...28,535,640 JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 ISO (PMID:23776175) MGI PMID:23776175 NCBI chrNW_004936676:60,869...63,028 JBrowse link
G Cxcl16 C-X-C motif chemokine ligand 16 ISO (MGI:1891794|PMID:11017100) UniProt PMID:11017100 MGI:1891794 NCBI chrNW_004936677:3,157,173...3,162,599 JBrowse link
G Cxcl8 C-X-C motif chemokine ligand 8 ISO (PMID:19912257) BHF-UCL PMID:19912257 NCBI chrNW_004936598:1,779,471...1,781,353 JBrowse link
G Dab2ip DAB2 interacting protein ISO (PMID:19948740)
(MGI:4453088|PMID:19948740)
UniProtKB
UniProt
PMID:19948740 MGI:4453088 NCBI chrNW_004936487:10,056,809...10,243,021 JBrowse link
G Ednrb endothelin receptor type B ISO RGD PMID:18091567 RGD:4892289 NCBI chrNW_004936511:3,446,864...3,478,434 JBrowse link
G Entpd2 ectonucleoside triphosphate diphosphohydrolase 2 ISO RGD PMID:23990338 RGD:9685490 NCBI chrNW_004936669:901,192...906,765 JBrowse link
G Epas1 endothelial PAS domain protein 1 ISO RGD PMID:12099714 RGD:11041576 NCBI chrNW_004936508:5,855,748...5,938,879 JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb ISO RGD PMID:19106808 RGD:5147925 NCBI chrNW_004937131:80,014...96,114 JBrowse link
G Fcgr3a Fc fragment of IgG receptor IIIa ISO RGD PMID:19106808 RGD:5147925 NCBI chrNW_004937131:42,523...49,533 JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 ISO RGD PMID:30250515 RGD:25330356 NCBI chrNW_004936710:1,760,365...1,815,269 JBrowse link
G Fn1 fibronectin 1 ISO RGD PMID:11819312 RGD:7205475 NCBI chrNW_004936586:1,708,803...1,773,372 JBrowse link
G Fubp1 far upstream element binding protein 1 ISO RGD PMID:23797733 RGD:13673879 NCBI chrNW_004936571:4,729,135...4,760,943 JBrowse link
G Gata1 GATA binding protein 1 ISO RGD PMID:17687519 RGD:5131526 NCBI chrNW_004936721:742,862...750,843 JBrowse link
G Gfer growth factor, augmenter of liver regeneration ISO RGD PMID:23073658 RGD:9685733 NCBI chrNW_004936694:2,051,362...2,053,812 JBrowse link
G Gfi1 growth factor independent 1 transcriptional repressor ISO (PMID:20547752) UniProtKB PMID:20547752 NCBI chrNW_004936537:6,610,565...6,618,509 JBrowse link
G Ghsr growth hormone secretagogue receptor ISO RGD PMID:15155262 RGD:12905047 NCBI chrNW_004936593:268,736...273,623 JBrowse link
G Grk6 G protein-coupled receptor kinase 6 ISO RGD PMID:23359120 RGD:13792782 NCBI chrNW_004936597:1,706,671...1,722,370 JBrowse link
G Gstp1 glutathione S-transferase pi 1 ISO (MGI:5009411|PMID:16023107) BHF-UCL PMID:16023107 MGI:5009411 NCBI chrNW_004936599:2,197,681...2,200,642 JBrowse link
G Hamp hepcidin antimicrobial peptide ISO RGD PMID:23506423 RGD:11041627 NCBI chrNW_004936570:1,009,344...1,010,654 JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 ISO (MGI:5705210|PMID:25337993) UniProt PMID:25337993 MGI:5705210 NCBI chrNW_004936515:6,001,324...6,015,407 JBrowse link
G Hdac5 histone deacetylase 5 ISO RGD PMID:22933299 RGD:9590257 NCBI chrNW_004936541:561,721...598,915 JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO RGD PMID:19940979 RGD:5147884 NCBI chrNW_004936495:5,770,988...5,816,157 JBrowse link
G Hmgb1 high mobility group box 1 ISO (MGI:6244743|PMID:28096568) ARUK-UCL PMID:28096568 MGI:6244743 NCBI chrNW_004936472:25,236,728...25,246,585 JBrowse link
G Hmgb2 high mobility group box 2 ISO (PMID:19811285) UniProtKB PMID:19811285 NCBI chrNW_004936516:4,536,664...4,539,331 JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 ISO RGD PMID:11578593 RGD:1599044 NCBI chrNW_004936627:4,451,847...4,473,163 JBrowse link
G Hnrnpm heterogeneous nuclear ribonucleoprotein M ISO RGD PMID:14597422 RGD:10054261 NCBI chrNW_004936588:5,241,276...5,283,952 JBrowse link
G Hsf1 heat shock transcription factor 1 ISO RGD PMID:21540803 RGD:10402943 NCBI chrNW_004936470:7,927,734...7,950,805 JBrowse link
G Icam1 intercellular adhesion molecule 1 ISO RGD PMID:20674665 RGD:4145373 NCBI chrNW_004936659:616,570...627,172 JBrowse link
G Ifng interferon gamma ISO (MGI:3821815|PMID:18791161) MGI PMID:18791161 MGI:3821815 NCBI chrNW_004936545:6,139,130...6,144,543 JBrowse link
G Il10 interleukin 10 ISO (MGI:3828894|PMID:19047410), (MGI:5013871|PMID:21609717), (MGI:6201792|PMID:23071313) ARUK-UCL PMID:19047410 PMID:21609717 PMID:23071313 MGI:3828894 MGI:5013871 MGI:6201792 NCBI chrNW_004936557:5,834,874...5,838,502 JBrowse link
G Il12a interleukin 12A ISO (MGI:3828894|PMID:19047410) MGI PMID:19047410 MGI:3828894 NCBI chrNW_004936519:6,166,060...6,180,652 JBrowse link
G Il12b interleukin 12B ISO (MGI:4412460|PMID:18025219), (MGI:5013875|PMID:21606371) MGI PMID:18025219 PMID:21606371 MGI:4412460 MGI:5013875 NCBI chrNW_004936515:4,056,214...4,066,121 JBrowse link
G Il18 interleukin 18 ISO RGD PMID:11739527 RGD:729357 NCBI chrNW_004936612:2,306,963...2,325,086 JBrowse link
G Il1b interleukin 1 beta ISO RGD PMID:23200736 RGD:7175528 NCBI chrNW_004936783:1,251,678...1,256,807 JBrowse link
G Il24 interleukin 24 ISO RGD PMID:12182458 RGD:5147432 NCBI chrNW_004936557:5,719,592...5,727,113 JBrowse link
G Irak1 interleukin 1 receptor associated kinase 1 ISO RGD PMID:15793310 RGD:1579809 NCBI chrNW_004936809:891,407...900,311 JBrowse link
G Irf3 interferon regulatory factor 3 ISO (MGI:5013875|PMID:21606371) MGI PMID:21606371 MGI:5013875 NCBI chrNW_004936664:3,477,750...3,482,489 JBrowse link
G Irf8 interferon regulatory factor 8 ISO (MGI:3653161|PMID:9348310) MGI PMID:9348310 MGI:3653161 NCBI chrNW_004936641:2,608,109...2,622,446 JBrowse link
G Irgm immunity related GTPase M ISO (PMID:25891078) UniProtKB PMID:25891078 NCBI chrNW_004936504:4,055,091...4,056,089 JBrowse link
G Jak2 Janus kinase 2 ISO (MGI:5013875|PMID:21606371) MGI PMID:21606371 MGI:5013875 NCBI chrNW_004936503:111,722...243,627 JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit ISO (PMID:25110868) AgBase PMID:25110868 NCBI chrNW_004936522:3,034,364...3,037,632 JBrowse link
G Kmo kynurenine 3-monooxygenase ISO RGD PMID:26524415 RGD:13703043 NCBI chrNW_004936526:8,877,085...8,928,280 JBrowse link
G Lbp lipopolysaccharide binding protein ISO (PMID:24120359)
(MGI:5645195|PMID:24380872)
(PMID:12594207)
UniProtKB
UniProt
MGI
PMID:12594207 PMID:24120359 PMID:24380872 MGI:5645195 NCBI chrNW_004936561:3,017,471...3,035,481 JBrowse link
G Lcn2 lipocalin 2 ISO RGD PMID:19329498 RGD:2316495 NCBI chrNW_004936487:15,721,752...15,725,396 JBrowse link
G Ldoc1 LDOC1 regulator of NFKB signaling ISO (PMID:27812135) UniProtKB PMID:27812135 NCBI chrNW_004936513:6,481,758...6,486,018 JBrowse link
G Litaf lipopolysaccharide induced TNF factor ISO (MGI:3687609|PMID:16954198) MGI PMID:16954198 MGI:3687609 NCBI chrNW_004936530:9,409,378...9,421,974 JBrowse link
G LOC101970767 steroid 17-alpha-hydroxylase/17,20 lyase ISO RGD PMID:20665543 RGD:4145535 NCBI chrNW_004936600:3,097,620...3,102,713 JBrowse link
G LOC101975820 cholesterol side-chain cleavage enzyme, mitochondrial ISO RGD PMID:20665543 RGD:4145535 NCBI chrNW_004936471:33,367,810...33,380,764 JBrowse link
G Ltc4s leukotriene C4 synthase ISO RGD PMID:9794912 RGD:2316634 NCBI chrNW_004936739:975,494...978,426 JBrowse link
G Ly96 lymphocyte antigen 96 ISO (MGI:5645195|PMID:24380872) UniProt PMID:24380872 MGI:5645195 NCBI chrNW_004936648:2,653,252...2,671,453 JBrowse link
G Malt1 MALT1 paracaspase ISO (PMID:16831874) UniProt PMID:16831874 NCBI chrNW_004936497:5,854,361...5,910,719 JBrowse link
G Map2k3 mitogen-activated protein kinase kinase 3 ISO RGD PMID:14670949 RGD:7495812 NCBI chrNW_004936741:362,682...386,633 JBrowse link
G Map2k7 mitogen-activated protein kinase kinase 7 ISO (MGI:1101248|PMID:9405446) UniProt PMID:9405446 MGI:1101248 NCBI chrNW_004936588:4,882,191...4,891,807 JBrowse link
G Mapk14 mitogen-activated protein kinase 14 ISO (PMID:23776175) MGI PMID:23776175 NCBI chrNW_004936476:23,237,762...23,310,211 JBrowse link
G Mapk8 mitogen-activated protein kinase 8 ISO (PMID:23776175) MGI PMID:23776175 NCBI chrNW_004936728:1,775,746...1,893,895 JBrowse link
G Mapk9 mitogen-activated protein kinase 9 ISO RGD PMID:9475517 RGD:2304245 NCBI chrNW_004936739:551,678...602,027 JBrowse link
G Mef2c myocyte enhancer factor 2C ISO (MGI:3829850|PMID:18955699) UniProt PMID:18955699 MGI:3829850 NCBI chrNW_004936469:7,060,480...7,225,497 JBrowse link
G Mmp1 matrix metallopeptidase 1 ISO RGD PMID:21683124 RGD:7207286 NCBI chrNW_004936551:5,167,909...5,175,149 JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO RGD PMID:21683124 RGD:7207286 NCBI chrNW_004936514:7,038,240...7,045,873 JBrowse link
G Mrc1 mannose receptor C-type 1 ISO (MGI:5486412|PMID:22832163) MGI PMID:22832163 MGI:5486412 NCBI chrNW_004936520:9,463,007...9,547,321 JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor ISO (MGI:6355543|PMID:17660297) ARUK-UCL PMID:17660297 MGI:6355543 NCBI chrNW_004936473:27,672,237...27,676,339 JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 ISO (PMID:23776175) RGD
MGI
PMID:16842873 PMID:23776175 RGD:10045666 NCBI chrNW_004936520:733,760...850,563 JBrowse link
G Nfkbib NFKB inhibitor beta ISO (MGI:4437182|PMID:20060382) MGI PMID:20060382 MGI:4437182 NCBI chrNW_004936661:1,850,185...1,857,757 JBrowse link
G Nfkbil1 NFKB inhibitor like 1 ISO (PMID:20829348) UniProtKB PMID:20829348 NCBI chrNW_004936727:1,950,356...1,963,847 JBrowse link
G Nlrp3 NLR family pyrin domain containing 3 ISO (PMID:28847925)
(MGI:6095076|PMID:28847925)
(PMID:12483741)
UniProt
BHF-UCL
PMID:12483741 PMID:28847925 MGI:6095076 NCBI chrNW_004936864:709,693...732,119 JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 ISO (PMID:27812135) UniProtKB PMID:27812135 NCBI chrNW_004936475:3,708,069...3,742,845 JBrowse link
G Nos2 nitric oxide synthase 2 ISO (MGI:3821815|PMID:18791161), (MGI:4412460|PMID:18025219) RGD
MGI
