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ONTOLOGY REPORT - ANNOTATIONS


Term:response to metal ion
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Accession:GO:0010038 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a metal ion stimulus.
Synonyms:exact_synonym: response to metal
 narrow_synonym: response to heavy metal
 related_synonym: heavy metal sensitivity/resistance


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response to metal ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alad aminolevulinate dehydratase ISO cis-platin
bismuth
RGD PMID:3629603, PMID:15302091 RGD:1599017, RGD:4144818 NCBI chrNW_004936559:226,481...237,258 JBrowse link
G Atp12a ATPase H+/K+ transporting non-gastric alpha2 subunit ISO RGD PMID:16046397 RGD:2301240 NCBI chrNW_004936720:2,363,933...2,378,426 JBrowse link
G Casp3 caspase 3 ISO RGD PMID:18483861 RGD:2293312 NCBI chrNW_004936554:4,571,072...4,593,765 JBrowse link
G Casp6 caspase 6 ISO RGD PMID:11960910 RGD:2301328 NCBI chrNW_004936563:912,502...920,025 JBrowse link
G Casr calcium sensing receptor ISO GdCl3 RGD PMID:22312704 RGD:7205674 NCBI chrNW_004936536:8,574,064...8,599,446 JBrowse link
G Daxx death domain associated protein ISO RGD PMID:17692352 RGD:9587799 NCBI chrNW_004936476:25,546,091...25,550,390 JBrowse link
G Fech ferrochelatase ISO bismuth RGD PMID:3629603 RGD:4144818 NCBI chrNW_004936497:6,755,626...6,788,568 JBrowse link
G Gphn gephyrin ISO (PMID:9990024) CAFA PMID:9990024 NCBI chrNW_004936495:9,970,683...10,565,467 JBrowse link
G Hmbs hydroxymethylbilane synthase ISO cisplatin RGD PMID:4040350 RGD:4144805 NCBI chrNW_004936542:4,037,888...4,046,089 JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 ISO vanadate RGD PMID:8100835 RGD:2326137 NCBI chrNW_004936627:4,451,847...4,473,163 JBrowse link
G Hsd17b3 hydroxysteroid 17-beta dehydrogenase 3 ISO hexavalent chromium RGD PMID:17822870 RGD:4890970 NCBI chrNW_004936487:228,301...282,495 JBrowse link
G Keap1 kelch like ECH associated protein 1 ISO gadolinium chloride RGD PMID:22649286 RGD:6902894 NCBI chrNW_004936659:785,059...793,775 JBrowse link
G Lck LCK proto-oncogene, Src family tyrosine kinase ISO RGD PMID:11477538 RGD:1600227 NCBI chrNW_004936474:15,293,115...15,314,072 JBrowse link
G LOC101954950 aromatase ISO triphenyltin RGD PMID:20708649 RGD:4890354 NCBI chrNW_004936471:13,107,603...13,136,910 JBrowse link
G LOC101972957 vitamin D 25-hydroxylase ISO depleted uranium RGD PMID:16502312 RGD:1601036 NCBI chrNW_004936528:3,881,630...3,897,613 JBrowse link
G Nedd4l NEDD4 like E3 ubiquitin protein ligase ISO (PMID:11244092) UniProtKB PMID:11244092 NCBI chrNW_004936497:6,106,284...6,318,339 JBrowse link
G Nos3 nitric oxide synthase 3 ISO titanium RGD PMID:19446049 RGD:7794800 NCBI chrNW_004936527:6,427,147...6,445,770 JBrowse link
G Pklr pyruvate kinase L/R ISO sodium tungstate RGD PMID:11357483 RGD:1625593 NCBI chrNW_004936580:4,770,977...4,799,316 JBrowse link
G Slc18a2 solute carrier family 18 member A2 ISO welding fumes (Mn, Fe, Cr, Zn) RGD PMID:20224926 RGD:5130952 NCBI chrNW_004936486:7,075,373...7,108,984 JBrowse link
G Th tyrosine hydroxylase ISO welding fumes (Mn, Fe, Cr, Zn) RGD PMID:20224926 RGD:5130952 NCBI chrNW_004936794:478,651...486,887 JBrowse link
G Tnnc1 troponin C1, slow skeletal and cardiac type ISO RGD PMID:14985239 RGD:1598612 NCBI chrNW_004936473:3,290,961...3,293,920 JBrowse link
G Tp53 tumor protein p53 ISO RGD PMID:17466256 RGD:2290578 NCBI chrNW_004936595:919,807...935,367 JBrowse link
cell motility in response to calcium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101966632 sperm-associated antigen 16 protein ISO (MGI:MGI:4452319|PMID:20042536) MGI PMID:20042536 MGI:MGI:4452319 NCBI chrNW_004936586:3,264,953...3,407,823 JBrowse link
cellular response to aluminum ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Becn1 beclin 1 ISO RGD PMID:22138567 RGD:6483058 NCBI chrNW_004936490:17,518,100...17,531,126 JBrowse link
cellular response to cadmium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 ISO (PMID:26514923) CAFA PMID:26514923 NCBI chrNW_004936621:620,163...639,115 JBrowse link
G Atp7a ATPase copper transporting alpha ISO RGD PMID:17584760 RGD:8655656 NCBI chrNW_004936683:2,874,022...2,936,214 JBrowse link
G Chuk component of inhibitor of nuclear factor kappa B kinase complex ISO (PMID:26514923) CAFA PMID:26514923 NCBI chrNW_004936636:33,933...78,990 JBrowse link
G Daxx death domain associated protein ISO (PMID:15016915) UniProtKB PMID:15016915 NCBI chrNW_004936476:25,546,091...25,550,390 JBrowse link
G Egfr epidermal growth factor receptor ISO (PMID:26514923) CAFA PMID:26514923 NCBI chrNW_004936678:365,005...560,546 JBrowse link
G Enpp2 ectonucleotide pyrophosphatase/phosphodiesterase 2 ISO RGD PMID:24361405 RGD:9685430 NCBI chrNW_004936470:26,994,549...27,099,758 JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit ISO (PMID:26514923) CAFA PMID:26514923 NCBI chrNW_004936488:4,384,710...4,388,118 JBrowse link
G Gsn gelsolin ISO RGD PMID:16280379 RGD:1599859 NCBI chrNW_004936487:9,749,755...9,802,787 JBrowse link
G Hmox1 heme oxygenase 1 ISO (MGI:MGI:3607883|PMID:16183037) MGI PMID:16183037 MGI:MGI:3607883 NCBI chrNW_004936492:5,042,353...5,049,216 JBrowse link
G Hsf1 heat shock transcription factor 1 ISO (PMID:10359787), (PMID:11514557), (PMID:15016915), (PMID:25963659) UniProtKB PMID:10359787, PMID:11514557, PMID:15016915, PMID:25963659 NCBI chrNW_004936470:7,927,734...7,950,805 JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 ISO RGD PMID:9736451 RGD:10059378 NCBI chrNW_004936542:7,577,192...7,581,598 JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit ISO (PMID:26514923) CAFA PMID:26514923 NCBI chrNW_004936522:3,034,364...3,037,632 JBrowse link
G LOC101966992 cytochrome b-245 heavy chain ISO RGD PMID:21195169 RGD:11040689 NCBI chrNW_004936502:4,631,750...4,676,686 JBrowse link
G LOC101969421 cytochrome P450 1A2 ISO (MGI:MGI:3607883|PMID:16183037) MGI PMID:16183037 MGI:MGI:3607883 NCBI chrNW_004936471:33,704,616...33,709,455 JBrowse link
G LOC101975820 cholesterol side-chain cleavage enzyme, mitochondrial ISO RGD PMID:17719163 RGD:4835171 NCBI chrNW_004936471:33,367,810...33,380,764 JBrowse link
G Mapk1 mitogen-activated protein kinase 1 ISO (PMID:26514923) CAFA PMID:26514923 NCBI chrNW_004936619:1,889,841...1,932,646 JBrowse link
G Mapk3 mitogen-activated protein kinase 3 ISO (PMID:26514923) CAFA PMID:26514923 NCBI chrNW_004936501:12,342,670...12,390,650 JBrowse link
G Mapk8 mitogen-activated protein kinase 8 ISO (PMID:26514923) CAFA PMID:26514923 NCBI chrNW_004936728:1,775,746...1,893,895 JBrowse link
G Mapk9 mitogen-activated protein kinase 9 ISO (PMID:26514923) CAFA PMID:26514923 NCBI chrNW_004936739:551,678...602,027 JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO (PMID:26514923) CAFA PMID:26514923 NCBI chrNW_004936514:7,038,240...7,045,873 JBrowse link
G Mt3 metallothionein 3 ISO (PMID:16387743) UniProtKB PMID:16387743 NCBI chrNW_004936475:8,864,512...8,866,516 JBrowse link
G Ncf1 neutrophil cytosolic factor 1 ISO (PMID:26514923) CAFA PMID:26514923 NCBI chrNW_004936543:3,617,369...3,630,990 JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase ISO RGD PMID:12499121 RGD:2317151 NCBI chrNW_004936602:3,411,106...3,418,826 JBrowse link
G Sod1 superoxide dismutase 1 ISO RGD PMID:17584760 RGD:8655656 NCBI chrNW_004936500:10,345,154...10,352,873 JBrowse link
G Star steroidogenic acute regulatory protein ISO RGD PMID:17719163 RGD:4835171 NCBI chrNW_004936710:1,523,289...1,530,181 JBrowse link
G Sumo1 small ubiquitin like modifier 1 ISO (PMID:11514557) UniProtKB PMID:11514557 NCBI chrNW_004936726:1,402,977...1,413,974 JBrowse link
G Ube2d3 ubiquitin conjugating enzyme E2 D3 ISO RGD PMID:21467746 RGD:13830870 NCBI chrNW_004936520:555,878...588,052 JBrowse link
G Ube2d4 ubiquitin conjugating enzyme E2 D4 (putative) ISO RGD PMID:21467746 RGD:13830870 NCBI chrNW_004936478:18,981,457...19,003,924 JBrowse link
cellular response to calcium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acer1 alkaline ceramidase 1 ISO (PMID:17713573) BHF-UCL PMID:17713573 NCBI chrNW_004936588:3,688,244...3,705,831 JBrowse link
G Adcy8 adenylate cyclase 8 ISO PMID:20410303
PMID:19158400
UniProt
RGD
PMID:19158400, PMID:19305019, PMID:20410303 RGD:13800545, RGD:7241269, RGD:7242424 NCBI chrNW_004936470:17,831,644...18,047,868 JBrowse link
G Add1 adducin 1 ISO (PMID:25978380)
(MGI:MGI:5796260|PMID:25978380)
CAFA PMID:25978380 MGI:MGI:5796260 NCBI chrNW_004936477:20,695,109...20,766,053 JBrowse link
G Adgrv1 adhesion G protein-coupled receptor V1 ISO (MGI:MGI:5523726|PMID:24191038) MGI PMID:24191038 MGI:MGI:5523726 NCBI chrNW_004936469:8,653,031...9,209,840 JBrowse link
G Alox15 arachidonate 15-lipoxygenase ISO (PMID:17052953) UniProtKB PMID:17052953 NCBI chrNW_004936677:3,232,183...3,241,307 JBrowse link
G Alox5ap arachidonate 5-lipoxygenase activating protein ISO (PMID:2300173) UniProtKB PMID:2300173 NCBI chrNW_004936472:25,477,094...25,502,823 JBrowse link
G Asph aspartate beta-hydroxylase ISO (PMID:21062895) UniProtKB PMID:21062895 NCBI chrNW_004936496:11,604,992...11,815,680 JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase ISO (PMID:18567582) BHF-UCL PMID:18567582 NCBI chrNW_004936592:4,728,371...4,833,830 JBrowse link
G Cacybp calcyclin binding protein ISO RGD PMID:11927578 RGD:625428 NCBI chrNW_004936481:13,198,744...13,203,518 JBrowse link
G Capn3 calpain 3 ISO (MGI:MGI:4839427|PMID:20460380) UniProtKB PMID:20460380 MGI:MGI:4839427 NCBI chrNW_004936471:5,667,839...5,711,822 JBrowse link
G Carf calcium responsive transcription factor ISO (PMID:11832226), (PMID:22174809) UniProtKB PMID:11832226, PMID:22174809 NCBI chrNW_004936726:1,958,561...2,010,972 JBrowse link
G Chp2 calcineurin like EF-hand protein 2 ISO (PMID:18815128) UniProtKB PMID:18815128 NCBI chrNW_004936501:8,374,323...8,377,195 JBrowse link
G Clic4 chloride intracellular channel 4 ISO (PMID:17636002) UniProtKB PMID:17636002 NCBI chrNW_004936474:9,664,872...9,711,036 JBrowse link
G Cpne2 copine 2 ISO (MGI:MGI:5634886|PMID:21087455) UniProtKB PMID:21087455 MGI:MGI:5634886 NCBI chrNW_004936475:9,237,845...9,262,588 JBrowse link
G Cpne3 copine 3 ISO (PMID:20010870), (PMID:21087455) UniProtKB PMID:20010870, PMID:21087455 NCBI chrNW_004936544:1,094,257...1,147,964 JBrowse link
G Cpne6 copine 6 ISO (MGI:MGI:5634886|PMID:21087455) UniProtKB PMID:21087455 MGI:MGI:5634886 NCBI chrNW_004936722:454,818...462,324 JBrowse link
G Cpne7 copine 7 ISO (PMID:21087455) UniProtKB PMID:21087455 NCBI chrNW_004936641:413,331...426,514 JBrowse link
