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ONTOLOGY REPORT - ANNOTATIONS


Term:negative regulation of catabolic process
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Accession:GO:0009895 term browser browse the term
Definition:Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of substances.
Synonyms:exact_synonym: down regulation of catabolic process;   downregulation of catabolic process;   negative regulation of breakdown;   negative regulation of catabolism;   negative regulation of degradation
 narrow_synonym: inhibition of catabolic process


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negative regulation of catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zdhhc7 zinc finger DHHC-type palmitoyltransferase 7 ISO (PMID:25301068) UniProt PMID:25301068 NCBI chrNW_004936641:3,175,338...3,199,487 JBrowse link
3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angel2 angel homolog 2 ISO (PMID:22547059) HGNC PMID:22547059 NCBI chrNW_004936557:605,609...621,421 JBrowse link
G Elavl1 ELAV like RNA binding protein 1 ISO (MGI:MGI:6105829|PMID:27616329)
(PMID:19029303)
(PMID:14517288), (PMID:26489465), (PMID:29180010)
UniProt
UniProtKB
PMID:14517288, PMID:19029303, PMID:26489465, PMID:27616329, PMID:29180010 MGI:MGI:6105829 NCBI chrNW_004936588:4,931,665...4,959,032 JBrowse link
G Elavl4 ELAV like RNA binding protein 4 ISO (PMID:12034726) UniProt PMID:12034726 NCBI chrNW_004936522:10,349,684...10,435,963 JBrowse link
G Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 ISO (MGI:MGI:5306322|PMID:12456657) UniProtKB PMID:12456657 MGI:MGI:5306322 NCBI chrNW_004936597:4,712,201...4,714,949 JBrowse link
G Hnrnpc heterogeneous nuclear ribonucleoprotein C ISO (PMID:16010978) UniProtKB PMID:16010978 NCBI chrNW_004936880:368,041...425,967 JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 ISO (PMID:14517288), (PMID:15014438), (PMID:20932473) UniProtKB PMID:14517288, PMID:15014438, PMID:20932473 NCBI chrNW_004936557:5,867,182...5,911,207 JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor ISO (PMID:15294994) BHF-UCL PMID:15294994 NCBI chrNW_004936473:27,672,237...27,676,339 JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 ISO RGD PMID:11696543 RGD:10045987 NCBI chrNW_004936588:316,348...326,895 JBrowse link
G Rbm10 RNA binding motif protein 10 ISO (MGI:MGI:4367529|PMID:19508861) MGI PMID:19508861 MGI:MGI:4367529 NCBI chrNW_004936502:12,923,890...12,952,179 JBrowse link
G Rbm38 RNA binding motif protein 38 ISO (PMID:17050675) UniProtKB PMID:17050675 NCBI chrNW_004936530:227,266...249,285 JBrowse link
G Tardbp TAR DNA binding protein ISO (PMID:17481916) BHF-UCL PMID:17481916 NCBI chrNW_004936474:90,813...103,713 JBrowse link
G Tirap TIR domain containing adaptor protein ISO (PMID:15294994) BHF-UCL PMID:15294994 NCBI chrNW_004936572:5,926,193...5,938,621 JBrowse link
G Zfp36 ZFP36 ring finger protein ISO (PMID:15014438) UniProtKB PMID:15014438 NCBI chrNW_004936661:2,251,148...2,253,527 JBrowse link
CRD-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx9 DExH-box helicase 9 ISO (PMID:19029303) UniProtKB PMID:19029303 NCBI chrNW_004936481:6,896,487...6,934,938 JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U ISO (PMID:19029303) UniProtKB PMID:19029303 NCBI chrNW_004936526:6,014,745...6,022,213 JBrowse link
G Igf2bp1 insulin like growth factor 2 mRNA binding protein 1 ISO (PMID:19029303) UniProtKB PMID:19029303 NCBI chrNW_004936490:12,430,343...12,468,794 JBrowse link
G Syncrip synaptotagmin binding cytoplasmic RNA interacting protein ISO (PMID:19029303) UniProtKB PMID:19029303 NCBI chrNW_004936510:5,643,072...5,672,258 JBrowse link
G Ybx1 Y-box binding protein 1 ISO (PMID:19029303) UniProtKB PMID:19029303 NCBI chrNW_004936474:24,026,459...24,047,724 JBrowse link
mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axin2 axin 2 ISO (PMID:17072303) BHF-UCL PMID:17072303 NCBI chrNW_004936541:7,155,963...7,242,466 JBrowse link
G Cirbp cold inducible RNA binding protein ISO (PMID:11574538) UniProtKB PMID:11574538 NCBI chrNW_004936588:636,041...639,564 JBrowse link
G Dicer1 dicer 1, ribonuclease III ISO (MGI:MGI:5439239|PMID:22844247) MGI PMID:22844247 MGI:MGI:5439239 NCBI chrNW_004936846:528,768...584,599 JBrowse link
G E2f1 E2F transcription factor 1 ISO (PMID:15766563) BHF-UCL PMID:15766563 NCBI chrNW_004936561:6,894,827...6,901,058 JBrowse link
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 ISO (PMID:24335285), (PMID:32354837) UniProt PMID:24335285, PMID:32354837 NCBI chrNW_004936755:586,366...635,294 JBrowse link
G Elavl1 ELAV like RNA binding protein 1 ISO (PMID:21613615), (PMID:31358969)
(MGI:MGI:5922838|PMID:27609837)
(MGI:MGI:3037407|PMID:14976220), (MGI:MGI:5287957|PMID:21613615), (MGI:MGI:5559905|PMID:24394384)
(PMID:19029303)
MGI
CACAO
UniProtKB
PMID:14976220, PMID:19029303, PMID:21613615, PMID:24394384, PMID:27609837, PMID:31358969 MGI:MGI:3037407, MGI:MGI:5287957, MGI:MGI:5559905, MGI:MGI:5922838 NCBI chrNW_004936588:4,931,665...4,959,032 JBrowse link
G Fus FUS RNA binding protein ISO (PMID:27378374) MGI PMID:27378374 NCBI chrNW_004936501:13,529,732...13,541,102 JBrowse link
G Gdnf glial cell derived neurotrophic factor ISO (PMID:12358785) BHF-UCL PMID:12358785 NCBI chrNW_004936518:4,291,391...4,310,752 JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D ISO RGD PMID:15192077 RGD:1357938 NCBI chrNW_004936738:2,096,370...2,115,135 JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U ISO (PMID:17174306) UniProtKB PMID:17174306 NCBI chrNW_004936526:6,014,745...6,022,213 JBrowse link
G Larp1 La ribonucleoprotein 1, translational regulator ISO (PMID:25940091), (PMID:28673543) UniProt PMID:25940091, PMID:28673543 NCBI chrNW_004936515:8,039,887...8,125,006 JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 ISO (MGI:MGI:2158083|PMID:11741878) MGI PMID:11741878 MGI:MGI:2158083 NCBI chrNW_004936557:5,867,182...5,911,207 JBrowse link
G Meioc meiosis specific with coiled-coil domain ISO (MGI:MGI:5770021|PMID:26742488) UniProtKB PMID:26742488 MGI:MGI:5770021 NCBI chrNW_004936541:1,064,702...1,066,742 JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO RGD PMID:21073857 RGD:10040969 NCBI chrNW_004936474:158,376...282,310 JBrowse link
G Noct nocturnin ISO (MGI:MGI:5308514|PMID:22073225) UniProtKB PMID:22073225 MGI:MGI:5308514 NCBI chrNW_004936535:8,504,518...8,509,376 JBrowse link
G Qki QKI, KH domain containing RNA binding ISO RGD PMID:16855020 RGD:10045995 NCBI chrNW_004936489:13,901,066...14,000,652 JBrowse link
G Rbm24 RNA binding motif protein 24 ISO (PMID:29104163) UniProtKB PMID:29104163 NCBI chrNW_004936552:3,291,727...3,304,332 JBrowse link
G Rbm46 RNA binding motif protein 46 ISO (MGI:MGI:5644240|PMID:25397698) MGI PMID:25397698 MGI:MGI:5644240 NCBI chrNW_004936576:1,532,036...1,574,858 JBrowse link
G Slc11a1 solute carrier family 11 member 1 ISO (MGI:MGI:85148|PMID:9009318) MGI PMID:9009318 MGI:MGI:85148 NCBI chrNW_004936569:888,309...895,991 JBrowse link
G Taf15 TATA-box binding protein associated factor 15 ISO (PMID:27378374) MGI PMID:27378374 NCBI chrNW_004936490:199,226...230,190 JBrowse link
G Tent5c terminal nucleotidyltransferase 5C ISO (MGI:MGI:5926094|PMID:28931820)
(PMID:28931820)
UniProtKB PMID:28931820 MGI:MGI:5926094 NCBI chrNW_004936627:2,709,633...2,728,568 JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 ISO (PMID:18794151) UniProtKB PMID:18794151 NCBI chrNW_004936474:18,691,872...18,749,217 JBrowse link
G Vegfa vascular endothelial growth factor A ISO RGD PMID:12881220 RGD:1580563 NCBI chrNW_004936476:16,245,134...16,261,180 JBrowse link
