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ONTOLOGY REPORT - ANNOTATIONS


Term:cytidine deamination
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Accession:GO:0009972 term browser browse the term
Definition:The removal of amino group in the presence of water.


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cytidine deamination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aicda activation-induced cytidine deaminase ISO (MGI:MGI:2656023|PMID:12692563) RGD PMID:12692563 MGI:MGI:2656023 NCBI chr 4:155,359,909...155,371,104
Ensembl chr 4:155,359,921...155,369,671
JBrowse link
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:155,386,367...155,414,034
Ensembl chr 4:155,386,711...155,401,480
JBrowse link
G Apobec2 apolipoprotein B mRNA editing enzyme catalytic subunit 2 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:14,529,218...14,542,731
Ensembl chr 9:14,529,218...14,542,731
JBrowse link
G Apobec3 apolipoprotein B mRNA editing enzyme catalytic subunit 3 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:121,108,108...121,128,346
Ensembl chr 7:121,109,241...121,128,542
JBrowse link
G Cda cytidine deaminase IDA
IBA
ISO
PMID:21873635
(PMID:9596658)
RGD PMID:9596658, PMID:675715, PMID:21873635 RGD:2316616, RGD:13792537 NCBI chr 5:156,703,579...156,734,541
Ensembl chr 5:156,703,579...156,734,541
JBrowse link
G Cdadc1 cytidine and dCMP deaminase domain containing 1 ISO (PMID:26945630) RGD PMID:26945630 NCBI chr15:39,865,094...39,894,122
Ensembl chr15:39,882,210...39,893,979
JBrowse link
G LOC100909857 cytidine deaminase-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:156,756,678...156,781,306
Ensembl chr 5:156,757,044...156,781,291
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20028
    cellular process 18800
      cellular metabolic process 11085
        cellular nitrogen compound metabolic process 6696
          cellular nitrogen compound catabolic process 430
            pyrimidine-containing compound catabolic process 28
              pyrimidine nucleoside catabolic process 11
                pyrimidine ribonucleoside catabolic process 9
                  cytidine catabolic process 7
                    cytidine deamination 7
Path 2
Term Annotations click to browse term
  biological_process 20028
    metabolic process 12271
      cellular metabolic process 11085
        cellular aromatic compound metabolic process 5715
          nucleobase-containing compound metabolic process 5489
            nucleobase-containing small molecule metabolic process 591
              nucleoside metabolic process 93
                pyrimidine nucleoside metabolic process 15
                  pyrimidine ribonucleoside metabolic process 9
                    cytidine metabolic process 7
                      cytidine catabolic process 7
                        cytidine deamination 7
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.