G Crhbp corticotropin releasing hormone binding protein ISO (MGI:MGI:5315350|PMID:15976007) UniProtKB PMID:15976007 MGI:MGI:5315350 NCBI chrNW_004936549:64,866...78,272 JBrowse link
G Crp C-reactive protein ISO RGD PMID:22090504 RGD:6904210 NCBI chrNW_004936740:885,855...888,854 JBrowse link
G Dmtn dematin actin binding protein ISO (MGI:MGI:5465511|PMID:23060452) UniProtKB PMID:23060452 MGI:MGI:5465511 NCBI chrNW_004936555:5,884,746...5,911,171 JBrowse link
G Dpep1 dipeptidase 1 ISO (PMID:11139399), (PMID:17615681) UniProt PMID:11139399, PMID:17615681 NCBI chrNW_004936641:379,112...384,711 JBrowse link
G Ect2 epithelial cell transforming 2 ISO (PMID:15254234) UniProtKB PMID:15254234 NCBI chrNW_004936593:6,028...29,911 JBrowse link
G Edn1 endothelin 1 ISO RGD PMID:1852000 RGD:8662267 NCBI chrNW_004936534:885,489...892,292 JBrowse link
G Eef2k eukaryotic elongation factor 2 kinase ISO RGD PMID:19188248 RGD:10401231 NCBI chrNW_004936501:7,160,134...7,205,231 JBrowse link
G Endog endonuclease G ISO RGD PMID:12582256 RGD:9685368 NCBI chrNW_004936487:16,282,115...16,285,486 JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit ISO (MGI:MGI:3844178|PMID:19365557) MGI PMID:19365557 MGI:MGI:3844178 NCBI chrNW_004936488:4,384,710...4,388,118 JBrowse link
G Fosb FosB proto-oncogene, AP-1 transcription factor subunit ISO (MGI:MGI:3846264|PMID:19303854) MGI PMID:19303854 MGI:MGI:3846264 NCBI chrNW_004936706:1,900,954...1,907,567 JBrowse link
G Fus FUS RNA binding protein ISO RGD PMID:19103256 RGD:9685716 NCBI chrNW_004936501:13,529,732...13,541,102 JBrowse link
G Gpld1 glycosylphosphatidylinositol specific phospholipase D1 ISO (PMID:2760042)
PMID:1849823
UniProtKB
UniProt
PMID:1849823, PMID:2760042 RGD:8553426 NCBI chrNW_004936671:780,173...827,628 JBrowse link
G Hpca hippocalcin ISO (PMID:28398555) UniProtKB PMID:28398555 NCBI chrNW_004936474:15,786,171...15,794,830 JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 ISO RGD PMID:9058202 RGD:11354978 NCBI chrNW_004936487:13,348,465...13,352,717 JBrowse link
G Inhbb inhibin subunit beta B ISO RGD PMID:1634019 RGD:9743923 NCBI chrNW_004936469:50,186,036...50,191,455 JBrowse link
G Iqgap1 IQ motif containing GTPase activating protein 1 ISO (PMID:18567582) BHF-UCL PMID:18567582 NCBI chrNW_004936483:16,489,127...16,594,712 JBrowse link
G Itpkb inositol-trisphosphate 3-kinase B ISO (PMID:1654894) UniProtKB PMID:1654894 NCBI chrNW_004936526:3,378,046...3,477,177 JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit ISO (MGI:MGI:3846264|PMID:19303854) MGI PMID:19303854 MGI:MGI:3846264 NCBI chrNW_004936522:3,034,364...3,037,632 JBrowse link
G Junb JunB proto-oncogene, AP-1 transcription factor subunit ISO (MGI:MGI:3846264|PMID:19303854) MGI PMID:19303854 MGI:MGI:3846264 NCBI chrNW_004936659:1,890,786...1,892,619 JBrowse link
G Kcnh1 potassium voltage-gated channel subfamily H member 1 ISO (PMID:27005320), (PMID:27325704)
PMID:27516594
RGD
UniProtKB
UniProt
PMID:8790430, PMID:27005320, PMID:27325704, PMID:27516594 RGD:11533419, RGD:9693720 NCBI chrNW_004936557:2,133,596...2,493,170 JBrowse link
G Krt10 keratin 10 ISO (MGI:MGI:3846264|PMID:19303854) MGI PMID:19303854 MGI:MGI:3846264 NCBI chrNW_004936490:15,783,636...15,788,605 JBrowse link
G Lgmn legumain ISO (PMID:21237226) ARUK-UCL PMID:21237226 NCBI chrNW_004936733:772,764...792,792 JBrowse link
G Mcoln1 mucolipin 1 ISO (MGI:MGI:6103412|PMID:29019981) UniProtKB PMID:29019981 MGI:MGI:6103412 NCBI chrNW_004936588:4,600,344...4,608,793 JBrowse link
G Mef2a myocyte enhancer factor 2A ISO (PMID:16484498)
PMID:10521511
UniProtKB
UniProt
PMID:10521511, PMID:16484498 RGD:8553671 NCBI chrNW_004936483:3,837,891...3,982,334 JBrowse link
G Mef2c myocyte enhancer factor 2C ISO (MGI:MGI:5284792|PMID:15998798) UniProtKB PMID:15998798 MGI:MGI:5284792 NCBI chrNW_004936469:7,060,480...7,225,497 JBrowse link
G Mylk myosin light chain kinase ISO (MGI:MGI:3805620|PMID:18524939) MGI PMID:18524939 MGI:MGI:3805620 NCBI chrNW_004936725:1,418,930...1,594,697 JBrowse link
G Ncstn nicastrin ISO (MGI:MGI:5575797|PMID:24889619) MGI PMID:24889619 MGI:MGI:5575797 NCBI chrNW_004936740:285,789...301,918 JBrowse link
G Neurod2 neuronal differentiation 2 ISO (MGI:MGI:3621523|PMID:16504944) UniProtKB PMID:16504944 MGI:MGI:3621523 NCBI chrNW_004936490:14,801,636...14,803,437 JBrowse link
G Nfatc3 nuclear factor of activated T cells 3 ISO (MGI:MGI:5490841|PMID:23219532) MGI PMID:23219532 MGI:MGI:5490841 NCBI chrNW_004936475:18,462,424...18,557,832 JBrowse link
G Nlgn1 neuroligin 1 ISO PMID:14522992 ARUK-UCL PMID:14522992 RGD:13210536 NCBI chrNW_004936703:951,935...1,415,991 JBrowse link
G Nrxn1 neurexin 1 ISO PMID:14522992 ARUK-UCL PMID:14522992 RGD:13210536 NCBI chrNW_004936508:1,889,640...2,954,039 JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel ISO (MGI:MGI:5883145|PMID:27760766) UniProtKB PMID:27760766 MGI:MGI:5883145 NCBI chrNW_004936905:76,781...128,995 JBrowse link
G Ppif peptidylprolyl isomerase F ISO (MGI:MGI:3575990|PMID:15800627), (MGI:MGI:3576003|PMID:15800626), (MGI:MGI:3603054|PMID:16103352) UniProtKB PMID:15800626, PMID:15800627, PMID:16103352 MGI:MGI:3575990, MGI:MGI:3576003, MGI:MGI:3603054 NCBI chrNW_004936521:404,574...411,381 JBrowse link
G Ppp2ca protein phosphatase 2 catalytic subunit alpha ISO RGD PMID:18322138 RGD:8693423 NCBI chrNW_004936647:1,031,118...1,055,961 JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 ISO PMID:25788287
(MGI:MGI:6148484|PMID:25788287)
ARUK-UCL PMID:25788287 MGI:MGI:6148484, RGD:13514090 NCBI chrNW_004936518:1,817,051...1,843,376 JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 ISO PMID:25788287
(MGI:MGI:6148484|PMID:25788287)
ARUK-UCL PMID:25788287 MGI:MGI:6148484, RGD:13514090 NCBI chrNW_004936522:4,872,360...4,939,873 JBrowse link
G Rasgrp2 RAS guanyl releasing protein 2 ISO (PMID:24958846) UniProtKB PMID:24958846 NCBI chrNW_004936599:4,567,385...4,579,607 JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 ISO (PMID:19074138) UniProtKB PMID:19074138 NCBI chrNW_004936473:27,883,526...27,963,994 JBrowse link
G Slc25a23 solute carrier family 25 member 23 ISO (MGI:MGI:5490167|PMID:23344948) MGI PMID:23344948 MGI:MGI:5490167 NCBI chrNW_004936588:3,792,760...3,804,788 JBrowse link
G Slc25a24 solute carrier family 25 member 24 ISO (PMID:22015608) UniProtKB PMID:22015608 NCBI chrNW_004936731:173,366...224,156 JBrowse link
G Syt1 synaptotagmin 1 ISO PMID:12526776 ParkinsonsUK-UCL PMID:12526776 RGD:10047386 NCBI chrNW_004936698:65,210...575,538 JBrowse link
G Tjp1 tight junction protein 1 ISO (PMID:8636221) UniProtKB PMID:8636221 NCBI chrNW_004936483:1,814,870...2,045,802 JBrowse link
G Trpm2 transient receptor potential cation channel subfamily M member 2 ISO (PMID:19171771) UniProtKB PMID:19171771 NCBI chrNW_004936500:21,960...76,895 JBrowse link
G Wnk1 WNK lysine deficient protein kinase 1 ISO PMID:24803536 UniProt PMID:24803536 RGD:12910999 NCBI chrNW_004936606:933,637...1,069,885 JBrowse link
G Wnt5a Wnt family member 5A ISO (PMID:18703641) UniProtKB PMID:18703641 NCBI chrNW_004936473:6,031,627...6,052,211 JBrowse link
cellular response to cobalt ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha ISO RGD PMID:23814049 RGD:11341692 NCBI chrNW_004936683:2,874,022...2,936,214 JBrowse link
G Bnip3 BCL2 interacting protein 3 ISO (PMID:20436456) BHF-UCL PMID:20436456 NCBI chrNW_004936486:18,449,371...18,460,435 JBrowse link
G Fas Fas cell surface death receptor ISO RGD PMID:15519734 RGD:8662904 NCBI chrNW_004936735:209,369...234,582 JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO RGD PMID:10559391 RGD:2313660 NCBI chrNW_004936495:5,770,988...5,816,157 JBrowse link
G Serpinf1 serpin family F member 1 ISO RGD PMID:21922517 RGD:8554899 NCBI chrNW_004936538:7,885,816...7,898,308 JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase ISO (PMID:25928429) UniProtKB PMID:25928429 NCBI chrNW_004936606:4,518,525...4,540,109 JBrowse link
cellular response to copper ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aoc1 amine oxidase copper containing 1 ISO (PMID:9399025) UniProtKB PMID:9399025 NCBI chrNW_004936527:6,309,210...6,312,869 JBrowse link
G App amyloid beta precursor protein ISO RGD PMID:18583042 RGD:13782134 NCBI chrNW_004936640:1,549,977...1,787,436 JBrowse link
G Aqp1 aquaporin 1 (Colton blood group) ISO (PMID:7491270), (PMID:8584435) UniProtKB PMID:7491270, PMID:8584435 NCBI chrNW_004936478:7,146,997...7,160,369 JBrowse link
G Aqp2 aquaporin 2 ISO (PMID:8584435) UniProtKB PMID:8584435 NCBI chrNW_004936512:7,628,677...7,633,344 JBrowse link
G Atp7a ATPase copper transporting alpha ISO RGD PMID:20671235, PMID:23174565 RGD:11341702, RGD:11341707 NCBI chrNW_004936683:2,874,022...2,936,214 JBrowse link
G Atp7b ATPase copper transporting beta ISO RGD PMID:24614235 RGD:11341682 NCBI chrNW_004936565:4,694,294...4,763,661 JBrowse link
G Bace1 beta-secretase 1 ISO RGD PMID:18583042 RGD:13782134 NCBI chrNW_004936542:2,514,297...2,539,088 JBrowse link
G Becn1 beclin 1 ISO RGD PMID:22540380 RGD:11561917 NCBI chrNW_004936490:17,518,100...17,531,126 JBrowse link
G Daxx death domain associated protein ISO (PMID:15016915) UniProtKB PMID:15016915 NCBI chrNW_004936476:25,546,091...25,550,390 JBrowse link
G Eln elastin ISO RGD PMID:18847363 RGD:9585685 NCBI chrNW_004936543:3,135,169...3,165,023 JBrowse link
G Hsf1 heat shock transcription factor 1 ISO (PMID:15016915) UniProtKB PMID:15016915 NCBI chrNW_004936470:7,927,734...7,950,805 JBrowse link
G LOC101969148 cytochrome P450 1A1 ISO RGD PMID:24599699 RGD:11352816 NCBI chrNW_004936471:33,682,730...33,688,332 JBrowse link
G LOC101969421 cytochrome P450 1A2 ISO RGD PMID:24599699 RGD:11352816 NCBI chrNW_004936471:33,704,616...33,709,455 JBrowse link
G Map1lc3a microtubule associated protein 1 light chain 3 alpha ISO RGD PMID:22540380 RGD:11561917 NCBI chrNW_004936561:6,104,748...6,106,348 JBrowse link
G Nfe2l1 nuclear factor, erythroid 2 like 1 ISO (MGI:MGI:5577246|PMID:24462598) MGI PMID:24462598 MGI:MGI:5577246 NCBI chrNW_004936490:13,265,269...13,279,164 JBrowse link
G Nfe2l2 nuclear factor, erythroid 2 like 2 ISO (MGI:MGI:5577246|PMID:24462598) MGI PMID:24462598 MGI:MGI:5577246 NCBI chrNW_004936509:6,589,967...6,621,171 JBrowse link
G Prnp prion protein ISO (PMID:16254249) MGI PMID:16254249 NCBI chrNW_004936485:14,104,829...14,118,614 JBrowse link
G Snca synuclein alpha ISO (PMID:21320589) UniProtKB PMID:21320589 NCBI chrNW_004936685:2,077,017...2,175,298 JBrowse link
G Txnrd1 thioredoxin reductase 1 ISO RGD PMID:19781568 RGD:5130971 NCBI chrNW_004936492:10,185,096...10,244,466 JBrowse link