PMID:18025219 PMID:18791161 PMID:21975807 MGI:3821815 MGI:4412460 RGD:5508737 NCBI chrNW_004936538:4,052,277...4,097,051 JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 ISO (PMID:18511497) BHF-UCL PMID:18511497 NCBI chrNW_004936490:15,206,194...15,213,858 JBrowse link
G Nr1h3 nuclear receptor subfamily 1 group H member 3 ISO (PMID:18511497)
(MGI:5009771|PMID:21187453)
BHF-UCL PMID:18511497 PMID:21187453 MGI:5009771 NCBI chrNW_004936562:1,937,665...1,946,680 JBrowse link
G Nr1h4 nuclear receptor subfamily 1 group H member 4 ISO (MGI:5707586|PMID:18972444) UniProt PMID:18972444 MGI:5707586 NCBI chrNW_004936492:13,315,265...13,365,186 JBrowse link
G Nuggc nuclear GTPase, germinal center associated ISO (PMID:19734146) UniProtKB PMID:19734146 NCBI chrNW_004936675:885,015...931,657 JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase ISO RGD PMID:19098112 RGD:9590190 NCBI chrNW_004936762:99,335...137,833 JBrowse link
G Oprk1 opioid receptor kappa 1 ISO RGD PMID:9645969 RGD:9831421 NCBI chrNW_004936496:280,593...305,900 JBrowse link
G P2ry2 purinergic receptor P2Y2 ISO RGD PMID:18689605 RGD:2316659 NCBI chrNW_004936498:2,432,436...2,444,495 JBrowse link
G Pabpn1 poly(A) binding protein nuclear 1 ISO (MGI:5795816|PMID:22844456) UniProt PMID:22844456 MGI:5795816 NCBI chrNW_004936722:1,039,970...1,044,942 JBrowse link
G Paf1 PAF1 homolog, Paf1/RNA polymerase II complex component ISO (MGI:5319608|PMID:17911113) UniProt PMID:17911113 MGI:5319608 NCBI chrNW_004936661:2,236,121...2,241,086 JBrowse link
G Park7 Parkinsonism associated deglycase ISO RGD PMID:23847046 RGD:13462068 NCBI chrNW_004936623:2,422,780...2,436,817 JBrowse link
G Pdcd4 programmed cell death 4 ISO (MGI:4438829|PMID:19946272) BHF-UCL PMID:19946272 MGI:4438829 NCBI chrNW_004936486:1,684,167...1,705,387 JBrowse link
G Pde2a phosphodiesterase 2A ISO (PMID:21571906) UniProtKB PMID:21571906 NCBI chrNW_004936498:1,856,256...1,944,405 JBrowse link
G Pde4b phosphodiesterase 4B ISO (MGI:3521611|PMID:15585880) MGI PMID:15585880 MGI:3521611 NCBI chrNW_004936591:5,152,491...5,666,728 JBrowse link
G Pde4d phosphodiesterase 4D ISO (MGI:3521611|PMID:15585880) MGI PMID:15585880 MGI:3521611 NCBI chrNW_004936480:8,123,437...9,235,586 JBrowse link
G Plaa phospholipase A2 activating protein ISO (PMID:28007986) UniProtKB PMID:28007986 NCBI chrNW_004936611:2,665,294...2,698,372 JBrowse link
G Plau plasminogen activator, urokinase ISO RGD PMID:19184369 RGD:7241806 NCBI chrNW_004936521:5,238,128...5,243,829 JBrowse link
G Plscr1 phospholipid scramblase 1 ISO (PMID:17590392) UniProtKB PMID:17590392 NCBI chrNW_004936519:8,759,702...8,790,823 JBrowse link
G Plscr3 phospholipid scramblase 3 ISO (PMID:17590392) UniProtKB PMID:17590392 NCBI chrNW_004936595:674,754...679,979 JBrowse link
G Plscr4 phospholipid scramblase 4 ISO (PMID:17590392) UniProtKB PMID:17590392 NCBI chrNW_004936519:8,977,763...9,022,761 JBrowse link
G Ppard peroxisome proliferator activated receptor delta ISO RGD PMID:15728586 RGD:1580656 NCBI chrNW_004936476:23,799,285...23,886,606 JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO RGD PMID:19853624 RGD:10059687 NCBI chrNW_004936477:4,881,230...5,488,208 JBrowse link
G Prpf8 pre-mRNA processing factor 8 ISO RGD PMID:1345341 RGD:10045884 NCBI chrNW_004936538:7,780,022...7,814,575 JBrowse link
G Ptger3 prostaglandin E receptor 3 ISO RGD PMID:14636300 RGD:10043359 NCBI chrNW_004936591:1,174,364...1,250,233 JBrowse link
G Pycard PYD and CARD domain containing ISO (PMID:12486103) UniProtKB PMID:12486103 NCBI chrNW_004936501:13,550,702...13,552,774 JBrowse link
G Rara retinoic acid receptor alpha ISO (MGI:4411947|PMID:19752193) UniProt PMID:19752193 MGI:4411947 NCBI chrNW_004936490:15,376,217...15,420,638 JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit ISO (PMID:25762865)
(PMID:20547752)
RGD
ARUK-UCL
UniProtKB
PMID:9918814 PMID:15728586 PMID:20547752 PMID:25762865 RGD:1580656 RGD:2298880 NCBI chrNW_004936599:3,800,142...3,810,583 JBrowse link
G Rhoa ras homolog family member A ISO (PMID:19734146) UniProtKB PMID:19734146 NCBI chrNW_004936529:1,000,050...1,045,655 JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 ISO (MGI:2176424|PMID:11894097)
(MGI:2176422|PMID:11894098)
MGI PMID:11894097 PMID:11894098 MGI:2176422 MGI:2176424 NCBI chrNW_004936544:3,606,925...3,653,248 JBrowse link
G Sbno2 strawberry notch homolog 2 ISO (MGI:5660440|PMID:25903009) UniProt PMID:25903009 MGI:5660440 NCBI chrNW_004936588:509,244...556,424 JBrowse link
G Selenos selenoprotein S ISO (PMID:18675776) BHF-UCL PMID:18675776 NCBI chrNW_004936483:2,589,773...2,600,837 JBrowse link
G Serpine1 serpin family E member 1 ISO (PMID:19916862) RGD
BHF-UCL
PMID:19916862 PMID:20060032 RGD:13208812 NCBI chrNW_004936543:1,032,543...1,040,956 JBrowse link
G Sgms1 sphingomyelin synthase 1 ISO RGD PMID:12353928 RGD:1302423 NCBI chrNW_004936735:1,702,754...1,984,141 JBrowse link
G Shpk sedoheptulokinase ISO (PMID:22682222)
(MGI:5428058|PMID:22682222)
UniProtKB
UniProt
PMID:22682222 MGI:5428058 NCBI chrNW_004936677:314,328...342,892 JBrowse link
G Sirpa signal regulatory protein alpha ISO (MGI:3760575|PMID:17954568) ARUK-UCL PMID:17954568 MGI:3760575 NCBI chrNW_004936485:16,608,317...16,654,552 JBrowse link
G Spon2 spondin 2 ISO (MGI:2686801|PMID:14691481) MGI PMID:14691481 MGI:2686801 NCBI chrNW_004936477:22,087,450...22,093,677 JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase ISO RGD PMID:20149623 RGD:2325014 NCBI chrNW_004936561:3,826,802...3,844,406 JBrowse link
G Stap1 signal transducing adaptor family member 1 ISO (MGI:3831067|PMID:19100238) BHF-UCL PMID:19100238 MGI:3831067 NCBI chrNW_004936582:877,241...908,697 JBrowse link
G Star steroidogenic acute regulatory protein ISO RGD PMID:20665543 RGD:4145535 NCBI chrNW_004936710:1,523,289...1,530,181 JBrowse link
G Stat1 signal transducer and activator of transcription 1 ISO (MGI:5013875|PMID:21606371) MGI PMID:21606371 MGI:5013875 NCBI chrNW_004936506:7,196,860...7,235,854 JBrowse link
G Tbxa2r thromboxane A2 receptor ISO RGD PMID:10513923 RGD:11059603 NCBI chrNW_004936588:2,040,712...2,044,635 JBrowse link
G Tfpi tissue factor pathway inhibitor ISO RGD PMID:11816723 RGD:727341 NCBI chrNW_004936506:10,103,120...10,172,800 JBrowse link
G Ticam1 toll like receptor adaptor molecule 1 ISO (MGI:3718934|PMID:17658277) ParkinsonsUK-UCL PMID:17658277 MGI:3718934 NCBI chrNW_004936588:2,818,909...2,827,797 JBrowse link
G Ticam2 toll like receptor adaptor molecule 2 ISO (PMID:22685567)
(PMID:19412184)
UniProtKB PMID:19412184 PMID:22685567 NCBI chrNW_004936742:743,191...745,332 JBrowse link
G Tlr4 toll like receptor 4 ISO (PMID:11432859)
(MGI:2686801|PMID:14691481)
(MGI:1860539|PMID:10880523), (MGI:5604854|PMID:24740015), (MGI:6244743|PMID:28096568)
(MGI:1860539|PMID:10880523), (MGI:4421230|PMID:20051628)
(PMID:30321456)
UniProtKB
MGI
BHF-UCL
ARUK-UCL
RGD
PMID:10880523 PMID:11432859 PMID:14691481 PMID:20051628 PMID:20438866 PMID:24740015 PMID:28096568 PMID:30321456 MGI:1860539 MGI:2686801 MGI:4421230 MGI:5604854 MGI:6244743 RGD:7777075 NCBI chrNW_004936487:6,519,140...6,532,018 JBrowse link
G Tlr5 toll like receptor 5 ISO RGD PMID:21308757 RGD:5129495 NCBI chrNW_004936526:383,490...387,007 JBrowse link
G Tnf tumor necrosis factor ISO (MGI:3828894|PMID:19047410), (MGI:4437182|PMID:20060382), (MGI:5013875|PMID:21606371), (MGI:5543352|PMID:23610142) RGD
MGI
PMID:10959811 PMID:15602748 PMID:17964727 PMID:19047410 PMID:20060382 PMID:21606371 PMID:23610142 MGI:3828894 MGI:4437182 MGI:5013875 MGI:5543352 RGD:14994703 RGD:14995441 RGD:1582142 NCBI chrNW_004936727:1,936,066...1,937,766 JBrowse link
G Tnfaip3 TNF alpha induced protein 3 ISO (PMID:19912257), (PMID:21127049), (PMID:21220427) BHF-UCL PMID:19912257 PMID:21127049 PMID:21220427 NCBI chrNW_004936560:5,124,955...5,138,988 JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B ISO (PMID:22480688) BHF-UCL PMID:22480688 NCBI chrNW_004936474:908,414...935,765 JBrowse link
G Tnfsf4 TNF superfamily member 4 ISO (PMID:20844189) BHF-UCL PMID:20844189 NCBI chrNW_004936481:14,391,359...14,409,514 JBrowse link
G Tnip2 TNFAIP3 interacting protein 2 ISO (MGI:3656197|PMID:16633345) UniProt PMID:16633345 MGI:3656197 NCBI chrNW_004936477:20,810,188...20,841,537 JBrowse link
G Traf6 TNF receptor associated factor 6 ISO (PMID:23776175) MGI PMID:23776175 NCBI chrNW_004936533:1,857,685...1,874,973 JBrowse link
G Trim41 tripartite motif containing 41 ISO (PMID:27812135) UniProtKB PMID:27812135 NCBI chrNW_004936826:734,306...747,047 JBrowse link
G Tspo translocator protein ISO RGD PMID:14678758 RGD:2317158 NCBI chrNW_004936718:992,301...995,172 JBrowse link
G Upf1 UPF1 RNA helicase and ATPase ISO (PMID:26255671) UniProtKB PMID:26255671 NCBI chrNW_004936596:2,469,444...2,505,688 JBrowse link
G Vim vimentin ISO (PMID:27812135) UniProtKB PMID:27812135 NCBI chrNW_004936520:10,051,692...10,059,324 JBrowse link
G Vldlr very low density lipoprotein receptor ISO RGD PMID:16376325 RGD:1625574 NCBI chrNW_004936503:2,407,040...2,440,366 JBrowse link
G Vwf von Willebrand factor ISO RGD PMID:17708840 RGD:11079229 NCBI chrNW_004936709:1,578,137...1,741,877 JBrowse link
G Wnt5a Wnt family member 5A ISO (PMID:18174455) UniProtKB PMID:18174455 NCBI chrNW_004936473:6,031,627...6,052,211 JBrowse link
G Xbp1 X-box binding protein 1 ISO (PMID:11460154)
(MGI:5605956|PMID:12612580)
UniProtKB
UniProt
PMID:11460154 PMID:12612580 MGI:5605956 NCBI chrNW_004936657:2,891,171...2,895,409 JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A ISO (PMID:25861989)
(MGI:3842851|PMID:19322177), (MGI:5142149|PMID:21616078), (MGI:5706859|PMID:26000482), (MGI:5751631|PMID:26255671)
(PMID:18178554), (PMID:19909337), (PMID:22055188)
UniProtKB
UniProt
BHF-UCL