G Ybx1 Y-box binding protein 1 ISO (PMID:31358969) UniProt PMID:31358969 NCBI chrNW_004936474:24,026,459...24,047,724 JBrowse link
G Ybx2 Y-box binding protein 2 ISO (MGI:MGI:3696301|PMID:17035640) MGI PMID:17035640 MGI:MGI:3696301 NCBI chrNW_004936595:574,264...579,959 JBrowse link
negative regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mettl16 methyltransferase like 16 ISO (PMID:28525753) UniProt PMID:28525753 NCBI chrNW_004936538:8,470,057...8,541,620 JBrowse link
negative regulation of apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dffa DNA fragmentation factor subunit alpha ISO (PMID:15572351)
(MGI:MGI:2182584|PMID:10601318), (MGI:MGI:3029597|PMID:14663139)
MGI PMID:10601318, PMID:14663139, PMID:15572351 MGI:MGI:2182584, MGI:MGI:3029597 NCBI chrNW_004936623:4,296,995...4,307,069 JBrowse link
G Nmnat1 nicotinamide nucleotide adenylyltransferase 1 ISO RGD PMID:27184051 RGD:13781945 NCBI chrNW_004936623:3,862,234...3,891,849 JBrowse link
G Pam16 presequence translocase associated motor 16 ISO RGD PMID:24069394 RGD:13462066 NCBI chrNW_004936694:153,958...161,635 JBrowse link
negative regulation of arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 ISO (PMID:19278978) BHF-UCL PMID:19278978 NCBI chrNW_004936567:944,825...1,039,920 JBrowse link
negative regulation of autophagosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Becn1 beclin 1 ISO (MGI:MGI:5888970|PMID:27994061) MGI PMID:27994061 MGI:MGI:5888970 NCBI chrNW_004936490:17,518,100...17,531,126 JBrowse link
G Chmp4a charged multivesicular body protein 4A ISO (PMID:21975012) UniProtKB PMID:21975012 NCBI chrNW_004936722:341,066...344,928 JBrowse link
G Chmp4b charged multivesicular body protein 4B ISO (PMID:21975012) UniProtKB PMID:21975012 NCBI chrNW_004936561:6,756,360...6,798,964 JBrowse link
G Ehmt2 euchromatic histone lysine methyltransferase 2 ISO (MGI:MGI:5543871|PMID:23918802) MGI PMID:23918802 MGI:MGI:5543871 NCBI chrNW_004936727:1,648,451...1,663,294 JBrowse link
G Fez1 fasciculation and elongation protein zeta 1 ISO (PMID:25495476) GO_Central PMID:25495476 NCBI chrNW_004936743:1,871,808...1,917,370 JBrowse link
G Fez2 fasciculation and elongation protein zeta 2 ISO (PMID:25495476) GO_Central PMID:25495476 NCBI chrNW_004936663:1,576,311...1,637,363 JBrowse link
G Lrrk2 leucine rich repeat kinase 2 ISO (PMID:23916833) ParkinsonsUK-UCL PMID:23916833 NCBI chrNW_004936607:628,469...761,117 JBrowse link
G Mtm1 myotubularin 1 ISO (MGI:MGI:5510937|PMID:23695157) MGI PMID:23695157 MGI:MGI:5510937 NCBI chrNW_004936714:1,792,893...1,870,338 JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator ISO (PMID:20181828) UniProt PMID:20181828 NCBI chrNW_004936501:11,998,064...11,999,431 JBrowse link
G Phf23 PHD finger protein 23 ISO (PMID:25484098) GO_Central PMID:25484098 NCBI chrNW_004936595:528,832...533,212 JBrowse link
G Pink1 PTEN induced kinase 1 ISO (PMID:19279012) ParkinsonsUK-UCL PMID:19279012 NCBI chrNW_004936474:6,574,471...6,589,478 JBrowse link
G Scfd1 sec1 family domain containing 1 ISO (PMID:21242315) UniProtKB PMID:21242315 NCBI chrNW_004936494:5,410,219...5,501,687 JBrowse link
G Sec22b SEC22 homolog B, vesicle trafficking protein ISO (PMID:21242315) UniProtKB PMID:21242315 NCBI chrNW_004936872:294,116...313,893 JBrowse link
G Smcr8 SMCR8-C9orf72 complex subunit ISO (PMID:28195531) HGNC PMID:28195531 NCBI chrNW_004936741:1,838,974...1,848,742 JBrowse link
G Tmem39a transmembrane protein 39A ISO (PMID:31806350) UniProt PMID:31806350 NCBI chrNW_004936536:6,376,539...6,406,314 JBrowse link
negative regulation of autophagosome maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec16a C-type lectin domain containing 16A ISO (PMID:28223137) UniProtKB PMID:28223137 NCBI chrNW_004936530:9,089,478...9,264,563 JBrowse link
G Phf23 PHD finger protein 23 ISO (PMID:25484098) GO_Central PMID:25484098 NCBI chrNW_004936595:528,832...533,212 JBrowse link
G Rubcn rubicon autophagy regulator ISO (PMID:21062745) UniProtKB PMID:21062745 NCBI chrNW_004936784:370,173...438,263 JBrowse link
G Tmem39a transmembrane protein 39A ISO (PMID:31806350) UniProt PMID:31806350 NCBI chrNW_004936536:6,376,539...6,406,314 JBrowse link
G Ubqln4 ubiquilin 4 ISO (PMID:23459205) UniProtKB PMID:23459205 NCBI chrNW_004936580:5,299,864...5,316,583 JBrowse link
negative regulation of autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1a adrenoceptor alpha 1A ISO (MGI:MGI:5888970|PMID:27994061) MGI PMID:27994061 MGI:MGI:5888970 NCBI chrNW_004936757:149,366...237,710 JBrowse link
G Akt1 AKT serine/threonine kinase 1 ISO (PMID:18387192) BHF-UCL PMID:18387192 NCBI chrNW_004936621:620,163...639,115 JBrowse link
G Bcl2 BCL2 apoptosis regulator ISO (MGI:MGI:3796473|PMID:18281291) ParkinsonsUK-UCL PMID:18281291 MGI:MGI:3796473 NCBI chrNW_004936497:2,209,136...2,373,580 JBrowse link
G Becn1 beclin 1 ISO (MGI:MGI:5888970|PMID:27994061) MGI PMID:27994061 MGI:MGI:5888970 NCBI chrNW_004936490:17,518,100...17,531,126 JBrowse link
G Bmf Bcl2 modifying factor ISO (PMID:23629966)
(MGI:MGI:5490676|PMID:23629966)
CAFA PMID:23629966 MGI:MGI:5490676 NCBI chrNW_004936471:3,573,437...3,594,438 JBrowse link
G Cptp ceramide-1-phosphate transfer protein ISO (PMID:29164996) UniProtKB PMID:29164996 NCBI chrNW_004936737:1,816,461...1,820,353 JBrowse link
G Eif4e eukaryotic translation initiation factor 4E NOT ISO (PMID:18426977) ParkinsonsUK-UCL PMID:18426977 NCBI chrNW_004936520:3,922,457...3,964,721 JBrowse link
G Eif4g1 eukaryotic translation initiation factor 4 gamma 1 ISO (PMID:18426977) ParkinsonsUK-UCL PMID:18426977 NCBI chrNW_004936578:5,548,526...5,567,220 JBrowse link
G Eif4g2 eukaryotic translation initiation factor 4 gamma 2 ISO (PMID:18426977) ParkinsonsUK-UCL PMID:18426977 NCBI chrNW_004936528:7,563,965...7,574,630 JBrowse link
G Eif4g3 eukaryotic translation initiation factor 4 gamma 3 NOT ISO (PMID:18426977) ParkinsonsUK-UCL PMID:18426977 NCBI chrNW_004936474:6,718,719...7,004,066 JBrowse link
G Foxk1 forkhead box K1 ISO (PMID:25402684) UniProt PMID:25402684 NCBI chrNW_004936765:1,126,168...1,255,354 JBrowse link
G Foxk2 forkhead box K2 ISO (MGI:MGI:5615527|PMID:25402684) UniProt PMID:25402684 MGI:MGI:5615527 NCBI chrNW_004936923:109,973...166,952 JBrowse link
G Gata4 GATA binding protein 4 ISO RGD PMID:19901028 RGD:5131537 NCBI chrNW_004936675:3,408,549...3,420,828 JBrowse link
G Golga2 golgin A2 ISO (PMID:22735382) ParkinsonsUK-UCL PMID:22735382 NCBI chrNW_004936487:15,798,623...15,814,360 JBrowse link
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 ISO (MGI:MGI:4461108|PMID:20041218) MGI PMID:20041218 MGI:MGI:4461108 NCBI chrNW_004936471:24,142,227...24,330,966 JBrowse link
G Htr2b 5-hydroxytryptamine receptor 2B ISO (PMID:20099302) UniProtKB PMID:20099302 NCBI chrNW_004936525:5,711,894...5,729,074 JBrowse link
G Il10 interleukin 10 ISO (PMID:26962683) UniProt PMID:26962683 NCBI chrNW_004936557:5,834,874...5,838,502 JBrowse link
G Il10ra interleukin 10 receptor subunit alpha ISO (PMID:26962683) UniProt PMID:26962683 NCBI chrNW_004936542:3,099,484...3,113,159 JBrowse link
G Il3 interleukin 3 ISO (MGI:MGI:3575206|PMID:15680329) MGI PMID:15680329 MGI:MGI:3575206 NCBI chrNW_004936647:3,102,922...3,104,758 JBrowse link
G Kdm4a lysine demethylase 4A ISO (PMID:25660547) ParkinsonsUK-UCL PMID:25660547 NCBI chrNW_004936474:25,002,527...25,056,642 JBrowse link
G Kif25 kinesin family member 25 ISO (PMID:22354037) BHF-UCL PMID:22354037 NCBI chrNW_004936489:16,834,102...16,867,902 JBrowse link
G Klhl22 kelch like family member 22 ISO (PMID:29769719) UniProtKB PMID:29769719 NCBI chrNW_004936619:2,854,915...2,899,386 JBrowse link
