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ONTOLOGY REPORT - ANNOTATIONS


Term:alkaloid metabolic process
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Accession:GO:0009820 term browser browse the term
Definition:The chemical reactions and pathways involving alkaloids, nitrogen containing natural products which are not otherwise classified as peptides, nonprotein amino acids, amines, cyanogenic glycosides, glucosinolates, cofactors, phytohormones or primary metabolites (such as purine or pyrimidine bases).
Synonyms:exact_synonym: alkaloid metabolism


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alkaloid metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 JBrowse link 8 62,451,360 62,458,244 RGD:1624291
RGD:1600115
G Cyp2d4 cytochrome P450, family 2, subfamily d, polypeptide 4 JBrowse link 7 123,599,264 123,608,436 RGD:1624291
alkaloid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cyp2d4 cytochrome P450, family 2, subfamily d, polypeptide 4 JBrowse link 7 123,599,264 123,608,436 RGD:1624291
G Cyp3a9 cytochrome P450, family 3, subfamily a, polypeptide 9 JBrowse link 12 19,074,288 19,114,491 RGD:1624291
isoquinoline alkaloid metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cyp2d4 cytochrome P450, family 2, subfamily d, polypeptide 4 JBrowse link 7 123,599,264 123,608,436 RGD:1624291
G Ddc dopa decarboxylase JBrowse link 14 91,905,919 91,996,816 RGD:5129087
G Th tyrosine hydroxylase JBrowse link 1 216,073,034 216,080,287 RGD:5129087

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  biological_process 19317
    metabolic process 11540
      organic substance metabolic process 10932
        organonitrogen compound metabolic process 6848
          alkaloid metabolic process 5
            alkaloid biosynthetic process + 0
            alkaloid catabolic process + 2
            indole alkaloid metabolic process + 0
            isoquinoline alkaloid metabolic process + 3
            nicotinamide metabolic process + 0
            nicotinate metabolic process + 0
            purine alkaloid metabolic process + 0
            pyrrolizidine alkaloid metabolic process + 0
            stachydrine metabolic process + 0
            terrequinone A metabolic process + 0
            tropane alkaloid metabolic process + 0
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.