PMID:18178554 PMID:19322177 PMID:19909337 PMID:21616078 PMID:22055188 PMID:25861989 PMID:26000482 PMID:26255671 MGI:3842851 MGI:5142149 MGI:5706859 MGI:5751631 NCBI chrNW_004936474:19,714,145...19,722,512 JBrowse link
G Zfp36 ZFP36 ring finger protein ISO (PMID:14766228)
(MGI:5795816|PMID:22844456)
(MGI:4457258|PMID:10330172), (MGI:5784995|PMID:11533235), (MGI:5784999|PMID:9703499)
(PMID:14679154), (PMID:15187101)
UniProtKB
UniProt
PMID:9703499 PMID:10330172 PMID:11533235 PMID:14679154 PMID:14766228 PMID:15187101 PMID:22844456 MGI:4457258 MGI:5784995 MGI:5784999 MGI:5795816 NCBI chrNW_004936661:2,251,148...2,253,527 JBrowse link
cellular response to lipoteichoic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl20 C-C motif chemokine ligand 20 ISO RGD PMID:15618187 RGD:7483631 NCBI chrNW_004936525:8,238,128...8,240,974 JBrowse link
G Cd14 CD14 molecule ISO (PMID:12594207) MGI PMID:12594207 NCBI chrNW_004936531:9,572,392...9,575,771 JBrowse link
G Cd36 CD36 molecule ISO (MGI:3528769|PMID:15690042)
(MGI:3587138|PMID:16061696)
MGI PMID:15690042 PMID:16061696 MGI:3528769 MGI:3587138 NCBI chrNW_004936810:791,823...838,303 JBrowse link
G Lbp lipopolysaccharide binding protein ISO (PMID:12594207) MGI PMID:12594207 NCBI chrNW_004936561:3,017,471...3,035,481 JBrowse link
G Mapk14 mitogen-activated protein kinase 14 ISO (PMID:26649771) UniProtKB PMID:26649771 NCBI chrNW_004936476:23,237,762...23,310,211 JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit ISO (PMID:26649771) UniProtKB PMID:26649771 NCBI chrNW_004936599:3,800,142...3,810,583 JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 ISO (MGI:2176422|PMID:11894098) MGI PMID:11894098 MGI:2176422 NCBI chrNW_004936544:3,606,925...3,653,248 JBrowse link
G Tirap TIR domain containing adaptor protein ISO (MGI:3528769|PMID:15690042) MGI PMID:15690042 MGI:3528769 NCBI chrNW_004936572:5,926,193...5,938,621 JBrowse link
G Tlr2 toll like receptor 2 ISO (PMID:26649771)
(MGI:3528769|PMID:15690042)
(PMID:12594207)
UniProtKB
MGI
PMID:12594207 PMID:15690042 PMID:26649771 MGI:3528769 NCBI chrNW_004936576:522,234...531,660 JBrowse link
G Tlr4 toll like receptor 4 ISO (MGI:2178646|PMID:10549626) MGI PMID:10549626 MGI:2178646 NCBI chrNW_004936487:6,519,140...6,532,018 JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 ISO (MGI:5572888|PMID:12847223) BHF-UCL PMID:12847223 MGI:5572888 NCBI chrNW_004936476:18,659,725...18,665,406 JBrowse link
cellular response to molecule of bacterial origin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acod1 aconitate decarboxylase 1 ISO (MGI:5489057|PMID:19014335) UniProt PMID:19014335 MGI:5489057 NCBI chrNW_004936511:4,322,198...4,326,562 JBrowse link
G Cd14 CD14 molecule ISO (PMID:15039339) CAFA PMID:15039339 NCBI chrNW_004936531:9,572,392...9,575,771 JBrowse link
G Cyrib CYFIP related Rac1 interactor B ISO (PMID:31285585)
(MGI:6383257|PMID:31285585)
UniProt PMID:31285585 MGI:6383257 NCBI chrNW_004936470:18,665,898...18,803,864 JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb ISO (MGI:3608295|PMID:12385742) MGI PMID:12385742 MGI:3608295 NCBI chrNW_004937131:80,014...96,114 JBrowse link
G Fzd5 frizzled class receptor 5 ISO (PMID:16601243) BHF-UCL PMID:16601243 NCBI chrNW_004936631:3,909,046...3,915,939 JBrowse link
G Ncam1 neural cell adhesion molecule 1 ISO RGD PMID:19853610 RGD:2325979 NCBI chrNW_004936612:1,262,557...1,556,281 JBrowse link
G Sirt2 sirtuin 2 ISO (PMID:23908241) UniProtKB PMID:23908241 NCBI chrNW_004936661:1,828,868...1,849,892 JBrowse link
G Tnf tumor necrosis factor ISO streptococcal cell wall RGD PMID:1580332 RGD:38508902 NCBI chrNW_004936727:1,936,066...1,937,766 JBrowse link
G Wnt5a Wnt family member 5A ISO (MGI:4835148|PMID:16601243) BHF-UCL PMID:16601243 MGI:4835148 NCBI chrNW_004936473:6,031,627...6,052,211 JBrowse link
cellular response to peptidoglycan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Defb124 defensin beta 124 ISO (PMID:24955228) UniProt PMID:24955228 NCBI chrNW_004936485:18,498,332...18,501,477 JBrowse link
G Nlrp3 NLR family pyrin domain containing 3 ISO (MGI:5790524|PMID:27374331) CAFA PMID:27374331 MGI:5790524 NCBI chrNW_004936864:709,693...732,119 JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 ISO (MGI:3686795|PMID:16949315) RGD
MGI
PMID:16949315 PMID:24169446 MGI:3686795 RGD:13204728 NCBI chrNW_004936475:3,708,069...3,742,845 JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit ISO (PMID:24955228) UniProtKB PMID:24955228 NCBI chrNW_004936599:3,800,142...3,810,583 JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 ISO (MGI:2176422|PMID:11894098) MGI PMID:11894098 MGI:2176422 NCBI chrNW_004936544:3,606,925...3,653,248 JBrowse link
G Tlr2 toll like receptor 2 ISO (MGI:3686795|PMID:16949315) MGI PMID:16949315 MGI:3686795 NCBI chrNW_004936576:522,234...531,660 JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 ISO (MGI:5572888|PMID:12847223) BHF-UCL PMID:12847223 MGI:5572888 NCBI chrNW_004936476:18,659,725...18,665,406 JBrowse link
cellular response to triacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd14 CD14 molecule ISO (PMID:16880211) UniProtKB PMID:16880211 NCBI chrNW_004936531:9,572,392...9,575,771 JBrowse link
G Tlr1 toll like receptor 1 ISO (PMID:16880211), (PMID:19931471) UniProtKB PMID:16880211 PMID:19931471 NCBI chrNW_004936482:6,582,430...6,591,128 JBrowse link
G Tlr2 toll like receptor 2 ISO (PMID:16880211), (PMID:19931471) UniProtKB PMID:16880211 PMID:19931471 NCBI chrNW_004936576:522,234...531,660 JBrowse link
defense response to bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts4 ADAM metallopeptidase with thrombospondin type 1 motif 4 ISO (MGI:5525040|PMID:23684986) MGI PMID:23684986 MGI:5525040 NCBI chrNW_004936903:490,718...500,443 JBrowse link
G Adamts5 ADAM metallopeptidase with thrombospondin type 1 motif 5 ISO (MGI:5525040|PMID:23684986) MGI PMID:23684986 MGI:5525040 NCBI chrNW_004936640:857,565...899,355 JBrowse link
G Aicda activation induced cytidine deaminase ISO (MGI:3032861|PMID:14766966) MGI PMID:14766966 MGI:3032861 NCBI chrNW_004936870:25,039...34,601 JBrowse link
G Ankrd17 ankyrin repeat domain 17 ISO (PMID:23711367) UniProtKB PMID:23711367 NCBI chrNW_004936598:2,191,604...2,338,832 JBrowse link
G Anxa3 annexin A3 ISO (PMID:9497492) UniProtKB PMID:9497492 NCBI chrNW_004936676:2,153,752...2,216,498 JBrowse link
G Bcl3 BCL3 transcription coactivator ISO (MGI:85481|PMID:9009202) MGI PMID:9009202 MGI:85481 NCBI chrNW_004936706:1,410,848...1,427,822 JBrowse link
G Bpi bactericidal permeability increasing protein ISO RGD PMID:11445707 RGD:1331346 NCBI chrNW_004936561:3,043,520...3,069,680 JBrowse link
G Cebpe CCAAT enhancer binding protein epsilon ISO (MGI:1336504|PMID:10216107) MGI PMID:10216107 MGI:1336504 NCBI chrNW_004936722:1,207,718...1,209,482 JBrowse link
G Clec4d C-type lectin domain family 4 member D ISO (MGI:5525050|PMID:23602766) MGI PMID:23602766 MGI:5525050 NCBI chrNW_004936858:303,639...312,092 JBrowse link
G Clec4e C-type lectin domain family 4 member E ISO (MGI:5525050|PMID:23602766) MGI PMID:23602766 MGI:5525050 NCBI chrNW_004936858:316,954...321,668 JBrowse link
G Coch cochlin ISO (MGI:5525040|PMID:23684986) MGI PMID:23684986 MGI:5525040 NCBI chrNW_004936494:5,617,201...5,633,500 JBrowse link
G Colec12 collectin subfamily member 12 ISO (PMID:11564734) UniProt PMID:11564734 NCBI chrNW_004936550:169,084...350,209 JBrowse link
G Cxcl13 C-X-C motif chemokine ligand 13 ISO (PMID:17562761) BHF-UCL PMID:17562761 NCBI chrNW_004936676:1,309,625...1,314,532 JBrowse link
G Defb1 defensin beta 1 ISO (PMID:21115716) MGI PMID:21115716 NCBI chrNW_004936615:4,780,229...4,790,516 JBrowse link
G Fcer1g Fc fragment of IgE receptor Ig ISO (MGI:2683721|PMID:11237803) MGI PMID:11237803 MGI:2683721 NCBI chrNW_004936903:514,278...517,975 JBrowse link
G Hamp hepcidin antimicrobial peptide ISO (MGI:1931951|PMID:11113131)
(MGI:5502531|PMID:23390527)
MGI PMID:11113131 PMID:23390527 MGI:1931951 MGI:5502531 NCBI chrNW_004936570:1,009,344...1,010,654 JBrowse link
G Ifne interferon epsilon ISO (MGI:5493380|PMID:23449591) UniProt PMID:23449591 MGI:5493380 NCBI chrNW_004936652:3,140,568...3,141,122 JBrowse link
G Ifng interferon gamma ISO (MGI:3051174|PMID:15240719) MGI PMID:15240719 MGI:3051174 NCBI chrNW_004936545:6,139,130...6,144,543 JBrowse link
G Il10 interleukin 10 ISO (MGI:1861065|PMID:10899905) MGI PMID:10899905 MGI:1861065 NCBI chrNW_004936557:5,834,874...5,838,502 JBrowse link
G Irf8 interferon regulatory factor 8 ISO (MGI:3773503|PMID:18045875) MGI PMID:18045875 MGI:3773503 NCBI chrNW_004936641:2,608,109...2,622,446 JBrowse link
G Irgm immunity related GTPase M ISO (PMID:16888103) UniProtKB PMID:16888103 NCBI chrNW_004936504:4,055,091...4,056,089 JBrowse link
G Isg15 ISG15 ubiquitin like modifier ISO (PMID:22859821)
(MGI:5437528|PMID:22859821)
UniProtKB
UniProt
PMID:22859821 MGI:5437528 NCBI chrNW_004936737:2,043,383...2,044,761 JBrowse link
G Lcn2 lipocalin 2 ISO (PMID:27780864) UniProt PMID:27780864 NCBI chrNW_004936487:15,721,752...15,725,396 JBrowse link
G LOC101968765 interferon beta ISO (MGI:3051174|PMID:15240719) MGI PMID:15240719 MGI:3051174 NCBI chrNW_004936652:2,736,270...2,736,833 JBrowse link
G Lpo lactoperoxidase ISO (PMID:12626341) UniProtKB PMID:12626341 NCBI chrNW_004936490:4,821,421...4,838,377 JBrowse link
G Lyg2 lysozyme g2 ISO (PMID:21093056) UniProtKB PMID:21093056 NCBI chrNW_004936661:1,589,105...1,597,713 JBrowse link
G Lyst lysosomal trafficking regulator ISO (MGI:53883|PMID:4589319), (MGI:53949|PMID:4601767), (MGI:68578|PMID:7988496) MGI PMID:4589319 PMID:4601767 PMID:7988496 MGI:53883 MGI:53949 MGI:68578 NCBI chrNW_004936484:16,750,976...16,915,999 JBrowse link
G Lyz lysozyme ISO (PMID:21093056)
(MGI:2654300|PMID:12411294)
UniProtKB
UniProt