G Lep leptin ISO (PMID:25060689)
(MGI:MGI:5705211|PMID:25060689)
UniProtKB PMID:25060689 MGI:MGI:5705211 NCBI chrNW_004936479:15,394,966...15,411,334 JBrowse link
G Lepr leptin receptor ISO (PMID:25060689) UniProtKB PMID:25060689 NCBI chrNW_004936591:5,771,371...5,846,177 JBrowse link
G Mcl1 MCL1 apoptosis regulator, BCL2 family member ISO (PMID:24113155) UniProtKB PMID:24113155 NCBI chrNW_004936580:803,452...806,966 JBrowse link
G Mt3 metallothionein 3 ISO (MGI:MGI:4881636|PMID:20544854) UniProtKB PMID:20544854 MGI:MGI:4881636 NCBI chrNW_004936475:8,864,512...8,866,516 JBrowse link
G Mtmr8 myotubularin related protein 8 ISO (PMID:22647598) UniProtKB PMID:22647598 NCBI chrNW_004936635:3,336,218...3,415,998 JBrowse link
G Mtmr9 myotubularin related protein 9 ISO (PMID:22647598) UniProtKB PMID:22647598 NCBI chrNW_004936675:3,035,221...3,080,419 JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO (PMID:22424946)
(MGI:MGI:5285135|PMID:21258367)
(PMID:22576015), (PMID:30704899)
CAFA
UniProtKB
UniProt
RGD
PMID:21258367, PMID:22424946, PMID:22576015, PMID:24725502, PMID:30704899 MGI:MGI:5285135, RGD:10040964 NCBI chrNW_004936474:158,376...282,310 JBrowse link
G Nampt nicotinamide phosphoribosyltransferase ISO RGD PMID:26601421 RGD:13781888 NCBI chrNW_004936479:17,682,070...17,716,713 JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator ISO PMID:20181828
(MGI:MGI:6283395|PMID:20181828)
(PMID:20181828)
UniProt PMID:20181828 MGI:MGI:6283395, RGD:14390062 NCBI chrNW_004936501:11,998,064...11,999,431 JBrowse link
G Ptk2 protein tyrosine kinase 2 ISO (MGI:MGI:5888970|PMID:27994061) MGI PMID:27994061 MGI:MGI:5888970 NCBI chrNW_004936470:10,379,855...10,578,531 JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 ISO (PMID:23991106) UniProtKB PMID:23991106 NCBI chrNW_004936690:2,180,804...2,232,869 JBrowse link
G Rasip1 Ras interacting protein 1 ISO (PMID:22354037) BHF-UCL PMID:22354037 NCBI chrNW_004936664:2,743,568...2,754,618 JBrowse link
G Rnf5 ring finger protein 5 ISO (MGI:MGI:5469257|PMID:23093945) MGI PMID:23093945 MGI:MGI:5469257 NCBI chrNW_004936727:1,422,207...1,424,808 JBrowse link
G Rraga Ras related GTP binding A ISO (PMID:25936802) UniProtKB PMID:25936802 NCBI chrNW_004936652:991,832...993,439 JBrowse link
G Rubcn rubicon autophagy regulator ISO (PMID:19270696) UniProtKB PMID:19270696 NCBI chrNW_004936784:370,173...438,263 JBrowse link
G Sirt2 sirtuin 2 ISO (PMID:20543840) UniProtKB PMID:20543840 NCBI chrNW_004936661:1,828,868...1,849,892 JBrowse link
G Stat3 signal transducer and activator of transcription 3 ISO (PMID:26962683) UniProt PMID:26962683 NCBI chrNW_004936490:17,119,189...17,178,402 JBrowse link
G Tbc1d14 TBC1 domain family member 14 ISO (PMID:22613832) BHF-UCL PMID:22613832 NCBI chrNW_004936477:18,761,034...18,864,578 JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 ISO (MGI:MGI:5906931|PMID:28802038) ARUK-UCL PMID:28802038 MGI:MGI:5906931 NCBI chrNW_004936476:18,659,725...18,665,406 JBrowse link
G Washc1 WASH complex subunit 1 ISO (MGI:MGI:5519172|PMID:23974797) UniProtKB PMID:23974797 MGI:MGI:5519172 NCBI chrNW_004936606:209,289...228,986 JBrowse link
G Wdr6 WD repeat domain 6 ISO (PMID:22354037) BHF-UCL PMID:22354037 NCBI chrNW_004936529:731,958...741,334 JBrowse link
negative regulation of autophagy of mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pink1 PTEN induced kinase 1 ISO (PMID:19279012) ParkinsonsUK-UCL PMID:19279012 NCBI chrNW_004936474:6,574,471...6,589,478 JBrowse link
G Tspo translocator protein ISO (PMID:25470454)
(MGI:MGI:5689082|PMID:25470454)
ParkinsonsUK-UCL PMID:25470454 MGI:MGI:5689082 NCBI chrNW_004936718:992,301...995,172 JBrowse link
negative regulation of cellular protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atraid all-trans retinoic acid induced differentiation factor ISO (PMID:21723284) UniProtKB PMID:21723284 NCBI chrNW_004936493:5,333,151...5,338,157 JBrowse link
G Cdk2 cyclin dependent kinase 2 ISO (PMID:15750306) AgBase PMID:15750306 NCBI chrNW_004936646:379,849...385,648 JBrowse link
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 ISO (PMID:16173922) UniProtKB PMID:16173922 NCBI chrNW_004936490:13,345,443...13,355,841 JBrowse link
G Dab2ip DAB2 interacting protein ISO (PMID:19903888) UniProtKB PMID:19903888 NCBI chrNW_004936487:10,056,809...10,243,021 JBrowse link
G F13b coagulation factor XIII B chain ISO (MGI:MGI:5645809|PMID:18224415) MGI PMID:18224415 MGI:MGI:5645809 NCBI chrNW_004936567:6,712,666...6,735,539 JBrowse link
G Nell1 neural EGFL like 1 ISO (PMID:21723284) UniProtKB PMID:21723284 NCBI chrNW_004936654:1,591,016...2,392,496 JBrowse link
G Rgp1 RGP1 homolog, RAB6A GEF complex partner 1 ISO (PMID:23091056) UniProtKB PMID:23091056 NCBI chrNW_004936524:3,742,590...3,746,371 JBrowse link
G Ric1 RIC1 homolog, RAB6A GEF complex partner 1 ISO (PMID:23091056) UniProtKB PMID:23091056 NCBI chrNW_004936539:290,429...404,928 JBrowse link
negative regulation of chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsa cathepsin A ISO (MGI:MGI:5700310|PMID:12505983)
(PMID:12505983)
ParkinsonsUK-UCL PMID:12505983 MGI:MGI:5700310 NCBI chrNW_004936514:7,131,263...7,136,775 JBrowse link
G Snca synuclein alpha ISO (PMID:20697033) ParkinsonsUK-UCL PMID:20697033 NCBI chrNW_004936685:2,077,017...2,175,298 JBrowse link
negative regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 ISO (PMID:32354837) UniProt PMID:32354837 NCBI chrNW_004936755:586,366...635,294 JBrowse link
negative regulation of DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rgn regucalcin ISO RGD PMID:2001740 RGD:9590215 NCBI chrNW_004936502:12,872,938...12,891,270 JBrowse link
negative regulation of ER-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sgta small glutamine rich tetratricopeptide repeat containing alpha ISO (PMID:23129660) UniProtKB PMID:23129660 NCBI chrNW_004936588:1,599,453...1,616,480 JBrowse link
G Svip small VCP interacting protein ISO (PMID:17872946) UniProtKB PMID:17872946 NCBI chrNW_004936654:3,452,781...3,459,161 JBrowse link
G Usp14 ubiquitin specific peptidase 14 ISO (PMID:19135427) ParkinsonsUK-UCL PMID:19135427 NCBI chrNW_004936550:640,331...675,703 JBrowse link
negative regulation of ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp11 aquaporin 11 ISO (MGI:MGI:3813160|PMID:18606867) UniProt PMID:18606867 MGI:MGI:3813160 NCBI chrNW_004936498:6,213,583...6,237,273 JBrowse link
G Ubxn1 UBX domain protein 1 ISO (PMID:21135095) ParkinsonsUK-UCL PMID:21135095 NCBI chrNW_004936581:584,519...587,863 JBrowse link
G Usp25 ubiquitin specific peptidase 25 ISO (PMID:22590560) ParkinsonsUK-UCL PMID:22590560 NCBI chrNW_004936505:8,613,588...8,683,560 JBrowse link
negative regulation of fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acacb acetyl-CoA carboxylase beta ISO (MGI:MGI:3530688|PMID:15677334), (MGI:MGI:3629477|PMID:12920182) UniProtKB PMID:12920182, PMID:15677334 MGI:MGI:3530688, MGI:MGI:3629477 NCBI chrNW_004936769:950,970...1,053,671 JBrowse link
G Akt1 AKT serine/threonine kinase 1 ISO (PMID:16814735) BHF-UCL PMID:16814735 NCBI chrNW_004936621:620,163...639,115 JBrowse link
G Cnr1 cannabinoid receptor 1 ISO RGD PMID:19724020 RGD:2314644 NCBI chrNW_004936510:3,779,930...3,806,615 JBrowse link
G Dbi diazepam binding inhibitor, acyl-CoA binding protein ISO RGD PMID:11485163 RGD:2316274 NCBI chrNW_004936469:50,981,198...50,986,224 JBrowse link
G Mfsd2a major facilitator superfamily domain containing 2A ISO (MGI:MGI:5474727|PMID:23209793) ARUK-UCL PMID:23209793 MGI:MGI:5474727 NCBI chrNW_004936474:21,790,807...21,803,336 JBrowse link
