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ONTOLOGY REPORT - ANNOTATIONS


Term:negative regulation of catabolic process
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Accession:GO:0009895 term browser browse the term
Definition:Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of substances.
Synonyms:exact_synonym: down regulation of catabolic process;   downregulation of catabolic process;   negative regulation of breakdown;   negative regulation of catabolism;   negative regulation of degradation
 narrow_synonym: inhibition of catabolic process


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negative regulation of catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zdhhc7 zinc finger DHHC-type palmitoyltransferase 7 ISO (PMID:25301068) UniProt PMID:25301068 NCBI chrNW_004955541:398,364...426,330
Ensembl chrNW_004955541:397,748...432,501
JBrowse link
3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angel2 angel homolog 2 ISO (PMID:22547059) HGNC PMID:22547059 NCBI chrNW_004955406:4,589,849...4,606,380
Ensembl chrNW_004955406:4,589,849...4,606,380
JBrowse link
G Elavl1 ELAV like RNA binding protein 1 ISO (MGI:MGI:6105829|PMID:27616329)
(PMID:14517288), (PMID:26489465), (PMID:29180010)
(PMID:19029303)
UniProt
UniProtKB
PMID:14517288, PMID:19029303, PMID:26489465, PMID:27616329, PMID:29180010 MGI:MGI:6105829 NCBI chrNW_004955563:1,283,424...1,315,283
Ensembl chrNW_004955563:1,283,421...1,315,283
JBrowse link
G Elavl4 ELAV like RNA binding protein 4 ISO (PMID:12034726) UniProt PMID:12034726 NCBI chrNW_004955464:8,699,142...8,847,289
Ensembl chrNW_004955464:8,699,088...8,788,878
JBrowse link
G Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 ISO (MGI:MGI:5306322|PMID:12456657) UniProtKB PMID:12456657 MGI:MGI:5306322 NCBI chrNW_004955408:32,718,736...32,719,409 JBrowse link
G Hnrnpc heterogeneous nuclear ribonucleoprotein C ISO (PMID:16010978) UniProtKB PMID:16010978 NCBI chrNW_004955550:1,949,975...2,002,297 JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 ISO (PMID:14517288), (PMID:15014438), (PMID:20932473) UniProtKB PMID:14517288, PMID:15014438, PMID:20932473 NCBI chrNW_004955406:42,231,858...42,276,477
Ensembl chrNW_004955406:42,231,858...42,276,477
JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor ISO (PMID:15294994) BHF-UCL PMID:15294994 NCBI chrNW_004955427:25,553,589...25,557,654
Ensembl chrNW_004955427:25,553,589...25,559,138
JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 ISO RGD PMID:11696543 RGD:10045987 NCBI chrNW_004955495:6,990,565...7,002,492
Ensembl chrNW_004955495:6,987,182...7,002,492
JBrowse link
G Rbm10 RNA binding motif protein 10 ISO (MGI:MGI:4367529|PMID:19508861) MGI PMID:19508861 MGI:MGI:4367529 NCBI chrNW_004955516:904,852...934,313
Ensembl chrNW_004955516:904,062...934,313
JBrowse link
G Rbm38 RNA binding motif protein 38 ISO (PMID:17050675) UniProtKB PMID:17050675 NCBI chrNW_004955445:2,036,314...2,050,882
Ensembl chrNW_004955445:2,036,124...2,052,139
JBrowse link
G Tardbp TAR DNA binding protein ISO (PMID:17481916) BHF-UCL PMID:17481916 NCBI chrNW_004955486:2,656,121...2,674,808
Ensembl chrNW_004955486:2,656,121...2,674,807
JBrowse link
G Tirap TIR domain containing adaptor protein ISO (PMID:15294994) BHF-UCL PMID:15294994 NCBI chrNW_004955412:27,303,548...27,315,031
Ensembl chrNW_004955412:27,312,489...27,315,031
JBrowse link
G Zfp36 ZFP36 ring finger protein ISO (PMID:15014438) UniProtKB PMID:15014438 NCBI chrNW_004955468:152,744...155,140
Ensembl chrNW_004955468:152,744...155,140
JBrowse link
CRD-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx9 DExH-box helicase 9 ISO (PMID:19029303) UniProtKB PMID:19029303 NCBI chrNW_004955406:21,697,813...21,743,551
Ensembl chrNW_004955406:21,697,813...21,745,011
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U ISO (PMID:19029303) UniProtKB PMID:19029303 NCBI chrNW_004955406:8,000,269...8,021,554
Ensembl chrNW_004955406:8,000,269...8,021,554
JBrowse link
G Igf2bp1 insulin like growth factor 2 mRNA binding protein 1 ISO (PMID:19029303) UniProtKB PMID:19029303 NCBI chrNW_004955451:12,312,715...12,348,663
Ensembl chrNW_004955451:12,312,715...12,348,663
JBrowse link
G Syncrip synaptotagmin binding cytoplasmic RNA interacting protein ISO (PMID:19029303) UniProtKB PMID:19029303 NCBI chrNW_004955411:13,068,078...13,096,936
Ensembl chrNW_004955411:13,066,789...13,096,938
JBrowse link
G Ybx1 Y-box binding protein 1 ISO (PMID:19029303) UniProtKB PMID:19029303 NCBI chrNW_004955537:2,234,052...2,254,528
Ensembl chrNW_004955537:2,234,054...2,251,708
JBrowse link
mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 ISO (MGI:MGI:3057047|PMID:15480992) MGI PMID:15480992 MGI:MGI:3057047 NCBI chrNW_004955413:6,471,933...6,480,475
Ensembl chrNW_004955413:6,471,953...6,480,469
JBrowse link
G Axin2 axin 2 ISO (PMID:17072303) BHF-UCL PMID:17072303 NCBI chrNW_004955478:4,952,551...4,982,223
Ensembl chrNW_004955478:4,952,488...4,982,225
JBrowse link
G Cirbp cold inducible RNA binding protein ISO (PMID:11574538) UniProtKB PMID:11574538 NCBI chrNW_004955495:6,634,389...6,640,800
Ensembl chrNW_004955495:6,634,394...6,640,800
JBrowse link
G Dicer1 dicer 1, ribonuclease III ISO (MGI:MGI:5439239|PMID:22844247) MGI PMID:22844247 MGI:MGI:5439239 NCBI chrNW_004955438:17,374,899...17,431,599
Ensembl chrNW_004955438:17,382,493...17,431,797
JBrowse link
G E2f1 E2F transcription factor 1 ISO (PMID:15766563) BHF-UCL PMID:15766563 NCBI chrNW_004955422:27,638,625...27,643,261
Ensembl chrNW_004955422:27,633,827...27,642,241
JBrowse link
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 ISO (PMID:24335285), (PMID:32354837) UniProt PMID:24335285, PMID:32354837 NCBI chrNW_004955455:5,612,087...5,660,543
Ensembl chrNW_004955455:5,611,093...5,660,104
JBrowse link
G Elavl1 ELAV like RNA binding protein 1 ISO (PMID:19029303)
(PMID:21613615), (PMID:31358969)
(MGI:MGI:3037407|PMID:14976220), (MGI:MGI:5287957|PMID:21613615), (MGI:MGI:5559905|PMID:24394384)
(MGI:MGI:5922838|PMID:27609837)
UniProtKB
MGI
CACAO
PMID:14976220, PMID:19029303, PMID:21613615, PMID:24394384, PMID:27609837, PMID:31358969 MGI:MGI:3037407, MGI:MGI:5287957, MGI:MGI:5559905, MGI:MGI:5922838 NCBI chrNW_004955563:1,283,424...1,315,283
Ensembl chrNW_004955563:1,283,421...1,315,283
JBrowse link
G Gdnf glial cell derived neurotrophic factor ISO (PMID:12358785) BHF-UCL PMID:12358785 NCBI chrNW_004955426:22,386,613...22,412,324
Ensembl chrNW_004955426:22,386,450...22,412,324
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D ISO RGD PMID:15192077 RGD:1357938 NCBI chrNW_004955433:6,452,931...6,470,209
Ensembl chrNW_004955433:6,454,454...6,469,904
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U ISO (PMID:17174306) UniProtKB PMID:17174306 NCBI chrNW_004955406:8,000,269...8,021,554
Ensembl chrNW_004955406:8,000,269...8,021,554
JBrowse link
G Larp1 La ribonucleoprotein 1, translational regulator ISO (PMID:25940091), (PMID:28673543) UniProt PMID:25940091, PMID:28673543 NCBI chrNW_004955408:9,002,443...9,080,938
Ensembl chrNW_004955408:9,002,458...9,080,938
JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 ISO (MGI:MGI:2158083|PMID:11741878) MGI PMID:11741878 MGI:MGI:2158083 NCBI chrNW_004955406:42,231,858...42,276,477
Ensembl chrNW_004955406:42,231,858...42,276,477
JBrowse link
G Meioc meiosis specific with coiled-coil domain ISO (MGI:MGI:5770021|PMID:26742488) UniProtKB PMID:26742488 MGI:MGI:5770021 NCBI chrNW_004955451:17,534,644...17,547,095
Ensembl chrNW_004955451:17,534,659...17,545,584
JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO RGD PMID:21073857 RGD:10040969 NCBI chrNW_004955486:2,487,642...2,599,694
Ensembl chrNW_004955486:2,487,642...2,599,694
JBrowse link
G Noct nocturnin ISO (MGI:MGI:5308514|PMID:22073225) UniProtKB PMID:22073225 MGI:MGI:5308514 NCBI chrNW_004955428:4,559,027...4,580,013 JBrowse link
G Qki QKI, KH domain containing RNA binding ISO RGD PMID:16855020 RGD:10045995 NCBI chrNW_004955439:17,925,205...18,079,727 JBrowse link
G Rbm24 RNA binding motif protein 24 ISO (PMID:29104163) UniProtKB PMID:29104163 NCBI chrNW_004955483:8,705,533...8,716,772
Ensembl chrNW_004955483:8,705,213...8,716,778
JBrowse link
G Rbm46 RNA binding motif protein 46 ISO (MGI:MGI:5644240|PMID:25397698) MGI PMID:25397698 MGI:MGI:5644240 NCBI chrNW_004955471:12,096,400...12,167,536 JBrowse link
G Slc11a1 solute carrier family 11 member 1 ISO (MGI:MGI:85148|PMID:9009318) MGI PMID:9009318 MGI:MGI:85148 NCBI chrNW_004955453:14,980,562...14,995,118
Ensembl chrNW_004955453:14,980,562...14,995,608
JBrowse link
G Taf15 TATA-box binding protein associated factor 15 ISO (PMID:27378374) MGI PMID:27378374 NCBI chrNW_004955481:10,242,839...10,274,961
Ensembl chrNW_004955481:10,252,393...10,274,860
JBrowse link
G Tent5c terminal nucleotidyltransferase 5C ISO (PMID:28931820)
(MGI:MGI:5926094|PMID:28931820)
UniProtKB PMID:28931820 MGI:MGI:5926094 NCBI chrNW_004955435:20,790,410...20,811,730
Ensembl chrNW_004955435:20,792,773...20,811,723
JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 ISO (PMID:18794151) UniProtKB PMID:18794151 NCBI chrNW_004955452:14,233,155...14,282,521
Ensembl chrNW_004955452:14,233,155...14,283,886
JBrowse link
G Vegfa vascular endothelial growth factor A ISO RGD PMID:12881220 RGD:1580563 NCBI chrNW_004955437:9,527,445...9,541,908 JBrowse link
