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ONTOLOGY REPORT - ANNOTATIONS


Term:entrainment of circadian clock
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Accession:GO:0009649 term browser browse the term
Definition:The synchronization of a circadian rhythm to environmental time cues such as light.
Synonyms:related_synonym: regulation of circadian rhythm phase


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entrainment of circadian clock term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atoh7 atonal bHLH transcription factor 7 JBrowse link 20 27,082,961 27,083,410 RGD:1624291
G Chrm1 cholinergic receptor, muscarinic 1 JBrowse link 1 224,869,087 224,885,101 RGD:1624291
G Clock clock circadian regulator JBrowse link 14 34,418,226 34,502,218 RGD:632379
G Id2 inhibitor of DNA binding 2 JBrowse link 6 44,360,077 44,361,908 RGD:1624291
G Phlpp1 PH domain and leucine rich repeat protein phosphatase 1 JBrowse link 13 26,145,989 26,394,505 RGD:1624291
RGD:1600115
G Sox14 SRY-box transcription factor 14 JBrowse link 8 108,107,865 108,109,801 RGD:1624291
entrainment of circadian clock by photoperiod term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aanat aralkylamine N-acetyltransferase JBrowse link 10 105,568,091 105,572,407 RGD:1298540
G Atoh7 atonal bHLH transcription factor 7 JBrowse link 20 27,082,961 27,083,410 RGD:1624291
G Bhlhe40 basic helix-loop-helix family, member e40 JBrowse link 4 140,703,619 140,709,319 RGD:1624291
RGD:1600115
G Crtc1 CREB regulated transcription coactivator 1 JBrowse link 16 20,740,746 20,798,145 RGD:1624291
RGD:1600115
G Cry1 cryptochrome circadian regulator 1 JBrowse link 7 24,534,593 24,634,098 RGD:1624291
RGD:1600115
G Cry2 cryptochrome circadian regulator 2 JBrowse link 3 81,314,151 81,344,143 RGD:1600115
RGD:1624291
G Fbxl12 F-box and leucine-rich repeat protein 12 JBrowse link 8 21,656,636 21,662,755 RGD:13792537
G Fbxl21 F-box and leucine-rich repeat protein 21 JBrowse link 17 8,505,771 8,520,208 RGD:1624291
RGD:13792537
G Fbxl22 F-box and leucine-rich repeat protein 22 JBrowse link 8 72,198,043 72,204,730 RGD:13792537
G Fbxl3 F-box and leucine-rich repeat protein 3 JBrowse link 15 93,647,307 93,667,395 RGD:1624291
RGD:13792537
G Fbxl6 F-box and leucine-rich repeat protein 6 JBrowse link 7 117,602,056 117,604,954 RGD:13792537
G Fbxl8 F-box and leucine-rich repeat protein 8 JBrowse link 19 37,216,696 37,225,701 RGD:13792537
G Id2 inhibitor of DNA binding 2 JBrowse link 6 44,360,077 44,361,908 RGD:1624291
RGD:1600115
G Mta1 metastasis associated 1 JBrowse link 6 137,911,302 137,950,066 RGD:1624291
RGD:1600115
G Nr2f6 nuclear receptor subfamily 2, group F, member 6 JBrowse link 16 19,769,968 19,777,414 RGD:1624291
RGD:1600115
G Opn4 opsin 4 JBrowse link 16 10,943,353 10,966,602 RGD:1624291
G Opn5 opsin 5 JBrowse link 9 21,045,457 21,092,517 RGD:1624291
G Pde6b phosphodiesterase 6B JBrowse link 14 2,328,690 2,371,913 RGD:1624291
G Per1 period circadian regulator 1 JBrowse link 10 55,681,761 55,696,557 RGD:1600115
RGD:13792537
RGD:1624291
G Per2 period circadian regulator 2 JBrowse link 9 98,555,154 98,597,362 RGD:13792537
G Per3 period circadian regulator 3 JBrowse link 5 168,088,126 168,123,482 RGD:13792537
G Pml PML nuclear body scaffold JBrowse link 8 63,002,515 63,034,310 RGD:1624291
G Ppp1ca protein phosphatase 1 catalytic subunit alpha JBrowse link 1 219,439,953 219,443,570 RGD:1624291
RGD:1600115
G Ppp1cb protein phosphatase 1 catalytic subunit beta JBrowse link 6 23,548,507 23,581,136 RGD:1624291
RGD:1600115
G Ppp1cc protein phosphatase 1 catalytic subunit gamma JBrowse link 12 39,864,302 39,882,030 RGD:1600115
G Rbm4 RNA binding motif protein 4 JBrowse link 1 220,038,403 220,049,756 RGD:1624291
G Rbm4b RNA binding motif protein 4B JBrowse link 1 220,009,397 220,019,488 RGD:1624291
RGD:1600115
G Sik1 salt-inducible kinase 1 JBrowse link 20 10,670,747 10,680,279 RGD:1624291
RGD:1600115
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:1624291
RGD:1600115
G Usp2 ubiquitin specific peptidase 2 JBrowse link 8 48,403,985 48,432,525 RGD:1624291
RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19678
    regulation of biological process 12920
      regulation of circadian rhythm 134
        entrainment of circadian clock 34
          entrainment of circadian clock by photoperiod 30
Path 2
Term Annotations click to browse term
  biological_process 19678
    rhythmic process 390
      circadian rhythm 263
        regulation of circadian rhythm 134
          entrainment of circadian clock 34
            entrainment of circadian clock by photoperiod 30
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.