cellular response to iron ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha ISO RGD PMID:19679821, PMID:23174565 RGD:11341702, RGD:11341808 NCBI chrNW_004936683:2,874,022...2,936,214 JBrowse link
G B2m beta-2-microglobulin ISO (PMID:18353247) BHF-UCL PMID:18353247 NCBI chrNW_004936471:7,646,504...7,655,656 JBrowse link
G Bmp6 bone morphogenetic protein 6 ISO (MGI:MGI:4352622|PMID:19252488) BHF-UCL PMID:19252488 MGI:MGI:4352622 NCBI chrNW_004936534:4,707,658...4,871,865 JBrowse link
G Hfe homeostatic iron regulator ISO (PMID:18353247) BHF-UCL PMID:18353247 NCBI chrNW_004936671:1,940,079...1,947,574 JBrowse link
G Slc11a2 solute carrier family 11 member 2 ISO RGD PMID:17663481 RGD:5688717 NCBI chrNW_004936512:8,590,302...8,622,121 JBrowse link
G Tf transferrin ISO (PMID:18353247) BHF-UCL PMID:18353247 NCBI chrNW_004936529:6,856,042...6,895,989 JBrowse link
G Tfap2a transcription factor AP-2 alpha ISO (PMID:20808827) UniProtKB PMID:20808827 NCBI chrNW_004936534:2,481,804...2,518,573 JBrowse link
G Tfr2 transferrin receptor 2 ISO (PMID:18353247) BHF-UCL PMID:18353247 NCBI chrNW_004936543:667,570...681,872 JBrowse link
cellular response to iron(II) ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpld1 glycosylphosphatidylinositol specific phospholipase D1 ISO PMID:1849823 UniProt PMID:1849823 RGD:8553426 NCBI chrNW_004936671:780,173...827,628 JBrowse link
G Gsk3b glycogen synthase kinase 3 beta ISO RGD PMID:19608791 RGD:10045561 NCBI chrNW_004936536:6,730,070...6,893,818 JBrowse link
cellular response to iron(III) ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2-microglobulin ISO (MGI:MGI:1203460|PMID:9531620) MGI PMID:9531620 MGI:MGI:1203460 NCBI chrNW_004936471:7,646,504...7,655,656 JBrowse link
G Ccnb1 cyclin B1 ISO ferric ammonium citrate RGD PMID:18254965 RGD:2316320 NCBI chrNW_004936480:400,287...407,677 JBrowse link
G Ireb2 iron responsive element binding protein 2 ISO RGD PMID:16135072, PMID:17469137 RGD:12904039, RGD:12904046 NCBI chrNW_004936471:36,547,552...36,601,327 JBrowse link
G Mmp1 matrix metallopeptidase 1 ISO RGD PMID:21683124 RGD:7207286 NCBI chrNW_004936551:5,167,909...5,175,149 JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO RGD PMID:21683124 RGD:7207286 NCBI chrNW_004936514:7,038,240...7,045,873 JBrowse link
cellular response to lead ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alad aminolevulinate dehydratase ISO lead, gallium RGD PMID:16566714 RGD:4144781 NCBI chrNW_004936559:226,481...237,258 JBrowse link
G Anxa5 annexin A5 ISO RGD PMID:11578147 RGD:10053705 NCBI chrNW_004936662:926,302...959,964 JBrowse link
G Atp7a ATPase copper transporting alpha ISO RGD PMID:24316150 RGD:11341684 NCBI chrNW_004936683:2,874,022...2,936,214 JBrowse link
G Cldn1 claudin 1 ISO RGD PMID:17439918 RGD:11344879 NCBI chrNW_004936578:98,489...113,125 JBrowse link
G Dnmt1 DNA methyltransferase 1 ISO RGD PMID:22764079 RGD:9588241 NCBI chrNW_004936659:520,181...565,496 JBrowse link
G Hmbs hydroxymethylbilane synthase ISO RGD PMID:16566714 RGD:4144781 NCBI chrNW_004936542:4,037,888...4,046,089 JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 ISO RGD PMID:25193092 RGD:13207490 NCBI chrNW_004936481:3,821,564...3,828,086 JBrowse link
cellular response to lithium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy7 adenylate cyclase 7 ISO (MGI:MGI:6162268|PMID:18205980) UniProtKB PMID:18205980 MGI:MGI:6162268 NCBI chrNW_004936475:3,368,069...3,393,306 JBrowse link
G Calr calreticulin ISO RGD PMID:16236328 RGD:2326183 NCBI chrNW_004936659:1,994,695...1,999,070 JBrowse link
G Cdh1 cadherin 1 ISO (PMID:12937339) UniProtKB PMID:12937339 NCBI chrNW_004936475:18,990,529...19,065,954 JBrowse link
G Cdkn1b cyclin dependent kinase inhibitor 1B ISO (PMID:19056892) MGI PMID:19056892 NCBI chrNW_004936587:4,573,166...4,578,480 JBrowse link
G Cebpa CCAAT enhancer binding protein alpha ISO (MGI:MGI:3581945|PMID:15673614) MGI PMID:15673614 MGI:MGI:3581945 NCBI chrNW_004936570:2,513,561...2,516,213 JBrowse link
G Ctnnb1 catenin beta 1 ISO RGD PMID:12610652 RGD:10395276 NCBI chrNW_004936473:29,999,542...30,034,610 JBrowse link
G Fabp4 fatty acid binding protein 4 ISO (MGI:MGI:3581945|PMID:15673614) MGI PMID:15673614 MGI:MGI:3581945 NCBI chrNW_004936656:2,722,970...2,727,383 JBrowse link
G Fas Fas cell surface death receptor ISO (MGI:MGI:4829576|PMID:20530871) MGI PMID:20530871 MGI:MGI:4829576 NCBI chrNW_004936735:209,369...234,582 JBrowse link
G Gsk3a glycogen synthase kinase 3 alpha ISO (MGI:MGI:3581945|PMID:15673614) MGI PMID:15673614 MGI:MGI:3581945 NCBI chrNW_004936706:266,462...277,256 JBrowse link
G Gsk3b glycogen synthase kinase 3 beta ISO RGD PMID:18932008 RGD:10045540 NCBI chrNW_004936536:6,730,070...6,893,818 JBrowse link
G Gsta4 glutathione S-transferase alpha 4 ISO RGD PMID:18082333 RGD:2293846 NCBI chrNW_004936476:7,873,218...7,888,301 JBrowse link
G Id2 inhibitor of DNA binding 2 ISO (MGI:MGI:3788965|PMID:18367557) MGI PMID:18367557 MGI:MGI:3788965 NCBI chrNW_004936532:5,236,175...5,238,689 JBrowse link
G Lig4 DNA ligase 4 ISO RGD PMID:19285016 RGD:2317095 NCBI chrNW_004936472:3,861,833...3,867,943 JBrowse link
G Myog myogenin ISO (MGI:MGI:3581945|PMID:15673614) MGI PMID:15673614 MGI:MGI:3581945 NCBI chrNW_004936567:1,507,042...1,509,814 JBrowse link
G Nfatc3 nuclear factor of activated T cells 3 ISO (MGI:MGI:4829576|PMID:20530871) MGI PMID:20530871 MGI:MGI:4829576 NCBI chrNW_004936475:18,462,424...18,557,832 JBrowse link
G Nfatc4 nuclear factor of activated T cells 4 ISO (MGI:MGI:4829576|PMID:20530871) MGI PMID:20530871 MGI:MGI:4829576 NCBI chrNW_004936722:178,866...187,847 JBrowse link
G Nos2 nitric oxide synthase 2 ISO RGD PMID:21994254 RGD:5508722 NCBI chrNW_004936538:4,052,277...4,097,051 JBrowse link
G Nts neurotensin ISO RGD PMID:7898306 RGD:9743905 NCBI chrNW_004936507:3,318,982...3,329,248 JBrowse link
G Pparg peroxisome proliferator activated receptor gamma ISO (MGI:MGI:3581945|PMID:15673614) MGI PMID:15673614 MGI:MGI:3581945 NCBI chrNW_004936602:1,230,907...1,368,588 JBrowse link
G Shh sonic hedgehog signaling molecule ISO (MGI:MGI:3703195|PMID:17284610) MGI PMID:17284610 MGI:MGI:3703195 NCBI chrNW_004936527:10,033,095...10,042,713 JBrowse link
G Slc18a1 solute carrier family 18 member A1 ISO RGD PMID:11080216 RGD:5131196 NCBI chrNW_004936555:4,249,821...4,271,379 JBrowse link
G Tph2 tryptophan hydroxylase 2 ISO RGD PMID:19840776 RGD:2317083 NCBI chrNW_004936568:974,575...1,065,800 JBrowse link
G Xrcc4 X-ray repair cross complementing 4 ISO RGD PMID:19285016 RGD:2317095 NCBI chrNW_004936469:2,248,367...2,495,215 JBrowse link
cellular response to magnesium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank3 ankyrin 3 ISO (MGI:MGI:5613458|PMID:23903368) UniProtKB PMID:23903368 MGI:MGI:5613458 NCBI chrNW_004936614:2,664,594...2,976,174 JBrowse link
G Fbp1 fructose-bisphosphatase 1 ISO (PMID:10222032) UniProtKB PMID:10222032 NCBI chrNW_004936626:3,555,835...3,581,651 JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A ISO RGD PMID:19154422 RGD:2326036 NCBI chrNW_004936530:8,286,101...8,612,183 JBrowse link
G Kcna1 potassium voltage-gated channel subfamily A member 1 ISO (MGI:MGI:5613458|PMID:23903368) UniProtKB PMID:23903368 MGI:MGI:5613458 NCBI chrNW_004937109:142,711...144,257 JBrowse link
G Kcnj1 potassium inwardly rectifying channel subfamily J member 1 ISO RGD PMID:21030597 RGD:7244391 NCBI chrNW_004936572:3,396,329...3,425,848 JBrowse link
G Nos3 nitric oxide synthase 3 ISO RGD PMID:15919495 RGD:7794721 NCBI chrNW_004936527:6,427,147...6,445,770 JBrowse link
G Nr3c1 nuclear receptor subfamily 3 group C member 1 ISO RGD PMID:20350433 RGD:4892212 NCBI chrNW_004936504:10,960,069...11,056,834 JBrowse link
G Slc41a1 solute carrier family 41 member 1 ISO (MGI:MGI:5780542|PMID:15713785)
(PMID:21696366)
ParkinsonsUK-UCL PMID:15713785, PMID:21696366 MGI:MGI:5780542 NCBI chrNW_004936557:6,640,197...6,662,128 JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 ISO (MGI:MGI:5529577|PMID:23973266) MGI PMID:23973266 MGI:MGI:5529577 NCBI chrNW_004936475:18,667,563...18,755,132 JBrowse link
cellular response to manganese ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A3galt2 alpha 1,3-galactosyltransferase 2 ISO RGD PMID:1569388 RGD:13831122 NCBI chrNW_004936474:16,135,076...16,138,930 JBrowse link
G App amyloid beta precursor protein ISO RGD PMID:18583042 RGD:13782134 NCBI chrNW_004936640:1,549,977...1,787,436 JBrowse link
G Atp13a2 ATPase cation transporting 13A2 ISO (PMID:22285144) ParkinsonsUK-UCL PMID:22285144 NCBI chrNW_004936474:3,968,216...3,980,821 JBrowse link
G Atp7b ATPase copper transporting beta ISO RGD PMID:24614235 RGD:11341682 NCBI chrNW_004936565:4,694,294...4,763,661 JBrowse link
G Bace1 beta-secretase 1 ISO RGD PMID:18583042 RGD:13782134 NCBI chrNW_004936542:2,514,297...2,539,088 JBrowse link
G Dbh dopamine beta-hydroxylase ISO RGD PMID:19276553 RGD:5129515 NCBI chrNW_004936669:3,302,014...3,326,233 JBrowse link
G Ddit3 DNA damage inducible transcript 3 ISO PMID:23934647 ParkinsonsUK-UCL PMID:23934647 RGD:10047151 NCBI chrNW_004936646:1,665,019...1,669,212 JBrowse link
G Ern1 endoplasmic reticulum to nucleus signaling 1 ISO PMID:23934647 ParkinsonsUK-UCL PMID:23934647 RGD:10047151 NCBI chrNW_004936541:4,613,197...4,705,911 JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 ISO RGD PMID:19643132 RGD:2325970 NCBI chrNW_004936669:814,330...838,881 JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A ISO RGD PMID:19643132 RGD:2325970 NCBI chrNW_004936530:8,286,101...8,612,183 JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B ISO RGD PMID:19643132 RGD:2325970 NCBI chrNW_004936587:3,406,055...3,806,956 JBrowse link
G Hsp90b1 heat shock protein 90 beta family member 1 ISO PMID:23934647 ParkinsonsUK-UCL PMID:23934647 RGD:10047151 NCBI chrNW_004936492:10,513,908...10,528,281 JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 ISO PMID:23934647 ParkinsonsUK-UCL PMID:23934647 RGD:10047151 NCBI chrNW_004936487:13,348,465...13,352,717 JBrowse link
G Ireb2 iron responsive element binding protein 2 ISO RGD PMID:16568477, PMID:17469137 RGD:12904039, RGD:12904041 NCBI chrNW_004936471:36,547,552...36,601,327 JBrowse link
G Lrrk2 leucine rich repeat kinase 2 ISO (PMID:23628791) ParkinsonsUK-UCL PMID:23628791 NCBI chrNW_004936607:628,469...761,117 JBrowse link
G Mfn2 mitofusin 2 ISO RGD PMID:28232070 RGD:12910738 NCBI chrNW_004936474:767,754...795,258 JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO RGD PMID:19781568 RGD:5130971 NCBI chrNW_004936489:12,118,538...12,913,664 JBrowse link