G Ybx1 Y-box binding protein 1 ISO (PMID:31358969) UniProt PMID:31358969 NCBI chrNW_004955537:2,234,052...2,254,528
Ensembl chrNW_004955537:2,234,054...2,251,708
JBrowse link
G Ybx2 Y-box binding protein 2 ISO (MGI:MGI:3696301|PMID:17035640) MGI PMID:17035640 MGI:MGI:3696301 NCBI chrNW_004955467:9,624,506...9,629,904
Ensembl chrNW_004955467:9,624,019...9,629,904
JBrowse link
negative regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mettl16 methyltransferase like 16 ISO (PMID:28525753) UniProt PMID:28525753 NCBI chrNW_004955481:762,030...836,299
Ensembl chrNW_004955481:762,024...836,067
JBrowse link
negative regulation of apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dffa DNA fragmentation factor subunit alpha ISO (PMID:15572351)
(MGI:MGI:2182584|PMID:10601318), (MGI:MGI:3029597|PMID:14663139)
MGI PMID:10601318, PMID:14663139, PMID:15572351 MGI:MGI:2182584, MGI:MGI:3029597 NCBI chrNW_004955486:3,273,712...3,274,510 JBrowse link
G Nmnat1 nicotinamide nucleotide adenylyltransferase 1 ISO RGD PMID:27184051 RGD:13781945 NCBI chrNW_004955486:3,637,794...3,655,744
Ensembl chrNW_004955486:3,637,794...3,655,598
JBrowse link
G Pam16 presequence translocase associated motor 16 ISO RGD PMID:24069394 RGD:13462066 NCBI chrNW_004955442:13,087,082...13,097,048
Ensembl chrNW_004955442:13,087,092...13,097,048
JBrowse link
negative regulation of arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 ISO (PMID:19278978) BHF-UCL PMID:19278978 NCBI chrNW_004955406:39,552,034...39,645,694
Ensembl chrNW_004955406:39,552,019...39,645,694
JBrowse link
negative regulation of autophagosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Becn1 beclin 1 ISO (MGI:MGI:5888970|PMID:27994061) MGI PMID:27994061 MGI:MGI:5888970 NCBI chrNW_004955451:16,616,595...16,625,731 JBrowse link
G Chmp4b charged multivesicular body protein 4B ISO (PMID:21975012) UniProtKB PMID:21975012 NCBI chrNW_004955422:27,482,239...27,526,798
Ensembl chrNW_004955422:27,478,698...27,526,575
JBrowse link
G Ehmt2 euchromatic histone lysine methyltransferase 2 ISO (MGI:MGI:5543871|PMID:23918802) MGI PMID:23918802 MGI:MGI:5543871 NCBI chrNW_004955437:396,736...411,144
Ensembl chrNW_004955437:396,742...411,144
JBrowse link
G Fez1 fasciculation and elongation protein zeta 1 ISO (PMID:25495476) GO_Central PMID:25495476 NCBI chrNW_004955412:26,477,995...26,530,686
Ensembl chrNW_004955412:26,477,301...26,531,354
JBrowse link
G Fez2 fasciculation and elongation protein zeta 2 ISO (PMID:25495476) GO_Central PMID:25495476 NCBI chrNW_004955441:4,421,936...4,456,070 JBrowse link
G Lrrk2 leucine rich repeat kinase 2 ISO (PMID:23916833) ParkinsonsUK-UCL PMID:23916833 NCBI chrNW_004955505:84,324...216,923
Ensembl chrNW_004955505:81,796...216,923
JBrowse link
G Mtm1 myotubularin 1 ISO (MGI:MGI:5510937|PMID:23695157) MGI PMID:23695157 MGI:MGI:5510937 NCBI chrNW_004955498:6,329,402...6,444,708
Ensembl chrNW_004955498:6,329,275...6,445,169
JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator ISO (PMID:20181828) UniProt PMID:20181828 NCBI chrNW_004955493:6,746,380...6,747,763
Ensembl chrNW_004955493:6,746,380...6,747,763
JBrowse link
G Phf23 PHD finger protein 23 ISO (PMID:25484098) GO_Central PMID:25484098 NCBI chrNW_004955467:9,671,133...9,675,434
Ensembl chrNW_004955467:9,671,133...9,675,434
JBrowse link
G Pink1 PTEN induced kinase 1 ISO (PMID:19279012) ParkinsonsUK-UCL PMID:19279012 NCBI chrNW_004955452:1,171,115...1,186,338
Ensembl chrNW_004955452:1,171,205...1,185,125
JBrowse link
G Scfd1 sec1 family domain containing 1 ISO (PMID:21242315) UniProtKB PMID:21242315 NCBI chrNW_004955409:29,805,909...29,903,208
Ensembl chrNW_004955409:29,805,909...29,903,208
JBrowse link
G Sec22b SEC22 homolog B, vesicle trafficking protein ISO (PMID:21242315) UniProtKB PMID:21242315 NCBI chrNW_004955568:1,559,519...1,587,782
Ensembl chrNW_004955568:1,559,452...1,587,782
JBrowse link
G Smcr8 SMCR8-C9orf72 complex subunit ISO (PMID:28195531) HGNC PMID:28195531 NCBI chrNW_004955478:11,002,174...11,015,123
Ensembl chrNW_004955478:11,002,174...11,015,123
JBrowse link
G Tmem39a transmembrane protein 39A ISO (PMID:31806350) UniProt PMID:31806350 NCBI chrNW_004955427:19,118,631...19,184,315
Ensembl chrNW_004955427:19,133,434...19,184,344
JBrowse link
negative regulation of autophagosome maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec16a C-type lectin domain containing 16A ISO (PMID:28223137) UniProtKB PMID:28223137 NCBI chrNW_004955442:7,369,616...7,584,052
Ensembl chrNW_004955442:7,368,952...7,584,703
JBrowse link
G Phf23 PHD finger protein 23 ISO (PMID:25484098) GO_Central PMID:25484098 NCBI chrNW_004955467:9,671,133...9,675,434
Ensembl chrNW_004955467:9,671,133...9,675,434
JBrowse link
G Rubcn rubicon autophagy regulator ISO (PMID:21062745) UniProtKB PMID:21062745 NCBI chrNW_004955420:12,124,193...12,187,154
Ensembl chrNW_004955420:12,123,450...12,187,154
JBrowse link
G Tmem39a transmembrane protein 39A ISO (PMID:31806350) UniProt PMID:31806350 NCBI chrNW_004955427:19,118,631...19,184,315
Ensembl chrNW_004955427:19,133,434...19,184,344
JBrowse link
G Ubqln4 ubiquilin 4 ISO (PMID:23459205) UniProtKB PMID:23459205 NCBI chrNW_004955545:2,218,794...2,236,665
Ensembl chrNW_004955545:2,220,548...2,236,646
JBrowse link
negative regulation of autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1a adrenoceptor alpha 1A ISO (MGI:MGI:5888970|PMID:27994061) MGI PMID:27994061 MGI:MGI:5888970 NCBI chrNW_004955403:49,394,173...49,485,881
Ensembl chrNW_004955403:49,399,127...49,485,934
JBrowse link
G Akt1 AKT serine/threonine kinase 1 ISO (PMID:18387192) BHF-UCL PMID:18387192 NCBI chrNW_004955538:3,208,711...3,224,386
Ensembl chrNW_004955538:3,208,710...3,229,904
JBrowse link
G Bcl2 BCL2 apoptosis regulator ISO (MGI:MGI:3796473|PMID:18281291) ParkinsonsUK-UCL PMID:18281291 MGI:MGI:3796473 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485
JBrowse link
G Becn1 beclin 1 ISO (MGI:MGI:5888970|PMID:27994061) MGI PMID:27994061 MGI:MGI:5888970 NCBI chrNW_004955451:16,616,595...16,625,731 JBrowse link
G Bmf Bcl2 modifying factor ISO (PMID:23629966)
(MGI:MGI:5490676|PMID:23629966)
CAFA PMID:23629966 MGI:MGI:5490676 NCBI chrNW_004955416:7,048,654...7,068,917
Ensembl chrNW_004955416:7,052,290...7,068,910
JBrowse link
G Cptp ceramide-1-phosphate transfer protein ISO (PMID:29164996) UniProtKB PMID:29164996 NCBI chrNW_004955486:9,475,520...9,478,925
Ensembl chrNW_004955486:9,475,520...9,478,925
JBrowse link
G Dap death associated protein ISO (PMID:20537536) UniProtKB PMID:20537536 NCBI chrNW_004955426:398,593...452,004 JBrowse link
G Eif4e eukaryotic translation initiation factor 4E NOT ISO (PMID:18426977) ParkinsonsUK-UCL PMID:18426977 NCBI chrNW_004955405:9,122,960...9,159,095
Ensembl chrNW_004955405:9,122,228...9,159,711
JBrowse link
G Eif4g1 eukaryotic translation initiation factor 4 gamma 1 ISO (PMID:18426977) ParkinsonsUK-UCL PMID:18426977 NCBI chrNW_004955420:23,161,541...23,179,788
Ensembl chrNW_004955420:23,161,078...23,180,568
JBrowse link
G Eif4g2 eukaryotic translation initiation factor 4 gamma 2 ISO (PMID:18426977) ParkinsonsUK-UCL PMID:18426977 NCBI chrNW_004955414:26,389,125...26,399,916
Ensembl chrNW_004955414:26,389,125...26,399,916
JBrowse link
G Eif4g3 eukaryotic translation initiation factor 4 gamma 3 NOT ISO (PMID:18426977) ParkinsonsUK-UCL PMID:18426977 NCBI chrNW_004955452:1,328,103...1,625,341
Ensembl chrNW_004955452:1,328,345...1,625,934
JBrowse link
G Foxk1 forkhead box K1 ISO (PMID:25402684) UniProt PMID:25402684 NCBI chrNW_004955460:11,011,498...11,067,443
Ensembl chrNW_004955460:11,018,177...11,067,443
JBrowse link
G Foxk2 forkhead box K2 ISO (MGI:MGI:5615527|PMID:25402684) UniProt PMID:25402684 MGI:MGI:5615527 NCBI chrNW_004955506:567,770...614,505
Ensembl chrNW_004955506:569,143...614,503
JBrowse link
G Gata4 GATA binding protein 4 ISO RGD PMID:19901028 RGD:5131537 NCBI chrNW_004955403:52,958,318...53,029,267
Ensembl chrNW_004955403:52,987,644...53,029,267
JBrowse link
G Golga2 golgin A2 ISO (PMID:22735382) ParkinsonsUK-UCL PMID:22735382 NCBI chrNW_004955570:782,218...799,044 JBrowse link
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 ISO (MGI:MGI:4461108|PMID:20041218) MGI PMID:20041218 MGI:MGI:4461108 NCBI chrNW_004955450:11,525,245...11,719,992
Ensembl chrNW_004955450:11,525,246...11,719,992
JBrowse link
G Htr2b 5-hydroxytryptamine receptor 2B ISO (PMID:20099302) UniProtKB PMID:20099302 NCBI chrNW_004955453:4,352,278...4,367,807
Ensembl chrNW_004955453:4,351,668...4,367,807
JBrowse link
G Il10 interleukin 10 ISO (PMID:26962683) UniProt PMID:26962683 NCBI chrNW_004955406:42,307,789...42,312,255
Ensembl chrNW_004955406:42,307,664...42,312,779
JBrowse link
G Il10ra interleukin 10 receptor subunit alpha ISO (PMID:26962683) UniProt PMID:26962683 NCBI chrNW_004955412:19,182,536...19,197,083
Ensembl chrNW_004955412:19,182,029...19,193,971
JBrowse link
G Kdm4a lysine demethylase 4A ISO (PMID:25660547) ParkinsonsUK-UCL PMID:25660547 NCBI chrNW_004955537:3,199,394...3,255,945 JBrowse link
G Kif25 kinesin family member 25 ISO (PMID:22354037) BHF-UCL PMID:22354037 NCBI chrNW_004955439:14,282,985...14,311,330 JBrowse link
G Klhl22 kelch like family member 22 ISO (PMID:29769719) UniProtKB PMID:29769719 NCBI chrNW_004955442:19,010,971...19,051,300 JBrowse link