PMID:12411294 PMID:21093056 MGI:2654300 NCBI chrNW_004936545:7,165,917...7,170,840 JBrowse link
G Lyzl4 lysozyme like 4 NOT ISO (MGI:5882876|PMID:21444326) UniProt PMID:21444326 MGI:5882876 NCBI chrNW_004936695:2,668,444...2,674,605 JBrowse link
G Lyzl6 lysozyme like 6 ISO (PMID:24013621), (PMID:28182716) UniProtKB PMID:24013621 PMID:28182716 NCBI chrNW_004936541:1,801,350...1,804,767 JBrowse link
G Mavs mitochondrial antiviral signaling protein ISO (PMID:19631370) UniProtKB PMID:19631370 NCBI chrNW_004936485:14,842,778...14,859,163 JBrowse link
G Mmp7 matrix metallopeptidase 7 ISO (MGI:3698376|PMID:11248802) MGI PMID:11248802 MGI:3698376 NCBI chrNW_004936551:5,388,456...5,395,071 JBrowse link
G Mpeg1 macrophage expressed 1 ISO (PMID:26402460)
(MGI:6208630|PMID:26402460)
UniProt PMID:26402460 MGI:6208630 NCBI chrNW_004936581:3,428,515...3,436,877 JBrowse link
G Muc5b mucin 5B, oligomeric mucus/gel-forming ISO (MGI:5554612|PMID:24317696) MGI PMID:24317696 MGI:5554612 NCBI chrNW_004936816:174,943...209,241 JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor ISO (PMID:20219467) BHF-UCL PMID:20219467 NCBI chrNW_004936473:27,672,237...27,676,339 JBrowse link
G Naip NLR family apoptosis inhibitory protein ISO (MGI:5289703|PMID:21874021) UniProt PMID:21874021 MGI:5289703 NCBI chrNW_004936549:5,000,526...5,069,110 JBrowse link
G Ncf1 neutrophil cytosolic factor 1 ISO (MGI:86599|PMID:9116268)
(MGI:3718167|PMID:17526748)
MGI PMID:9116268 PMID:17526748 MGI:3718167 MGI:86599 NCBI chrNW_004936543:3,617,369...3,630,990 JBrowse link
G Nlrc4 NLR family CARD domain containing 4 ISO (PMID:15107016)
(MGI:3662989|PMID:16648853), (MGI:3662990|PMID:16648852), (MGI:5289703|PMID:21874021), (MGI:5428366|PMID:22484733), (MGI:5444805|PMID:22885697)
HGNC
UniProt
PMID:15107016 PMID:16648852 PMID:16648853 PMID:21874021 PMID:22484733 PMID:22885697 MGI:3662989 MGI:3662990 MGI:5289703 MGI:5428366 MGI:5444805 NCBI chrNW_004936493:1,189,940...1,233,408 JBrowse link
G Nlrp1 NLR family pyrin domain containing 1 ISO (MGI:3583691|PMID:16429160) MGI PMID:16429160 MGI:3583691 NCBI chrNW_004936677:2,248,153...2,290,802 JBrowse link
G Nod1 nucleotide binding oligomerization domain containing 1 ISO (PMID:15653568) HGNC PMID:15653568 NCBI chrNW_004936478:6,717,354...6,768,293 JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 ISO (PMID:15653568) HGNC PMID:15653568 NCBI chrNW_004936475:3,708,069...3,742,845 JBrowse link
G Nos2 nitric oxide synthase 2 ISO (PMID:9284131)
(MGI:2673089|PMID:12933833)
BHF-UCL
MGI
PMID:9284131 PMID:12933833 MGI:2673089 NCBI chrNW_004936538:4,052,277...4,097,051 JBrowse link
G Notch2 notch receptor 2 ISO (MGI:5562510|PMID:23913046) MGI PMID:23913046 MGI:5562510 NCBI chrNW_004936872:454,273...539,544 JBrowse link
G Nr1h4 nuclear receptor subfamily 1 group H member 4 ISO (MGI:3620334|PMID:16473946) UniProt PMID:16473946 MGI:3620334 NCBI chrNW_004936492:13,315,265...13,365,186 JBrowse link
G Plac8 placenta associated 8 ISO (MGI:3834064|PMID:17404296) MGI PMID:17404296 MGI:3834064 NCBI chrNW_004936738:1,484,905...1,503,181 JBrowse link
G Prkcd protein kinase C delta ISO (MGI:5444805|PMID:22885697) UniProt PMID:22885697 MGI:5444805 NCBI chrNW_004936473:3,892,625...3,923,467 JBrowse link
G Rab1a RAB1A, member RAS oncogene family ISO (PMID:22939626) UniProtKB PMID:22939626 NCBI chrNW_004936491:9,858,645...9,891,674 JBrowse link
G Rag2 recombination activating 2 ISO (MGI:3032861|PMID:14766966) MGI PMID:14766966 MGI:3032861 NCBI chrNW_004936533:1,801,207...1,807,431 JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region ISO (MGI:2178898|PMID:11967543) MGI PMID:11967543 MGI:2178898 NCBI chrNW_004936477:3,354,336...3,445,248 JBrowse link
G Romo1 reactive oxygen species modulator 1 ISO (PMID:22083756) UniProtKB PMID:22083756 NCBI chrNW_004936561:5,134,068...5,135,734 JBrowse link
G S100a14 S100 calcium binding protein A14 ISO (PMID:17625598) UniProtKB PMID:17625598 NCBI chrNW_004936580:3,414,315...3,416,335 JBrowse link
G Shc1 SHC adaptor protein 1 ISO (PMID:20624904) CAFA PMID:20624904 NCBI chrNW_004936580:4,511,560...4,522,003 JBrowse link
G Slamf8 SLAM family member 8 ISO (MGI:5442671|PMID:22593622) MGI PMID:22593622 MGI:5442671 NCBI chrNW_004936740:776,557...786,182 JBrowse link
G Slc11a1 solute carrier family 11 member 1 ISO (MGI:3788936|PMID:18285491)
(MGI:75899|PMID:7650477)
(MGI:3773503|PMID:18045875), (MGI:54685|PMID:385184), (MGI:60911|PMID:1541907)
MGI PMID:385184 PMID:1541907 PMID:7650477 PMID:18045875 PMID:18285491 MGI:3773503 MGI:3788936 MGI:54685 MGI:60911 MGI:75899 NCBI chrNW_004936569:888,309...895,991 JBrowse link
G Spn sialophorin ISO (PMID:10899905)
(MGI:1861065|PMID:10899905)
MGI PMID:10899905 MGI:1861065 NCBI chrNW_004936501:12,773,967...12,776,642 JBrowse link
G Spon2 spondin 2 ISO (MGI:2686801|PMID:14691481) MGI PMID:14691481 MGI:2686801 NCBI chrNW_004936477:22,087,450...22,093,677 JBrowse link
G Stab1 stabilin 1 ISO (PMID:12077138) UniProtKB PMID:12077138 NCBI chrNW_004936473:3,333,988...3,363,256 JBrowse link
G Stab2 stabilin 2 ISO (PMID:12077138) UniProtKB PMID:12077138 NCBI chrNW_004936492:10,678,074...10,817,870 JBrowse link
G Syk spleen associated tyrosine kinase ISO (MGI:4414596|PMID:19797524) UniProt PMID:19797524 MGI:4414596 NCBI chrNW_004936780:1,553,605...1,601,036 JBrowse link
G Tlr4 toll like receptor 4 ISO (PMID:30321456) ARUK-UCL PMID:30321456 NCBI chrNW_004936487:6,519,140...6,532,018 JBrowse link
G Tmf1 TATA element modulatory factor 1 ISO (MGI:5440392|PMID:22553199) MGI PMID:22553199 MGI:5440392 NCBI chrNW_004936603:1,577,519...1,602,022 JBrowse link
G Tnf tumor necrosis factor ISO (MGI:1861065|PMID:10899905) MGI PMID:10899905 MGI:1861065 NCBI chrNW_004936727:1,936,066...1,937,766 JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A ISO (MGI:1097215|PMID:9324362) MGI PMID:9324362 MGI:1097215 NCBI chrNW_004936709:1,407,327...1,421,448 JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 ISO (MGI:6201658|PMID:30232263) UniProt PMID:30232263 MGI:6201658 NCBI chrNW_004936476:18,659,725...18,665,406 JBrowse link
G Wfdc12 WAP four-disulfide core domain 12 ISO (MGI:2450032|PMID:12574366) UniProt PMID:12574366 MGI:2450032 NCBI chrNW_004936514:7,650,114...7,651,139 JBrowse link
defense response to Gram-negative bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrb1 adhesion G protein-coupled receptor B1 ISO (MGI:4939876|PMID:21245295) UniProt PMID:21245295 MGI:4939876 NCBI chrNW_004936470:9,247,749...9,313,230 JBrowse link
G Adm adrenomedullin ISO (PMID:10225288) UniProt PMID:10225288 NCBI chrNW_004936528:8,005,223...8,007,586 JBrowse link
G App amyloid beta precursor protein ISO (PMID:20209079) UniProt PMID:20209079 RGD:10400853 NCBI chrNW_004936640:1,549,977...1,787,436 JBrowse link
G Aqp1 aquaporin 1 (Colton blood group) ISO (PMID:18665841)
(MGI:4457239|PMID:18665841)
UniProt PMID:18665841 MGI:4457239 NCBI chrNW_004936478:7,146,997...7,160,369 JBrowse link
G B2m beta-2-microglobulin ISO (PMID:23144825) UniProt PMID:23144825 NCBI chrNW_004936471:7,646,504...7,655,656 JBrowse link
G Bpi bactericidal permeability increasing protein ISO (PMID:1937776) UniProt PMID:1937776 NCBI chrNW_004936561:3,043,520...3,069,680 JBrowse link
G Cd160 CD160 molecule ISO (MGI:5432939|PMID:22801499) MGI PMID:22801499 MGI:5432939 NCBI chrNW_004936867:478,625...485,905 JBrowse link
G Cd4 CD4 molecule ISO (MGI:2683356|PMID:14688352) MGI PMID:14688352 MGI:2683356 NCBI chrNW_004936709:997,776...1,022,791 JBrowse link
G Chga chromogranin A ISO (PMID:15723172) UniProtKB PMID:15723172 NCBI chrNW_004936733:915,700...927,220 JBrowse link
G Cst11 cystatin 11 ISO (PMID:12072414) UniProtKB PMID:12072414 NCBI chrNW_004936620:2,115,927...2,119,683 JBrowse link
G Defb1 defensin beta 1 ISO (PMID:25122636) UniProtKB PMID:25122636 NCBI chrNW_004936615:4,780,229...4,790,516 JBrowse link
G Defb114 defensin beta 114 ISO (PMID:23482568) UniProtKB PMID:23482568 NCBI chrNW_004936476:10,651,162...10,657,785 JBrowse link
G Defb127 defensin beta 127 ISO (PMID:19373462) UniProtKB PMID:19373462 NCBI chrNW_004936485:18,255,550...18,257,277 JBrowse link
G Defb128 defensin beta 128 ISO (PMID:15625724) UniProtKB PMID:15625724 NCBI chrNW_004936485:18,238,442...18,240,625 JBrowse link
G Dmbt1 deleted in malignant brain tumors 1 ISO (PMID:11007786)
(MGI:2670828|PMID:12884308)
UniProt PMID:11007786 PMID:12884308 MGI:2670828 NCBI chrNW_004936486:11,377,485...11,545,624 JBrowse link
G Drosha drosha ribonuclease III ISO (PMID:20180804) UniProtKB PMID:20180804 NCBI chrNW_004936518:9,100,094...9,218,405 JBrowse link
G Gsdmd gasdermin D ISO (MGI:5796057|PMID:27383986) UniProt PMID:27383986 MGI:5796057 NCBI chrNW_004936470:8,567,085...8,571,448 JBrowse link
G Hamp hepcidin antimicrobial peptide ISO (PMID:11034317), (PMID:11113131) UniProt PMID:11034317 PMID:11113131 NCBI chrNW_004936570:1,009,344...1,010,654 JBrowse link
G Hmgb2 high mobility group box 2 ISO (PMID:23877675) AgBase PMID:23877675 NCBI chrNW_004936516:4,536,664...4,539,331 JBrowse link
G Il12b interleukin 12B ISO (PMID:15114670), (PMID:20027291) BHF-UCL PMID:15114670 PMID:20027291 NCBI chrNW_004936515:4,056,214...4,066,121 JBrowse link
G Il17a interleukin 17A ISO (MGI:3828868|PMID:19144317) UniProt PMID:19144317 MGI:3828868 NCBI chrNW_004936476:8,621,860...8,625,008 JBrowse link
G Il17f interleukin 17F ISO (MGI:3828868|PMID:19144317) UniProt PMID:19144317 MGI:3828868 NCBI chrNW_004936476:8,579,282...8,580,916 JBrowse link
G Il22ra1 interleukin 22 receptor subunit alpha 1 ISO (MGI:5432939|PMID:22801499) MGI PMID:22801499 MGI:5432939 NCBI chrNW_004936474:9,184,559...9,201,918 JBrowse link
G Il23a interleukin 23 subunit alpha ISO (PMID:15114670), (PMID:20027291) BHF-UCL PMID:15114670 PMID:20027291 NCBI chrNW_004936646:743,630...745,998 JBrowse link