G Plin5 perilipin 5 ISO (MGI:MGI:5440401|PMID:22532565)
(MGI:MGI:5559662|PMID:22675471), (MGI:MGI:5559666|PMID:21885430)
UniProtKB PMID:21885430, PMID:22532565, PMID:22675471 MGI:MGI:5440401, MGI:MGI:5559662, MGI:MGI:5559666 NCBI chrNW_004936588:2,629,762...2,637,303 JBrowse link
negative regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Etfbkmt electron transfer flavoprotein subunit beta lysine methyltransferase ISO (PMID:25416781)
(MGI:MGI:5700285|PMID:25023281)
UniProtKB PMID:25023281, PMID:25416781 MGI:MGI:5700285 NCBI chrNW_004936607:4,533,607...4,541,230 JBrowse link
negative regulation of glucose catabolic process to lactate via pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc25a12 solute carrier family 25 member 12 ISO RGD PMID:19764902 RGD:13628741 NCBI chrNW_004936509:1,994,082...2,077,731 JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase ISO (MGI:MGI:4867601|PMID:20935145) MGI PMID:20935145 MGI:MGI:4867601 NCBI chrNW_004936606:4,518,525...4,540,109 JBrowse link
G Tp53 tumor protein p53 ISO (MGI:MGI:4867601|PMID:20935145) MGI PMID:20935145 MGI:MGI:4867601 NCBI chrNW_004936595:919,807...935,367 JBrowse link
negative regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1b adrenoceptor alpha 1B ISO (MGI:MGI:3027459|PMID:14581480) MGI PMID:14581480 MGI:MGI:3027459 NCBI chrNW_004936515:3,523,799...3,572,467 JBrowse link
G Ins insulin ISO (PMID:381941) BHF-UCL PMID:381941 NCBI chrNW_004936816:1,002,137...1,003,357 JBrowse link
negative regulation of glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 ISO (MGI:MGI:3759354|PMID:17828264) UniProtKB PMID:17828264 MGI:MGI:3759354 NCBI chrNW_004936599:3,033,854...3,046,364 JBrowse link
G Cbfa2t3 CBFA2/RUNX1 partner transcriptional co-repressor 3 ISO (PMID:23840896) UniProtKB PMID:23840896 NCBI chrNW_004936641:857,483...875,527 JBrowse link
G Ddit4 DNA damage inducible transcript 4 ISO (MGI:MGI:4440406|PMID:20176937) MGI PMID:20176937 MGI:MGI:4440406 NCBI chrNW_004936521:6,646,864...6,648,982 JBrowse link
G Fbp1 fructose-bisphosphatase 1 ISO (PMID:25043030)
(PMID:19881551)
CAFA
UniProtKB
PMID:19881551, PMID:25043030 NCBI chrNW_004936626:3,555,835...3,581,651 JBrowse link
G Hdac4 histone deacetylase 4 ISO (MGI:MGI:4365327|PMID:19109424) BHF-UCL PMID:19109424 MGI:MGI:4365327 NCBI chrNW_004936745:1,730,743...1,942,071 JBrowse link
G Ier3 immediate early response 3 ISO (MGI:MGI:4437986|PMID:19096392) MGI PMID:19096392 MGI:MGI:4437986 NCBI chrNW_004936837:401,475...402,769 JBrowse link
G Mtch2 mitochondrial carrier 2 ISO (MGI:MGI:5662300|PMID:26219591) MGI PMID:26219591 MGI:MGI:5662300 NCBI chrNW_004936562:1,622,341...1,644,191 JBrowse link
G Myog myogenin ISO RGD PMID:10225962 RGD:9686132 NCBI chrNW_004936567:1,507,042...1,509,814 JBrowse link
G Ncor1 nuclear receptor corepressor 1 ISO (PMID:19955185) BHF-UCL PMID:19955185 NCBI chrNW_004936821:382,756...538,254 JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator ISO (PMID:30451898) UniProt PMID:30451898 NCBI chrNW_004936501:11,998,064...11,999,431 JBrowse link
G Ppara peroxisome proliferator activated receptor alpha ISO (PMID:19955185) BHF-UCL PMID:19955185 NCBI chrNW_004936629:3,672,445...3,725,645 JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO RGD PMID:22343369 RGD:7242186 NCBI chrNW_004936477:4,881,230...5,488,208 JBrowse link
G Sirt6 sirtuin 6 ISO (MGI:MGI:4881401|PMID:20141841), (MGI:MGI:5619441|PMID:23217706) CACAO PMID:20141841, PMID:23217706 MGI:MGI:4881401, MGI:MGI:5619441 NCBI chrNW_004936588:2,387,162...2,394,066 JBrowse link
G Stat3 signal transducer and activator of transcription 3 ISO (MGI:MGI:5441121|PMID:22891351) MGI PMID:22891351 MGI:MGI:5441121 NCBI chrNW_004936490:17,119,189...17,178,402 JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase ISO (MGI:MGI:4867601|PMID:20935145) MGI PMID:20935145 MGI:MGI:4867601 NCBI chrNW_004936606:4,518,525...4,540,109 JBrowse link
negative regulation of glycolytic process through fructose-6-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) ISO (MGI:MGI:3820439|PMID:18698006) MGI PMID:18698006 MGI:MGI:3820439 NCBI chrNW_004936541:718,577...727,420 JBrowse link
negative regulation of hydrogen peroxide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101976500 haptoglobin ISO (PMID:19740759) BHF-UCL PMID:19740759 NCBI chrNW_004936475:21,841,054...21,845,821 JBrowse link
G Mt3 metallothionein 3 ISO RGD PMID:12058024 RGD:625483 NCBI chrNW_004936475:8,864,512...8,866,516 JBrowse link
negative regulation of lipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acacb acetyl-CoA carboxylase beta ISO (MGI:MGI:3530688|PMID:15677334) UniProtKB PMID:15677334 MGI:MGI:3530688 NCBI chrNW_004936769:950,970...1,053,671 JBrowse link
G Adora1 adenosine A1 receptor ISO RGD PMID:15220221 RGD:1625243 NCBI chrNW_004936567:1,430,128...1,508,626 JBrowse link
G Adra2a adrenoceptor alpha 2A ISO (PMID:10948198) BHF-UCL PMID:10948198 NCBI chrNW_004936486:1,837,785...1,841,019 JBrowse link
G Alk ALK receptor tyrosine kinase ISO (MGI:MGI:6442464|PMID:32442405) UniProt PMID:32442405 MGI:MGI:6442464 NCBI chrNW_004936493:3,624,288...3,671,567 JBrowse link
G Apoa2 apolipoprotein A2 ISO (PMID:14967812) BHF-UCL PMID:14967812 NCBI chrNW_004936903:520,420...521,726 JBrowse link
G Apoc1 apolipoprotein C1 ISO (PMID:15576844) BHF-UCL PMID:15576844 NCBI chrNW_004936706:1,519,248...1,520,102 JBrowse link
G Apoc3 apolipoprotein C3 ISO (PMID:15576844) BHF-UCL PMID:15576844 NCBI chrNW_004936542:2,106,927...2,108,412 JBrowse link
G Bscl2 BSCL2 lipid droplet biogenesis associated, seipin ISO (MGI:MGI:5319118|PMID:22269949) UniProtKB PMID:22269949 MGI:MGI:5319118 NCBI chrNW_004936581:567,426...576,859 JBrowse link
G Cidea cell death inducing DFFA like effector a ISO (MGI:MGI:2673116|PMID:12910269)
(PMID:15919794)
BHF-UCL PMID:12910269, PMID:15919794 MGI:MGI:2673116 NCBI chrNW_004936626:230,372...246,893 JBrowse link
G Crtc3 CREB regulated transcription coactivator 3 ISO (MGI:MGI:4867567|PMID:21164481) MGI PMID:21164481 MGI:MGI:4867567 NCBI chrNW_004936483:16,356,663...16,465,128 JBrowse link
G Hcar1 hydroxycarboxylic acid receptor 1 ISO (MGI:MGI:3839706|PMID:19047060) MGI PMID:19047060 MGI:MGI:3839706 NCBI chrNW_004936558:1,890,027...1,893,632 JBrowse link
G Hcar2 hydroxycarboxylic acid receptor 2 ISO PMID:19141678 UniProt PMID:19141678 RGD:8553927 NCBI chrNW_004936558:1,899,313...1,901,409 JBrowse link
G Il1b interleukin 1 beta ISO (PMID:19032770) BHF-UCL PMID:19032770 NCBI chrNW_004936783:1,251,678...1,256,807 JBrowse link
G Ins insulin ISO (PMID:24675707) AgBase PMID:24675707 NCBI chrNW_004936816:1,002,137...1,003,357 JBrowse link
G Pde3b phosphodiesterase 3B ISO (PMID:11641262) BHF-UCL PMID:11641262 NCBI chrNW_004936528:3,922,436...4,087,991 JBrowse link
G Plin1 perilipin 1 ISO (PMID:21701568) AgBase PMID:21701568 NCBI chrNW_004936483:15,457,299...15,470,674 JBrowse link
G Plin5 perilipin 5 ISO (MGI:MGI:5559666|PMID:21885430) UniProtKB PMID:21885430 MGI:MGI:5559666 NCBI chrNW_004936588:2,629,762...2,637,303 JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 ISO (MGI:MGI:5284794|PMID:15878856) UniProtKB PMID:15878856 MGI:MGI:5284794 NCBI chrNW_004936518:1,817,051...1,843,376 JBrowse link
G Tnf tumor necrosis factor ISO (PMID:19032770) BHF-UCL PMID:19032770 NCBI chrNW_004936727:1,936,066...1,937,766 JBrowse link
negative regulation of low-density lipoprotein particle receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 ISO (PMID:22848640)
(MGI:MGI:5446858|PMID:22848640)
BHF-UCL PMID:22848640 MGI:MGI:5446858 NCBI chrNW_004936471:21,274,112...21,329,286 JBrowse link