G Lep leptin ISO (PMID:25060689)
(MGI:MGI:5705211|PMID:25060689)
UniProtKB PMID:25060689 MGI:MGI:5705211 NCBI chrNW_004955479:9,266,604...9,276,568
Ensembl chrNW_004955479:9,274,516...9,279,472
JBrowse link
G Lepr leptin receptor ISO (PMID:25060689) UniProtKB PMID:25060689 NCBI chrNW_004955423:25,108,897...25,185,315
Ensembl chrNW_004955423:25,111,266...25,185,407
JBrowse link
G Mcl1 MCL1 apoptosis regulator, BCL2 family member ISO (PMID:24113155) UniProtKB PMID:24113155 NCBI chrNW_004955413:238,043...243,317 JBrowse link
G Mtmr8 myotubularin related protein 8 ISO (PMID:22647598) UniProtKB PMID:22647598 NCBI chrNW_004955475:4,358,264...4,391,349 JBrowse link
G Mtmr9 myotubularin related protein 9 ISO (PMID:22647598) UniProtKB PMID:22647598 NCBI chrNW_004955403:52,689,101...52,732,354
Ensembl chrNW_004955403:52,689,101...52,732,354
JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO (PMID:22424946)
(PMID:22576015), (PMID:30704899)
(MGI:MGI:5285135|PMID:21258367)
RGD
CAFA
UniProt
UniProtKB
PMID:21258367, PMID:22424946, PMID:22576015, PMID:24725502, PMID:30704899 MGI:MGI:5285135, RGD:10040964 NCBI chrNW_004955486:2,487,642...2,599,694
Ensembl chrNW_004955486:2,487,642...2,599,694
JBrowse link
G Nampt nicotinamide phosphoribosyltransferase ISO RGD PMID:26601421 RGD:13781888 NCBI chrNW_004955410:10,717,664...10,742,109
Ensembl chrNW_004955410:10,717,664...10,751,177
JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator ISO (MGI:MGI:6283395|PMID:20181828)
(PMID:20181828)
UniProt PMID:20181828 MGI:MGI:6283395, RGD:14390062 NCBI chrNW_004955493:6,746,380...6,747,763
Ensembl chrNW_004955493:6,746,380...6,747,763
JBrowse link
G Ptk2 protein tyrosine kinase 2 ISO (MGI:MGI:5888970|PMID:27994061) MGI PMID:27994061 MGI:MGI:5888970 NCBI chrNW_004955461:14,337,914...14,622,779
Ensembl chrNW_004955461:14,337,914...14,556,931
JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 ISO (PMID:23991106) UniProtKB PMID:23991106 NCBI chrNW_004955435:17,082,762...17,139,067 JBrowse link
G Rasip1 Ras interacting protein 1 ISO (PMID:22354037) BHF-UCL PMID:22354037 NCBI chrNW_004955559:1,830,574...1,844,107
Ensembl chrNW_004955559:1,831,123...1,843,905
JBrowse link
G Rnf5 ring finger protein 5 ISO (MGI:MGI:5469257|PMID:23093945) MGI PMID:23093945 MGI:MGI:5469257 NCBI chrNW_004955437:643,133...645,528
Ensembl chrNW_004955437:643,170...645,528
JBrowse link
G Rraga Ras related GTP binding A ISO (PMID:25936802) UniProtKB PMID:25936802 NCBI chrNW_004955434:21,509,528...21,510,885
Ensembl chrNW_004955434:21,509,529...21,510,470
JBrowse link
G Rubcn rubicon autophagy regulator ISO (PMID:19270696) UniProtKB PMID:19270696 NCBI chrNW_004955420:12,124,193...12,187,154
Ensembl chrNW_004955420:12,123,450...12,187,154
JBrowse link
G Sirt2 sirtuin 2 ISO (PMID:20543840) UniProtKB PMID:20543840 NCBI chrNW_004955468:626,365...644,441
Ensembl chrNW_004955468:626,365...644,441
JBrowse link
G Stat3 signal transducer and activator of transcription 3 ISO (PMID:26962683) UniProt PMID:26962683 NCBI chrNW_004955451:16,320,326...16,348,505
Ensembl chrNW_004955451:16,319,904...16,357,687
JBrowse link
G Tbc1d14 TBC1 domain family member 14 ISO (PMID:22613832) BHF-UCL PMID:22613832 NCBI chrNW_004955514:3,485,975...3,553,840
Ensembl chrNW_004955514:3,485,841...3,567,377
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 ISO (MGI:MGI:5906931|PMID:28802038) ARUK-UCL PMID:28802038 MGI:MGI:5906931 NCBI chrNW_004955437:7,780,886...7,785,597
Ensembl chrNW_004955437:7,780,679...7,785,697
JBrowse link
G Wdr6 WD repeat domain 6 ISO (PMID:22354037) BHF-UCL PMID:22354037 NCBI chrNW_004955532:1,029,857...1,039,020
Ensembl chrNW_004955532:1,028,466...1,039,020
JBrowse link
negative regulation of autophagy of mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pink1 PTEN induced kinase 1 ISO (PMID:19279012) ParkinsonsUK-UCL PMID:19279012 NCBI chrNW_004955452:1,171,115...1,186,338
Ensembl chrNW_004955452:1,171,205...1,185,125
JBrowse link
G Tspo translocator protein ISO (PMID:25470454)
(MGI:MGI:5689082|PMID:25470454)
ParkinsonsUK-UCL PMID:25470454 MGI:MGI:5689082 NCBI chrNW_004955413:28,309,105...28,315,075
Ensembl chrNW_004955413:28,308,658...28,315,075
JBrowse link
negative regulation of cellular protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atraid all-trans retinoic acid induced differentiation factor ISO (PMID:21723284) UniProtKB PMID:21723284 NCBI chrNW_004955469:9,194,656...9,203,292 JBrowse link
G Cdk2 cyclin dependent kinase 2 ISO (PMID:15750306) AgBase PMID:15750306 NCBI chrNW_004955458:3,555,603...3,561,063
Ensembl chrNW_004955458:3,555,603...3,562,120
JBrowse link
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 ISO (PMID:16173922) UniProtKB PMID:16173922 NCBI chrNW_004955451:13,160,811...13,170,012
Ensembl chrNW_004955451:13,120,761...13,170,073
JBrowse link
G Dab2ip DAB2 interacting protein ISO (PMID:19903888) UniProtKB PMID:19903888 NCBI chrNW_004955419:6,229,437...6,416,619
Ensembl chrNW_004955419:6,228,591...6,416,402
JBrowse link
G F13b coagulation factor XIII B chain ISO (MGI:MGI:5645809|PMID:18224415) MGI PMID:18224415 MGI:MGI:5645809 NCBI chrNW_004955406:33,633,911...33,660,506
Ensembl chrNW_004955406:33,632,144...33,660,535
JBrowse link
G Nell1 neural EGFL like 1 ISO (PMID:21723284) UniProtKB PMID:21723284 NCBI chrNW_004955476:1,445,234...2,236,954
Ensembl chrNW_004955476:1,445,353...2,233,146
JBrowse link
G Rgp1 RGP1 homolog, RAB6A GEF complex partner 1 ISO (PMID:23091056) UniProtKB PMID:23091056 NCBI chrNW_004955472:550,198...554,038
Ensembl chrNW_004955472:550,198...554,038
JBrowse link
G Ric1 RIC1 homolog, RAB6A GEF complex partner 1 ISO (PMID:23091056) UniProtKB PMID:23091056 NCBI chrNW_004955434:9,675,654...9,770,174
Ensembl chrNW_004955434:9,675,654...9,770,174
JBrowse link
negative regulation of chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsa cathepsin A ISO (MGI:MGI:5700310|PMID:12505983)
(PMID:12505983)
ParkinsonsUK-UCL PMID:12505983 MGI:MGI:5700310 NCBI chrNW_004955445:11,399,151...11,405,069
Ensembl chrNW_004955445:11,399,151...11,405,069
JBrowse link
G Snca synuclein alpha ISO (PMID:20697033) ParkinsonsUK-UCL PMID:20697033 NCBI chrNW_004955405:854,011...962,741
Ensembl chrNW_004955405:853,946...965,403
JBrowse link
negative regulation of collagen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cst3 cystatin C ISO (PMID:10545518) BHF-UCL PMID:10545518 NCBI chrNW_004955415:30,507,972...30,512,109 JBrowse link
negative regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 ISO (PMID:32354837) UniProt PMID:32354837 NCBI chrNW_004955455:5,612,087...5,660,543
Ensembl chrNW_004955455:5,611,093...5,660,104
JBrowse link
negative regulation of DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rgn regucalcin ISO RGD PMID:2001740 RGD:9590215 NCBI chrNW_004955516:958,416...978,829
Ensembl chrNW_004955516:955,680...978,910
JBrowse link
negative regulation of elastin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cst3 cystatin C ISO (PMID:10545518) BHF-UCL PMID:10545518 NCBI chrNW_004955415:30,507,972...30,512,109 JBrowse link
negative regulation of ER-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sgta small glutamine rich tetratricopeptide repeat containing alpha ISO (PMID:23129660) UniProtKB PMID:23129660 NCBI chrNW_004955495:5,025,038...5,051,810
Ensembl chrNW_004955495:5,031,229...5,052,389
JBrowse link
G Svip small VCP interacting protein ISO (PMID:17872946) UniProtKB PMID:17872946 NCBI chrNW_004955476:3,231,789...3,236,602 JBrowse link
G Usp14 ubiquitin specific peptidase 14 ISO (PMID:19135427) ParkinsonsUK-UCL PMID:19135427 NCBI chrNW_004955402:9,710,080...9,737,601
Ensembl chrNW_004955402:9,710,080...9,743,077
JBrowse link
negative regulation of ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp11 aquaporin 11 ISO (MGI:MGI:3813160|PMID:18606867) UniProt PMID:18606867 MGI:MGI:3813160 NCBI chrNW_004955414:14,245,682...14,260,717
Ensembl chrNW_004955414:14,245,682...14,260,717
JBrowse link
G Ubxn1 UBX domain protein 1 ISO (PMID:21135095) ParkinsonsUK-UCL PMID:21135095 NCBI chrNW_004955599:526,792...529,825
Ensembl chrNW_004955599:526,966...529,735
JBrowse link
G Usp25 ubiquitin specific peptidase 25 ISO (PMID:22590560) ParkinsonsUK-UCL PMID:22590560 NCBI chrNW_004955407:17,429,299...17,572,138
Ensembl chrNW_004955407:17,429,299...17,575,262
JBrowse link
negative regulation of fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acacb acetyl-CoA carboxylase beta ISO (MGI:MGI:3530688|PMID:15677334), (MGI:MGI:3629477|PMID:12920182) UniProtKB PMID:12920182, PMID:15677334 MGI:MGI:3530688, MGI:MGI:3629477 NCBI chrNW_004955455:10,282,308...10,427,439
Ensembl chrNW_004955455:10,308,192...10,426,076
JBrowse link
G Akt1 AKT serine/threonine kinase 1 ISO (PMID:16814735) BHF-UCL PMID:16814735 NCBI chrNW_004955538:3,208,711...3,224,386
Ensembl chrNW_004955538:3,208,710...3,229,904
JBrowse link
G Cnr1 cannabinoid receptor 1 ISO RGD PMID:19724020 RGD:2314644 NCBI chrNW_004955411:15,052,151...15,077,320
Ensembl chrNW_004955411:15,052,163...15,077,320
JBrowse link
G Dbi diazepam binding inhibitor, acyl-CoA binding protein ISO RGD PMID:11485163 RGD:2316274 NCBI chrNW_004955459:10,342,528...10,347,700 JBrowse link
G Mfsd2a major facilitator superfamily domain containing 2A ISO (MGI:MGI:5474727|PMID:23209793) ARUK-UCL PMID:23209793 MGI:MGI:5474727 NCBI chrNW_004955452:17,430,850...17,443,830