G Th tyrosine hydroxylase ISO RGD PMID:19781568 RGD:5130971 NCBI chrNW_004936794:478,651...486,887 JBrowse link
cellular response to mercury ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 (Colton blood group) ISO (PMID:12172703), (PMID:12745312), (PMID:7491270), (PMID:8584435), (PMID:9321919) UniProtKB PMID:7491270, PMID:8584435, PMID:9321919, PMID:12172703, PMID:12745312 NCBI chrNW_004936478:7,146,997...7,160,369 JBrowse link
G Aqp2 aquaporin 2 ISO (PMID:8584435) UniProtKB PMID:8584435 NCBI chrNW_004936512:7,628,677...7,633,344 JBrowse link
G Fn1 fibronectin 1 ISO RGD PMID:11768240 RGD:729934 NCBI chrNW_004936586:1,708,803...1,773,372 JBrowse link
G Il4 interleukin 4 ISO RGD PMID:7657819, PMID:19604304 RGD:2317279, RGD:2317674 NCBI chrNW_004936647:2,510,457...2,518,576 JBrowse link
G Ube2d3 ubiquitin conjugating enzyme E2 D3 ISO RGD PMID:24212999 RGD:13830869 NCBI chrNW_004936520:555,878...588,052 JBrowse link
cellular response to metal ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd86 CD86 molecule ISO titanium oxide particles RGD PMID:19653805 RGD:4892213 NCBI chrNW_004936536:8,414,491...8,481,712 JBrowse link
G Fstl3 follistatin like 3 ISO potassium RGD PMID:14692692 RGD:1302294 NCBI chrNW_004936588:250,359...255,922 JBrowse link
G Hsd17b1 hydroxysteroid 17-beta dehydrogenase 1 ISO hexavalent chromium RGD PMID:18602937 RGD:4890967 NCBI chrNW_004936490:17,312,390...17,314,423 JBrowse link
G Hsd17b2 hydroxysteroid 17-beta dehydrogenase 2 ISO hexavalent chromium RGD PMID:18602937 RGD:4890967 NCBI chrNW_004936475:29,426,922...29,494,215 JBrowse link
G Nqo1 NAD(P)H quinone dehydrogenase 1 ISO lanthanum RGD PMID:28722058 RGD:13439714 NCBI chrNW_004936475:19,771,384...19,785,034 JBrowse link
G Serpine1 serpin family E member 1 ISO barium RGD PMID:21596853 RGD:8547918 NCBI chrNW_004936543:1,032,543...1,040,956 JBrowse link
G Slc34a1 solute carrier family 34 member 1 ISO uranium RGD PMID:16476458 RGD:7243141 NCBI chrNW_004936597:1,667,700...1,684,533 JBrowse link
G Star steroidogenic acute regulatory protein ISO hexavalent chromium RGD PMID:18602937 RGD:4890967 NCBI chrNW_004936710:1,523,289...1,530,181 JBrowse link
cellular response to potassium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1h calcium voltage-gated channel subunit alpha1 H ISO (PMID:19342457) UniProtKB PMID:19342457 NCBI chrNW_004936694:2,702,224...2,724,574 JBrowse link
G Carf calcium responsive transcription factor ISO (PMID:22174809) UniProtKB PMID:22174809 NCBI chrNW_004936726:1,958,561...2,010,972 JBrowse link
G Crhbp corticotropin releasing hormone binding protein ISO (PMID:21624661) UniProtKB PMID:21624661 NCBI chrNW_004936549:64,866...78,272 JBrowse link
G Dlg2 discs large MAGUK scaffold protein 2 ISO (MGI:MGI:5703671|PMID:26609151) ARUK-UCL PMID:26609151 MGI:MGI:5703671 NCBI chrNW_004936498:11,549,526...13,519,638 JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 ISO (MGI:MGI:5703671|PMID:26609151) ARUK-UCL PMID:26609151 MGI:MGI:5703671 NCBI chrNW_004936595:487,918...513,843 JBrowse link
G Fmr1 FMRP translational regulator 1 ISO RGD PMID:15028757 RGD:1300188 NCBI chrNW_004936513:1,290,038...1,327,850 JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 ISO RGD PMID:17298175 RGD:10045993 NCBI chrNW_004936512:11,481,017...11,487,737 JBrowse link
G Hsf1 heat shock transcription factor 1 ISO RGD PMID:24478344 RGD:10402566 NCBI chrNW_004936470:7,927,734...7,950,805 JBrowse link
G Mecp2 methyl-CpG binding protein 2 ISO RGD PMID:14593183 RGD:12790707 NCBI chrNW_004936809:902,938...967,771 JBrowse link
G Mylk myosin light chain kinase ISO (MGI:MGI:3805620|PMID:18524939) MGI PMID:18524939 MGI:MGI:3805620 NCBI chrNW_004936725:1,418,930...1,594,697 JBrowse link
G Nptx1 neuronal pentraxin 1 ISO RGD PMID:22279230 RGD:6903322 NCBI chrNW_004936594:4,373,500...4,384,394 JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO RGD PMID:17870059 RGD:10059655 NCBI chrNW_004936477:4,881,230...5,488,208 JBrowse link
G Serpine1 serpin family E member 1 ISO RGD PMID:21596853 RGD:8547918 NCBI chrNW_004936543:1,032,543...1,040,956 JBrowse link
G Slc12a2 solute carrier family 12 member 2 ISO (MGI:MGI:6392919|PMID:11940530) ARUK-UCL PMID:11940530 MGI:MGI:6392919 NCBI chrNW_004936504:1,378,812...1,465,463 JBrowse link
G Sod1 superoxide dismutase 1 ISO RGD PMID:17403136 RGD:8657024 NCBI chrNW_004936500:10,345,154...10,352,873 JBrowse link
cellular response to zinc ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Creb1 cAMP responsive element binding protein 1 ISO (MGI:MGI:5492261|PMID:23716681) MGI PMID:23716681 MGI:MGI:5492261 NCBI chrNW_004936631:3,721,307...3,785,346 JBrowse link
G Glra1 glycine receptor alpha 1 ISO (PMID:16144831) UniProtKB PMID:16144831 NCBI chrNW_004936515:10,816,712...10,896,958 JBrowse link
G Glra2 glycine receptor alpha 2 ISO (PMID:23895467) UniProtKB PMID:23895467 NCBI chrNW_004936470:4,014,897...4,202,625 JBrowse link
G Glra3 glycine receptor alpha 3 ISO PMID:23895467 UniProt PMID:23895467 RGD:11035333 NCBI chrNW_004936516:5,692,535...5,855,694 JBrowse link
G Gpr39 G protein-coupled receptor 39 ISO (MGI:MGI:5707553|PMID:26375174)
(MGI:MGI:5464224|PMID:23133519)
MGI PMID:23133519, PMID:26375174 MGI:MGI:5464224, MGI:MGI:5707553 NCBI chrNW_004936469:55,973,001...55,974,070 JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A ISO RGD PMID:19240037 RGD:2326029 NCBI chrNW_004936530:8,286,101...8,612,183 JBrowse link
G Hvcn1 hydrogen voltage gated channel 1 ISO (PMID:22020278) UniProtKB PMID:22020278 NCBI chrNW_004936558:3,581,409...3,609,714 JBrowse link
G Kcnk3 potassium two pore domain channel subfamily K member 3 ISO RGD PMID:9437008 RGD:61647 NCBI chrNW_004936493:5,767,779...5,772,043 JBrowse link
G Mtf1 metal regulatory transcription factor 1 ISO (MGI:MGI:5577232|PMID:24529376) UniProt PMID:24529376 MGI:MGI:5577232 NCBI chrNW_004936474:19,981,483...20,027,541 JBrowse link
G P2rx4 purinergic receptor P2X 4 ISO PMID:8551329 UniProt PMID:8551329 RGD:61682 NCBI chrNW_004936558:3,062,279...3,077,493 JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 ISO RGD PMID:23582235 RGD:10414068 NCBI chrNW_004936526:3,102,468...3,147,601 JBrowse link
G Tspo translocator protein ISO RGD PMID:18709649 RGD:2317141 NCBI chrNW_004936718:992,301...995,172 JBrowse link
G Znf658 zinc finger protein 658 ISO (PMID:25582195) UniProtKB PMID:25582195 NCBI chrNW_004936487:1,494,915...1,509,548 JBrowse link
detection of calcium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calm2 calmodulin 2 ISO (PMID:23040497) BHF-UCL PMID:23040497 NCBI chrNW_004936508:5,207,909...5,223,780 JBrowse link
G Calm3 calmodulin 3 ISO (PMID:23040497) BHF-UCL PMID:23040497 NCBI chrNW_004936664:471,446...480,858 JBrowse link
G Casr calcium sensing receptor ISO (PMID:27434672) RGD
UniProtKB
PMID:7816802, PMID:27434672 RGD:1298562 NCBI chrNW_004936536:8,574,064...8,599,446 JBrowse link
G Kcnmb2 potassium calcium-activated channel subfamily M regulatory beta subunit 2 ISO (PMID:10692449) UniProtKB PMID:10692449 NCBI chrNW_004936566:4,219,377...4,462,459 JBrowse link
G Kcnmb3 potassium calcium-activated channel subfamily M regulatory beta subunit 3 ISO (PMID:10692449) UniProtKB PMID:10692449 NCBI chrNW_004936566:3,903,272...3,918,741 JBrowse link
G Kcnmb4 potassium calcium-activated channel subfamily M regulatory beta subunit 4 ISO (PMID:10692449) UniProtKB PMID:10692449 NCBI chrNW_004936545:8,052,407...8,115,310 JBrowse link
G LOC101967074 calmodulin ISO (PMID:23040497) BHF-UCL PMID:23040497 NCBI chrNW_004936488:17,580,425...17,588,480 JBrowse link
G Ryr2 ryanodine receptor 2 ISO (PMID:10830164) BHF-UCL PMID:10830164 NCBI chrNW_004936484:15,402,488...15,825,410 JBrowse link
G Stim1 stromal interaction molecule 1 ISO (PMID:16005298) UniProtKB PMID:16005298 NCBI chrNW_004936498:849,775...1,063,552 JBrowse link
G Syt1 synaptotagmin 1 ISO RGD PMID:22229667 RGD:7205654 NCBI chrNW_004936698:65,210...575,538 JBrowse link
detoxification of cadmium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc30a1 solute carrier family 30 member 1 ISO PMID:16741752 BHF-UCL PMID:16741752 RGD:8554228 NCBI chrNW_004936557:1,789,263...1,796,548 JBrowse link
detoxification of copper ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha ISO (MGI:MGI:65135|PMID:7509170) MGI PMID:7509170 MGI:MGI:65135 NCBI chrNW_004936683:2,874,022...2,936,214 JBrowse link
G Park7 Parkinsonism associated deglycase ISO (PMID:23792957)
(MGI:MGI:5516159|PMID:23792957)
UniProtKB PMID:23792957 MGI:MGI:5516159 NCBI chrNW_004936623:2,422,780...2,436,817 JBrowse link
detoxification of mercury ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc2 ATP binding cassette subfamily C member 2 ISO RGD PMID:23059061 RGD:14700809 NCBI chrNW_004936636:292,631...341,999 JBrowse link
G Park7 Parkinsonism associated deglycase ISO (PMID:23792957)
(MGI:MGI:5516159|PMID:23792957)
UniProtKB PMID:23792957 MGI:MGI:5516159 NCBI chrNW_004936623:2,422,780...2,436,817 JBrowse link
mercury ion transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc2 ATP binding cassette subfamily C member 2 ISO RGD PMID:21134393 RGD:11081013 NCBI chrNW_004936636:292,631...341,999 JBrowse link
positive regulation of transcription from RNA polymerase II promoter in response to calcium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Carf calcium responsive transcription factor ISO (PMID:11832226), (PMID:22174809) UniProtKB
UniProt
PMID:11832226, PMID:22174809 RGD:8553337 NCBI chrNW_004936726:1,958,561...2,010,972 JBrowse link
regulation of cellular response to manganese ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc30a10 solute carrier family 30 member 10 ISO (PMID:25319704) UniProtKB PMID:25319704 NCBI chrNW_004936650:2,252,554...2,267,990 JBrowse link
regulation of response to calcium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein ISO PMID:11404397 ARUK-UCL PMID:11404397 RGD:12790656 NCBI chrNW_004936640:1,549,977...1,787,436 JBrowse link
regulation of transcription from RNA polymerase II promoter in response to iron term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmox1 heme oxygenase 1 ISO (MGI:MGI:5527134|PMID:23395172) MGI PMID:23395172 MGI:MGI:5527134 NCBI chrNW_004936492:5,042,353...5,049,216 JBrowse link
G Hrg histidine rich glycoprotein ISO (MGI:MGI:5527134|PMID:23395172) MGI PMID:23395172 MGI:MGI:5527134 NCBI chrNW_004936578:3,285,986...3,295,876 JBrowse link
G Slc40a1 solute carrier family 40 member 1 ISO (MGI:MGI:5527134|PMID:23395172) MGI PMID:23395172 MGI:MGI:5527134 NCBI chrNW_004936506:8,396,593...8,415,069 JBrowse link