G Furin furin, paired basic amino acid cleaving enzyme ISO (PMID:16912035) HGNC PMID:16912035 NCBI chrNW_004936483:16,136,099...16,147,945 JBrowse link
negative regulation of lysosomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Laptm4b lysosomal protein transmembrane 4 beta ISO (PMID:25588945) UniProtKB PMID:25588945 NCBI chrNW_004936470:44,917,462...44,981,773 JBrowse link
G Mgat3 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase ISO (MGI:MGI:5751042|PMID:25592972), (MGI:MGI:5816436|PMID:26467158) MGI PMID:25592972, PMID:26467158 MGI:MGI:5751042, MGI:MGI:5816436 NCBI chrNW_004936492:2,144,775...2,149,344 JBrowse link
G Vps35 VPS35 retromer complex component ISO (MGI:MGI:5694519|PMID:26203154) ParkinsonsUK-UCL PMID:26203154 MGI:MGI:5694519 NCBI chrNW_004936475:50,476...77,797 JBrowse link
negative regulation of macroautophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmox1 heme oxygenase 1 ISO (MGI:MGI:5430482|PMID:20705711) MGI PMID:20705711 MGI:MGI:5430482 NCBI chrNW_004936492:5,042,353...5,049,216 JBrowse link
G Lrrk2 leucine rich repeat kinase 2 ISO (PMID:19640926) ParkinsonsUK-UCL PMID:19640926 NCBI chrNW_004936607:628,469...761,117 JBrowse link
G Lzts1 leucine zipper tumor suppressor 1 ISO (PMID:22354037) BHF-UCL PMID:22354037 NCBI chrNW_004936555:4,330,878...4,384,883 JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO (PMID:25327288)
(MGI:MGI:3690270|PMID:16714284), (MGI:MGI:5563734|PMID:23274896)
MGI PMID:16714284, PMID:23274896, PMID:25327288 MGI:MGI:3690270, MGI:MGI:5563734 NCBI chrNW_004936474:158,376...282,310 JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 ISO (MGI:MGI:3723543|PMID:17468177) MGI PMID:17468177 MGI:MGI:3723543 NCBI chrNW_004936550:2,983,172...3,032,222 JBrowse link
G Nrbp2 nuclear receptor binding protein 2 ISO (PMID:22354037) BHF-UCL PMID:22354037 NCBI chrNW_004936470:8,327,326...8,333,573 JBrowse link
G Pink1 PTEN induced kinase 1 ISO (PMID:19279012) ParkinsonsUK-UCL PMID:19279012 NCBI chrNW_004936474:6,574,471...6,589,478 JBrowse link
G Poldip2 DNA polymerase delta interacting protein 2 ISO (MGI:MGI:5588624|PMID:24797518) MGI PMID:24797518 MGI:MGI:5588624 NCBI chrNW_004936538:4,504,039...4,512,785 JBrowse link
G Qsox1 quiescin sulfhydryl oxidase 1 ISO (PMID:24475161) CACAO PMID:24475161 NCBI chrNW_004936481:8,975,818...9,013,684 JBrowse link
G Smcr8 SMCR8-C9orf72 complex subunit ISO (PMID:28195531) HGNC PMID:28195531 NCBI chrNW_004936741:1,838,974...1,848,742 JBrowse link
G Tsc1 TSC complex subunit 1 ISO PMID:23435171 ParkinsonsUK-UCL PMID:23435171 RGD:10448950 NCBI chrNW_004936487:19,331,183...19,386,841 JBrowse link
G Tsc2 TSC complex subunit 2 ISO RGD PMID:24599401 RGD:11568679 NCBI chrNW_004936694:1,958,152...1,993,373 JBrowse link
G Usp36 ubiquitin specific peptidase 36 ISO (PMID:22622177) UniProtKB PMID:22622177 NCBI chrNW_004936594:3,194,842...3,228,701 JBrowse link
negative regulation of macroautophagy by TORC1 signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec16a C-type lectin domain containing 16A ISO (PMID:28223137) UniProtKB PMID:28223137 NCBI chrNW_004936530:9,089,478...9,264,563 JBrowse link
negative regulation of membrane protein ectodomain proteolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il10 interleukin 10 ISO (PMID:18383040) BHF-UCL PMID:18383040 NCBI chrNW_004936557:5,834,874...5,838,502 JBrowse link
G Lrig2 leucine rich repeats and immunoglobulin like domains 2 ISO (MGI:MGI:5702499|PMID:26651291) MGI PMID:26651291 MGI:MGI:5702499 NCBI chrNW_004936690:1,591,741...1,642,183 JBrowse link
G Ptpn3 protein tyrosine phosphatase non-receptor type 3 ISO (PMID:12207026) BHF-UCL PMID:12207026 NCBI chrNW_004936559:3,436,114...3,547,316 JBrowse link
G Timp1 TIMP metallopeptidase inhibitor 1 ISO (PMID:12714508) UniProtKB PMID:12714508 NCBI chrNW_004936502:13,345,936...13,350,170 JBrowse link
G Timp3 TIMP metallopeptidase inhibitor 3 ISO (PMID:18383040) BHF-UCL PMID:18383040 NCBI chrNW_004936492:6,996,627...7,046,137 JBrowse link
negative regulation of miRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tent2 terminal nucleotidyltransferase 2 ISO (PMID:23200856) UniProtKB PMID:23200856 NCBI chrNW_004936549:7,401,532...7,465,264 JBrowse link
negative regulation of mitochondrial RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrpprc leucine rich pentatricopeptide repeat containing ISO (MGI:MGI:5438202|PMID:22045337)
(MGI:MGI:5301479|PMID:21880015)
MGI PMID:21880015, PMID:22045337 MGI:MGI:5301479, MGI:MGI:5438202 NCBI chrNW_004936508:7,961,079...8,068,228 JBrowse link
G Slirp SRA stem-loop interacting RNA binding protein ISO (MGI:MGI:5438202|PMID:22045337) MGI PMID:22045337 MGI:MGI:5438202 NCBI chrNW_004936488:6,486,807...6,494,555 JBrowse link
negative regulation of mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec16a C-type lectin domain containing 16A ISO (MGI:MGI:5603233|PMID:24949970) MGI PMID:24949970 MGI:MGI:5603233 NCBI chrNW_004936530:9,089,478...9,264,563 JBrowse link
G Rnf41 ring finger protein 41 ISO (MGI:MGI:5603233|PMID:24949970) MGI PMID:24949970 MGI:MGI:5603233 NCBI chrNW_004936646:605,302...630,645 JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase ISO (MGI:MGI:5319065|PMID:22044588) MGI PMID:22044588 MGI:MGI:5319065 NCBI chrNW_004936606:4,518,525...4,540,109 JBrowse link
G Tp53 tumor protein p53 ISO (MGI:MGI:5319065|PMID:22044588) MGI PMID:22044588 MGI:MGI:5319065 NCBI chrNW_004936595:919,807...935,367 JBrowse link
G Usp30 ubiquitin specific peptidase 30 ISO RGD PMID:24896179 RGD:13208875 NCBI chrNW_004936769:874,188...902,690 JBrowse link
negative regulation of mitophagy in response to mitochondrial depolarization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Htra2 HtrA serine peptidase 2 ISO (MGI:MGI:5581539|PMID:24709290) ParkinsonsUK-UCL PMID:24709290 MGI:MGI:5581539 NCBI chrNW_004936556:741,718...746,016 JBrowse link
negative regulation of mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fmr1 FMRP translational regulator 1 ISO (PMID:25225333) CAFA PMID:25225333 NCBI chrNW_004936513:1,290,038...1,327,850 JBrowse link
G Pkp1 plakophilin 1 ISO (PMID:25225333) CAFA PMID:25225333 NCBI chrNW_004936567:3,089,902...3,138,252 JBrowse link
G Pkp3 plakophilin 3 ISO (PMID:25225333) CAFA PMID:25225333 NCBI chrNW_004936888:270,883...280,118 JBrowse link
negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx34 DExH-box helicase 34 ISO (PMID:23828042) UniProtKB PMID:23828042 NCBI chrNW_004936664:1,056,003...1,082,282 JBrowse link
G Nbas NBAS subunit of NRZ tethering complex ISO (PMID:23828042) UniProtKB PMID:23828042 NCBI chrNW_004936493:14,940,592...15,241,209 JBrowse link
G Pabpc1 poly(A) binding protein cytoplasmic 1 ISO (PMID:18447585) UniProtKB PMID:18447585 NCBI chrNW_004936470:42,628,890...42,670,311 JBrowse link
G Secisbp2 SECIS binding protein 2 ISO (MGI:MGI:5582859|PMID:24274065) MGI PMID:24274065 MGI:MGI:5582859 NCBI chrNW_004936780:264,366...300,999 JBrowse link
negative regulation of nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tent4a terminal nucleotidyltransferase 4A ISO (PMID:30026317) UniProt PMID:30026317 NCBI chrNW_004936634:667,170...706,901 JBrowse link
G Tent4b terminal nucleotidyltransferase 4B ISO (PMID:30026317) UniProt PMID:30026317 NCBI chrNW_004936475:3,266,763...3,328,209 JBrowse link
G Tob1 transducer of ERBB2, 1 ISO (PMID:18377426) UniProtKB PMID:18377426 NCBI chrNW_004936490:10,876,113...10,880,267 JBrowse link
negative regulation of phosphatidylcholine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoc1 apolipoprotein C1 ISO (PMID:2302419) BHF-UCL PMID:2302419 NCBI chrNW_004936706:1,519,248...1,520,102 JBrowse link