Ensembl chrNW_004955452:17,430,219...17,443,830
JBrowse link
G Plin5 perilipin 5 ISO (MGI:MGI:5440401|PMID:22532565)
(MGI:MGI:5559662|PMID:22675471), (MGI:MGI:5559666|PMID:21885430)
UniProtKB PMID:21885430, PMID:22532565, PMID:22675471 MGI:MGI:5440401, MGI:MGI:5559662, MGI:MGI:5559666 NCBI chrNW_004955495:4,406,590...4,414,783
Ensembl chrNW_004955495:4,407,246...4,416,848
JBrowse link
negative regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Etfbkmt electron transfer flavoprotein subunit beta lysine methyltransferase ISO (MGI:MGI:5700285|PMID:25023281)
(PMID:25416781)
UniProtKB PMID:25023281, PMID:25416781 MGI:MGI:5700285 NCBI chrNW_004955411:35,999,583...36,025,805 JBrowse link
negative regulation of glucose catabolic process to lactate via pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc25a12 solute carrier family 25 member 12 ISO RGD PMID:19764902 RGD:13628741 NCBI chrNW_004955449:3,093,603...3,182,513
Ensembl chrNW_004955449:3,093,603...3,186,737
JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase ISO (MGI:MGI:4867601|PMID:20935145) MGI PMID:20935145 MGI:MGI:4867601 NCBI chrNW_004955413:2,129,719...2,153,873
Ensembl chrNW_004955413:2,129,678...2,154,380
JBrowse link
G Tp53 tumor protein p53 ISO (MGI:MGI:4867601|PMID:20935145) MGI PMID:20935145 MGI:MGI:4867601 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928
JBrowse link
negative regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1b adrenoceptor alpha 1B ISO (MGI:MGI:3027459|PMID:14581480) MGI PMID:14581480 MGI:MGI:3027459 NCBI chrNW_004955408:13,883,574...13,937,798
Ensembl chrNW_004955408:13,883,574...13,937,709
JBrowse link
G Ins insulin ISO (PMID:381941) BHF-UCL PMID:381941 NCBI chrNW_004955422:13,909,408...13,910,419
Ensembl chrNW_004955422:13,909,407...13,910,419
JBrowse link
negative regulation of glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 ISO (MGI:MGI:3759354|PMID:17828264) UniProtKB PMID:17828264 MGI:MGI:3759354 NCBI chrNW_004955422:18,799,372...18,812,458
Ensembl chrNW_004955422:18,799,372...18,812,711
JBrowse link
G Cbfa2t3 CBFA2/RUNX1 partner transcriptional co-repressor 3 ISO (PMID:23840896) UniProtKB PMID:23840896 NCBI chrNW_004955541:2,724,369...2,777,540
Ensembl chrNW_004955541:2,724,312...2,777,592
JBrowse link
G Ddit4 DNA damage inducible transcript 4 ISO (MGI:MGI:4440406|PMID:20176937) MGI PMID:20176937 MGI:MGI:4440406 NCBI chrNW_004955437:19,322,407...19,324,562
Ensembl chrNW_004955437:19,322,407...19,324,562
JBrowse link
G Fbp1 fructose-bisphosphatase 1 ISO (PMID:19881551)
(PMID:25043030)
UniProtKB
CAFA
PMID:19881551, PMID:25043030 NCBI chrNW_004955422:21,537,337...21,569,174
Ensembl chrNW_004955422:21,536,667...21,569,433
JBrowse link
G Hdac4 histone deacetylase 4 ISO (MGI:MGI:4365327|PMID:19109424) BHF-UCL PMID:19109424 MGI:MGI:4365327 NCBI chrNW_004955542:1,629,691...1,886,160
Ensembl chrNW_004955542:1,629,691...1,886,210
JBrowse link
G Ier3 immediate early response 3 ISO (MGI:MGI:4437986|PMID:19096392) MGI PMID:19096392 MGI:MGI:4437986 NCBI chrNW_004955583:730,353...731,301
Ensembl chrNW_004955583:730,289...731,260
JBrowse link
G Mtch2 mitochondrial carrier 2 ISO (MGI:MGI:5662300|PMID:26219591) MGI PMID:26219591 MGI:MGI:5662300 NCBI chrNW_004955422:672,301...690,989
Ensembl chrNW_004955422:672,301...690,989
JBrowse link
G Myog myogenin ISO RGD PMID:10225962 RGD:9686132 NCBI chrNW_004955406:39,099,044...39,102,479
Ensembl chrNW_004955406:39,099,716...39,102,501
JBrowse link
G Ncor1 nuclear receptor corepressor 1 ISO (PMID:19955185) BHF-UCL PMID:19955185 NCBI chrNW_004955467:1,408,292...1,568,539
Ensembl chrNW_004955467:1,409,281...1,546,842
JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator ISO (PMID:30451898) UniProt PMID:30451898 NCBI chrNW_004955493:6,746,380...6,747,763
Ensembl chrNW_004955493:6,746,380...6,747,763
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha ISO (PMID:19955185) BHF-UCL PMID:19955185 NCBI chrNW_004955413:30,306,563...30,366,245
Ensembl chrNW_004955413:30,307,219...30,359,500
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO RGD PMID:22343369 RGD:7242186 NCBI chrNW_004955480:543,397...1,188,376
Ensembl chrNW_004955480:1,078,322...1,188,435
JBrowse link
G Sirt6 sirtuin 6 ISO (MGI:MGI:4881401|PMID:20141841), (MGI:MGI:5619441|PMID:23217706) CACAO PMID:20141841, PMID:23217706 MGI:MGI:4881401, MGI:MGI:5619441 NCBI chrNW_004955495:4,641,883...4,650,518
Ensembl chrNW_004955495:4,644,023...4,650,083
JBrowse link
G Stat3 signal transducer and activator of transcription 3 ISO (MGI:MGI:5441121|PMID:22891351) MGI PMID:22891351 MGI:MGI:5441121 NCBI chrNW_004955451:16,320,326...16,348,505
Ensembl chrNW_004955451:16,319,904...16,357,687
JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase ISO (MGI:MGI:4867601|PMID:20935145) MGI PMID:20935145 MGI:MGI:4867601 NCBI chrNW_004955413:2,129,719...2,153,873
Ensembl chrNW_004955413:2,129,678...2,154,380
JBrowse link
negative regulation of glycolytic process through fructose-6-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) ISO (MGI:MGI:3820439|PMID:18698006) MGI PMID:18698006 MGI:MGI:3820439 NCBI chrNW_004955451:17,318,600...17,330,943
Ensembl chrNW_004955451:17,315,024...17,328,103
JBrowse link
negative regulation of lipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acacb acetyl-CoA carboxylase beta ISO (MGI:MGI:3530688|PMID:15677334) UniProtKB PMID:15677334 MGI:MGI:3530688 NCBI chrNW_004955455:10,282,308...10,427,439
Ensembl chrNW_004955455:10,308,192...10,426,076
JBrowse link
G Adora1 adenosine A1 receptor ISO RGD PMID:15220221 RGD:1625243 NCBI chrNW_004955406:39,148,811...39,183,577
Ensembl chrNW_004955406:39,149,689...39,187,688
JBrowse link
G Adra2a adrenoceptor alpha 2A ISO (PMID:10948198) BHF-UCL PMID:10948198 NCBI chrNW_004955485:384,405...387,332
Ensembl chrNW_004955485:385,800...387,240
JBrowse link
G Alk ALK receptor tyrosine kinase ISO (MGI:MGI:6442464|PMID:32442405) UniProt PMID:32442405 MGI:MGI:6442464 NCBI chrNW_004955469:11,049,373...11,751,235
Ensembl chrNW_004955469:11,047,048...11,548,233
JBrowse link
G Apoa2 apolipoprotein A2 ISO (PMID:14967812) BHF-UCL PMID:14967812 NCBI chrNW_004955468:12,977,956...12,979,282
Ensembl chrNW_004955468:12,977,956...12,979,753
JBrowse link
G Apoc1 apolipoprotein C1 ISO (PMID:15576844) BHF-UCL PMID:15576844 NCBI chrNW_004955555:2,005,962...2,007,239 JBrowse link
G Apoc3 apolipoprotein C3 ISO (PMID:15576844) BHF-UCL PMID:15576844 NCBI chrNW_004955412:18,165,667...18,168,015
Ensembl chrNW_004955412:18,165,667...18,168,015
JBrowse link
G Bscl2 BSCL2 lipid droplet biogenesis associated, seipin ISO (MGI:MGI:5319118|PMID:22269949) UniProtKB PMID:22269949 MGI:MGI:5319118 NCBI chrNW_004955599:505,725...514,225
Ensembl chrNW_004955599:507,501...514,151
JBrowse link
G Cidea cell death inducing DFFA like effector a ISO (MGI:MGI:2673116|PMID:12910269)
(PMID:15919794)
BHF-UCL PMID:12910269, PMID:15919794 MGI:MGI:2673116 NCBI chrNW_004955402:1,090,372...1,096,621
Ensembl chrNW_004955402:1,090,518...1,096,569
JBrowse link
G Crtc3 CREB regulated transcription coactivator 3 ISO (MGI:MGI:4867567|PMID:21164481) MGI PMID:21164481 MGI:MGI:4867567 NCBI chrNW_004955416:14,672,291...14,768,879
Ensembl chrNW_004955416:14,672,291...14,765,893
JBrowse link
G Fmc1 formation of mitochondrial complex V assembly factor 1 homolog ISO (MGI:MGI:5706869|PMID:25912136) MGI PMID:25912136 MGI:MGI:5706869 NCBI chrNW_004955494:3,722,359...3,730,217
Ensembl chrNW_004955494:3,722,519...3,728,622
JBrowse link
G Hcar1 hydroxycarboxylic acid receptor 1 ISO (MGI:MGI:3839706|PMID:19047060) MGI PMID:19047060 MGI:MGI:3839706 NCBI chrNW_004955482:5,998,796...6,002,093
Ensembl chrNW_004955482:5,998,796...6,002,093
JBrowse link
G Hcar2 hydroxycarboxylic acid receptor 2 ISO PMID:19141678 UniProt PMID:19141678 RGD:8553927 NCBI chrNW_004955482:6,007,307...6,009,353 JBrowse link
G Il1b interleukin 1 beta ISO (PMID:19032770) BHF-UCL PMID:19032770 NCBI chrNW_004955470:1,486,936...1,491,888
Ensembl chrNW_004955470:1,486,967...1,491,947
JBrowse link
G Ins insulin ISO (PMID:24675707) AgBase PMID:24675707 NCBI chrNW_004955422:13,909,408...13,910,419
Ensembl chrNW_004955422:13,909,407...13,910,419
JBrowse link
G Pde3b phosphodiesterase 3B ISO (PMID:11641262) BHF-UCL PMID:11641262 NCBI chrNW_004955414:29,783,999...29,911,329
Ensembl chrNW_004955414:29,783,963...29,909,685
JBrowse link
G Plin1 perilipin 1 ISO (PMID:21701568) AgBase PMID:21701568 NCBI chrNW_004955416:15,538,309...15,549,275
Ensembl chrNW_004955416:15,533,268...15,549,772
JBrowse link
G Plin5 perilipin 5 ISO (MGI:MGI:5559666|PMID:21885430) UniProtKB PMID:21885430 MGI:MGI:5559666 NCBI chrNW_004955495:4,406,590...4,414,783
Ensembl chrNW_004955495:4,407,246...4,416,848
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 ISO (MGI:MGI:5284794|PMID:15878856) UniProtKB PMID:15878856 MGI:MGI:5284794 NCBI chrNW_004955426:25,079,718...25,102,090
Ensembl chrNW_004955426:25,079,718...25,102,090
JBrowse link
G Tnf tumor necrosis factor ISO (PMID:19032770) BHF-UCL PMID:19032770 NCBI chrNW_004955437:117,267...119,899
Ensembl chrNW_004955437:117,206...120,700
JBrowse link
negative regulation of low-density lipoprotein particle receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 ISO (PMID:22848640)