response to aluminum ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alad aminolevulinate dehydratase ISO RGD PMID:518129 RGD:4144207 NCBI chrNW_004936559:226,481...237,258 JBrowse link
G Bcl2 BCL2 apoptosis regulator ISO RGD PMID:17967740 RGD:2293066 NCBI chrNW_004936497:2,209,136...2,373,580 JBrowse link
G Glud1 glutamate dehydrogenase 1 ISO RGD PMID:10806405 RGD:6484591 NCBI chrNW_004936601:5,415,857...5,435,964 JBrowse link
G Lonp1 lon peptidase 1, mitochondrial ISO RGD PMID:19010380 RGD:2303407 NCBI chrNW_004936588:3,265,344...3,287,035 JBrowse link
G Maob monoamine oxidase B ISO RGD PMID:19526156 RGD:2316688 NCBI chrNW_004936502:9,907,181...10,014,756 JBrowse link
G Nt5e 5'-nucleotidase ecto ISO RGD PMID:17686601 RGD:5134345 NCBI chrNW_004936510:5,797,218...5,846,118 JBrowse link
G Plcd1 phospholipase C delta 1 ISO RGD PMID:10814511 RGD:2300432 NCBI chrNW_004936473:27,364,404...27,387,337 JBrowse link
G Qdpr quinoid dihydropteridine reductase ISO scandium, gallium RGD PMID:3477172 RGD:5128605 NCBI chrNW_004936477:10,687,328...10,708,015 JBrowse link
G Xdh xanthine dehydrogenase ISO RGD PMID:11787993 RGD:730193 NCBI chrNW_004936493:1,762,814...1,824,501 JBrowse link
response to cadmium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1 ATP binding cassette subfamily B member 1 ISO RGD PMID:17136310 RGD:1598557 NCBI chrNW_004936763:1,225,355...1,308,257 JBrowse link
G Alad aminolevulinate dehydratase ISO RGD PMID:7896311, PMID:20019094 RGD:1599018, RGD:4144138 NCBI chrNW_004936559:226,481...237,258 JBrowse link
G Arg2 arginase 2 ISO RGD PMID:16570515 RGD:4143188 NCBI chrNW_004936495:11,004,296...11,045,467 JBrowse link
G B2m beta-2-microglobulin ISO RGD PMID:17327699 RGD:2293801 NCBI chrNW_004936471:7,646,504...7,655,656 JBrowse link
G Bdh1 3-hydroxybutyrate dehydrogenase 1 ISO RGD PMID:9343363 RGD:2611154 NCBI chrNW_004936833:367,790...409,966 JBrowse link
G Camk2b calcium/calmodulin dependent protein kinase II beta ISO (MGI:MGI:3710042|PMID:17367784) MGI PMID:17367784 MGI:MGI:3710042 NCBI chrNW_004936478:19,183,493...19,278,457 JBrowse link
G Cat catalase ISO RGD PMID:18655190 RGD:9068930 NCBI chrNW_004936533:3,601,270...3,637,128 JBrowse link
G Cdk1 cyclin dependent kinase 1 ISO RGD PMID:16730872 RGD:2293566 NCBI chrNW_004936614:2,300,682...2,313,611 JBrowse link
G Cdk2 cyclin dependent kinase 2 ISO RGD PMID:16730872 RGD:2293566 NCBI chrNW_004936646:379,849...385,648 JBrowse link
G Cdkn1b cyclin dependent kinase inhibitor 1B ISO RGD PMID:16730872 RGD:2293566 NCBI chrNW_004936587:4,573,166...4,578,480 JBrowse link
G Ctnnb1 catenin beta 1 ISO RGD PMID:17136310 RGD:1598557 NCBI chrNW_004936473:29,999,542...30,034,610 JBrowse link
G Dtymk deoxythymidylate kinase ISO RGD PMID:223769 RGD:5133685 NCBI chrNW_004936745:282,199...289,273 JBrowse link
G Ece1 endothelin converting enzyme 1 ISO RGD PMID:12189509 RGD:7244161 NCBI chrNW_004936474:7,034,134...7,083,005 JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit ISO RGD PMID:25729986 RGD:13207321 NCBI chrNW_004936706:1,854,938...1,867,521 JBrowse link
G Gclc glutamate-cysteine ligase catalytic subunit ISO RGD PMID:10702364 RGD:10402382 NCBI chrNW_004936476:7,371,270...7,418,756 JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1 ISO RGD PMID:29101047 RGD:13504825 NCBI chrNW_004936636:617,376...640,424 JBrowse link
G Gpam glycerol-3-phosphate acyltransferase, mitochondrial ISO RGD PMID:17066326 RGD:2313663 NCBI chrNW_004936486:2,754,753...2,823,600 JBrowse link
G Gpi glucose-6-phosphate isomerase ISO RGD PMID:10536756 RGD:11051961 NCBI chrNW_004936570:1,582,120...1,608,537 JBrowse link
G Gsr glutathione-disulfide reductase ISO RGD PMID:24758558 RGD:11059510 NCBI chrNW_004936792:531,076...579,083 JBrowse link
G Gss glutathione synthetase ISO (MGI:MGI:81780|PMID:8660701) MGI PMID:8660701 MGI:MGI:81780 NCBI chrNW_004936561:5,765,637...5,793,951 JBrowse link
G Haao 3-hydroxyanthranilate 3,4-dioxygenase ISO (PMID:12007609) UniProtKB PMID:12007609 NCBI chrNW_004936508:8,971,516...8,987,235 JBrowse link
G Hsd17b3 hydroxysteroid 17-beta dehydrogenase 3 ISO RGD PMID:20957662 RGD:4890460 NCBI chrNW_004936487:228,301...282,495 JBrowse link
G Kit KIT proto-oncogene, receptor tyrosine kinase ISO RGD PMID:24462979 RGD:12910750 NCBI chrNW_004936482:17,162,854...17,238,319 JBrowse link
G LOC101960314 cytochrome b5 ISO RGD PMID:14595535 RGD:1599661 NCBI chrNW_004936616:4,176,576...4,210,276 JBrowse link
G LOC101975820 cholesterol side-chain cleavage enzyme, mitochondrial ISO RGD PMID:15223132 RGD:1599710 NCBI chrNW_004936471:33,367,810...33,380,764 JBrowse link
G Mapk8 mitogen-activated protein kinase 8 ISO (MGI:MGI:3619752|PMID:16458303) MGI PMID:16458303 MGI:MGI:3619752 NCBI chrNW_004936728:1,775,746...1,893,895 JBrowse link
G Mapk9 mitogen-activated protein kinase 9 ISO (MGI:MGI:3619752|PMID:16458303) MGI PMID:16458303 MGI:MGI:3619752 NCBI chrNW_004936739:551,678...602,027 JBrowse link
G Mfn2 mitofusin 2 ISO RGD PMID:25388156 RGD:13204797 NCBI chrNW_004936474:767,754...795,258 JBrowse link
G Mtf1 metal regulatory transcription factor 1 ISO (MGI:MGI:1266982|PMID:9582278) MGI PMID:9582278 MGI:MGI:1266982 NCBI chrNW_004936474:19,981,483...20,027,541 JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 ISO RGD PMID:12890491 RGD:632349 NCBI chrNW_004936550:2,983,172...3,032,222 JBrowse link
G Nudt1 nudix hydrolase 1 ISO RGD PMID:11817101 RGD:633232 NCBI chrNW_004936823:7,104...22,083 JBrowse link
G Pcna proliferating cell nuclear antigen ISO RGD PMID:15638412 RGD:2315016 NCBI chrNW_004936485:13,766,221...13,771,215 JBrowse link
G Prnp prion protein ISO RGD PMID:16148034 RGD:1599958 NCBI chrNW_004936485:14,104,829...14,118,614 JBrowse link
G Pth parathyroid hormone ISO RGD PMID:22708652 RGD:7242891 NCBI chrNW_004936528:5,081,569...5,084,030 JBrowse link
G Slc11a2 solute carrier family 11 member 2 ISO RGD PMID:19083094 RGD:2311406 NCBI chrNW_004936512:8,590,302...8,622,121 JBrowse link
G Slc34a1 solute carrier family 34 member 1 ISO (PMID:8898024) UniProtKB PMID:8898024 NCBI chrNW_004936597:1,667,700...1,684,533 JBrowse link
G Sod2 superoxide dismutase 2 ISO RGD PMID:20107868 RGD:2317377 NCBI chrNW_004936489:11,178,338...11,191,601 JBrowse link
G Sord sorbitol dehydrogenase ISO RGD PMID:10620479 RGD:1601368 NCBI chrNW_004936471:7,760,097...7,805,475 JBrowse link
G Sparc secreted protein acidic and cysteine rich ISO RGD PMID:9232954 RGD:2300068 NCBI chrNW_004936515:11,026,156...11,046,812 JBrowse link
G Tert telomerase reverse transcriptase ISO RGD PMID:21181359 RGD:11038678 NCBI chrNW_004936815:468,987...492,666 JBrowse link
response to calcium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aanat aralkylamine N-acetyltransferase ISO RGD PMID:16282194 RGD:2301038 NCBI chrNW_004936594:1,556,303...1,559,198 JBrowse link
G Actg1 actin gamma 1 ISO RGD PMID:8476030 RGD:1598730 NCBI chrNW_004936594:5,170,711...5,173,251 JBrowse link
G Adam9 ADAM metallopeptidase domain 9 ISO (PMID:11162558) BHF-UCL PMID:11162558 NCBI chrNW_004936710:2,301,470...2,388,533 JBrowse link
G Ahcyl1 adenosylhomocysteinase like 1 ISO (PMID:18829453) UniProtKB PMID:18829453 NCBI chrNW_004936704:1,438,781...1,477,541 JBrowse link
G Alg2 ALG2 alpha-1,3/1,6-mannosyltransferase ISO (PMID:12445460), (PMID:17196169) UniProtKB PMID:12445460, PMID:17196169 NCBI chrNW_004936524:7,725,444...7,730,869 JBrowse link
G Amelx amelogenin X-linked ISO RGD PMID:15721149 RGD:1599092 NCBI chrNW_004936470:1,169,906...1,174,166 JBrowse link
G Anxa11 annexin A11 ISO (PMID:12601007), (PMID:9188810) UniProtKB PMID:9188810, PMID:12601007 NCBI chrNW_004936521:231,294...275,138 JBrowse link
G Anxa5 annexin A5 ISO RGD PMID:8362244 RGD:7241859 NCBI chrNW_004936662:926,302...959,964 JBrowse link
G Anxa7 annexin A7 ISO RGD PMID:12526883 RGD:634602 NCBI chrNW_004936521:5,639,193...5,671,369 JBrowse link
G Aqp2 aquaporin 2 ISO RGD PMID:19138132 RGD:2313121 NCBI chrNW_004936512:7,628,677...7,633,344 JBrowse link
G Bad BCL2 associated agonist of cell death ISO RGD PMID:17663748 RGD:2292686 NCBI chrNW_004936599:4,924,349...4,933,683 JBrowse link
G Cacng2 calcium voltage-gated channel auxiliary subunit gamma 2 ISO RGD PMID:21256931 RGD:13515072 NCBI chrNW_004936492:4,125,182...4,232,239 JBrowse link
G Calm2 calmodulin 2 ISO (PMID:7607248) BHF-UCL PMID:7607248 NCBI chrNW_004936508:5,207,909...5,223,780 JBrowse link
G Calm3 calmodulin 3 ISO (PMID:7607248) BHF-UCL PMID:7607248 NCBI chrNW_004936664:471,446...480,858 JBrowse link
G Capn3 calpain 3 ISO RGD PMID:11904300 RGD:1600775 NCBI chrNW_004936471:5,667,839...5,711,822 JBrowse link
G Casr calcium sensing receptor ISO RGD PMID:20431039 RGD:7205500 NCBI chrNW_004936536:8,574,064...8,599,446 JBrowse link
G Cav1 caveolin 1 ISO (MGI:MGI:3837270|PMID:19052258) BHF-UCL PMID:19052258 MGI:MGI:3837270 NCBI chrNW_004936589:2,504,235...2,536,778 JBrowse link
G Clcnka chloride voltage-gated channel Ka ISO RGD PMID:7814604 RGD:2313585 NCBI chrNW_004936474:3,591,134...3,601,562 JBrowse link
G D2hgdh D-2-hydroxyglutarate dehydrogenase NOT ISO PMID:15070399 HGNC PMID:15070399 RGD:8553974 NCBI chrNW_004936745:208,510...234,056 JBrowse link
G Dusp1 dual specificity phosphatase 1 ISO RGD PMID:11423551 RGD:628467 NCBI chrNW_004936609:2,688,170...2,691,057 JBrowse link
G Egfr epidermal growth factor receptor ISO RGD PMID:15950968 RGD:1581907 NCBI chrNW_004936678:365,005...560,546 JBrowse link
G Entpd6 ectonucleoside triphosphate diphosphohydrolase 6 ISO RGD PMID:11042118 RGD:727304 NCBI chrNW_004936620:598,677...627,766 JBrowse link
G Ep300 E1A binding protein p300 ISO RGD PMID:16000154 RGD:2289914 NCBI chrNW_004936492:696,982...778,132 JBrowse link
G Fga fibrinogen alpha chain ISO (PMID:6777381) BHF-UCL PMID:6777381 NCBI chrNW_004936576:1,322,406...1,329,743 JBrowse link
G Fgb fibrinogen beta chain ISO (PMID:6777381) BHF-UCL PMID:6777381 NCBI chrNW_004936576:1,306,076...1,313,485 JBrowse link
G Fgg fibrinogen gamma chain ISO (PMID:6777381) BHF-UCL PMID:6777381 NCBI chrNW_004936576:1,343,657...1,352,085 JBrowse link
G Gdi1 GDP dissociation inhibitor 1 ISO RGD PMID:12426384 RGD:632546 NCBI chrNW_004936809:1,188,793...1,194,816 JBrowse link
G Gipr gastric inhibitory polypeptide receptor ISO RGD PMID:9705086 RGD:2312608 NCBI chrNW_004936706:2,052,069...2,062,722 JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 ISO RGD PMID:19761817 RGD:2325954 NCBI chrNW_004936669:814,330...838,881 JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A ISO RGD PMID:19761817 RGD:2325954 NCBI chrNW_004936530:8,286,101...8,612,183 JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B ISO RGD PMID:19761817 RGD:2325954 NCBI chrNW_004936587:3,406,055...3,806,956 JBrowse link