negative regulation of proteasomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alad aminolevulinate dehydratase ISO (PMID:8175643) CAFA PMID:8175643 NCBI chrNW_004936559:226,481...237,258 JBrowse link
G F8a1 coagulation factor VIII associated 1 ISO (PMID:27815841) UniProt PMID:27815841 NCBI chrNW_004936927:234,162...236,881 JBrowse link
G Gabarapl2 GABA type A receptor associated protein like 2 ISO (PMID:21669198) BHF-UCL PMID:21669198 NCBI chrNW_004936475:24,238,262...24,249,249 JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 ISO PMID:17517623
(MGI:MGI:6148636|PMID:17517623)
ARUK-UCL PMID:17517623 MGI:MGI:6148636, RGD:13514081 NCBI chrNW_004936476:15,830,459...15,836,994 JBrowse link
G Lamp3 lysosomal associated membrane protein 3 ISO (PMID:25681212) ParkinsonsUK-UCL PMID:25681212 NCBI chrNW_004936566:365,326...394,985 JBrowse link
G LOC101974307 protein SCO1 homolog, mitochondrial ISO (MGI:MGI:5643882|PMID:25683716) MGI PMID:25683716 MGI:MGI:5643882 NCBI chrNW_004936595:3,523,789...3,537,933 JBrowse link
G LOC101977674 oligophrenin-1 ISO (MGI:MGI:5303043|PMID:21874017) UniProtKB PMID:21874017 MGI:MGI:5303043 NCBI chrNW_004936635:6,966...243,209 JBrowse link
G Marchf7 membrane associated ring-CH-type finger 7 ISO (PMID:29295817) UniProtKB PMID:29295817 NCBI chrNW_004936469:18,966,239...19,016,829 JBrowse link
G Prkcg protein kinase C gamma ISO (MGI:MGI:5467682|PMID:23185022) UniProtKB PMID:23185022 MGI:MGI:5467682 NCBI chrNW_004936994:87,525...105,125 JBrowse link
G Psme3ip1 proteasome activator subunit 3 interacting protein 1 ISO (PMID:29934401) UniProt PMID:29934401 NCBI chrNW_004936475:9,266,778...9,294,173 JBrowse link
G Psmf1 proteasome inhibitor subunit 1 ISO (PMID:10764772) UniProtKB PMID:10764772 NCBI chrNW_004936485:17,485,600...17,517,642 JBrowse link
G Usp19 ubiquitin specific peptidase 19 ISO (MGI:MGI:5614537|PMID:25088257) ParkinsonsUK-UCL PMID:25088257 MGI:MGI:5614537 NCBI chrNW_004936529:814,649...826,008 JBrowse link
negative regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag5 BAG cochaperone 5 ISO (PMID:24475098) ParkinsonsUK-UCL PMID:24475098 NCBI chrNW_004936621:1,573,237...1,578,257 JBrowse link
G Bag6 BAG cochaperone 6 ISO (MGI:MGI:3808636|PMID:18678708) UniProtKB PMID:18678708 MGI:MGI:3808636 NCBI chrNW_004936727:1,866,235...1,885,266 JBrowse link
G Camlg calcium modulating ligand ISO (PMID:20553626) UniProt PMID:20553626 NCBI chrNW_004936597:1,979,029...1,988,281 JBrowse link
G Ccar2 cell cycle and apoptosis regulator 2 ISO (PMID:23398316) UniProtKB PMID:23398316 NCBI chrNW_004936555:6,341,455...6,356,677 JBrowse link
G Clec16a C-type lectin domain containing 16A ISO (MGI:MGI:5603233|PMID:24949970) MGI PMID:24949970 MGI:MGI:5603233 NCBI chrNW_004936530:9,089,478...9,264,563 JBrowse link
G Ddrgk1 DDRGK domain containing 1 ISO (PMID:28263186) UniProtKB PMID:28263186 NCBI chrNW_004936485:15,516,348...15,526,380 JBrowse link
G Eif3h eukaryotic translation initiation factor 3 subunit H ISO (PMID:32269044) FlyBase PMID:32269044 NCBI chrNW_004936470:29,509,154...29,606,124 JBrowse link
G Fhit fragile histidine triad diadenosine triphosphatase ISO (PMID:15313915) UniProtKB PMID:15313915 NCBI chrNW_004936473:397,140...1,424,805 JBrowse link
G Gipc1 GIPC PDZ domain containing family member 1 ISO (MGI:MGI:3807767|PMID:11546783) BHF-UCL PMID:11546783 MGI:MGI:3807767 NCBI chrNW_004936659:3,019,829...3,030,280 JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 ISO (PMID:16280321)
(PMID:24613385)
MGI
UniProtKB
PMID:16280321, PMID:24613385 NCBI chrNW_004936476:15,830,459...15,836,994 JBrowse link
G Klhl40 kelch like family member 40 ISO (MGI:MGI:5586592|PMID:24960163) MGI PMID:24960163 MGI:MGI:5586592 NCBI chrNW_004936695:2,417,938...2,424,622 JBrowse link
G Map1a microtubule associated protein 1A ISO (MGI:MGI:5703671|PMID:26609151) ARUK-UCL PMID:26609151 MGI:MGI:5703671 NCBI chrNW_004936471:6,685,565...6,706,860 JBrowse link
G Mtm1 myotubularin 1 ISO (MGI:MGI:5510937|PMID:23695157) MGI PMID:23695157 MGI:MGI:5510937 NCBI chrNW_004936714:1,792,893...1,870,338 JBrowse link
G N4bp1 NEDD4 binding protein 1 ISO (MGI:MGI:3829128|PMID:17592138) UniProtKB PMID:17592138 MGI:MGI:3829128 NCBI chrNW_004936475:1,743,205...1,765,466 JBrowse link
G Nop53 NOP53 ribosome biogenesis factor ISO (PMID:22522597) UniProtKB PMID:22522597 NCBI chrNW_004936664:1,334,487...1,343,867 JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase ISO (PMID:26678539) UniProtKB PMID:26678539 NCBI chrNW_004936762:99,335...137,833 JBrowse link
G Park7 Parkinsonism associated deglycase ISO (PMID:17015834) ParkinsonsUK-UCL PMID:17015834 NCBI chrNW_004936623:2,422,780...2,436,817 JBrowse link
G Pbk PDZ binding kinase ISO (MGI:MGI:5293269|PMID:21715333) MGI PMID:21715333 MGI:MGI:5293269 NCBI chrNW_004936675:704,001...722,769 JBrowse link
G Rpl11 ribosomal protein L11 ISO (MGI:MGI:5897550|PMID:21804542) UniProtKB PMID:21804542 MGI:MGI:5897550 NCBI chrNW_004936474:8,855,782...8,858,287 JBrowse link
G Rybp RING1 and YY1 binding protein ISO (PMID:27060496) UniProtKB PMID:27060496 NCBI chrNW_004936603:3,618,715...3,693,007 JBrowse link
G Sdcbp syndecan binding protein ISO (PMID:25893292) UniProtKB PMID:25893292 NCBI chrNW_004936496:14,331,971...14,347,123 JBrowse link
G Senp1 SUMO specific peptidase 1 ISO (MGI:MGI:3818351|PMID:17981124) MGI PMID:17981124 MGI:MGI:3818351 NCBI chrNW_004936512:5,932,594...5,989,819 JBrowse link
G Shh sonic hedgehog signaling molecule ISO (MGI:MGI:3624046|PMID:16611981) MGI PMID:16611981 MGI:MGI:3624046 NCBI chrNW_004936527:10,033,095...10,042,713 JBrowse link
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 ISO (MGI:MGI:5310666|PMID:22285184) MGI PMID:22285184 MGI:MGI:5310666 NCBI chrNW_004936596:1,257,723...1,407,358 JBrowse link
G Taf9 TATA-box binding protein associated factor 9 ISO (PMID:11278372) BHF-UCL PMID:11278372 NCBI chrNW_004936480:252,435...256,609 JBrowse link
G Tlk2 tousled like kinase 2 ISO (PMID:20016786) UniProtKB PMID:20016786 NCBI chrNW_004936541:3,303,563...3,422,093 JBrowse link
G Ttc36 tetratricopeptide repeat domain 36 ISO (MGI:MGI:6362140|PMID:31537781) MGI PMID:31537781 MGI:MGI:6362140 NCBI chrNW_004936542:3,567,469...3,571,393 JBrowse link
G Ubxn1 UBX domain protein 1 ISO (PMID:20351172) UniProtKB PMID:20351172 NCBI chrNW_004936581:584,519...587,863 JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 ISO (PMID:23770237) UniProtKB PMID:23770237 NCBI chrNW_004936638:1,242,950...1,289,376 JBrowse link
G Usp7 ubiquitin specific peptidase 7 ISO (PMID:26678539) UniProtKB PMID:26678539 NCBI chrNW_004936530:7,693,681...7,724,215 JBrowse link
G Wac WW domain containing adaptor with coiled-coil ISO (PMID:22354037) BHF-UCL PMID:22354037 NCBI chrNW_004936613:2,793,706...2,862,984 JBrowse link
negative regulation of protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrb1 adhesion G protein-coupled receptor B1 ISO (MGI:MGI:5643972|PMID:25751059) UniProtKB PMID:25751059 MGI:MGI:5643972 NCBI chrNW_004936470:9,247,749...9,313,230 JBrowse link
G Agap2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 ISO (PMID:18374643) MGI PMID:18374643 NCBI chrNW_004936646:1,865,154...1,881,614 JBrowse link
G Azin1 antizyme inhibitor 1 ISO downregulates antizyme degradation of ODC
(PMID:17900240)
RGD
UniProtKB
PMID:8631929, PMID:17900240 RGD:633334 NCBI chrNW_004936470:40,801,943...40,832,543 JBrowse link
G Azin2 antizyme inhibitor 2 ISO (PMID:17900240) UniProtKB PMID:17900240 NCBI chrNW_004936474:15,941,655...15,973,481 JBrowse link