(MGI:MGI:5446858|PMID:22848640)
BHF-UCL PMID:22848640 MGI:MGI:5446858 NCBI chrNW_004955450:14,545,586...14,574,161
Ensembl chrNW_004955450:14,512,381...14,574,696
JBrowse link
G Furin furin, paired basic amino acid cleaving enzyme ISO (PMID:16912035) HGNC PMID:16912035 NCBI chrNW_004955416:14,915,031...14,947,634
Ensembl chrNW_004955416:14,936,546...14,949,252
JBrowse link
negative regulation of lysosomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Laptm4b lysosomal protein transmembrane 4 beta ISO (PMID:25588945) UniProtKB PMID:25588945 NCBI chrNW_004955417:13,574,493...13,625,669
Ensembl chrNW_004955417:13,574,721...13,625,313
JBrowse link
G Mgat3 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase ISO (MGI:MGI:5751042|PMID:25592972), (MGI:MGI:5816436|PMID:26467158) MGI PMID:25592972, PMID:26467158 MGI:MGI:5751042, MGI:MGI:5816436 NCBI chrNW_004955413:25,346,135...25,367,782
Ensembl chrNW_004955413:25,360,806...25,367,782
JBrowse link
G Vps35 VPS35 retromer complex component ISO (MGI:MGI:5694519|PMID:26203154) ParkinsonsUK-UCL PMID:26203154 MGI:MGI:5694519 NCBI chrNW_004955448:207,582...240,264
Ensembl chrNW_004955448:204,991...240,160
JBrowse link
negative regulation of macroautophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmox1 heme oxygenase 1 ISO (MGI:MGI:5430482|PMID:20705711) MGI PMID:20705711 MGI:MGI:5430482 NCBI chrNW_004955405:43,124,447...43,128,873
Ensembl chrNW_004955405:43,124,510...43,130,979
JBrowse link
G Lrrk2 leucine rich repeat kinase 2 ISO (PMID:19640926) ParkinsonsUK-UCL PMID:19640926 NCBI chrNW_004955505:84,324...216,923
Ensembl chrNW_004955505:81,796...216,923
JBrowse link
G Lzts1 leucine zipper tumor suppressor 1 ISO (PMID:22354037) BHF-UCL PMID:22354037 NCBI chrNW_004955403:43,909,722...43,962,965
Ensembl chrNW_004955403:43,909,681...43,962,971
JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO (PMID:25327288)
(MGI:MGI:3690270|PMID:16714284), (MGI:MGI:5563734|PMID:23274896)
MGI PMID:16714284, PMID:23274896, PMID:25327288 MGI:MGI:3690270, MGI:MGI:5563734 NCBI chrNW_004955486:2,487,642...2,599,694
Ensembl chrNW_004955486:2,487,642...2,599,694
JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 ISO (MGI:MGI:3723543|PMID:17468177) MGI PMID:17468177 MGI:MGI:3723543 NCBI chrNW_004955402:11,699,434...11,742,899
Ensembl chrNW_004955402:11,699,434...11,742,899
JBrowse link
G Nrbp2 nuclear receptor binding protein 2 ISO (PMID:22354037) BHF-UCL PMID:22354037 NCBI chrNW_004955454:2,500,360...2,507,372 JBrowse link
G Pink1 PTEN induced kinase 1 ISO (PMID:19279012) ParkinsonsUK-UCL PMID:19279012 NCBI chrNW_004955452:1,171,115...1,186,338
Ensembl chrNW_004955452:1,171,205...1,185,125
JBrowse link
G Poldip2 DNA polymerase delta interacting protein 2 ISO (MGI:MGI:5588624|PMID:24797518) MGI PMID:24797518 MGI:MGI:5588624 NCBI chrNW_004955481:4,776,721...4,785,817
Ensembl chrNW_004955481:4,776,721...4,785,817
JBrowse link
G Qsox1 quiescin sulfhydryl oxidase 1 ISO (PMID:24475161) CACAO PMID:24475161 NCBI chrNW_004955406:19,363,938...19,402,134 JBrowse link
G Smcr8 SMCR8-C9orf72 complex subunit ISO (PMID:28195531) HGNC PMID:28195531 NCBI chrNW_004955478:11,002,174...11,015,123
Ensembl chrNW_004955478:11,002,174...11,015,123
JBrowse link
G Tsc1 TSC complex subunit 1 ISO PMID:23435171 ParkinsonsUK-UCL PMID:23435171 RGD:10448950 NCBI chrNW_004955513:2,197,037...2,244,992
Ensembl chrNW_004955513:2,197,037...2,244,992
JBrowse link
G Tsc2 TSC complex subunit 2 ISO RGD PMID:24599401 RGD:11568679 NCBI chrNW_004955442:15,178,356...15,216,978
Ensembl chrNW_004955442:15,178,487...15,216,362
JBrowse link
G Usp36 ubiquitin specific peptidase 36 ISO (PMID:22622177) UniProtKB PMID:22622177 NCBI chrNW_004955506:3,824,598...3,861,919
Ensembl chrNW_004955506:3,824,556...3,862,098
JBrowse link
negative regulation of macroautophagy by TORC1 signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec16a C-type lectin domain containing 16A ISO (PMID:28223137) UniProtKB PMID:28223137 NCBI chrNW_004955442:7,369,616...7,584,052
Ensembl chrNW_004955442:7,368,952...7,584,703
JBrowse link
negative regulation of membrane protein ectodomain proteolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il10 interleukin 10 ISO (PMID:18383040) BHF-UCL PMID:18383040 NCBI chrNW_004955406:42,307,789...42,312,255
Ensembl chrNW_004955406:42,307,664...42,312,779
JBrowse link
G Lrig2 leucine rich repeats and immunoglobulin like domains 2 ISO (MGI:MGI:5702499|PMID:26651291) MGI PMID:26651291 MGI:MGI:5702499 NCBI chrNW_004955435:16,468,300...16,522,503
Ensembl chrNW_004955435:16,468,509...16,521,868
JBrowse link
G Ptpn3 protein tyrosine phosphatase non-receptor type 3 ISO (PMID:12207026) BHF-UCL PMID:12207026 NCBI chrNW_004955419:17,560,664...17,645,420
Ensembl chrNW_004955419:17,493,518...17,645,477
JBrowse link
G Timp1 TIMP metallopeptidase inhibitor 1 ISO (PMID:12714508) UniProtKB PMID:12714508 NCBI chrNW_004955516:507,113...511,360
Ensembl chrNW_004955516:505,789...512,118
JBrowse link
G Timp3 TIMP metallopeptidase inhibitor 3 ISO (PMID:18383040) BHF-UCL PMID:18383040 NCBI chrNW_004955405:41,613,976...41,655,813
Ensembl chrNW_004955405:41,613,966...41,655,813
JBrowse link
negative regulation of miRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tent2 terminal nucleotidyltransferase 2 ISO (PMID:23200856) UniProtKB PMID:23200856 NCBI chrNW_004955425:21,518,154...21,576,068
Ensembl chrNW_004955425:21,517,755...21,576,068
JBrowse link
negative regulation of mitochondrial RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrpprc leucine rich pentatricopeptide repeat containing ISO (MGI:MGI:5301479|PMID:21880015)
(MGI:MGI:5438202|PMID:22045337)
MGI PMID:21880015, PMID:22045337 MGI:MGI:5301479, MGI:MGI:5438202 NCBI chrNW_004955441:11,012,910...11,116,965 JBrowse link
G Slirp SRA stem-loop interacting RNA binding protein ISO (MGI:MGI:5438202|PMID:22045337) MGI PMID:22045337 MGI:MGI:5438202 NCBI chrNW_004955438:1,556,462...1,561,561 JBrowse link
negative regulation of mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec16a C-type lectin domain containing 16A ISO (MGI:MGI:5603233|PMID:24949970) MGI PMID:24949970 MGI:MGI:5603233 NCBI chrNW_004955442:7,369,616...7,584,052
Ensembl chrNW_004955442:7,368,952...7,584,703
JBrowse link
G Rnf41 ring finger protein 41 ISO (MGI:MGI:5603233|PMID:24949970) MGI PMID:24949970 MGI:MGI:5603233 NCBI chrNW_004955458:3,799,450...3,833,269
Ensembl chrNW_004955458:3,799,450...3,833,263
JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase ISO (MGI:MGI:5319065|PMID:22044588) MGI PMID:22044588 MGI:MGI:5319065 NCBI chrNW_004955413:2,129,719...2,153,873
Ensembl chrNW_004955413:2,129,678...2,154,380
JBrowse link
G Tp53 tumor protein p53 ISO (MGI:MGI:5319065|PMID:22044588) MGI PMID:22044588 MGI:MGI:5319065 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928
JBrowse link
G Usp30 ubiquitin specific peptidase 30 ISO RGD PMID:24896179 RGD:13208875 NCBI chrNW_004955455:10,234,779...10,257,959
Ensembl chrNW_004955455:10,192,426...10,257,951
JBrowse link
negative regulation of mitophagy in response to mitochondrial depolarization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Htra2 HtrA serine peptidase 2 ISO (MGI:MGI:5581539|PMID:24709290) ParkinsonsUK-UCL PMID:24709290 MGI:MGI:5581539 NCBI chrNW_004955424:11,255,756...11,259,170
Ensembl chrNW_004955424:11,255,756...11,259,170
JBrowse link
negative regulation of mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fmr1 FMRP translational regulator 1 ISO (PMID:25225333) CAFA PMID:25225333 NCBI chrNW_004955498:566,741...594,837
Ensembl chrNW_004955498:566,688...595,360
JBrowse link
G Pkp1 plakophilin 1 ISO (PMID:25225333) CAFA PMID:25225333 NCBI chrNW_004955406:37,420,019...37,465,588
Ensembl chrNW_004955406:37,419,856...37,465,655
JBrowse link
G Pkp3 plakophilin 3 ISO (PMID:25225333) CAFA PMID:25225333 NCBI chrNW_004955476:11,611,240...11,619,210
Ensembl chrNW_004955476:11,611,240...11,619,780
JBrowse link
negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx34 DExH-box helicase 34 ISO (PMID:23828042) UniProtKB PMID:23828042 NCBI chrNW_004955574:1,248,058...1,267,399
Ensembl chrNW_004955574:1,248,021...1,267,399
JBrowse link
G Nbas NBAS subunit of NRZ tethering complex ISO (PMID:23828042) UniProtKB PMID:23828042 NCBI chrNW_004955487:8,894,403...9,073,535
Ensembl chrNW_004955487:8,894,187...9,073,663
JBrowse link
G Pabpc1 poly(A) binding protein cytoplasmic 1 ISO (PMID:18447585) UniProtKB PMID:18447585 NCBI chrNW_004955417:15,872,906...15,885,246
Ensembl chrNW_004955417:15,868,934...15,885,247
JBrowse link
G Secisbp2 SECIS binding protein 2 ISO (MGI:MGI:5582859|PMID:24274065) MGI PMID:24274065 MGI:MGI:5582859 NCBI chrNW_004955515:2,697,370...2,729,425
Ensembl chrNW_004955515:2,698,075...2,730,074
JBrowse link
negative regulation of nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tent4a terminal nucleotidyltransferase 4A ISO (PMID:30026317) UniProt PMID:30026317 NCBI chrNW_004955504:4,443,051...4,476,373
Ensembl chrNW_004955504:4,443,051...4,476,520
JBrowse link
G Tent4b terminal nucleotidyltransferase 4B ISO (PMID:30026317) UniProt PMID:30026317 NCBI chrNW_004955433:8,288,432...8,347,347
Ensembl chrNW_004955433:8,288,432...8,347,347
JBrowse link
G Tob1 transducer of ERBB2, 1 ISO (PMID:18377426) UniProtKB PMID:18377426 NCBI chrNW_004955451:10,950,270...10,963,183 JBrowse link