G Hcn1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 ISO RGD PMID:19008224 RGD:9686142 NCBI chrNW_004936480:17,051,902...17,416,335 JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D ISO RGD PMID:18583400 RGD:10041065 NCBI chrNW_004936738:2,096,370...2,115,135 JBrowse link
G Homer1 homer scaffold protein 1 ISO (PMID:14505576) BHF-UCL PMID:14505576 NCBI chrNW_004936549:7,189,588...7,320,117 JBrowse link
G Htt huntingtin ISO (MGI:MGI:3582129|PMID:15935052) MGI PMID:15935052 MGI:MGI:3582129 NCBI chrNW_004936477:20,443,101...20,577,167 JBrowse link
G Itpr3 inositol 1,4,5-trisphosphate receptor type 3 ISO (PMID:19052258) BHF-UCL PMID:19052258 NCBI chrNW_004936476:25,254,937...25,318,316 JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 ISO (PMID:12388065), (PMID:18458941) RGD
UniProtKB
PMID:12388065, PMID:15111404, PMID:18458941 RGD:1581585 NCBI chrNW_004936521:2,000,113...2,706,010 JBrowse link
G Kcnmb1 potassium calcium-activated channel subfamily M regulatory beta subunit 1 ISO RGD PMID:9888999 RGD:69871 NCBI chrNW_004936609:4,451,526...4,458,665 JBrowse link
G Lipc lipase C, hepatic type ISO RGD PMID:9480878 RGD:2308764 NCBI chrNW_004936471:19,604,083...19,733,721 JBrowse link
G LOC101965031 protocadherin-15 ISO RGD PMID:19008224 RGD:9686142 NCBI chrNW_004936910:233,800...602,145 JBrowse link
G LOC101967074 calmodulin ISO (PMID:7607248) BHF-UCL PMID:7607248 NCBI chrNW_004936488:17,580,425...17,588,480 JBrowse link
G LOC101978323 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial ISO RGD PMID:8333523 RGD:2307320 NCBI chrNW_004936646:1,899,686...1,904,104 JBrowse link
G Mfn1 mitofusin 1 ISO RGD PMID:25308841 RGD:13204805 NCBI chrNW_004936566:3,737,315...3,775,894 JBrowse link
G Mfn2 mitofusin 2 ISO RGD PMID:25308841 RGD:13204805 NCBI chrNW_004936474:767,754...795,258 JBrowse link
G Mgp matrix Gla protein ISO RGD PMID:11062022 RGD:1582509 NCBI chrNW_004936587:2,601,419...2,605,848 JBrowse link
G Mnat1 MNAT1 component of CDK activating kinase ISO (MGI:MGI:3770112|PMID:17276355) MGI PMID:17276355 MGI:MGI:3770112 NCBI chrNW_004936495:4,909,427...5,128,113 JBrowse link
G Mttp microsomal triglyceride transfer protein ISO RGD PMID:16651714 RGD:1625484 NCBI chrNW_004936520:3,337,726...3,417,818 JBrowse link
G Nppb natriuretic peptide B ISO RGD PMID:17332063 RGD:1642264 NCBI chrNW_004936474:683,325...684,662 JBrowse link
G Nr3c1 nuclear receptor subfamily 3 group C member 1 ISO RGD PMID:22142627 RGD:5686280 NCBI chrNW_004936504:10,960,069...11,056,834 JBrowse link
G P2rx7 purinergic receptor P2X 7 ISO (MGI:MGI:3051178|PMID:15240711)
(MGI:MGI:3583830|PMID:15978588), (MGI:MGI:3772417|PMID:18082965)
MGI PMID:15240711, PMID:15978588, PMID:18082965 MGI:MGI:3051178, MGI:MGI:3583830, MGI:MGI:3772417 NCBI chrNW_004936558:3,106,819...3,149,689 JBrowse link
G Pcsk1 proprotein convertase subtilisin/kexin type 1 ISO RGD PMID:9556596 RGD:2308914 NCBI chrNW_004936523:7,009,966...7,050,300 JBrowse link
G Pdcd6 programmed cell death 6 ISO (MGI:MGI:3763292|PMID:17214967) UniProtKB PMID:17214967 MGI:MGI:3763292 NCBI chrNW_004936815:1,129,367...1,144,020 JBrowse link
G Pde1c phosphodiesterase 1C ISO PMID:7568196 MGI PMID:7568196 RGD:68318 NCBI chrNW_004936478:7,900,432...8,499,300 JBrowse link
G Pebp1 phosphatidylethanolamine binding protein 1 ISO RGD PMID:10622376 RGD:2302808 NCBI chrNW_004936668:2,316,661...2,323,015 JBrowse link
G Pef1 penta-EF-hand domain containing 1 ISO (PMID:11278427) UniProtKB PMID:11278427 NCBI chrNW_004936474:14,745,812...14,761,279 JBrowse link
G Penk proenkephalin ISO RGD PMID:10426412 RGD:10002788 NCBI chrNW_004936496:3,016,247...3,021,726 JBrowse link
G Pla2g4a phospholipase A2 group IVA ISO RGD PMID:16828086 RGD:1642455 NCBI chrNW_004936481:3,559,377...3,689,797 JBrowse link
G Plcd1 phospholipase C delta 1 ISO RGD PMID:10473563 RGD:2301014 NCBI chrNW_004936473:27,364,404...27,387,337 JBrowse link
G Ppp3ca protein phosphatase 3 catalytic subunit alpha ISO (PMID:18815128) UniProtKB PMID:18815128 NCBI chrNW_004936520:1,987,989...2,146,473 JBrowse link
G Ptges prostaglandin E synthase ISO RGD PMID:16598755 RGD:2300097 NCBI chrNW_004936487:16,959,263...16,968,909 JBrowse link
G Ptk2b protein tyrosine kinase 2 beta ISO RGD PMID:16120467, PMID:16945503 RGD:1642613, RGD:1642620 NCBI chrNW_004936675:216,970...325,670 JBrowse link
G Ranbp1 RAN binding protein 1 ISO RGD PMID:18667152 RGD:9835000 NCBI chrNW_004936619:4,021,751...4,028,208 JBrowse link
G Ryr2 ryanodine receptor 2 ISO RGD PMID:17027851 RGD:1599247 NCBI chrNW_004936484:15,402,488...15,825,410 JBrowse link
G S100a16 S100 calcium binding protein A16 ISO (MGI:MGI:3697052|PMID:17030513) MGI PMID:17030513 MGI:MGI:3697052 NCBI chrNW_004936580:3,407,044...3,413,277 JBrowse link
G Sdc1 syndecan 1 ISO RGD PMID:12135485 RGD:625750 NCBI chrNW_004936493:11,177,804...11,199,678 JBrowse link
G Sec31a SEC31 homolog A, COPII coat complex component ISO (PMID:17196169) UniProtKB PMID:17196169 NCBI chrNW_004936738:1,664,916...1,741,739 JBrowse link
G Slc25a12 solute carrier family 25 member 12 ISO (PMID:11566871) UniProtKB PMID:11566871 NCBI chrNW_004936509:1,994,082...2,077,731 JBrowse link
G Slc25a13 solute carrier family 25 member 13 ISO (PMID:11566871) UniProtKB PMID:11566871 NCBI chrNW_004936585:4,061,297...4,215,912 JBrowse link
G Slc6a1 solute carrier family 6 member 1 ISO RGD PMID:15778221 RGD:1643203 NCBI chrNW_004936602:2,359,151...2,397,346 JBrowse link
G Sparc secreted protein acidic and cysteine rich ISO RGD PMID:11897705 RGD:2300059 NCBI chrNW_004936515:11,026,156...11,046,812 JBrowse link
G Sucnr1 succinate receptor 1 ISO (MGI:MGI:3801546|PMID:18535668) MGI PMID:18535668 MGI:MGI:3801546 NCBI chrNW_004936519:86,649...97,633 JBrowse link
G Syt1 synaptotagmin 1 ISO RGD PMID:18508778 RGD:7241021 NCBI chrNW_004936698:65,210...575,538 JBrowse link
G Syt3 synaptotagmin 3 ISO RGD PMID:18508778 RGD:7241021 NCBI chrNW_004936889:404,534...411,885 JBrowse link
G Thbs1 thrombospondin 1 ISO (PMID:18757424), (PMID:6777381) BHF-UCL PMID:6777381, PMID:18757424 NCBI chrNW_004936471:3,064,466...3,081,125 JBrowse link
G Tnnt2 troponin T2, cardiac type ISO (PMID:2530435)
(PMID:8205619)
UniProtKB PMID:2530435, PMID:8205619 NCBI chrNW_004936567:3,052,167...3,069,077 JBrowse link
G Tph2 tryptophan hydroxylase 2 ISO RGD PMID:17868301 RGD:2317090 NCBI chrNW_004936568:974,575...1,065,800 JBrowse link
G Trpc1 transient receptor potential cation channel subfamily C member 1 ISO (PMID:14505576), (PMID:19052258) BHF-UCL PMID:14505576, PMID:19052258 NCBI chrNW_004936540:4,340,672...4,417,655 JBrowse link
G Trpc3 transient receptor potential cation channel subfamily C member 3 ISO (PMID:21062895) UniProtKB PMID:21062895 NCBI chrNW_004936662:1,130,555...1,171,352 JBrowse link
G Trpv6 transient receptor potential cation channel subfamily V member 6 ISO (MGI:MGI:5466472|PMID:22878123) UniProtKB PMID:22878123 MGI:MGI:5466472 NCBI chrNW_004936527:345,237...359,877 JBrowse link
G Tshb thyroid stimulating hormone subunit beta ISO RGD PMID:9587629 RGD:1624158 NCBI chrNW_004936627:399,191...404,371 JBrowse link
G Ttn titin ISO (PMID:7607248) BHF-UCL PMID:7607248 NCBI chrNW_004936509:7,733,426...7,999,503 JBrowse link
G Txnip thioredoxin interacting protein ISO RGD PMID:11579135 RGD:1642761 NCBI chrNW_004936867:722,544...726,595 JBrowse link
G Vdr vitamin D receptor ISO RGD PMID:20181667 RGD:4889911 NCBI chrNW_004936512:5,741,836...5,800,999 JBrowse link
response to cesium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101954950 aromatase ISO (137)Cs RGD PMID:20451883 RGD:4890356 NCBI chrNW_004936471:13,107,603...13,136,910 JBrowse link
G LOC101972957 vitamin D 25-hydroxylase ISO RGD PMID:16806633 RGD:1601035 NCBI chrNW_004936528:3,881,630...3,897,613 JBrowse link
response to cobalt ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alad aminolevulinate dehydratase ISO RGD PMID:826600 RGD:1599026 NCBI chrNW_004936559:226,481...237,258 JBrowse link
G Alas1 5'-aminolevulinate synthase 1 ISO RGD PMID:818637, PMID:6688350 RGD:4144807, RGD:4144808 NCBI chrNW_004936529:3,518,337...3,531,842 JBrowse link
G Alas2 5'-aminolevulinate synthase 2 ISO RGD PMID:2781150 RGD:11035236 NCBI chrNW_004936751:1,818,255...1,841,028 JBrowse link
G Atf1 activating transcription factor 1 ISO RGD PMID:10559391 RGD:2313660 NCBI chrNW_004936512:8,379,802...8,426,574 JBrowse link
G Casp3 caspase 3 ISO RGD PMID:18598848 RGD:2311433 NCBI chrNW_004936554:4,571,072...4,593,765 JBrowse link
G Casp8 caspase 8 ISO RGD PMID:18598848 RGD:2311433 NCBI chrNW_004936726:554,627...596,334 JBrowse link
G Casp9 caspase 9 ISO RGD PMID:18598848 RGD:2311433 NCBI chrNW_004936474:3,178,097...3,196,130 JBrowse link
G D2hgdh D-2-hydroxyglutarate dehydrogenase ISO PMID:15070399 HGNC PMID:15070399 RGD:8553974 NCBI chrNW_004936745:208,510...234,056 JBrowse link
G Ep300 E1A binding protein p300 ISO CoCl2 (hypoxia mimic) RGD PMID:18586071 RGD:2311718 NCBI chrNW_004936492:696,982...778,132 JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO RGD PMID:19384568 RGD:9068898 NCBI chrNW_004936495:5,770,988...5,816,157 JBrowse link
G Hmbs hydroxymethylbilane synthase ISO RGD PMID:6688350 RGD:4144808 NCBI chrNW_004936542:4,037,888...4,046,089 JBrowse link
response to copper ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aanat aralkylamine N-acetyltransferase ISO RGD PMID:10451024 RGD:2301041 NCBI chrNW_004936594:1,556,303...1,559,198 JBrowse link
G Acadm acyl-CoA dehydrogenase medium chain ISO RGD PMID:10958805 RGD:1598689 NCBI chrNW_004936571:2,761,254...2,797,045 JBrowse link
G Aldob aldolase, fructose-bisphosphate B ISO RGD PMID:11044632 RGD:1599065 NCBI chrNW_004936524:9,584,302...9,592,961 JBrowse link
G Atp7a ATPase copper transporting alpha ISO RGD PMID:15591161, PMID:17158254 RGD:1599385, RGD:1599393 NCBI chrNW_004936683:2,874,022...2,936,214 JBrowse link
G Atp7b ATPase copper transporting beta ISO (PMID:15269005), (PMID:16472602), (PMID:16939419) RGD
UniProtKB
PMID:15269005, PMID:15591161, PMID:16472602, PMID:16939419 RGD:1599393 NCBI chrNW_004936565:4,694,294...4,763,661 JBrowse link
G Bax BCL2 associated X, apoptosis regulator ISO RGD PMID:18289470 RGD:2293024 NCBI chrNW_004936664:2,968,103...2,973,652 JBrowse link
G Bcl2 BCL2 apoptosis regulator ISO RGD PMID:18289470 RGD:2293024 NCBI chrNW_004936497:2,209,136...2,373,580 JBrowse link