G Banp BTG3 associated nuclear protein ISO (MGI:MGI:3579758|PMID:15701641) MGI PMID:15701641 MGI:MGI:3579758 NCBI chrNW_004936641:1,386,592...1,472,750 JBrowse link
G Dedd death effector domain containing ISO (MGI:MGI:5000188|PMID:21135503) MGI PMID:21135503 MGI:MGI:5000188 NCBI chrNW_004936903:436,949...448,670 JBrowse link
G Dysf dysferlin ISO (MGI:MGI:5433472|PMID:20724702) MGI PMID:20724702 MGI:MGI:5433472 NCBI chrNW_004936491:15,412,606...15,618,519 JBrowse link
G Egfr epidermal growth factor receptor ISO (PMID:17115032) UniProtKB PMID:17115032 NCBI chrNW_004936678:365,005...560,546 JBrowse link
G Fbxo43 F-box protein 43 ISO (MGI:MGI:3663227|PMID:16966421) MGI PMID:16966421 MGI:MGI:3663227 NCBI chrNW_004936470:43,091,516...43,100,973 JBrowse link
G Flna filamin A ISO (PMID:18322202) BHF-UCL PMID:18322202 NCBI chrNW_004936809:1,097,288...1,123,206 JBrowse link
G Fmn2 formin 2 ISO (PMID:23375502) UniProtKB PMID:23375502 NCBI chrNW_004936526:9,832,790...10,169,488 JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase ISO (MGI:MGI:3775717|PMID:16841086) MGI PMID:16841086 MGI:MGI:3775717 NCBI chrNW_004936679:388,500...588,518 JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A ISO (MGI:MGI:3054180|PMID:15317856) MGI PMID:15317856 MGI:MGI:3054180 NCBI chrNW_004936530:8,286,101...8,612,183 JBrowse link
G Grin2c glutamate ionotropic receptor NMDA type subunit 2C ISO (MGI:MGI:3054180|PMID:15317856) MGI PMID:15317856 MGI:MGI:3054180 NCBI chrNW_004936594:197,337...208,468 JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase ISO (MGI:MGI:6270905|PMID:20876579) ARUK-UCL PMID:20876579 MGI:MGI:6270905 NCBI chrNW_004936549:1,378,536...1,400,501 JBrowse link
G Ins insulin ISO (PMID:15185208) UniProtKB PMID:15185208 NCBI chrNW_004936816:1,002,137...1,003,357 JBrowse link
G Irak3 interleukin 1 receptor associated kinase 3 ISO (MGI:MGI:3843426|PMID:17379480)
(PMID:17379480), (PMID:18156187)
BHF-UCL PMID:17379480, PMID:18156187 MGI:MGI:3843426 NCBI chrNW_004936545:4,233,353...4,284,324 JBrowse link
G LOC101955024 lanosterol 14-alpha demethylase ISO (MGI:MGI:6270905|PMID:20876579) ARUK-UCL PMID:20876579 MGI:MGI:6270905 NCBI chrNW_004936621:2,209,255...2,232,404 JBrowse link
G Mad2l1 mitotic arrest deficient 2 like 1 ISO (PMID:11459825) UniProtKB PMID:11459825 NCBI chrNW_004936662:92,421...98,531 JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 ISO (PMID:11459826) UniProtKB PMID:11459826 NCBI chrNW_004936474:538,703...542,901 JBrowse link
G Mdm4 MDM4 regulator of p53 ISO (PMID:10608892) UniProtKB PMID:10608892 NCBI chrNW_004936567:268,151...299,494 JBrowse link
G Mycbp2 MYC binding protein 2 ISO (MGI:MGI:3849342|PMID:19398581) MGI PMID:19398581 MGI:MGI:3849342 NCBI chrNW_004936511:3,977,950...4,248,959 JBrowse link
G Nos2 nitric oxide synthase 2 ISO (MGI:MGI:4943392|PMID:18003616) BHF-UCL PMID:18003616 MGI:MGI:4943392 NCBI chrNW_004936538:4,052,277...4,097,051 JBrowse link
G Nrg1 neuregulin 1 ISO (MGI:MGI:4454957|PMID:20448149) MGI PMID:20448149 MGI:MGI:4454957 NCBI chrNW_004936766:1,104,841...1,306,368 JBrowse link
G Park7 Parkinsonism associated deglycase ISO (MGI:MGI:5575789|PMID:24899725) ParkinsonsUK-UCL PMID:24899725 MGI:MGI:5575789 NCBI chrNW_004936623:2,422,780...2,436,817 JBrowse link
G Phb prohibitin ISO (PMID:24732013) UniProtKB PMID:24732013 NCBI chrNW_004936490:12,127,065...12,138,870 JBrowse link
G Pin1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 ISO (PMID:11533658) ParkinsonsUK-UCL PMID:11533658 NCBI chrNW_004936659:309,530...321,294 JBrowse link
G Prkcg protein kinase C gamma ISO (PMID:15808853) HGNC PMID:15808853 NCBI chrNW_004936994:87,525...105,125 JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit ISO (MGI:MGI:3581324|PMID:15923614) MGI PMID:15923614 MGI:MGI:3581324 NCBI chrNW_004936599:3,800,142...3,810,583 JBrowse link
G Rilp Rab interacting lysosomal protein ISO (PMID:17010938) UniProtKB PMID:17010938 NCBI chrNW_004936538:7,775,942...7,779,563 JBrowse link
G Serpine2 serpin family E member 2 ISO (MGI:MGI:3654805|PMID:16319172)
(MGI:MGI:3521551|PMID:15509762)
MGI PMID:15509762, PMID:16319172 MGI:MGI:3521551, MGI:MGI:3654805 NCBI chrNW_004936569:5,642,328...5,668,278 JBrowse link
G Sf3b3 splicing factor 3b subunit 3 ISO (PMID:23951410) CACAO PMID:23951410 NCBI chrNW_004936475:23,038,424...23,086,134 JBrowse link
G Shh sonic hedgehog signaling molecule ISO (MGI:MGI:3624046|PMID:16611981) MGI PMID:16611981 MGI:MGI:3624046 NCBI chrNW_004936527:10,033,095...10,042,713 JBrowse link
G Sirt2 sirtuin 2 ISO (PMID:20543840) UniProtKB PMID:20543840 NCBI chrNW_004936661:1,828,868...1,849,892 JBrowse link
G Smad3 SMAD family member 3 ISO PMID:16690606
PMID:20097766
CACAO
BHF-UCL
PMID:16690606, PMID:20097766 RGD:11079190, RGD:15023472 NCBI chrNW_004936471:27,080,662...27,185,861 JBrowse link
G Smad4 SMAD family member 4 ISO PMID:20097766 BHF-UCL PMID:20097766 RGD:11079190 NCBI chrNW_004936497:12,242,869...12,278,012 JBrowse link
G Snx12 sorting nexin 12 ISO (PMID:22719997) UniProtKB PMID:22719997 NCBI chrNW_004936762:523,641...534,646 JBrowse link
G Snx3 sorting nexin 3 ISO (PMID:18767904) UniProtKB PMID:18767904 NCBI chrNW_004936564:4,472,171...4,520,732 JBrowse link
G Trim40 tripartite motif containing 40 ISO (PMID:21474709) UniProtKB PMID:21474709 NCBI chrNW_004936723:897,213...909,263 JBrowse link
negative regulation of proteolysis involved in cellular protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Efna1 ephrin A1 ISO (PMID:24217950) ARUK-UCL PMID:24217950 NCBI chrNW_004936580:4,654,503...4,660,950 JBrowse link
G Epha4 EPH receptor A4 ISO (PMID:24217950) ARUK-UCL PMID:24217950 NCBI chrNW_004936569:3,539,269...3,670,322 JBrowse link
negative regulation of receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mtmr2 myotubularin related protein 2 ISO PMID:20410104 BHF-UCL PMID:20410104 RGD:8553482 NCBI chrNW_004936700:1,790,592...1,873,019 JBrowse link
negative regulation of RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrde2 NRDE-2, necessary for RNA interference, domain containing ISO (PMID:30842217) UniProt PMID:30842217 NCBI chrNW_004936488:17,473,787...17,519,278 JBrowse link
negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Styx serine/threonine/tyrosine interacting protein ISO (PMID:28007894) UniProtKB PMID:28007894 NCBI chrNW_004936697:2,087,689...2,120,507 JBrowse link
negative regulation of triglyceride catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoc3 apolipoprotein C3 ISO (PMID:18635818), (PMID:3973011) BHF-UCL PMID:3973011, PMID:18635818 NCBI chrNW_004936542:2,106,927...2,108,412 JBrowse link
G Gpld1 glycosylphosphatidylinositol specific phospholipase D1 ISO (MGI:MGI:3617276|PMID:16219662) UniProtKB PMID:16219662 MGI:MGI:3617276 NCBI chrNW_004936671:780,173...827,628 JBrowse link
G Pik3cg phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma ISO RGD PMID:21435395 RGD:6482711 NCBI chrNW_004936479:17,084,006...17,112,264 JBrowse link
G Plin5 perilipin 5 ISO (MGI:MGI:5476606|PMID:23345411), (MGI:MGI:5559662|PMID:22675471) UniProtKB PMID:22675471, PMID:23345411 MGI:MGI:5476606, MGI:MGI:5559662 NCBI chrNW_004936588:2,629,762...2,637,303 JBrowse link
G Sorl1 sortilin related receptor 1 ISO (MGI:MGI:5811185|PMID:27322061) UniProt PMID:27322061 MGI:MGI:5811185 NCBI chrNW_004936542:6,192,407...6,352,835 JBrowse link
negative regulation of ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anks1a ankyrin repeat and sterile alpha motif domain containing 1A ISO (MGI:MGI:4461099|PMID:20100865) MGI PMID:20100865 MGI:MGI:4461099 NCBI chrNW_004936476:24,093,838...24,200,611 JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 ISO (PMID:28031292) ARUK-UCL PMID:28031292 NCBI chrNW_004936485:17,966,993...18,021,191 JBrowse link