G Irgm immunity related GTPase M ISO (PMID:25891078) UniProtKB PMID:25891078 NCBI chrNW_004936504:4,055,091...4,056,089 JBrowse link
G Lbp lipopolysaccharide binding protein ISO (PMID:11528597)
(MGI:1097829|PMID:9338787)
(MGI:3719540|PMID:12055258)
BHF-UCL
MGI
PMID:9338787 PMID:11528597 PMID:12055258 MGI:1097829 MGI:3719540 NCBI chrNW_004936561:3,017,471...3,035,481 JBrowse link
G LOC101955647 beta-defensin 121 ISO (PMID:24449502) UniProt PMID:24449502 NCBI chrNW_004936485:18,426,481...18,427,866 JBrowse link
G LOC101956249 optineurin ISO (PMID:21617041) UniProtKB PMID:21617041 NCBI chrNW_004936862:488,591...516,819 JBrowse link
G LOC101963795 60S ribosomal protein L30 ISO (PMID:15019208) UniProtKB PMID:15019208 NCBI chrNW_004936493:7,942,669...7,943,133 JBrowse link
G LOC101972633 major histocompatibility complex class I-related gene protein ISO (PMID:20581831)
(MGI:4888422|PMID:21190736)
(MGI:4818706|PMID:20581831)
UniProt
MGI
PMID:20581831 PMID:21190736 MGI:4818706 MGI:4888422 NCBI chrNW_004936481:8,325,918...8,347,941 JBrowse link
G Ltf lactotransferrin ISO (PMID:15155221), (PMID:9596699) UniProt PMID:9596699 PMID:15155221 NCBI chrNW_004936596:344,287...373,788 JBrowse link
G Lypd8 LY6/PLAUR domain containing 8 ISO (MGI:5779978|PMID:27027293) UniProt PMID:27027293 MGI:5779978 NCBI chrNW_004936609:339,319...342,625 JBrowse link
G Lyz lysozyme ISO (MGI:3042773|PMID:14977423) RGD
UniProt
PMID:2840982 PMID:14977423 MGI:3042773 RGD:1599862 NCBI chrNW_004936545:7,165,917...7,170,840 JBrowse link
G Lyzl4 lysozyme like 4 NOT ISO PMID:22110709 UniProt PMID:22110709 RGD:12793004 NCBI chrNW_004936695:2,668,444...2,674,605 JBrowse link
G Mmp7 matrix metallopeptidase 7 ISO (MGI:3698376|PMID:11248802) MGI PMID:11248802 MGI:3698376 NCBI chrNW_004936551:5,388,456...5,395,071 JBrowse link
G Mpeg1 macrophage expressed 1 ISO (PMID:23753625)
(MGI:6294207|PMID:23753625), (MGI:6294210|PMID:23257510)
UniProt PMID:23257510 PMID:23753625 MGI:6294207 MGI:6294210 NCBI chrNW_004936581:3,428,515...3,436,877 JBrowse link
G Nlrp10 NLR family pyrin domain containing 10 ISO (PMID:22672233) UniProtKB PMID:22672233 NCBI chrNW_004936528:9,938,270...9,969,115 JBrowse link
G Nos2 nitric oxide synthase 2 ISO RGD PMID:16865779 RGD:1582113 NCBI chrNW_004936538:4,052,277...4,097,051 JBrowse link
G Npy neuropeptide Y ISO (PMID:18603306) UniProt PMID:18603306 NCBI chrNW_004936478:1,289,437...1,296,819 JBrowse link
G Peli3 pellino E3 ubiquitin protein ligase family member 3 ISO (MGI:5562512|PMID:23892723) MGI PMID:23892723 MGI:5562512 NCBI chrNW_004936599:3,099,256...3,110,566 JBrowse link
G Prkd1 protein kinase D1 ISO (MGI:5787845|PMID:27184844) UniProt PMID:27184844 MGI:5787845 NCBI chrNW_004936494:4,469,092...4,601,183 JBrowse link
G Pycard PYD and CARD domain containing ISO (PMID:16982856), (PMID:21487011) UniProtKB PMID:16982856 PMID:21487011 NCBI chrNW_004936501:13,550,702...13,552,774 JBrowse link
G Rarres2 retinoic acid receptor responder 2 ISO (PMID:23527010) UniProtKB PMID:23527010 NCBI chrNW_004936527:5,949,161...5,952,367 JBrowse link
G Reg3g regenerating family member 3 gamma ISO (MGI:5897756|PMID:16931762) UniProt PMID:16931762 MGI:5897756 NCBI chrNW_004936556:4,896,141...4,898,240 JBrowse link
G Rnase6 ribonuclease A family member k6 ISO (PMID:25075772)
(MGI:5902674|PMID:25075772)
UniProtKB
UniProt
PMID:25075772 MGI:5902674 NCBI chrNW_004936880:78,532...79,342 JBrowse link
G Romo1 reactive oxygen species modulator 1 ISO (PMID:22083756) UniProtKB PMID:22083756 NCBI chrNW_004936561:5,134,068...5,135,734 JBrowse link
G Rps19 ribosomal protein S19 ISO (PMID:15019208) UniProtKB PMID:15019208 NCBI chrNW_004936706:568,443...575,973 JBrowse link
G Serpine1 serpin family E member 1 ISO (PMID:17032919)
(MGI:3830955|PMID:17032919)
BHF-UCL PMID:17032919 MGI:3830955 NCBI chrNW_004936543:1,032,543...1,040,956 JBrowse link
G Slc11a1 solute carrier family 11 member 1 ISO (MGI:55719|PMID:6358358) MGI PMID:6358358 MGI:55719 NCBI chrNW_004936569:888,309...895,991 JBrowse link
G Ssc5d scavenger receptor cysteine rich family member with 5 domains ISO (MGI:4939978|PMID:21217009) UniProt PMID:21217009 MGI:4939978 NCBI chrNW_004936886:715,159...734,428 JBrowse link
G Tac1 tachykinin precursor 1 ISO (PMID:18603306) UniProt PMID:18603306 NCBI chrNW_004936585:2,932,783...2,941,141 JBrowse link
G Tfeb transcription factor EB ISO (MGI:5787845|PMID:27184844) UniProt PMID:27184844 MGI:5787845 NCBI chrNW_004936476:18,189,096...18,233,622 JBrowse link
G Tlr4 toll like receptor 4 ISO (MGI:3530402|PMID:15661922) MGI PMID:15661922 MGI:3530402 NCBI chrNW_004936487:6,519,140...6,532,018 JBrowse link
G Tnfrsf14 TNF receptor superfamily member 14 ISO (MGI:5432939|PMID:22801499) MGI PMID:22801499 MGI:5432939 NCBI chrNW_004936737:1,008,228...1,013,575 JBrowse link
G Tslp thymic stromal lymphopoietin ISO (PMID:24850429) UniProtKB PMID:24850429 NCBI chrNW_004936531:5,495,872...5,500,462 JBrowse link
G Tusc2 tumor suppressor 2, mitochondrial calcium regulator ISO (MGI:5518492|PMID:24042119) MGI PMID:24042119 MGI:5518492 NCBI chrNW_004936529:1,853,092...1,856,027 JBrowse link
G Umod uromodulin ISO (MGI:3525980|PMID:14665435), (MGI:3574968|PMID:14871399) MGI PMID:14665435 PMID:14871399 MGI:3525980 MGI:3574968 NCBI chrNW_004936501:5,833,391...5,846,021 JBrowse link
G Vip vasoactive intestinal peptide ISO (PMID:18603306) UniProt PMID:18603306 NCBI chrNW_004936489:5,425,778...5,434,483 JBrowse link
defense response to Gram-positive bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acp5 acid phosphatase 5, tartrate resistant ISO (MGI:1930064|PMID:11168643) MGI PMID:11168643 MGI:1930064 NCBI chrNW_004936659:1,598,252...1,642,615 JBrowse link
G Adam17 ADAM metallopeptidase domain 17 ISO (PMID:16034137) BHF-UCL PMID:16034137 NCBI chrNW_004936532:5,864,851...5,904,005 JBrowse link
G Adm adrenomedullin ISO (PMID:10225288) UniProt PMID:10225288 NCBI chrNW_004936528:8,005,223...8,007,586 JBrowse link
G Ang angiogenin ISO (PMID:12548285)
(MGI:2652649|PMID:12548285)
UniProt PMID:12548285 MGI:2652649 NCBI chrNW_004936880:39,372...40,070 JBrowse link
G App amyloid beta precursor protein ISO (PMID:20209079) UniProt PMID:20209079 RGD:10400853 NCBI chrNW_004936640:1,549,977...1,787,436 JBrowse link
G B2m beta-2-microglobulin ISO (PMID:23144825) UniProt PMID:23144825 NCBI chrNW_004936471:7,646,504...7,655,656 JBrowse link
G C5ar1 complement C5a receptor 1 ISO (MGI:3814295|PMID:17114491) MGI PMID:17114491 MGI:3814295 NCBI chrNW_004936664:1,026,216...1,033,438 JBrowse link
G Card9 caspase recruitment domain family member 9 ISO (MGI:3697751|PMID:17187069) MGI PMID:17187069 MGI:3697751 NCBI chrNW_004936669:1,428,208...1,438,012 JBrowse link
G Cd36 CD36 molecule ISO (MGI:3528769|PMID:15690042)
(MGI:3587138|PMID:16061696)
MGI PMID:15690042 PMID:16061696 MGI:3528769 MGI:3587138 NCBI chrNW_004936810:791,823...838,303 JBrowse link
G Chga chromogranin A ISO (PMID:15723172) UniProtKB PMID:15723172 NCBI chrNW_004936733:915,700...927,220 JBrowse link
G CUNH10orf99 chromosome unknown C10orf99 homolog ISO (PMID:25585381) UniProtKB PMID:25585381 NCBI chrNW_004936767:790,152...798,265 JBrowse link
G Defb1 defensin beta 1 ISO (PMID:12860195)
(PMID:25122636)
UniProtKB PMID:12860195 PMID:25122636 NCBI chrNW_004936615:4,780,229...4,790,516 JBrowse link
G Defb114 defensin beta 114 ISO (PMID:23482568) UniProtKB PMID:23482568 NCBI chrNW_004936476:10,651,162...10,657,785 JBrowse link
G Defb128 defensin beta 128 ISO (PMID:15625724) UniProtKB PMID:15625724 NCBI chrNW_004936485:18,238,442...18,240,625 JBrowse link
G Dmbt1 deleted in malignant brain tumors 1 ISO (PMID:11007786), (PMID:19189310)
(MGI:2670828|PMID:12884308)
UniProt PMID:11007786 PMID:12884308 PMID:19189310 MGI:2670828 NCBI chrNW_004936486:11,377,485...11,545,624 JBrowse link
G Drosha drosha ribonuclease III ISO (PMID:20180804) UniProtKB PMID:20180804 NCBI chrNW_004936518:9,100,094...9,218,405 JBrowse link
G Epha2 EPH receptor A2 ISO (MGI:3847147|PMID:19443703) MGI PMID:19443703 MGI:3847147 NCBI chrNW_004936474:3,648,395...3,673,856 JBrowse link
G Fau FAU ubiquitin like and ribosomal protein S30 fusion ISO (PMID:12860195)
(MGI:5897760|PMID:10496312)
UniProtKB
UniProt
PMID:10496312 PMID:12860195 MGI:5897760 NCBI chrNW_004936599:4,246,681...4,248,142 JBrowse link
G Fgr FGR proto-oncogene, Src family tyrosine kinase ISO (MGI:65050|PMID:8125254) MGI
UniProt
PMID:8125254 MGI:65050 NCBI chrNW_004936474:11,897,998...11,919,153 JBrowse link
G Gsdmd gasdermin D ISO (MGI:5796057|PMID:27383986) UniProt PMID:27383986 MGI:5796057 NCBI chrNW_004936470:8,567,085...8,571,448 JBrowse link
G Hamp hepcidin antimicrobial peptide ISO (PMID:11034317), (PMID:11113131) UniProt PMID:11034317 PMID:11113131 NCBI chrNW_004936570:1,009,344...1,010,654 JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 ISO (MGI:5568873|PMID:24567532) UniProt PMID:24567532 MGI:5568873 NCBI chrNW_004936515:6,001,324...6,015,407 JBrowse link
G Hck HCK proto-oncogene, Src family tyrosine kinase ISO (MGI:65050|PMID:8125254) MGI PMID:8125254 MGI:65050 NCBI chrNW_004936485:18,996,016...19,017,908 JBrowse link
G Hmgb2 high mobility group box 2 ISO (PMID:23877675) AgBase PMID:23877675 NCBI chrNW_004936516:4,536,664...4,539,331 JBrowse link
G Il12a interleukin 12A ISO (PMID:1357073) UniProtKB PMID:1357073 NCBI chrNW_004936519:6,166,060...6,180,652 JBrowse link
G Il17a interleukin 17A ISO (MGI:4459373|PMID:20364087)
(MGI:3828868|PMID:19144317)
UniProt PMID:19144317 PMID:20364087 MGI:3828868 MGI:4459373 NCBI chrNW_004936476:8,621,860...8,625,008 JBrowse link
G Il17f interleukin 17F ISO (MGI:3828868|PMID:19144317) UniProt PMID:19144317 MGI:3828868 NCBI chrNW_004936476:8,579,282...8,580,916 JBrowse link