negative regulation of phosphatidylcholine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoc1 apolipoprotein C1 ISO (PMID:2302419) BHF-UCL PMID:2302419 NCBI chrNW_004955555:2,005,962...2,007,239 JBrowse link
negative regulation of proteasomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alad aminolevulinate dehydratase ISO (PMID:8175643) CAFA PMID:8175643 NCBI chrNW_004955419:14,093,010...14,104,376
Ensembl chrNW_004955419:14,093,010...14,104,545
JBrowse link
G Gabarapl2 GABA type A receptor associated protein like 2 ISO (PMID:21669198) BHF-UCL PMID:21669198 NCBI chrNW_004955484:1,991,020...2,004,925
Ensembl chrNW_004955484:1,991,020...2,004,925
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 ISO PMID:17517623
(MGI:MGI:6148636|PMID:17517623)
ARUK-UCL PMID:17517623 MGI:MGI:6148636, RGD:13514081 NCBI chrNW_004955437:9,872,649...9,878,459
Ensembl chrNW_004955437:9,873,908...9,878,459
JBrowse link
G Lamp3 lysosomal associated membrane protein 3 ISO (PMID:25681212) ParkinsonsUK-UCL PMID:25681212 NCBI chrNW_004955420:24,155,793...24,185,366 JBrowse link
G LOC102030058 protein SCO1 homolog, mitochondrial ISO (MGI:MGI:5643882|PMID:25683716) MGI PMID:25683716 MGI:MGI:5643882 NCBI chrNW_004955467:6,519,873...6,535,321
Ensembl chrNW_004955467:6,519,873...6,537,753
JBrowse link
G Marchf7 membrane associated ring-CH-type finger 7 ISO (PMID:29295817) UniProtKB PMID:29295817 NCBI chrNW_004955449:13,834,561...13,875,864
Ensembl chrNW_004955449:13,835,811...13,859,699
JBrowse link
G Ophn1 oligophrenin 1 ISO (MGI:MGI:5303043|PMID:21874017) UniProtKB PMID:21874017 MGI:MGI:5303043 NCBI chrNW_004955475:7,576,629...8,019,132
Ensembl chrNW_004955475:7,581,675...8,018,139
JBrowse link
G Prkcg protein kinase C gamma ISO (MGI:MGI:5467682|PMID:23185022) UniProtKB PMID:23185022 MGI:MGI:5467682 NCBI chrNW_004955604:262,182...279,259
Ensembl chrNW_004955604:262,071...279,259
JBrowse link
G Psme3ip1 proteasome activator subunit 3 interacting protein 1 ISO (PMID:29934401) UniProt PMID:29934401 NCBI chrNW_004955433:14,813,688...14,843,446
Ensembl chrNW_004955433:14,813,688...14,843,223
JBrowse link
G Psmf1 proteasome inhibitor subunit 1 ISO (PMID:10764772) UniProtKB PMID:10764772 NCBI chrNW_004955596:381,080...414,307
Ensembl chrNW_004955596:381,068...416,055
JBrowse link
G Usp19 ubiquitin specific peptidase 19 ISO (MGI:MGI:5614537|PMID:25088257) ParkinsonsUK-UCL PMID:25088257 MGI:MGI:5614537 NCBI chrNW_004955532:1,104,212...1,115,267
Ensembl chrNW_004955532:1,104,591...1,113,567
JBrowse link
negative regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag5 BAG cochaperone 5 ISO (PMID:24475098) ParkinsonsUK-UCL PMID:24475098 NCBI chrNW_004955538:2,412,297...2,416,094
Ensembl chrNW_004955538:2,412,297...2,415,132
JBrowse link
G Bag6 BAG cochaperone 6 ISO (MGI:MGI:3808636|PMID:18678708) UniProtKB PMID:18678708 MGI:MGI:3808636 NCBI chrNW_004955437:176,848...188,243
Ensembl chrNW_004955437:176,797...188,003
JBrowse link
G Camlg calcium modulating ligand ISO (PMID:20553626) UniProt PMID:20553626 NCBI chrNW_004955408:29,968,962...29,977,896
Ensembl chrNW_004955408:29,968,934...29,979,794
JBrowse link
G Ccar2 cell cycle and apoptosis regulator 2 ISO (PMID:23398316) UniProtKB PMID:23398316 NCBI chrNW_004955403:46,027,997...46,042,154
Ensembl chrNW_004955403:46,027,998...46,042,154
JBrowse link
G Clec16a C-type lectin domain containing 16A ISO (MGI:MGI:5603233|PMID:24949970) MGI PMID:24949970 MGI:MGI:5603233 NCBI chrNW_004955442:7,369,616...7,584,052
Ensembl chrNW_004955442:7,368,952...7,584,703
JBrowse link
G Ddrgk1 DDRGK domain containing 1 ISO (PMID:28263186) UniProtKB PMID:28263186 NCBI chrNW_004955415:14,085,404...14,098,220
Ensembl chrNW_004955415:14,085,404...14,098,856
JBrowse link
G Eif3h eukaryotic translation initiation factor 3 subunit H ISO (PMID:32269044) FlyBase PMID:32269044 NCBI chrNW_004955417:22,757,781...22,846,349
Ensembl chrNW_004955417:22,754,395...22,846,618
JBrowse link
G Fhit fragile histidine triad diadenosine triphosphatase ISO (PMID:15313915) UniProtKB PMID:15313915 NCBI chrNW_004955430:221,518...508,094 JBrowse link
G Gipc1 GIPC PDZ domain containing family member 1 ISO (MGI:MGI:3807767|PMID:11546783) BHF-UCL PMID:11546783 MGI:MGI:3807767 NCBI chrNW_004955415:33,067,689...33,077,749
Ensembl chrNW_004955415:33,067,689...33,074,730
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 ISO (PMID:16280321)
(PMID:24613385)
MGI
UniProtKB
PMID:16280321, PMID:24613385 NCBI chrNW_004955437:9,872,649...9,878,459
Ensembl chrNW_004955437:9,873,908...9,878,459
JBrowse link
G Klhl40 kelch like family member 40 ISO (MGI:MGI:5586592|PMID:24960163) MGI PMID:24960163 MGI:MGI:5586592 NCBI chrNW_004955420:28,117,553...28,122,391
Ensembl chrNW_004955420:28,117,898...28,122,270
JBrowse link
G Map1a microtubule associated protein 1A ISO (MGI:MGI:5703671|PMID:26609151) ARUK-UCL PMID:26609151 MGI:MGI:5703671 NCBI chrNW_004955416:10,052,964...10,073,318
Ensembl chrNW_004955416:10,053,010...10,071,421
JBrowse link
G Mtm1 myotubularin 1 ISO (MGI:MGI:5510937|PMID:23695157) MGI PMID:23695157 MGI:MGI:5510937 NCBI chrNW_004955498:6,329,402...6,444,708
Ensembl chrNW_004955498:6,329,275...6,445,169
JBrowse link
G N4bp1 NEDD4 binding protein 1 ISO (MGI:MGI:3829128|PMID:17592138) UniProtKB PMID:17592138 MGI:MGI:3829128 NCBI chrNW_004955474:6,796,068...6,814,906
Ensembl chrNW_004955474:6,796,066...6,814,906
JBrowse link
G Nop53 NOP53 ribosome biogenesis factor ISO (PMID:22522597) UniProtKB PMID:22522597 NCBI chrNW_004955574:1,505,997...1,514,680
Ensembl chrNW_004955574:1,506,022...1,517,130
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase ISO (PMID:26678539) UniProtKB PMID:26678539 NCBI chrNW_004955475:11,062,258...11,112,252
Ensembl chrNW_004955475:11,062,076...11,114,169
JBrowse link
G Park7 Parkinsonism associated deglycase ISO (PMID:17015834) ParkinsonsUK-UCL PMID:17015834 NCBI chrNW_004955486:4,974,130...4,985,927
Ensembl chrNW_004955486:4,969,497...4,985,885
JBrowse link
G Pbk PDZ binding kinase ISO (MGI:MGI:5293269|PMID:21715333) MGI PMID:21715333 MGI:MGI:5293269 NCBI chrNW_004955403:50,332,167...50,353,147
Ensembl chrNW_004955403:50,330,981...50,352,570
JBrowse link
G Rpl11 ribosomal protein L11 ISO (MGI:MGI:5897550|PMID:21804542) UniProtKB PMID:21804542 MGI:MGI:5897550 NCBI chrNW_004955452:3,626,609...3,630,911
Ensembl chrNW_004955452:3,626,609...3,633,209
JBrowse link
G Rybp RING1 and YY1 binding protein ISO (PMID:27060496) UniProtKB PMID:27060496 NCBI chrNW_004955421:15,728,778...15,803,150
Ensembl chrNW_004955421:15,728,580...15,803,150
JBrowse link
G Sdcbp syndecan binding protein ISO (PMID:25893292) UniProtKB PMID:25893292 NCBI chrNW_004955454:17,093,930...17,113,491
Ensembl chrNW_004955454:17,089,232...17,113,484
JBrowse link
G Senp1 SUMO specific peptidase 1 ISO (MGI:MGI:3818351|PMID:17981124) MGI PMID:17981124 MGI:MGI:3818351 NCBI chrNW_004955500:6,924,445...6,978,482
Ensembl chrNW_004955500:6,926,548...6,979,230
JBrowse link
G Shh sonic hedgehog signaling molecule ISO (MGI:MGI:3624046|PMID:16611981) MGI PMID:16611981 MGI:MGI:3624046 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 ISO (MGI:MGI:5310666|PMID:22285184) MGI PMID:22285184 MGI:MGI:5310666 NCBI chrNW_004955420:24,594,057...24,729,108
Ensembl chrNW_004955420:24,593,830...24,729,108
JBrowse link
G Taf9 TATA-box binding protein associated factor 9 ISO (PMID:11278372) BHF-UCL PMID:11278372 NCBI chrNW_004955575:74,506...76,272
Ensembl chrNW_004955575:74,506...76,272
JBrowse link
G Tlk2 tousled like kinase 2 ISO (PMID:20016786) UniProtKB PMID:20016786 NCBI chrNW_004955478:9,100,863...9,229,448
Ensembl chrNW_004955478:9,100,863...9,231,281
JBrowse link
G Ttc36 tetratricopeptide repeat domain 36 ISO (MGI:MGI:6362140|PMID:31537781) MGI PMID:31537781 MGI:MGI:6362140 NCBI chrNW_004955412:19,670,590...19,672,495 JBrowse link
G Ubxn1 UBX domain protein 1 ISO (PMID:20351172) UniProtKB PMID:20351172 NCBI chrNW_004955599:526,792...529,825
Ensembl chrNW_004955599:526,966...529,735
JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 ISO (PMID:23770237) UniProtKB PMID:23770237 NCBI chrNW_004955406:30,432,652...30,468,741 JBrowse link
G Usp7 ubiquitin specific peptidase 7 ISO (PMID:26678539) UniProtKB PMID:26678539 NCBI chrNW_004955442:9,316,022...9,355,751
Ensembl chrNW_004955442:9,315,225...9,356,393
JBrowse link
G Wac WW domain containing adaptor with coiled-coil ISO (PMID:22354037) BHF-UCL PMID:22354037 NCBI chrNW_004955462:2,358,842...2,435,644
Ensembl chrNW_004955462:2,358,842...2,435,628
JBrowse link
negative regulation of protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrb1 adhesion G protein-coupled receptor B1 ISO (MGI:MGI:5643972|PMID:25751059) UniProtKB PMID:25751059 MGI:MGI:5643972 NCBI chrNW_004955454:1,250,261...1,313,547
Ensembl chrNW_004955454:1,237,363...1,314,127
JBrowse link
G Agap2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 ISO (PMID:18374643) MGI PMID:18374643 NCBI chrNW_004955458:5,436,544...5,448,201
Ensembl chrNW_004955458:5,436,630...5,448,057
JBrowse link
G Azin1 antizyme inhibitor 1 ISO downregulates antizyme degradation of ODC
(PMID:17900240)
RGD
UniProtKB
PMID:8631929, PMID:17900240 RGD:633334 NCBI chrNW_004955417:27,231,695...27,259,564
Ensembl chrNW_004955417:27,231,696...27,259,564