G Cdk1 cyclin dependent kinase 1 ISO RGD PMID:19497425 RGD:2316369 NCBI chrNW_004936614:2,300,682...2,313,611 JBrowse link
G Cp ceruloplasmin ISO RGD PMID:19700037 RGD:2314683 NCBI chrNW_004936519:6,431,156...6,473,183 JBrowse link
G Dbh dopamine beta-hydroxylase ISO RGD PMID:19079842 RGD:5129530 NCBI chrNW_004936669:3,302,014...3,326,233 JBrowse link
G Icam1 intercellular adhesion molecule 1 ISO RGD PMID:20544302 RGD:4145394 NCBI chrNW_004936659:616,570...627,172 JBrowse link
G Il1a interleukin 1 alpha ISO (PMID:12746488) UniProtKB PMID:12746488 NCBI chrNW_004936783:1,210,715...1,218,315 JBrowse link
G Ireb2 iron responsive element binding protein 2 ISO RGD PMID:24024382 RGD:12904019 NCBI chrNW_004936471:36,547,552...36,601,327 JBrowse link
G Lcat lecithin-cholesterol acyltransferase ISO RGD PMID:7288494 RGD:1581777 NCBI chrNW_004936475:18,294,013...18,297,433 JBrowse link
G Lipc lipase C, hepatic type ISO RGD PMID:3420106 RGD:2308778 NCBI chrNW_004936471:19,604,083...19,733,721 JBrowse link
G LOC101978323 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial ISO RGD PMID:3348368 RGD:2307322 NCBI chrNW_004936646:1,899,686...1,904,104 JBrowse link
G Loxl2 lysyl oxidase like 2 ISO (PMID:23319596) UniProtKB PMID:23319596 NCBI chrNW_004936555:6,781,563...6,865,662 JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 ISO RGD PMID:17418555 RGD:1642079 NCBI chrNW_004936520:733,760...850,563 JBrowse link
G Pam peptidylglycine alpha-amidating monooxygenase ISO RGD PMID:15629125 RGD:2302420 NCBI chrNW_004936523:1,492,795...1,786,942 JBrowse link
G Prnp prion protein ISO RGD PMID:16148034 RGD:1599958 NCBI chrNW_004936485:14,104,829...14,118,614 JBrowse link
G S100a13 S100 calcium binding protein A13 ISO RGD PMID:12754378 RGD:2316108 NCBI chrNW_004936580:3,420,016...3,429,009 JBrowse link
G Sod1 superoxide dismutase 1 ISO RGD PMID:12514262, PMID:14747682 RGD:1581098, RGD:634854 NCBI chrNW_004936500:10,345,154...10,352,873 JBrowse link
G Sord sorbitol dehydrogenase ISO RGD PMID:11044632 RGD:1599065 NCBI chrNW_004936471:7,760,097...7,805,475 JBrowse link
G Tfrc transferrin receptor ISO RGD PMID:17298691 RGD:2292032 NCBI chrNW_004936784:696,738...728,385 JBrowse link
G Tk1 thymidine kinase 1 ISO RGD PMID:6642140 RGD:2317232 NCBI chrNW_004936594:2,784,891...2,794,693 JBrowse link
response to iron ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase ISO RGD PMID:9719948 RGD:1598519 NCBI chrNW_004936530:7,543,743...7,621,392 JBrowse link
G Alad aminolevulinate dehydratase ISO RGD PMID:14598909 RGD:4144204 NCBI chrNW_004936559:226,481...237,258 JBrowse link
G Apbb1 amyloid beta precursor protein binding family B member 1 ISO RGD PMID:18723004 RGD:2301196 NCBI chrNW_004936842:452,682...476,533 JBrowse link
G Bcl2 BCL2 apoptosis regulator ISO (PMID:11264898) UniProtKB PMID:11264898 NCBI chrNW_004936497:2,209,136...2,373,580 JBrowse link
G Bmp6 bone morphogenetic protein 6 ISO RGD PMID:21859731 RGD:7242407 NCBI chrNW_004936534:4,707,658...4,871,865 JBrowse link
G C1qa complement C1q A chain ISO RGD PMID:18723004 RGD:2301196 NCBI chrNW_004936474:8,007,953...8,010,591 JBrowse link
G Casp6 caspase 6 ISO RGD PMID:17571084 RGD:2301311 NCBI chrNW_004936563:912,502...920,025 JBrowse link
G Cpox coproporphyrinogen oxidase ISO RGD PMID:2289051 RGD:1600959 NCBI chrNW_004936630:4,412,099...4,424,867 JBrowse link
G Dbh dopamine beta-hydroxylase ISO RGD PMID:18363828 RGD:5129689 NCBI chrNW_004936669:3,302,014...3,326,233 JBrowse link
G Drd2 dopamine receptor D2 ISO RGD PMID:19022977 RGD:2311557 NCBI chrNW_004936612:1,094,686...1,154,149 JBrowse link
G Fkbp1a FKBP prolyl isomerase 1A ISO RGD PMID:17546681 RGD:2302076 NCBI chrNW_004936485:17,305,376...17,311,797 JBrowse link
G Fn1 fibronectin 1 ISO RGD PMID:18723004 RGD:2301196 NCBI chrNW_004936586:1,708,803...1,773,372 JBrowse link
G Fxn frataxin ISO (PMID:18424449) BHF-UCL PMID:18424449 NCBI chrNW_004936503:5,323,206...5,343,228 JBrowse link
G Hamp hepcidin antimicrobial peptide ISO (PMID:12469120) BHF-UCL PMID:12469120 NCBI chrNW_004936570:1,009,344...1,010,654 JBrowse link
G Hfe homeostatic iron regulator ISO (PMID:21173098) BHF-UCL PMID:21173098 NCBI chrNW_004936671:1,940,079...1,947,574 JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO (PMID:28296633) UniProtKB PMID:28296633 NCBI chrNW_004936495:5,770,988...5,816,157 JBrowse link
G LOC101976046 cytochrome b reductase 1 ISO (MGI:MGI:2654570|PMID:11230685) MGI PMID:11230685 MGI:MGI:2654570 NCBI chrNW_004936509:1,770,931...1,797,442 JBrowse link
G Mdm2 MDM2 proto-oncogene ISO RGD PMID:20019189 RGD:2317357 NCBI chrNW_004936545:6,709,903...6,732,334 JBrowse link
G Ngb neuroglobin ISO RGD PMID:23231908 RGD:9831163 NCBI chrNW_004936488:6,094,089...6,098,876 JBrowse link
G Slc11a2 solute carrier family 11 member 2 NOT ISO (PMID:12209011), (PMID:12734107), (PMID:15792797), (PMID:17109629), (PMID:18082289)
(PMID:15792797)
RGD
UniProtKB
PMID:12209011, PMID:12734107, PMID:12876064, PMID:15792797, PMID:17109629, PMID:18082289 RGD:1580429 NCBI chrNW_004936512:8,590,302...8,622,121 JBrowse link
G Slc6a3 solute carrier family 6 member 3 ISO RGD PMID:12672939 RGD:1625670 NCBI chrNW_004936815:359,775...400,690 JBrowse link
G Tfr2 transferrin receptor 2 ISO (PMID:21173098) BHF-UCL PMID:21173098 NCBI chrNW_004936543:667,570...681,872 JBrowse link
G Tfrc transferrin receptor ISO RGD PMID:17060373, PMID:23635304 RGD:2292035, RGD:7244375 NCBI chrNW_004936784:696,738...728,385 JBrowse link
G Urod uroporphyrinogen decarboxylase ISO in hexachlorobenzene-treated rats RGD PMID:891100 RGD:4145101 NCBI chrNW_004936474:26,207,169...26,210,599 JBrowse link
response to iron(II) ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aco1 aconitase 1 ISO (PMID:8041788) UniProtKB PMID:8041788 NCBI chrNW_004936524:1,081,672...1,134,971 JBrowse link
G Atg5 autophagy related 5 ISO RGD PMID:23187302 RGD:11561914 NCBI chrNW_004936564:2,759,085...2,885,394 JBrowse link
G Becn1 beclin 1 ISO RGD PMID:23187302 RGD:11561914 NCBI chrNW_004936490:17,518,100...17,531,126 JBrowse link
G Ireb2 iron responsive element binding protein 2 ISO RGD PMID:19943190 RGD:6893272 NCBI chrNW_004936471:36,547,552...36,601,327 JBrowse link
G Lct lactase ISO RGD PMID:16081762 RGD:1600248 NCBI chrNW_004936469:40,064,822...40,108,423 JBrowse link
G Map1lc3a microtubule associated protein 1 light chain 3 alpha ISO RGD PMID:23187302 RGD:11561914 NCBI chrNW_004936561:6,104,748...6,106,348 JBrowse link
G Pawr pro-apoptotic WT1 regulator ISO RGD PMID:10349840 RGD:9835366 NCBI chrNW_004936698:650,225...746,593 JBrowse link
G Pdx1 pancreatic and duodenal homeobox 1 ISO RGD PMID:16081762 RGD:1600248 NCBI chrNW_004936472:23,102,534...23,107,127 JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 ISO FeSO4 RGD PMID:17600839 RGD:4108504 NCBI chrNW_004936480:1,188,408...1,273,210 JBrowse link
G Snca synuclein alpha ISO (PMID:11850416) UniProtKB PMID:11850416 NCBI chrNW_004936685:2,077,017...2,175,298 JBrowse link
response to iron(III) ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha ISO RGD PMID:16629162 RGD:1599392 NCBI chrNW_004936683:2,874,022...2,936,214 JBrowse link
G G6pd glucose-6-phosphate dehydrogenase ISO RGD PMID:24599681 RGD:10449122 NCBI chrNW_004936809:1,269,900...1,285,853 JBrowse link
G Gsr glutathione-disulfide reductase ISO RGD PMID:24388910 RGD:11059508 NCBI chrNW_004936792:531,076...579,083 JBrowse link
G Ireb2 iron responsive element binding protein 2 ISO RGD PMID:21753061 RGD:12904028 NCBI chrNW_004936471:36,547,552...36,601,327 JBrowse link
G LOC101969148 cytochrome P450 1A1 ISO Hematite RGD PMID:15211619 RGD:2306667 NCBI chrNW_004936471:33,682,730...33,688,332 JBrowse link
response to lead ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alad aminolevulinate dehydratase ISO RGD PMID:16597373 RGD:1599014 NCBI chrNW_004936559:226,481...237,258 JBrowse link
G Alas2 5'-aminolevulinate synthase 2 ISO RGD PMID:16597373 RGD:1599014 NCBI chrNW_004936751:1,818,255...1,841,028 JBrowse link
G App amyloid beta precursor protein ISO RGD PMID:16230335, PMID:29908845 RGD:10054254, RGD:13782138 NCBI chrNW_004936640:1,549,977...1,787,436 JBrowse link
G Atp7a ATPase copper transporting alpha ISO RGD PMID:25579025 RGD:11341668 NCBI chrNW_004936683:2,874,022...2,936,214 JBrowse link
G Bace1 beta-secretase 1 ISO RGD PMID:29908845 RGD:13782138 NCBI chrNW_004936542:2,514,297...2,539,088 JBrowse link
G Bcl2l1 BCL2 like 1 ISO RGD PMID:17912701 RGD:1643487 NCBI chrNW_004936485:18,654,046...18,707,324 JBrowse link
G Becn1 beclin 1 ISO RGD PMID:22927075 RGD:11561915 NCBI chrNW_004936490:17,518,100...17,531,126 JBrowse link
G Cat catalase ISO RGD PMID:15721881 RGD:9068900 NCBI chrNW_004936533:3,601,270...3,637,128 JBrowse link
G Cdk4 cyclin dependent kinase 4 ISO RGD PMID:18353414 RGD:2293585 NCBI chrNW_004936646:1,886,262...1,889,260 JBrowse link
G Cpox coproporphyrinogen oxidase ISO RGD PMID:656697 RGD:4145135 NCBI chrNW_004936630:4,412,099...4,424,867 JBrowse link
G Crp C-reactive protein ISO RGD PMID:21378372 RGD:5131295 NCBI chrNW_004936740:885,855...888,854 JBrowse link
G Cryaa crystallin alpha A ISO RGD PMID:15905016 RGD:1600983 NCBI chrNW_004936500:931,804...935,185 JBrowse link
G Dnmt1 DNA methyltransferase 1 ISO RGD PMID:23246732 RGD:9588316 NCBI chrNW_004936659:520,181...565,496 JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha ISO RGD PMID:23246732 RGD:9588316 NCBI chrNW_004936493:6,963,406...7,013,256 JBrowse link
G Fech ferrochelatase ISO RGD PMID:4065316 RGD:4144206 NCBI chrNW_004936497:6,755,626...6,788,568 JBrowse link
G Ftl ferritin light chain ISO RGD PMID:19332663 RGD:5509838 NCBI chrNW_004936664:2,976,325...2,977,878 JBrowse link
G Hmbs hydroxymethylbilane synthase ISO RGD PMID:16566714 RGD:4144781 NCBI chrNW_004936542:4,037,888...4,046,089 JBrowse link
G Hsd17b3 hydroxysteroid 17-beta dehydrogenase 3 ISO RGD PMID:19652923 RGD:4890953 NCBI chrNW_004936487:228,301...282,495 JBrowse link
G Lct lactase ISO RGD PMID:16092086 RGD:1600247 NCBI chrNW_004936469:40,064,822...40,108,423 JBrowse link
G LOC101976500 haptoglobin ISO RGD PMID:9082656 RGD:1626395 NCBI chrNW_004936475:21,841,054...21,845,821 JBrowse link
G Map1lc3a microtubule associated protein 1 light chain 3 alpha ISO RGD PMID:22927075 RGD:11561915 NCBI chrNW_004936561:6,104,748...6,106,348 JBrowse link
G Mapt microtubule associated protein tau ISO PMID:22387731 ARUK-UCL PMID:22387731 RGD:13506262 NCBI chrNW_004936541:2,381,411...2,479,984 JBrowse link
G Mecp2 methyl-CpG binding protein 2 ISO RGD PMID:23246732 RGD:9588316 NCBI chrNW_004936809:902,938...967,771 JBrowse link