G Il27ra interleukin 27 receptor subunit alpha ISO (MGI:1926579|PMID:11057672) MGI PMID:11057672 MGI:1926579 NCBI chrNW_004936659:2,706,037...2,720,486 JBrowse link
G Il7r interleukin 7 receptor ISO (MGI:4459373|PMID:20364087) UniProt PMID:20364087 MGI:4459373 NCBI chrNW_004936518:5,815,820...5,842,571 JBrowse link
G Krt6a keratin 6A ISO (PMID:23006328)
(MGI:5466437|PMID:23006328)
UniProtKB
UniProt
PMID:23006328 MGI:5466437 NCBI chrNW_004936512:9,903,206...9,908,009 JBrowse link
G Lbp lipopolysaccharide binding protein ISO (PMID:12932360)
(MGI:3807766|PMID:12932360)
BHF-UCL PMID:12932360 MGI:3807766 NCBI chrNW_004936561:3,017,471...3,035,481 JBrowse link
G LOC101955647 beta-defensin 121 ISO (PMID:24449502) UniProt PMID:24449502 NCBI chrNW_004936485:18,426,481...18,427,866 JBrowse link
G LOC101967584 histone H2B type 2-E ISO (PMID:12860195) UniProtKB PMID:12860195 NCBI chrNW_004936580:217,772...220,559 JBrowse link
G LOC101972633 major histocompatibility complex class I-related gene protein ISO (PMID:27527800) UniProt PMID:27527800 NCBI chrNW_004936481:8,325,918...8,347,941 JBrowse link
G Lta lymphotoxin alpha ISO (MGI:3690573|PMID:9834074) MGI PMID:9834074 MGI:3690573 NCBI chrNW_004936727:1,940,081...1,941,022 JBrowse link
G Ltf lactotransferrin ISO (PMID:9596699) UniProt PMID:9596699 NCBI chrNW_004936596:344,287...373,788 JBrowse link
G Lyg2 lysozyme g2 ISO (PMID:21093056) UniProtKB PMID:21093056 NCBI chrNW_004936661:1,589,105...1,597,713 JBrowse link
G Lyz lysozyme ISO (MGI:3042773|PMID:14977423)
(PMID:21093056)
RGD
UniProt
UniProtKB
PMID:2840982 PMID:14977423 PMID:21093056 MGI:3042773 RGD:1599862 NCBI chrNW_004936545:7,165,917...7,170,840 JBrowse link
G Mmp7 matrix metallopeptidase 7 ISO (MGI:3698376|PMID:11248802) MGI PMID:11248802 MGI:3698376 NCBI chrNW_004936551:5,388,456...5,395,071 JBrowse link
G Mpeg1 macrophage expressed 1 ISO (PMID:30609079)
(MGI:6294210|PMID:23257510)
UniProt PMID:23257510 PMID:30609079 MGI:6294210 NCBI chrNW_004936581:3,428,515...3,436,877 JBrowse link
G Mpo myeloperoxidase NOT ISO (MGI:1333719|PMID:10085024) MGI PMID:10085024 MGI:1333719 NCBI chrNW_004936490:4,809,773...4,819,070 JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor ISO (MGI:3760234|PMID:17635956)
(MGI:3619313|PMID:11067888)
UniProt
MGI
PMID:11067888 PMID:17635956 MGI:3619313 MGI:3760234 NCBI chrNW_004936473:27,672,237...27,676,339 JBrowse link
G Myo1f myosin IF ISO (MGI:3664353|PMID:17023661) MGI PMID:17023661 MGI:3664353 NCBI chrNW_004936588:5,299,977...5,331,065 JBrowse link
G Ncf1 neutrophil cytosolic factor 1 ISO (MGI:4353632|PMID:11907569) MGI PMID:11907569 MGI:4353632 NCBI chrNW_004936543:3,617,369...3,630,990 JBrowse link
G Nlrp3 NLR family pyrin domain containing 3 ISO (MGI:5790524|PMID:27374331) CAFA PMID:27374331 MGI:5790524 NCBI chrNW_004936864:709,693...732,119 JBrowse link
G Nod1 nucleotide binding oligomerization domain containing 1 ISO (MGI:3775161|PMID:18261938) MGI PMID:18261938 MGI:3775161 NCBI chrNW_004936478:6,717,354...6,768,293 JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 ISO (MGI:3528786|PMID:15692051), (MGI:3775161|PMID:18261938), (MGI:3839525|PMID:19139201)
(MGI:3775161|PMID:18261938)
MGI PMID:15692051 PMID:18261938 PMID:19139201 MGI:3528786 MGI:3775161 MGI:3839525 NCBI chrNW_004936475:3,708,069...3,742,845 JBrowse link
G Npy neuropeptide Y ISO (PMID:18603306) UniProt PMID:18603306 NCBI chrNW_004936478:1,289,437...1,296,819 JBrowse link
G P2rx7 purinergic receptor P2X 7 ISO (MGI:3699774|PMID:11544318) MGI PMID:11544318 MGI:3699774 NCBI chrNW_004936558:3,106,819...3,149,689 JBrowse link
G Pglyrp1 peptidoglycan recognition protein 1 ISO (PMID:11461926), (PMID:16354652) UniProtKB PMID:11461926 PMID:16354652 NCBI chrNW_004936706:2,317,137...2,320,993 JBrowse link
G Pglyrp2 peptidoglycan recognition protein 2 ISO (PMID:11461926) UniProtKB PMID:11461926 NCBI chrNW_004936596:5,038,452...5,043,172 JBrowse link
G Pla2g1b phospholipase A2 group IB ISO (PMID:12860195) UniProtKB PMID:12860195 NCBI chrNW_004936668:608,848...616,982 JBrowse link
G Pla2g2a phospholipase A2 group IIA ISO (PMID:10358193) UniProt PMID:10358193 NCBI chrNW_004936474:6,091,978...6,095,961 JBrowse link
G Pld1 phospholipase D1 ISO (MGI:3699774|PMID:11544318) MGI PMID:11544318 MGI:3699774 NCBI chrNW_004936593:844,634...1,049,478 JBrowse link
G Ppp1r11 protein phosphatase 1 regulatory inhibitor subunit 11 ISO (MGI:6094454|PMID:27805901) UniProt PMID:27805901 MGI:6094454 NCBI chrNW_004936723:973,516...975,930 JBrowse link
G Rarres2 retinoic acid receptor responder 2 ISO (PMID:23527010) UniProtKB PMID:23527010 NCBI chrNW_004936527:5,949,161...5,952,367 JBrowse link
G Reg3g regenerating family member 3 gamma ISO (MGI:3760234|PMID:17635956)
(MGI:5488544|PMID:23401489), (MGI:5897756|PMID:16931762)
UniProt PMID:16931762 PMID:17635956 PMID:23401489 MGI:3760234 MGI:5488544 MGI:5897756 NCBI chrNW_004936556:4,896,141...4,898,240 JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 ISO (MGI:2176422|PMID:11894098), (MGI:3775161|PMID:18261938)
(MGI:2176424|PMID:11894097)
MGI PMID:11894097 PMID:11894098 PMID:18261938 MGI:2176422 MGI:2176424 MGI:3775161 NCBI chrNW_004936544:3,606,925...3,653,248 JBrowse link
G Rnase6 ribonuclease A family member k6 ISO (PMID:25075772)
(MGI:5902674|PMID:25075772)
UniProtKB
UniProt
PMID:25075772 MGI:5902674 NCBI chrNW_004936880:78,532...79,342 JBrowse link
G Romo1 reactive oxygen species modulator 1 ISO (PMID:22083756) UniProtKB PMID:22083756 NCBI chrNW_004936561:5,134,068...5,135,734 JBrowse link
G Rpl39 ribosomal protein L39 ISO (PMID:12860195) UniProtKB PMID:12860195 NCBI chrNW_004936479:10,132,965...10,136,506 JBrowse link
G Seh1l SEH1 like nucleoporin ISO (MGI:4830383|PMID:20824097) MGI PMID:20824097 MGI:4830383 NCBI chrNW_004936626:2,538,655...2,562,468 JBrowse link
G Ssc5d scavenger receptor cysteine rich family member with 5 domains ISO (MGI:4939978|PMID:21217009) UniProt PMID:21217009 MGI:4939978 NCBI chrNW_004936886:715,159...734,428 JBrowse link
G Stab2 stabilin 2 ISO (PMID:11829752) UniProtKB PMID:11829752 NCBI chrNW_004936492:10,678,074...10,817,870 JBrowse link
G Tac1 tachykinin precursor 1 ISO (PMID:18603306) UniProt PMID:18603306 NCBI chrNW_004936585:2,932,783...2,941,141 JBrowse link
G Tbk1 TANK binding kinase 1 ISO (MGI:3530402|PMID:15661922) MGI PMID:15661922 MGI:3530402 NCBI chrNW_004936545:2,763,755...2,809,229 JBrowse link
G Tirap TIR domain containing adaptor protein ISO (MGI:3528769|PMID:15690042) MGI PMID:15690042 MGI:3528769 NCBI chrNW_004936572:5,926,193...5,938,621 JBrowse link
G Tlr2 toll like receptor 2 ISO (PMID:11521063)
(MGI:3528769|PMID:15690042), (MGI:3839525|PMID:19139201)
(MGI:3619313|PMID:11067888)
UniProtKB
MGI
PMID:11067888 PMID:11521063 PMID:15690042 PMID:19139201 MGI:3528769 MGI:3619313 MGI:3839525 NCBI chrNW_004936576:522,234...531,660 JBrowse link
G Tnf tumor necrosis factor ISO (MGI:3690573|PMID:9834074) MGI PMID:9834074 MGI:3690573 NCBI chrNW_004936727:1,936,066...1,937,766 JBrowse link
G Tnfaip8 TNF alpha induced protein 8 ISO (MGI:4830383|PMID:20824097) MGI PMID:20824097 MGI:4830383 NCBI chrNW_004936715:2,205,977...2,322,835 JBrowse link
G Tnfrsf14 TNF receptor superfamily member 14 ISO (MGI:5432939|PMID:22801499) MGI PMID:22801499 MGI:5432939 NCBI chrNW_004936737:1,008,228...1,013,575 JBrowse link
G Tnfsf8 TNF superfamily member 8 ISO (MGI:3700858|PMID:16177108) MGI PMID:16177108 MGI:3700858 NCBI chrNW_004936487:4,057,637...4,081,207 JBrowse link
G Vip vasoactive intestinal peptide ISO (PMID:18603306) UniProt PMID:18603306 NCBI chrNW_004936489:5,425,778...5,434,483 JBrowse link
G Zg16 zymogen granule protein 16 ISO (MGI:5824939|PMID:27849619) MGI PMID:27849619 MGI:5824939 NCBI chrNW_004936501:12,699,197...12,700,697 JBrowse link
detection of bacterial lipoprotein term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ssc5d scavenger receptor cysteine rich family member with 5 domains ISO (MGI:4939978|PMID:21217009) UniProt PMID:21217009 MGI:4939978 NCBI chrNW_004936886:715,159...734,428 JBrowse link
detection of bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Naip NLR family apoptosis inhibitory protein ISO (MGI:5289703|PMID:21874021) UniProt PMID:21874021 MGI:5289703 NCBI chrNW_004936549:5,000,526...5,069,110 JBrowse link
G Nlrc4 NLR family CARD domain containing 4 ISO (PMID:15107016)
(MGI:5444805|PMID:22885697)
HGNC
UniProt
PMID:15107016 PMID:22885697 MGI:5444805 NCBI chrNW_004936493:1,189,940...1,233,408 JBrowse link
G Nod1 nucleotide binding oligomerization domain containing 1 ISO (PMID:15653568) HGNC PMID:15653568 NCBI chrNW_004936478:6,717,354...6,768,293 JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 ISO (PMID:15653568) HGNC PMID:15653568 NCBI chrNW_004936475:3,708,069...3,742,845 JBrowse link
G Parg poly(ADP-ribose) glycohydrolase ISO (MGI:3052258|PMID:15282315) MGI PMID:15282315 MGI:3052258 NCBI chrNW_004936728:428,028...538,413 JBrowse link
G Pglyrp1 peptidoglycan recognition protein 1 ISO (PMID:11461926) UniProtKB PMID:11461926 NCBI chrNW_004936706:2,317,137...2,320,993 JBrowse link
G Pglyrp2 peptidoglycan recognition protein 2 ISO (PMID:11461926) UniProtKB PMID:11461926 NCBI chrNW_004936596:5,038,452...5,043,172 JBrowse link
detection of diacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tlr2 toll like receptor 2 ISO (PMID:19931471) MGI PMID:19931471 NCBI chrNW_004936576:522,234...531,660 JBrowse link
G Tlr6 toll like receptor 6 ISO (PMID:19931471) MGI PMID:19931471 NCBI chrNW_004936482:6,607,723...6,610,161 JBrowse link
detection of lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ly96 lymphocyte antigen 96 ISO (PMID:19252480) UniProtKB PMID:19252480 NCBI chrNW_004936648:2,653,252...2,671,453 JBrowse link