JBrowse link
G Azin2 antizyme inhibitor 2 ISO (PMID:17900240) UniProtKB PMID:17900240 NCBI chrNW_004955452:11,304,345...11,330,370
Ensembl chrNW_004955452:11,303,499...11,330,555
JBrowse link
G Banp BTG3 associated nuclear protein ISO (MGI:MGI:3579758|PMID:15701641) MGI PMID:15701641 MGI:MGI:3579758 NCBI chrNW_004955541:2,169,303...2,256,779
Ensembl chrNW_004955541:2,169,303...2,256,779
JBrowse link
G Dedd death effector domain containing ISO (MGI:MGI:5000188|PMID:21135503) MGI PMID:21135503 MGI:MGI:5000188 NCBI chrNW_004955468:12,885,547...12,897,522
Ensembl chrNW_004955468:12,885,553...12,897,164
JBrowse link
G Dysf dysferlin ISO (MGI:MGI:5433472|PMID:20724702) MGI PMID:20724702 MGI:MGI:5433472 NCBI chrNW_004955424:13,756,130...13,970,437
Ensembl chrNW_004955424:13,756,130...13,970,436
JBrowse link
G Egfr epidermal growth factor receptor ISO (PMID:17115032) UniProtKB PMID:17115032 NCBI chrNW_004955456:321,222...456,431 JBrowse link
G Fbxo43 F-box protein 43 ISO (MGI:MGI:3663227|PMID:16966421) MGI PMID:16966421 MGI:MGI:3663227 NCBI chrNW_004955417:15,394,481...15,406,751
Ensembl chrNW_004955417:15,390,969...15,406,751
JBrowse link
G Flna filamin A ISO (PMID:18322202) BHF-UCL PMID:18322202 NCBI chrNW_004955580:874,233...895,172
Ensembl chrNW_004955580:874,233...895,232
JBrowse link
G Fmn2 formin 2 ISO (PMID:23375502) UniProtKB PMID:23375502 NCBI chrNW_004955406:11,358,585...11,666,102 JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase ISO (MGI:MGI:3775717|PMID:16841086) MGI PMID:16841086 MGI:MGI:3775717 NCBI chrNW_004955411:36,403,156...36,597,660
Ensembl chrNW_004955411:36,401,842...36,512,054
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A ISO (MGI:MGI:3054180|PMID:15317856) MGI PMID:15317856 MGI:MGI:3054180 NCBI chrNW_004955442:8,171,114...8,565,187
Ensembl chrNW_004955442:8,174,232...8,562,059
JBrowse link
G Grin2c glutamate ionotropic receptor NMDA type subunit 2C ISO (MGI:MGI:3054180|PMID:15317856) MGI PMID:15317856 MGI:MGI:3054180 NCBI chrNW_004955553:1,729,431...1,746,754
Ensembl chrNW_004955553:1,729,860...1,737,751
JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase ISO (MGI:MGI:6270905|PMID:20876579) ARUK-UCL PMID:20876579 MGI:MGI:6270905 NCBI chrNW_004955425:25,362,165...25,380,611
Ensembl chrNW_004955425:25,359,884...25,380,745
JBrowse link
G Ins insulin ISO (PMID:15185208) UniProtKB PMID:15185208 NCBI chrNW_004955422:13,909,408...13,910,419
Ensembl chrNW_004955422:13,909,407...13,910,419
JBrowse link
G Irak3 interleukin 1 receptor associated kinase 3 ISO (PMID:17379480), (PMID:18156187)
(MGI:MGI:3843426|PMID:17379480)
BHF-UCL PMID:17379480, PMID:18156187 MGI:MGI:3843426 NCBI chrNW_004955458:12,839,995...12,880,285
Ensembl chrNW_004955458:12,846,237...12,879,316
JBrowse link
G LOC102027002 lanosterol 14-alpha demethylase ISO (MGI:MGI:6270905|PMID:20876579) ARUK-UCL PMID:20876579 MGI:MGI:6270905 NCBI chrNW_004955432:9,092,923...9,112,615
Ensembl chrNW_004955432:9,092,933...9,112,615
JBrowse link
G Mad2l1 mitotic arrest deficient 2 like 1 ISO (PMID:11459825) UniProtKB PMID:11459825 NCBI chrNW_004955428:20,421,718...20,443,394
Ensembl chrNW_004955428:20,421,723...20,430,307
JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 ISO (PMID:11459826) UniProtKB PMID:11459826 NCBI chrNW_004955486:2,191,903...2,197,193
Ensembl chrNW_004955486:2,191,903...2,198,538
JBrowse link
G Mdm4 MDM4 regulator of p53 ISO (PMID:10608892) UniProtKB PMID:10608892 NCBI chrNW_004955406:40,346,617...40,387,977
Ensembl chrNW_004955406:40,346,588...40,387,977
JBrowse link
G Mycbp2 MYC binding protein 2 ISO (MGI:MGI:3849342|PMID:19398581) MGI PMID:19398581 MGI:MGI:3849342 NCBI chrNW_004955404:29,932,125...30,186,236
Ensembl chrNW_004955404:29,932,125...30,186,236
JBrowse link
G Nos2 nitric oxide synthase 2 ISO (MGI:MGI:4943392|PMID:18003616) BHF-UCL PMID:18003616 MGI:MGI:4943392 NCBI chrNW_004955481:5,197,957...5,232,406
Ensembl chrNW_004955481:5,201,234...5,231,961
JBrowse link
G Nrg1 neuregulin 1 ISO (MGI:MGI:4454957|PMID:20448149) MGI PMID:20448149 MGI:MGI:4454957 NCBI chrNW_004955463:8,009,436...9,037,116
Ensembl chrNW_004955463:8,009,530...9,037,116
JBrowse link
G Park7 Parkinsonism associated deglycase ISO (MGI:MGI:5575789|PMID:24899725) ParkinsonsUK-UCL PMID:24899725 MGI:MGI:5575789 NCBI chrNW_004955486:4,974,130...4,985,927
Ensembl chrNW_004955486:4,969,497...4,985,885
JBrowse link
G Phb prohibitin ISO (PMID:24732013) UniProtKB PMID:24732013 NCBI chrNW_004955451:12,110,290...12,119,870
Ensembl chrNW_004955451:12,110,290...12,120,124
JBrowse link
G Pin1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 ISO (PMID:11533658) ParkinsonsUK-UCL PMID:11533658 NCBI chrNW_004955495:1,250,557...1,261,617
Ensembl chrNW_004955495:1,250,453...1,266,235
JBrowse link
G Prkcg protein kinase C gamma ISO (PMID:15808853) HGNC PMID:15808853 NCBI chrNW_004955604:262,182...279,259
Ensembl chrNW_004955604:262,071...279,259
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit ISO (MGI:MGI:3581324|PMID:15923614) MGI PMID:15923614 MGI:MGI:3581324 NCBI chrNW_004955422:19,602,930...19,612,263
Ensembl chrNW_004955422:19,603,345...19,611,516
JBrowse link
G Rilp Rab interacting lysosomal protein ISO (PMID:17010938) UniProtKB PMID:17010938 NCBI chrNW_004955481:1,531,175...1,534,794
Ensembl chrNW_004955481:1,531,574...1,534,443
JBrowse link
G Serpine2 serpin family E member 2 ISO (MGI:MGI:3654805|PMID:16319172)
(MGI:MGI:3521551|PMID:15509762)
MGI PMID:15509762, PMID:16319172 MGI:MGI:3521551, MGI:MGI:3654805 NCBI chrNW_004955453:10,049,822...10,076,155
Ensembl chrNW_004955453:10,027,104...10,076,645
JBrowse link
G Sf3b3 splicing factor 3b subunit 3 ISO (PMID:23951410) CACAO PMID:23951410 NCBI chrNW_004955484:3,307,794...3,357,600
Ensembl chrNW_004955484:3,307,794...3,357,600
JBrowse link
G Shh sonic hedgehog signaling molecule ISO (MGI:MGI:3624046|PMID:16611981) MGI PMID:16611981 MGI:MGI:3624046 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Sirt2 sirtuin 2 ISO (PMID:20543840) UniProtKB PMID:20543840 NCBI chrNW_004955468:626,365...644,441
Ensembl chrNW_004955468:626,365...644,441
JBrowse link
G Smad3 SMAD family member 3 ISO PMID:16690606
PMID:20097766
CACAO
BHF-UCL
PMID:16690606, PMID:20097766 RGD:11079190, RGD:15023472 NCBI chrNW_004955450:8,747,651...8,842,003
Ensembl chrNW_004955450:8,747,651...8,842,136
JBrowse link
G Smad4 SMAD family member 4 ISO PMID:20097766 BHF-UCL PMID:20097766 RGD:11079190 NCBI chrNW_004955402:35,956,080...36,001,746
Ensembl chrNW_004955402:35,961,165...35,994,538
JBrowse link
G Snx12 sorting nexin 12 ISO (PMID:22719997) UniProtKB PMID:22719997 NCBI chrNW_004955475:10,632,938...10,641,452
Ensembl chrNW_004955475:10,474,697...10,641,723
JBrowse link
G Snx3 sorting nexin 3 ISO (PMID:18767904) UniProtKB PMID:18767904 NCBI chrNW_004955411:33,339,974...33,344,563
Ensembl chrNW_004955411:33,340,274...33,345,500
JBrowse link
G Trim40 tripartite motif containing 40 ISO (PMID:21474709) UniProtKB PMID:21474709 NCBI chrNW_004955583:242,054...260,565
Ensembl chrNW_004955583:242,054...259,008
JBrowse link
negative regulation of proteolysis involved in cellular protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Efna1 ephrin A1 ISO (PMID:24217950) ARUK-UCL PMID:24217950 NCBI chrNW_004955545:1,610,929...1,617,217
Ensembl chrNW_004955545:1,610,929...1,617,460
JBrowse link
G Epha4 EPH receptor A4 ISO (PMID:24217950) ARUK-UCL PMID:24217950 NCBI chrNW_004955453:12,099,800...12,240,199
Ensembl chrNW_004955453:12,099,757...12,240,199
JBrowse link
negative regulation of receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mtmr2 myotubularin related protein 2 ISO PMID:20410104 BHF-UCL PMID:20410104 RGD:8553482 NCBI chrNW_004955412:693,743...764,377
Ensembl chrNW_004955412:693,743...750,154
JBrowse link
negative regulation of RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrde2 NRDE-2, necessary for RNA interference, domain containing ISO (PMID:30842217) UniProt PMID:30842217 NCBI chrNW_004955438:12,726,206...12,780,364
Ensembl chrNW_004955438:12,726,357...12,780,379
JBrowse link
negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Styx serine/threonine/tyrosine interacting protein ISO (PMID:28007894) UniProtKB PMID:28007894 NCBI chrNW_004955409:10,428,556...10,445,384
Ensembl chrNW_004955409:10,428,556...10,445,880
JBrowse link
negative regulation of triglyceride catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoc3 apolipoprotein C3 ISO (PMID:18635818), (PMID:3973011) BHF-UCL PMID:3973011, PMID:18635818 NCBI chrNW_004955412:18,165,667...18,168,015
Ensembl chrNW_004955412:18,165,667...18,168,015
JBrowse link
G Gpld1 glycosylphosphatidylinositol specific phospholipase D1 ISO (MGI:MGI:3617276|PMID:16219662) UniProtKB PMID:16219662 MGI:MGI:3617276 NCBI chrNW_004955483:2,501,751...2,552,855
Ensembl chrNW_004955483:2,502,345...2,552,689
JBrowse link
G Pik3cg phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma ISO RGD PMID:21435395 RGD:6482711 NCBI chrNW_004955410:11,402,476...11,433,335
Ensembl chrNW_004955410:11,402,520...11,437,422
JBrowse link
G Plin5 perilipin 5 ISO (MGI:MGI:5476606|PMID:23345411), (MGI:MGI:5559662|PMID:22675471) UniProtKB PMID:22675471, PMID:23345411 MGI:MGI:5476606, MGI:MGI:5559662 NCBI chrNW_004955495:4,406,590...4,414,783
Ensembl chrNW_004955495:4,407,246...4,416,848