G Csnk2a2 casein kinase 2 alpha 2 ISO (PMID:28031292) ARUK-UCL PMID:28031292 NCBI chrNW_004936475:10,030,408...10,073,576 JBrowse link
G Hfe homeostatic iron regulator ISO (PMID:24904118) BHF-UCL PMID:24904118 NCBI chrNW_004936671:1,940,079...1,947,574 JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 ISO (PMID:21628596) FlyBase PMID:21628596 NCBI chrNW_004936592:3,800,619...3,934,347 JBrowse link
G Pdcl3 phosducin like 3 ISO (PMID:23792958) MGI PMID:23792958 NCBI chrNW_004936661:419,113...428,032 JBrowse link
G Pml PML nuclear body scaffold ISO (PMID:15195100) UniProtKB PMID:15195100 NCBI chrNW_004936471:33,135,186...33,173,218 JBrowse link
G Psen1 presenilin 1 ISO (MGI:MGI:4887523|PMID:20208556) BHF-UCL PMID:20208556 MGI:MGI:4887523 NCBI chrNW_004936488:2,464,623...2,528,807 JBrowse link
G Psen2 presenilin 2 ISO (MGI:MGI:4887523|PMID:20208556) BHF-UCL PMID:20208556 MGI:MGI:4887523 NCBI chrNW_004936526:3,584,194...3,611,719 JBrowse link
G Qrich2 glutamine rich 2 ISO (MGI:MGI:6277293|PMID:30683861)
(PMID:30683861)
UniProt PMID:30683861 MGI:MGI:6277293 NCBI chrNW_004936594:1,383,332...1,423,961 JBrowse link
G Rpl11 ribosomal protein L11 ISO (PMID:18560357) CAFA PMID:18560357 NCBI chrNW_004936474:8,855,782...8,858,287 JBrowse link
G Rpl23 ribosomal protein L23 ISO (PMID:15314173) CAFA PMID:15314173 NCBI chrNW_004936490:14,240,635...14,245,194 JBrowse link
G Rpl5 ribosomal protein L5 ISO (PMID:18560357) CAFA PMID:18560357 NCBI chrNW_004936537:6,341,961...6,344,831 JBrowse link
G Rps7 ribosomal protein S7 ISO (PMID:17310983) CAFA PMID:17310983 NCBI chrNW_004936532:1,734,993...1,740,202 JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat containing alpha ISO (PMID:23129660) UniProtKB PMID:23129660 NCBI chrNW_004936588:1,599,453...1,616,480 JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling ISO (MGI:MGI:4355593|PMID:19684112) MGI PMID:19684112 MGI:MGI:4355593 NCBI chrNW_004936600:3,270,662...3,381,722 JBrowse link
G Taf1 TATA-box binding protein associated factor 1 ISO (PMID:17237821) ParkinsonsUK-UCL PMID:17237821 NCBI chrNW_004936762:189,710...271,759 JBrowse link
G Wnt1 Wnt family member 1 ISO (MGI:MGI:3628833|PMID:16601693) MGI PMID:16601693 MGI:MGI:3628833 NCBI chrNW_004936512:6,781,001...6,785,358 JBrowse link
positive regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elavl4 ELAV like RNA binding protein 4 ISO (PMID:18218628) UniProt PMID:18218628 NCBI chrNW_004936522:10,349,684...10,435,963 JBrowse link
G Larp4b La ribonucleoprotein 4B ISO (PMID:26001795) FlyBase PMID:26001795 NCBI chrNW_004936484:13,238,456...13,302,962 JBrowse link
G Rbm24 RNA binding motif protein 24 ISO (PMID:24356969) UniProtKB PMID:24356969 NCBI chrNW_004936552:3,291,727...3,304,332 JBrowse link
G Tent4a terminal nucleotidyltransferase 4A ISO (PMID:30026317) UniProt PMID:30026317 NCBI chrNW_004936634:667,170...706,901 JBrowse link
G Tent4b terminal nucleotidyltransferase 4B ISO (PMID:30026317) UniProt PMID:30026317 NCBI chrNW_004936475:3,266,763...3,328,209 JBrowse link
RNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Naf1 nuclear assembly factor 1 ribonucleoprotein ISO (MGI:MGI:5816163|PMID:27510903) BHF-UCL PMID:27510903 MGI:MGI:5816163 NCBI chrNW_004936555:2,392,202...2,428,857 JBrowse link
G Tent2 terminal nucleotidyltransferase 2 ISO (PMID:23200856) UniProtKB PMID:23200856 NCBI chrNW_004936549:7,401,532...7,465,264 JBrowse link
suppression by virus of host autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg7 autophagy related 7 ISO (PMID:23290079) CACAO PMID:23290079 NCBI chrNW_004936602:1,938,720...2,179,239 JBrowse link
telomerase RNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx36 DEAH-box helicase 36 ISO (PMID:22238380) BHF-UCL PMID:22238380 NCBI chrNW_004936519:1,946,684...1,987,036 JBrowse link
G Dkc1 dyskerin pseudouridine synthase 1 ISO (PMID:25467444), (PMID:26950371) BHF-UCL PMID:25467444, PMID:26950371 NCBI chrNW_004936927:134,770...144,057 JBrowse link
G Naf1 nuclear assembly factor 1 ribonucleoprotein ISO (PMID:27510903) BHF-UCL PMID:27510903 NCBI chrNW_004936555:2,392,202...2,428,857 JBrowse link
G Parn poly(A)-specific ribonuclease ISO (PMID:26482878), (PMID:26950371) BHF-UCL PMID:26482878, PMID:26950371 NCBI chrNW_004936501:2,666,908...2,810,159 JBrowse link
tRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nsun2 NOP2/Sun RNA methyltransferase 2 ISO (MGI:MGI:6194005|PMID:22885326) UniProt PMID:22885326 MGI:MGI:6194005 NCBI chrNW_004936634:798,894...825,413 JBrowse link
G Trdmt1 tRNA aspartic acid methyltransferase 1 ISO (MGI:MGI:6194005|PMID:22885326) UniProt PMID:22885326 MGI:MGI:6194005 NCBI chrNW_004936520:10,104,050...10,122,057 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11998
    metabolic process 7668
      catabolic process 1641
        negative regulation of catabolic process 300
          negative regulation of anthocyanin catabolic process 0
          negative regulation of cellodextrin catabolic process 0
          negative regulation of cellooligosaccharide catabolic process 0
          negative regulation of cellotriose catabolic process 0
          negative regulation of cellular catabolic process + 237
          negative regulation of collagen catabolic process 0
          negative regulation of cyclodextrin catabolic process 0
          negative regulation of galactoglucomannan catabolic process 0
          negative regulation of galactomannan catabolic process 0
          negative regulation of glucomannan catabolic process 0
          negative regulation of glucose catabolic process to lactate via pyruvate 3
          negative regulation of glycolytic process + 16
          negative regulation of lipid catabolic process + 27
          negative regulation of pectin catabolic process 0
          negative regulation of pentose catabolic process to ethanol + 0
          negative regulation of protein catabolic process + 122
Path 2
Term Annotations click to browse term
  biological_process 11998
    biological regulation 8793
      regulation of biological process 8336
        regulation of metabolic process 5080
          negative regulation of metabolic process 2541
            negative regulation of catabolic process 300
              negative regulation of anthocyanin catabolic process 0
              negative regulation of cellodextrin catabolic process 0
              negative regulation of cellooligosaccharide catabolic process 0
              negative regulation of cellotriose catabolic process 0
              negative regulation of cellular catabolic process + 237
              negative regulation of collagen catabolic process 0
              negative regulation of cyclodextrin catabolic process 0
              negative regulation of galactoglucomannan catabolic process 0
              negative regulation of galactomannan catabolic process 0
              negative regulation of glucomannan catabolic process 0
              negative regulation of glucose catabolic process to lactate via pyruvate 3
              negative regulation of glycolytic process + 16
              negative regulation of lipid catabolic process + 27
              negative regulation of pectin catabolic process 0
              negative regulation of pentose catabolic process to ethanol + 0
              negative regulation of protein catabolic process + 122
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.