G Scarb1 scavenger receptor class B member 1 ISO (PMID:12651854) BHF-UCL PMID:12651854 NCBI chrNW_004936558:530,828...555,098 JBrowse link
G Tlr4 toll like receptor 4 ISO (PMID:19252480)
(MGI:5913054|PMID:28098138)
UniProtKB
UniProt
PMID:19252480 PMID:28098138 MGI:5913054 NCBI chrNW_004936487:6,519,140...6,532,018 JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 ISO (MGI:5572888|PMID:12847223) BHF-UCL PMID:12847223 MGI:5572888 NCBI chrNW_004936476:18,659,725...18,665,406 JBrowse link
detection of lipoteichoic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trem2 triggering receptor expressed on myeloid cells 2 ISO (MGI:5572888|PMID:12847223) BHF-UCL PMID:12847223 MGI:5572888 NCBI chrNW_004936476:18,659,725...18,665,406 JBrowse link
detection of molecule of bacterial origin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lbp lipopolysaccharide binding protein ISO (PMID:11528597) BHF-UCL PMID:11528597 NCBI chrNW_004936561:3,017,471...3,035,481 JBrowse link
detection of muramyl dipeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide binding oligomerization domain containing 2 ISO (PMID:12527755), (PMID:15998797) MGI PMID:12527755 PMID:15998797 NCBI chrNW_004936475:3,708,069...3,742,845 JBrowse link
detection of peptidoglycan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trem2 triggering receptor expressed on myeloid cells 2 ISO (MGI:5572888|PMID:12847223) BHF-UCL PMID:12847223 MGI:5572888 NCBI chrNW_004936476:18,659,725...18,665,406 JBrowse link
detection of triacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tlr1 toll like receptor 1 ISO (PMID:19931471) MGI PMID:19931471 NCBI chrNW_004936482:6,582,430...6,591,128 JBrowse link
G Tlr2 toll like receptor 2 ISO (PMID:19931471) MGI PMID:19931471 NCBI chrNW_004936576:522,234...531,660 JBrowse link
induced systemic resistance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myd88 MYD88 innate immune signal transduction adaptor ISO (MGI:5637650|PMID:25084278) MGI PMID:25084278 MGI:5637650 NCBI chrNW_004936473:27,672,237...27,676,339 JBrowse link
induction of bacterial agglutination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmbt1 deleted in malignant brain tumors 1 ISO (PMID:11007786), (PMID:19189310) UniProt PMID:11007786 PMID:19189310 NCBI chrNW_004936486:11,377,485...11,545,624 JBrowse link
G Fga fibrinogen alpha chain ISO (PMID:24367264) CACAO PMID:24367264 NCBI chrNW_004936576:1,322,406...1,329,743 JBrowse link
G Fgb fibrinogen beta chain ISO (PMID:24367264) CACAO PMID:24367264 NCBI chrNW_004936576:1,306,076...1,313,485 JBrowse link
G Sftpd surfactant protein D ISO (PMID:28228557) AgBase PMID:28228557 NCBI chrNW_004936716:60,754...73,010 JBrowse link
G Spon2 spondin 2 ISO (MGI:2686801|PMID:14691481) MGI PMID:14691481 MGI:2686801 NCBI chrNW_004936477:22,087,450...22,093,677 JBrowse link
lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 ISO (MGI:5604854|PMID:24740015) MGI PMID:24740015 MGI:5604854 NCBI chrNW_004936621:620,163...639,115 JBrowse link
G Bcl10 BCL10 immune signaling adaptor ISO (PMID:16831874) UniProt PMID:16831874 NCBI chrNW_004936608:434,740...442,162 JBrowse link
G Ccl5 C-C motif chemokine ligand 5 ISO (PMID:21147091) UniProtKB PMID:21147091 NCBI chrNW_004936490:253,279...259,947 JBrowse link
G Cd14 CD14 molecule ISO (MGI:5645195|PMID:24380872) UniProt PMID:24380872 MGI:5645195 NCBI chrNW_004936531:9,572,392...9,575,771 JBrowse link
G Cd6 CD6 molecule ISO (PMID:17601777) UniProtKB PMID:17601777 NCBI chrNW_004936581:1,932,596...1,943,671 JBrowse link
G Il18 interleukin 18 ISO (PMID:21147091) UniProtKB PMID:21147091 NCBI chrNW_004936612:2,306,963...2,325,086 JBrowse link
G Il1b interleukin 1 beta ISO (PMID:21147091) UniProtKB PMID:21147091 NCBI chrNW_004936783:1,251,678...1,256,807 JBrowse link
G Irak1 interleukin 1 receptor associated kinase 1 ISO (PMID:10383454)
(MGI:2178646|PMID:10549626), (MGI:2669022|PMID:12855817)
BHF-UCL
MGI
PMID:10383454 PMID:10549626 PMID:12855817 MGI:2178646 MGI:2669022 NCBI chrNW_004936809:891,407...900,311 JBrowse link
G Irak2 interleukin 1 receptor associated kinase 2 ISO (MGI:3046371|PMID:15082713) MGI PMID:15082713 MGI:3046371 NCBI chrNW_004936602:3,073,910...3,129,344 JBrowse link
G Irf3 interferon regulatory factor 3 ISO (MGI:2669022|PMID:12855817), (MGI:2670551|PMID:12872135) MGI PMID:12855817 PMID:12872135 MGI:2669022 MGI:2670551 NCBI chrNW_004936664:3,477,750...3,482,489 JBrowse link
G Lbp lipopolysaccharide binding protein ISO (PMID:11739189), (PMID:8409400) BHF-UCL PMID:8409400 PMID:11739189 NCBI chrNW_004936561:3,017,471...3,035,481 JBrowse link
G Ly96 lymphocyte antigen 96 ISO (MGI:5645195|PMID:24380872) UniProt PMID:24380872 MGI:5645195 NCBI chrNW_004936648:2,653,252...2,671,453 JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase ISO (MGI:4456928|PMID:20385881) UniProt PMID:20385881 MGI:4456928 NCBI chrNW_004936496:2,578,598...2,698,165 JBrowse link
G Malt1 MALT1 paracaspase ISO (MGI:3694380|PMID:16831874) UniProt PMID:16831874 MGI:3694380 NCBI chrNW_004936497:5,854,361...5,910,719 JBrowse link
G Mapk1 mitogen-activated protein kinase 1 ISO (MGI:2670551|PMID:12872135) MGI PMID:12872135 MGI:2670551 NCBI chrNW_004936619:1,889,841...1,932,646 JBrowse link
G Mapk14 mitogen-activated protein kinase 14 ISO (MGI:2670551|PMID:12872135) MGI PMID:12872135 MGI:2670551 NCBI chrNW_004936476:23,237,762...23,310,211 JBrowse link
G Mapk3 mitogen-activated protein kinase 3 ISO (MGI:2670551|PMID:12872135) MGI PMID:12872135 MGI:2670551 NCBI chrNW_004936501:12,342,670...12,390,650 JBrowse link
G Mtdh metadherin ISO (PMID:19740331) UniProtKB PMID:19740331 NCBI chrNW_004936470:45,016,099...45,079,709 JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor ISO (MGI:2669022|PMID:12855817) MGI PMID:12855817 MGI:2669022 NCBI chrNW_004936473:27,672,237...27,676,339 JBrowse link
G Nfkbia NFKB inhibitor alpha ISO (MGI:2670551|PMID:12872135), (MGI:3775161|PMID:18261938) MGI PMID:12872135 PMID:18261938 MGI:2670551 MGI:3775161 NCBI chrNW_004936494:9,537,793...9,541,187 JBrowse link
G Nos3 nitric oxide synthase 3 ISO (MGI:3576391|PMID:15647265) MGI PMID:15647265 MGI:3576391 NCBI chrNW_004936527:6,427,147...6,445,770 JBrowse link
G Prkce protein kinase C epsilon ISO (MGI:3652658|PMID:16757566)
(MGI:3609210|PMID:11696589)
UniProt
MGI
PMID:11696589 PMID:16757566 MGI:3609210 MGI:3652658 NCBI chrNW_004936508:6,018,374...6,495,216 JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 ISO (PMID:23991106) UniProtKB PMID:23991106 NCBI chrNW_004936690:2,180,804...2,232,869 JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 ISO (MGI:2176422|PMID:11894098) MGI PMID:11894098 MGI:2176422 NCBI chrNW_004936544:3,606,925...3,653,248 JBrowse link
G Stat1 signal transducer and activator of transcription 1 ISO (MGI:2670551|PMID:12872135) MGI PMID:12872135 MGI:2670551 NCBI chrNW_004936506:7,196,860...7,235,854 JBrowse link
G Tgfb1 transforming growth factor beta 1 ISO (PMID:21147091) UniProtKB PMID:21147091 NCBI chrNW_004936661:3,742,080...3,758,266 JBrowse link
G Ticam1 toll like receptor adaptor molecule 1 ISO (MGI:2669022|PMID:12855817)
(MGI:2670551|PMID:12872135)
MGI PMID:12855817 PMID:12872135 MGI:2669022 MGI:2670551 NCBI chrNW_004936588:2,818,909...2,827,797 JBrowse link
G Tlr4 toll like receptor 4 NOT ISO (PMID:10880523)
(MGI:1860539|PMID:10880523), (MGI:5913054|PMID:28098138)
MGI PMID:10880523 PMID:28098138 MGI:1860539 MGI:5913054 NCBI chrNW_004936487:6,519,140...6,532,018 JBrowse link
G Tnf tumor necrosis factor ISO (PMID:21147091) UniProtKB PMID:21147091 NCBI chrNW_004936727:1,936,066...1,937,766 JBrowse link
male-specific defense response to bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmgb1 high mobility group box 1 ISO RGD PMID:16997939 RGD:2316780 NCBI chrNW_004936472:25,236,728...25,246,585 JBrowse link
negative regulation of antibacterial peptide production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spink5 serine peptidase inhibitor Kazal type 5 ISO (MGI:3770082|PMID:17012259) UniProt PMID:17012259 MGI:3770082 NCBI chrNW_004936504:6,653,703...6,750,110 JBrowse link
negative regulation of defense response to bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg2 arginase 2 ISO (MGI:5908771|PMID:27074721) UniProt PMID:27074721 MGI:5908771 NCBI chrNW_004936495:11,004,296...11,045,467 JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 ISO (MGI:5437532|PMID:22842346) UniProt PMID:22842346 MGI:5437532 NCBI chrNW_004936515:6,001,324...6,015,407 JBrowse link
G Mapkbp1 mitogen-activated protein kinase binding protein 1 ISO (PMID:22700971) UniProtKB PMID:22700971 NCBI chrNW_004936471:5,078,259...5,135,937 JBrowse link
G Sirt2 sirtuin 2 ISO (PMID:23908241)
(MGI:5502462|PMID:23908241)
UniProtKB
UniProt
PMID:23908241 MGI:5502462 NCBI chrNW_004936661:1,828,868...1,849,892 JBrowse link
negative regulation of lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cactin cactin, spliceosome C complex subunit ISO (PMID:20829348) UniProtKB PMID:20829348 NCBI chrNW_004936588:2,051,636...2,061,651 JBrowse link
G Defb114 defensin beta 114 ISO (PMID:23482568) UniProtKB PMID:23482568 NCBI chrNW_004936476:10,651,162...10,657,785 JBrowse link
G Ltf lactotransferrin ISO (PMID:20345905) UniProtKB PMID:20345905 NCBI chrNW_004936596:344,287...373,788 JBrowse link
G Nfkbil1 NFKB inhibitor like 1 ISO (PMID:20829348) UniProtKB PMID:20829348 NCBI chrNW_004936727:1,950,356...1,963,847 JBrowse link
G Prdm1 PR/SET domain 1 ISO (MGI:3826899|PMID:18845144) MGI PMID:18845144 MGI:3826899 NCBI chrNW_004936564:2,594,362...2,690,680 JBrowse link
G Prdx2 peroxiredoxin 2 ISO (MGI:3758374|PMID:17325201) MGI PMID:17325201 MGI:3758374 NCBI chrNW_004936659:1,894,423...1,897,690 JBrowse link
G Trib1 tribbles pseudokinase 1 ISO (PMID:17452330) BHF-UCL PMID:17452330 NCBI chrNW_004936470:22,401,713...22,408,808 JBrowse link