JBrowse link
G Sorl1 sortilin related receptor 1 ISO (MGI:MGI:5811185|PMID:27322061) UniProt PMID:27322061 MGI:MGI:5811185 NCBI chrNW_004955412:22,421,984...22,576,179
Ensembl chrNW_004955412:22,421,984...22,576,179
JBrowse link
negative regulation of ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anks1a ankyrin repeat and sterile alpha motif domain containing 1A ISO (MGI:MGI:4461099|PMID:20100865) MGI PMID:20100865 MGI:MGI:4461099 NCBI chrNW_004955437:2,916,598...3,070,771
Ensembl chrNW_004955437:2,916,598...3,070,771
JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 ISO (PMID:28031292) ARUK-UCL PMID:28031292 NCBI chrNW_004955597:326,601...397,112 JBrowse link
G Csnk2a2 casein kinase 2 alpha 2 ISO (PMID:28031292) ARUK-UCL PMID:28031292 NCBI chrNW_004955433:15,677,788...15,718,894
Ensembl chrNW_004955433:15,674,116...15,718,894
JBrowse link
G Hfe homeostatic iron regulator ISO (PMID:24904118) BHF-UCL PMID:24904118 NCBI chrNW_004955483:933,269...941,070
Ensembl chrNW_004955483:932,352...941,143
JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 ISO (PMID:21628596) FlyBase PMID:21628596 NCBI chrNW_004955494:3,365,826...3,554,735
Ensembl chrNW_004955494:3,393,049...3,554,844
JBrowse link
G Pdcl3 phosducin like 3 ISO (PMID:23792958) MGI PMID:23792958 NCBI chrNW_004955470:6,553,450...6,563,814 JBrowse link
G Pml PML nuclear body scaffold ISO (PMID:15195100) UniProtKB PMID:15195100 NCBI chrNW_004955450:3,654,854...3,692,057
Ensembl chrNW_004955450:3,656,498...3,692,406
JBrowse link
G Psen1 presenilin 1 ISO (MGI:MGI:4887523|PMID:20208556) BHF-UCL PMID:20208556 MGI:MGI:4887523 NCBI chrNW_004955523:2,128,529...2,210,737
Ensembl chrNW_004955523:2,128,529...2,210,737
JBrowse link
G Psen2 presenilin 2 ISO (MGI:MGI:4887523|PMID:20208556) BHF-UCL PMID:20208556 MGI:MGI:4887523 NCBI chrNW_004955406:5,727,367...5,748,798
Ensembl chrNW_004955406:5,727,367...5,752,234
JBrowse link
G Qrich2 glutamine rich 2 ISO (MGI:MGI:6277293|PMID:30683861)
(PMID:30683861)
UniProt PMID:30683861 MGI:MGI:6277293 NCBI chrNW_004955506:5,990,070...6,015,808 JBrowse link
G Rpl11 ribosomal protein L11 ISO (PMID:18560357) CAFA PMID:18560357 NCBI chrNW_004955452:3,626,609...3,630,911
Ensembl chrNW_004955452:3,626,609...3,633,209
JBrowse link
G Rpl23 ribosomal protein L23 ISO (PMID:15314173) CAFA PMID:15314173 NCBI chrNW_004955451:13,892,880...13,898,079
Ensembl chrNW_004955451:13,892,880...13,898,079
JBrowse link
G Rpl5 ribosomal protein L5 ISO (PMID:18560357) CAFA PMID:18560357 NCBI chrNW_004955423:1,748,809...1,758,622 JBrowse link
G Rps7 ribosomal protein S7 ISO (PMID:17310983) CAFA PMID:17310983 NCBI chrNW_004955487:3,793,168...3,798,007
Ensembl chrNW_004955487:3,792,870...3,798,153
JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat containing alpha ISO (PMID:23129660) UniProtKB PMID:23129660 NCBI chrNW_004955495:5,025,038...5,051,810
Ensembl chrNW_004955495:5,031,229...5,052,389
JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling ISO (MGI:MGI:4355593|PMID:19684112) MGI PMID:19684112 MGI:MGI:4355593 NCBI chrNW_004955485:7,805,244...7,925,414
Ensembl chrNW_004955485:7,808,131...7,925,677
JBrowse link
G Taf1 TATA-box binding protein associated factor 1 ISO (PMID:17237821) ParkinsonsUK-UCL PMID:17237821 NCBI chrNW_004955475:10,930,175...11,006,876 JBrowse link
G Wnt1 Wnt family member 1 ISO (MGI:MGI:3628833|PMID:16601693) MGI PMID:16601693 MGI:MGI:3628833 NCBI chrNW_004955500:7,797,063...7,811,142
Ensembl chrNW_004955500:7,797,060...7,811,167
JBrowse link
positive regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elavl4 ELAV like RNA binding protein 4 ISO (PMID:18218628) UniProt PMID:18218628 NCBI chrNW_004955464:8,699,142...8,847,289
Ensembl chrNW_004955464:8,699,088...8,788,878
JBrowse link
G Larp4b La ribonucleoprotein 4B ISO (PMID:26001795) FlyBase PMID:26001795 NCBI chrNW_004955492:113,900...197,753
Ensembl chrNW_004955492:138,374...193,145
JBrowse link
G Rbm24 RNA binding motif protein 24 ISO (PMID:24356969) UniProtKB PMID:24356969 NCBI chrNW_004955483:8,705,533...8,716,772
Ensembl chrNW_004955483:8,705,213...8,716,778
JBrowse link
G Tent4a terminal nucleotidyltransferase 4A ISO (PMID:30026317) UniProt PMID:30026317 NCBI chrNW_004955504:4,443,051...4,476,373
Ensembl chrNW_004955504:4,443,051...4,476,520
JBrowse link
G Tent4b terminal nucleotidyltransferase 4B ISO (PMID:30026317) UniProt PMID:30026317 NCBI chrNW_004955433:8,288,432...8,347,347
Ensembl chrNW_004955433:8,288,432...8,347,347
JBrowse link
RNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Naf1 nuclear assembly factor 1 ribonucleoprotein ISO (MGI:MGI:5816163|PMID:27510903) BHF-UCL PMID:27510903 MGI:MGI:5816163 NCBI chrNW_004955403:41,804,273...41,840,232
Ensembl chrNW_004955403:41,804,451...41,839,486
JBrowse link
G Tent2 terminal nucleotidyltransferase 2 ISO (PMID:23200856) UniProtKB PMID:23200856 NCBI chrNW_004955425:21,518,154...21,576,068
Ensembl chrNW_004955425:21,517,755...21,576,068
JBrowse link
suppression by virus of host autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg7 autophagy related 7 ISO (PMID:23290079) CACAO PMID:23290079 NCBI chrNW_004955429:14,076,976...14,301,034
Ensembl chrNW_004955429:14,076,960...14,304,236
JBrowse link
telomerase RNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx36 DEAH-box helicase 36 ISO (PMID:22238380) BHF-UCL PMID:22238380 NCBI chrNW_004955448:5,634,072...5,676,272
Ensembl chrNW_004955448:5,634,072...5,676,319
JBrowse link
G Dkc1 dyskerin pseudouridine synthase 1 ISO (PMID:25467444), (PMID:26950371) BHF-UCL PMID:25467444, PMID:26950371 NCBI chrNW_004955594:846,997...857,255
Ensembl chrNW_004955594:847,815...856,510
JBrowse link
G Naf1 nuclear assembly factor 1 ribonucleoprotein ISO (PMID:27510903) BHF-UCL PMID:27510903 NCBI chrNW_004955403:41,804,273...41,840,232
Ensembl chrNW_004955403:41,804,451...41,839,486
JBrowse link
G Parn poly(A)-specific ribonuclease ISO (PMID:26482878), (PMID:26950371) BHF-UCL PMID:26482878, PMID:26950371 NCBI chrNW_004955442:4,255,726...4,421,083
Ensembl chrNW_004955442:4,258,692...4,422,197
JBrowse link
tRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nsun2 NOP2/Sun RNA methyltransferase 2 ISO (MGI:MGI:6194005|PMID:22885326) UniProt PMID:22885326 MGI:MGI:6194005 NCBI chrNW_004955504:4,339,044...4,360,176
Ensembl chrNW_004955504:4,338,855...4,361,520
JBrowse link
G Trdmt1 tRNA aspartic acid methyltransferase 1 ISO (MGI:MGI:6194005|PMID:22885326) UniProt PMID:22885326 MGI:MGI:6194005 NCBI chrNW_004955429:10,741,512...10,774,268
Ensembl chrNW_004955429:10,742,097...10,771,877
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11889
    metabolic process 7609
      catabolic process 1642
        negative regulation of catabolic process 297
          negative regulation of anthocyanin catabolic process 0
          negative regulation of cellodextrin catabolic process 0
          negative regulation of cellooligosaccharide catabolic process 0
          negative regulation of cellotriose catabolic process 0
          negative regulation of cellular catabolic process + 233
          negative regulation of collagen catabolic process 1
          negative regulation of cyclodextrin catabolic process 0
          negative regulation of galactoglucomannan catabolic process 0
          negative regulation of galactomannan catabolic process 0
          negative regulation of glucomannan catabolic process 0
          negative regulation of glucose catabolic process to lactate via pyruvate 3
          negative regulation of glycolytic process + 16
          negative regulation of lipid catabolic process + 28
          negative regulation of pectin catabolic process 0
          negative regulation of pentose catabolic process to ethanol + 0
          negative regulation of protein catabolic process + 122
Path 2
Term Annotations click to browse term
  biological_process 11889
    biological regulation 8722
      regulation of biological process 8267
        regulation of metabolic process 5040
          negative regulation of metabolic process 2528
            negative regulation of catabolic process 297
              negative regulation of anthocyanin catabolic process 0
              negative regulation of cellodextrin catabolic process 0
              negative regulation of cellooligosaccharide catabolic process 0
              negative regulation of cellotriose catabolic process 0
              negative regulation of cellular catabolic process + 233
              negative regulation of collagen catabolic process 1
              negative regulation of cyclodextrin catabolic process 0
              negative regulation of galactoglucomannan catabolic process 0
              negative regulation of galactomannan catabolic process 0
              negative regulation of glucomannan catabolic process 0
              negative regulation of glucose catabolic process to lactate via pyruvate 3
              negative regulation of glycolytic process + 16
              negative regulation of lipid catabolic process + 28
              negative regulation of pectin catabolic process 0
              negative regulation of pentose catabolic process to ethanol + 0
              negative regulation of protein catabolic process + 122
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.