neutrophil-mediated killing of gram-negative bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G F2 coagulation factor II, thrombin ISO (PMID:20421939) UniProtKB PMID:20421939 NCBI chrNW_004936562:2,371,725...2,388,617 JBrowse link
G Tusc2 tumor suppressor 2, mitochondrial calcium regulator ISO (MGI:5518492|PMID:24042119) MGI PMID:24042119 MGI:5518492 NCBI chrNW_004936529:1,853,092...1,856,027 JBrowse link
neutrophil-mediated killing of gram-positive bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ncf1 neutrophil cytosolic factor 1 ISO (MGI:4353632|PMID:11907569) MGI PMID:11907569 MGI:4353632 NCBI chrNW_004936543:3,617,369...3,630,990 JBrowse link
positive regulation of antibacterial peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide binding oligomerization domain containing 2 ISO (MGI:3775881|PMID:18167348) MGI PMID:18167348 MGI:3775881 NCBI chrNW_004936475:3,708,069...3,742,845 JBrowse link
positive regulation of antibacterial peptide production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Klk5 kallikrein related peptidase 5 ISO (PMID:17012259) UniProtKB PMID:17012259 NCBI chrNW_004936889:609,807...616,777 JBrowse link
G Klk7 kallikrein related peptidase 7 ISO (PMID:17012259) UniProtKB PMID:17012259 NCBI chrNW_004936889:637,526...641,126 JBrowse link
G Pgc progastricsin ISO (PMID:12759353) UniProtKB PMID:12759353 NCBI chrNW_004936476:18,039,709...18,046,510 JBrowse link
positive regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide binding oligomerization domain containing 2 ISO (MGI:3528786|PMID:15692051) MGI PMID:15692051 MGI:3528786 NCBI chrNW_004936475:3,708,069...3,742,845 JBrowse link
positive regulation of defense response to bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grn granulin precursor ISO (MGI:4421471|PMID:20026663) UniProt PMID:20026663 MGI:4421471 NCBI chrNW_004936541:793,548...800,271 JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 ISO (MGI:4839671|PMID:20937702) UniProt PMID:20937702 MGI:4839671 NCBI chrNW_004936515:6,001,324...6,015,407 JBrowse link
G Lgals9 galectin 9 ISO (MGI:4839671|PMID:20937702) UniProt PMID:20937702 MGI:4839671 NCBI chrNW_004936538:4,034,467...4,050,240 JBrowse link
G LOC101967032 cytochrome b-245 light chain ISO (PMID:22423966) UniProtKB PMID:22423966 NCBI chrNW_004936641:1,036,967...1,044,954 JBrowse link
G LOC101974478 protein unc-13 homolog B ISO (MGI:5467668|PMID:23197834) ParkinsonsUK-UCL PMID:23197834 MGI:5467668 NCBI chrNW_004936524:3,320,859...3,369,865 JBrowse link
G Nlrp10 NLR family pyrin domain containing 10 ISO (PMID:28766990) UniProtKB PMID:28766990 NCBI chrNW_004936528:9,938,270...9,969,115 JBrowse link
G Rab34 RAB34, member RAS oncogene family ISO (MGI:5467668|PMID:23197834) ParkinsonsUK-UCL PMID:23197834 MGI:5467668 NCBI chrNW_004936538:4,923,740...4,928,798 JBrowse link
positive regulation of lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp6 bone morphogenetic protein 6 ISO (MGI:4352622|PMID:19252488) BHF-UCL PMID:19252488 MGI:4352622 NCBI chrNW_004936534:4,707,658...4,871,865 JBrowse link
G Cd180 CD180 molecule ISO (PMID:10880523)
(MGI:1860539|PMID:10880523)
MGI PMID:10880523 MGI:1860539 NCBI chrNW_004936480:2,105,179...2,119,137 JBrowse link
G Ly86 lymphocyte antigen 86 ISO (PMID:10880523)
(MGI:1860539|PMID:10880523)
MGI PMID:10880523 MGI:1860539 NCBI chrNW_004936534:5,848,110...5,908,082 JBrowse link
G Ly96 lymphocyte antigen 96 ISO (MGI:1860539|PMID:10880523) MGI PMID:10880523 MGI:1860539 NCBI chrNW_004936648:2,653,252...2,671,453 JBrowse link
G Mif macrophage migration inhibitory factor ISO (MGI:2156302|PMID:11756671) BHF-UCL PMID:11756671 MGI:2156302 NCBI chrNW_004936619:1,207,058...1,208,010 JBrowse link
G Prkca protein kinase C alpha ISO (PMID:9830023) UniProtKB PMID:9830023 NCBI chrNW_004936541:6,231,604...6,488,201 JBrowse link
G Sash1 SAM and SH3 domain containing 1 ISO (PMID:23776175) MGI PMID:23776175 NCBI chrNW_004936489:1,569,143...1,740,398 JBrowse link
G Scimp SLP adaptor and CSK interacting membrane protein ISO (MGI:5913054|PMID:28098138) UniProt PMID:28098138 MGI:5913054 NCBI chrNW_004936677:2,575,255...2,585,969 JBrowse link
G Traf6 TNF receptor associated factor 6 ISO (MGI:1335941|PMID:10215628) UniProt PMID:10215628 MGI:1335941 NCBI chrNW_004936533:1,857,685...1,874,973 JBrowse link
positive regulation of neutrophil mediated killing of gram-negative bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G F2rl1 F2R like trypsin receptor 1 ISO (PMID:21501162) UniProtKB PMID:21501162 NCBI chrNW_004936549:142,281...153,575 JBrowse link
regulation of defense response to bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp1 forkhead box P1 ISO (PMID:18799727) UniProtKB PMID:18799727 NCBI chrNW_004936603:2,631,781...3,146,104 JBrowse link
G Syt11 synaptotagmin 11 ISO (MGI:5468041|PMID:23303671) ParkinsonsUK-UCL PMID:23303671 MGI:5468041 NCBI chrNW_004936580:5,123,196...5,142,976 JBrowse link
regulation of lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd55 CD55 molecule (Cromer blood group) ISO (PMID:12731067) UniProtKB PMID:12731067 NCBI chrNW_004936557:5,344,373...5,364,234 JBrowse link
G Cd84 CD84 molecule ISO (MGI:5700297|PMID:20628063) UniProt PMID:20628063 MGI:5700297 NCBI chrNW_004936740:111,296...133,847 JBrowse link
G Cx3cl1 C-X3-C motif chemokine ligand 1 ISO (PMID:10652441) ARUK-UCL PMID:10652441 NCBI chrNW_004936475:9,443,851...9,454,715 JBrowse link
G Tut4 terminal uridylyl transferase 4 ISO (MGI:3624478|PMID:16643855) MGI PMID:16643855 MGI:3624478 NCBI chrNW_004936522:8,468,092...8,560,453 JBrowse link
response to bacterial lipoprotein term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tlr1 toll like receptor 1 ISO Pam3CSK4 - a synthetic tripalmitoylated lipopeptide that mimicks the acylated amino terminus of bacterial LPs RGD PMID:16973131 RGD:1643119 NCBI chrNW_004936482:6,582,430...6,591,128 JBrowse link
G Tlr2 toll like receptor 2 ISO Pam3CSK4 - a synthetic tripalmitoylated lipopeptide that mimicks the acylated amino terminus of bacterial LPs RGD PMID:16973131 RGD:1643119 NCBI chrNW_004936576:522,234...531,660 JBrowse link
G Tlr6 toll like receptor 6 ISO FSL1 - a diacylated synthetic lipoprotein RGD PMID:16973131 RGD:1643119 NCBI chrNW_004936482:6,607,723...6,610,161 JBrowse link
response to Gram-negative bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irak3 interleukin 1 receptor associated kinase 3 ISO RGD PMID:27832756 RGD:34888235 NCBI chrNW_004936545:4,233,353...4,284,324 JBrowse link
G Tnf tumor necrosis factor ISO RGD PMID:9466473 RGD:38508904 NCBI chrNW_004936727:1,936,066...1,937,766 JBrowse link
response to Gram-positive bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irak3 interleukin 1 receptor associated kinase 3 ISO RGD PMID:27832756 RGD:34888235 NCBI chrNW_004936545:4,233,353...4,284,324 JBrowse link
response to lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1 ATP binding cassette subfamily B member 1 ISO RGD PMID:28842383 RGD:13446404 NCBI chrNW_004936763:1,225,355...1,308,257 JBrowse link
G Abcc2 ATP binding cassette subfamily C member 2 ISO RGD PMID:28842383 RGD:13446404 NCBI chrNW_004936636:292,631...341,999 JBrowse link
G Abcc3 ATP binding cassette subfamily C member 3 ISO RGD PMID:18505788 RGD:2301058 NCBI chrNW_004936490:11,039,968...11,086,670 JBrowse link
G Abcc5 ATP binding cassette subfamily C member 5 ISO RGD PMID:15134348 RGD:2301082 NCBI chrNW_004936578:5,838,044...5,916,287 JBrowse link
G Abcc8 ATP binding cassette subfamily C member 8 ISO RGD PMID:17285300 RGD:2301914 NCBI chrNW_004936528:1,608,782...1,682,873 JBrowse link
G Acod1 aconitate decarboxylase 1 ISO (MGI:72790|PMID:7721348) MGI PMID:7721348 MGI:72790 NCBI chrNW_004936511:4,322,198...4,326,562 JBrowse link
G Acp5 acid phosphatase 5, tartrate resistant ISO (MGI:1930064|PMID:11168643) MGI PMID:11168643 MGI:1930064 NCBI chrNW_004936659:1,598,252...1,642,615 JBrowse link
G Adam17 ADAM metallopeptidase domain 17 ISO (PMID:18383040) BHF-UCL PMID:18383040 NCBI chrNW_004936532:5,864,851...5,904,005 JBrowse link
G Adipor2 adiponectin receptor 2 ISO RGD PMID:23838384 RGD:8695926 NCBI chrNW_004936606:1,911,104...2,007,109 JBrowse link
G Adm adrenomedullin ISO RGD PMID:16378176 RGD:1625325 NCBI chrNW_004936528:8,005,223...8,007,586 JBrowse link
G Akap12 A-kinase anchoring protein 12 ISO RGD PMID:23912647 RGD:14348970 NCBI chrNW_004936489:4,237,466...4,258,408 JBrowse link
G Akirin2 akirin 2 ISO (MGI:3771766|PMID:18066067) MGI PMID:18066067 MGI:3771766 NCBI chrNW_004936510:4,216,893...4,221,962 JBrowse link
G Alad aminolevulinate dehydratase ISO plus D-galactosamine RGD PMID:19344711 RGD:4144148 NCBI chrNW_004936559:226,481...237,258 JBrowse link
G Aldh2 aldehyde dehydrogenase 2 family member ISO RGD PMID:11578593 RGD:1599044 NCBI chrNW_004936558:4,362,693...4,387,705 JBrowse link
G Alpl alkaline phosphatase, biomineralization associated ISO RGD PMID:11810315 RGD:2315621 NCBI chrNW_004936474:7,209,196...7,229,899 JBrowse link
G Apob apolipoprotein B ISO RGD PMID:16719989 RGD:1599165 NCBI chrNW_004936493:10,509,118...10,549,144 JBrowse link
G Aqp2 aquaporin 2 ISO RGD PMID:18824919 RGD:2313129 NCBI chrNW_004936512:7,628,677...7,633,344 JBrowse link
G Asl argininosuccinate lyase ISO RGD PMID:8576237 PMID:10652239 RGD:1599265 RGD:4140434 NCBI chrNW_004936543:7,688,788...7,699,842 JBrowse link
G Ass1 argininosuccinate synthase 1 ISO RGD PMID:12589771 RGD:1599307 NCBI chrNW_004936487:17,482,307...17,527,407 JBrowse link
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 ISO RGD PMID:25712896 RGD:13507309 NCBI chrNW_004936558:3,300,941...3,357,595 JBrowse link
G Atp4b ATPase H+/K+ transporting subunit beta ISO RGD PMID:15024311 RGD:2301243 NCBI&nbs