G Ncam1 neural cell adhesion molecule 1 ISO RGD PMID:18499259 RGD:2326016 NCBI chrNW_004936612:1,262,557...1,556,281 JBrowse link
G Nos1 nitric oxide synthase 1 ISO RGD PMID:19524414 RGD:5132593 NCBI chrNW_004936558:5,162,471...5,302,488 JBrowse link
G Nos3 nitric oxide synthase 3 ISO RGD PMID:17403586, PMID:19524414 RGD:2292145, RGD:5132593 NCBI chrNW_004936527:6,427,147...6,445,770 JBrowse link
G Plscr1 phospholipid scramblase 1 ISO (PMID:29748552) UniProt PMID:29748552 NCBI chrNW_004936519:8,759,702...8,790,823 JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha ISO PMID:22387731 ARUK-UCL PMID:22387731 RGD:13506262 NCBI chrNW_004936599:2,345,982...2,348,494 JBrowse link
G Ppp2ca protein phosphatase 2 catalytic subunit alpha ISO PMID:22387731 ARUK-UCL PMID:22387731 RGD:13506262 NCBI chrNW_004936647:1,031,118...1,055,961 JBrowse link
G Ppp2cb protein phosphatase 2 catalytic subunit beta ISO PMID:22387731 ARUK-UCL PMID:22387731 RGD:13506262 NCBI chrNW_004936792:622,105...633,800 JBrowse link
G Pth parathyroid hormone ISO RGD PMID:23376407 RGD:7242792 NCBI chrNW_004936528:5,081,569...5,084,030 JBrowse link
G Qdpr quinoid dihydropteridine reductase ISO RGD PMID:3815851 RGD:5128602 NCBI chrNW_004936477:10,687,328...10,708,015 JBrowse link
G Slc11a2 solute carrier family 11 member 2 ISO RGD PMID:19083094 RGD:2311406 NCBI chrNW_004936512:8,590,302...8,622,121 JBrowse link
G Slc34a1 solute carrier family 34 member 1 ISO (PMID:8898024) UniProtKB PMID:8898024 NCBI chrNW_004936597:1,667,700...1,684,533 JBrowse link
G Slc6a1 solute carrier family 6 member 1 ISO RGD PMID:15149801 RGD:1643208 NCBI chrNW_004936602:2,359,151...2,397,346 JBrowse link
G Sparc secreted protein acidic and cysteine rich ISO RGD PMID:1412468 RGD:2300078 NCBI chrNW_004936515:11,026,156...11,046,812 JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 ISO RGD PMID:16705668 RGD:2308832 NCBI chrNW_004936492:115,923...174,614 JBrowse link
G Star steroidogenic acute regulatory protein ISO RGD PMID:14514953 RGD:1600082 NCBI chrNW_004936710:1,523,289...1,530,181 JBrowse link
G Tf transferrin ISO RGD PMID:23007736 RGD:7244378 NCBI chrNW_004936529:6,856,042...6,895,989 JBrowse link
response to lithium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta1 actin alpha 1, skeletal muscle ISO RGD PMID:12878481 RGD:1598728 NCBI chrNW_004936484:20,236,320...20,239,385 JBrowse link
G Adcy1 adenylate cyclase 1 ISO RGD PMID:10706991 RGD:1625751 NCBI chrNW_004936478:20,310,509...20,477,506 JBrowse link
G Aqp2 aquaporin 2 ISO RGD PMID:19244398 RGD:2313118 NCBI chrNW_004936512:7,628,677...7,633,344 JBrowse link
G Arl13b ADP ribosylation factor like GTPase 13B ISO RGD PMID:26499268 RGD:11553939 NCBI chrNW_004936666:115,964...179,639 JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 ISO RGD PMID:17263970 RGD:2314145 NCBI chrNW_004936492:11,315,929...11,317,166 JBrowse link
G Bag1 BAG cochaperone 1 ISO RGD PMID:15872096 RGD:2296018 NCBI chrNW_004936524:1,793,001...1,804,145 JBrowse link
G Cspg4 chondroitin sulfate proteoglycan 4 ISO RGD PMID:19439244 RGD:5686861 NCBI chrNW_004936471:34,438,676...34,475,005 JBrowse link
G Eif2b5 eukaryotic translation initiation factor 2B subunit epsilon ISO RGD PMID:12098503 RGD:11041884 NCBI chrNW_004936578:5,716,333...5,724,869 JBrowse link
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 ISO PMID:15269270 UniProt PMID:15269270 RGD:8553901 NCBI chrNW_004936515:8,937,391...9,236,438 JBrowse link
G Gria2 glutamate ionotropic receptor AMPA type subunit 2 ISO PMID:15269270 UniProt PMID:15269270 RGD:8553901 NCBI chrNW_004936576:3,800,369...3,940,324 JBrowse link
G Gria3 glutamate ionotropic receptor AMPA type subunit 3 ISO PMID:15269270 UniProt PMID:15269270 RGD:8553901 NCBI chrNW_004936479:7,050,018...7,323,047 JBrowse link
G Gsk3b glycogen synthase kinase 3 beta ISO RGD PMID:19359144, PMID:20926980 RGD:10045370, RGD:2317787 NCBI chrNW_004936536:6,730,070...6,893,818 JBrowse link
G Igfbp2 insulin like growth factor binding protein 2 ISO RGD PMID:16738484 RGD:1626489 NCBI chrNW_004936586:671,760...696,783 JBrowse link
G Impa1 inositol monophosphatase 1 ISO RGD PMID:12551726 RGD:2302238 NCBI chrNW_004936656:2,598,454...2,616,643 JBrowse link
G Lef1 lymphoid enhancer binding factor 1 ISO RGD PMID:17329570 RGD:2298718 NCBI chrNW_004936818:453,635...569,194 JBrowse link
G Nfe2l2 nuclear factor, erythroid 2 like 2 ISO RGD PMID:25224036 RGD:26923906 NCBI chrNW_004936509:6,589,967...6,621,171 JBrowse link
G Pklr pyruvate kinase L/R ISO RGD PMID:10700396 RGD:1625595 NCBI chrNW_004936580:4,770,977...4,799,316 JBrowse link
G Pla2g4a phospholipase A2 group IVA ISO RGD PMID:10716228 RGD:8694084 NCBI chrNW_004936481:3,559,377...3,689,797 JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 ISO RGD PMID:12232777 RGD:5688238 NCBI chrNW_004936481:3,821,564...3,828,086 JBrowse link
G Ptk2b protein tyrosine kinase 2 beta ISO RGD PMID:15236860 RGD:1642622 NCBI chrNW_004936675:216,970...325,670 JBrowse link
G Reln reelin ISO RGD PMID:19359144 RGD:2317787 NCBI chrNW_004936479:19,628,488...20,088,278 JBrowse link
G Tfap2b transcription factor AP-2 beta ISO RGD PMID:15827566 RGD:1601546 NCBI chrNW_004936476:9,855,992...9,884,788 JBrowse link
response to magnesium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp6 bone morphogenetic protein 6 ISO RGD PMID:21736832 RGD:7242408 NCBI chrNW_004936534:4,707,658...4,871,865 JBrowse link
G C3 complement C3 ISO RGD PMID:12759143 RGD:5129546 NCBI chrNW_004936588:3,985,732...4,023,221 JBrowse link
G Cd14 CD14 molecule ISO RGD PMID:16180088 RGD:7191759 NCBI chrNW_004936531:9,572,392...9,575,771 JBrowse link
G Cnga3 cyclic nucleotide gated channel subunit alpha 3 ISO RGD PMID:11387380 RGD:1600869 NCBI chrNW_004936744:1,499,431...1,537,784 JBrowse link
G D2hgdh D-2-hydroxyglutarate dehydrogenase NOT ISO PMID:15070399 HGNC PMID:15070399 RGD:8553974 NCBI chrNW_004936745:208,510...234,056 JBrowse link
G Entpd6 ectonucleoside triphosphate diphosphohydrolase 6 ISO RGD PMID:11042118 RGD:727304 NCBI chrNW_004936620:598,677...627,766 JBrowse link
G Fgf23 fibroblast growth factor 23 ISO RGD PMID:23608165 RGD:10044234 NCBI chrNW_004936606:4,555,034...4,561,961 JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B ISO magnesium-L-threonate RGD PMID:20152124 RGD:4107022 NCBI chrNW_004936587:3,406,055...3,806,956 JBrowse link
G Kcnc2 potassium voltage-gated channel subfamily C member 2 ISO RGD PMID:18775767 RGD:9685735 NCBI chrNW_004936568:3,508,212...3,694,459 JBrowse link
G Kcnip3 potassium voltage-gated channel interacting protein 3 ISO (MGI:MGI:5882899|PMID:15746104) UniProt PMID:15746104 MGI:MGI:5882899 NCBI chrNW_004936744:91,833...167,214 JBrowse link
G Lipc lipase C, hepatic type ISO RGD PMID:2046484 RGD:2308775 NCBI chrNW_004936471:19,604,083...19,733,721 JBrowse link
G LOC101976500 haptoglobin ISO RGD PMID:11300617 RGD:1626379 NCBI chrNW_004936475:21,841,054...21,845,821 JBrowse link
G Mdm2 MDM2 proto-oncogene ISO RGD PMID:15165363 RGD:2317397 NCBI chrNW_004936545:6,709,903...6,732,334 JBrowse link
G Plcg2 phospholipase C gamma 2 ISO RGD PMID:8958450 RGD:2303040 NCBI chrNW_004936475:29,248,533...29,377,335 JBrowse link
G Ryr2 ryanodine receptor 2 ISO RGD PMID:16971497 RGD:1599254 NCBI chrNW_004936484:15,402,488...15,825,410 JBrowse link
G Slc34a1 solute carrier family 34 member 1 ISO RGD PMID:18701629 RGD:2311318 NCBI chrNW_004936597:1,667,700...1,684,533 JBrowse link
G Slc34a3 solute carrier family 34 member 3 ISO RGD PMID:18701629 RGD:2311318 NCBI chrNW_004936669:755,091...760,365 JBrowse link
G Snca synuclein alpha ISO (PMID:11850416) UniProtKB PMID:11850416 NCBI chrNW_004936685:2,077,017...2,175,298 JBrowse link
G Sphk1 sphingosine kinase 1 ISO RGD PMID:18028875 RGD:2311354 NCBI chrNW_004936594:1,482,830...1,489,337 JBrowse link
G Thbs1 thrombospondin 1 ISO (PMID:6777381) BHF-UCL PMID:6777381 NCBI chrNW_004936471:3,064,466...3,081,125 JBrowse link
G Tnfrsf11b TNF receptor superfamily member 11b ISO RGD PMID:16162295 RGD:1624175 NCBI chrNW_004936470:27,571,263...27,598,725 JBrowse link
response to manganese ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam9 ADAM metallopeptidase domain 9 ISO (PMID:11162558) BHF-UCL PMID:11162558 NCBI chrNW_004936710:2,301,470...2,388,533 JBrowse link
G Atp5f1b ATP synthase F1 subunit beta ISO RGD PMID:15589972 RGD:13204841 NCBI chrNW_004936646:951,236...958,907 JBrowse link
G Atp7a ATPase copper transporting alpha ISO RGD PMID:24614235 RGD:11341682 NCBI chrNW_004936683:2,874,022...2,936,214 JBrowse link
G D2hgdh D-2-hydroxyglutarate dehydrogenase ISO PMID:15070399 HGNC PMID:15070399 RGD:8553974 NCBI chrNW_004936745:208,510...234,056 JBrowse link
G Fibin fin bud initiation factor homolog ISO (PMID:21615908) UniProtKB PMID:21615908 NCBI chrNW_004936540:6,157,130...6,158,321 JBrowse link
G Ggcx gamma-glutamyl carboxylase ISO RGD PMID:7409196 RGD:11040522 NCBI chrNW_004936712:1,696,264...1,709,087 JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A ISO RGD PMID:20175136 RGD:2325871 NCBI chrNW_004936530:8,286,101...8,612,183 JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B ISO RGD PMID:20175136 RGD:2325871 NCBI chrNW_004936587:3,406,055...3,806,956 JBrowse link
G Insr insulin receptor ISO RGD PMID:6368536 RGD:2307040 NCBI chrNW_004936588:4,345,306...4,453,380 JBrowse link
G Mfn1 mitofusin 1 ISO RGD PMID:15589972 RGD:13204841 NCBI chrNW_004936566:3,737,315...3,775,894 JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 ISO RGD PMID:17827730 RGD:1642596 NCBI chrNW_004936481:3,821,564...3,828,086 JBrowse link
G Slc11a2 solute carrier family 11 member 2 ISO RGD PMID:17060373, PMID:18849539 RGD:2292035, RGD:2311407 NCBI chrNW_004936512:8,590,302...8,622,121 JBrowse link
G Sod2 superoxide dismutase 2 ISO RGD PMID:17920449 RGD:2317398 NCBI chrNW_004936489:11,178,338...11,191,601 JBrowse link
G Tfrc transferrin receptor ISO RGD PMID:17060373 RGD:2292035 NCBI chrNW_004936784:696,738...728,385 JBrowse link
G Tspo translocator protein ISO RGD PMID:12946575 RGD:2317159 NCBI chrNW_004936718:992,301...995,172 JBrowse link
response to manganese-induced endoplasmic reticulum stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf4 activating transcription factor 4 ISO PMID:23934647 ParkinsonsUK-UCL PMID:23934647 RGD:10047151 NCBI chrNW_004936492:2,114,478...2,115,969 JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 ISO PMID:23934647 ParkinsonsUK-UCL PMID:23934647 RGD:10047151 NCBI chrNW_004936712:413,602...454,443 JBrowse link
G Eif2s1 eukaryotic translation initiation factor 2 subunit alpha ISO PMID:23934647 ParkinsonsUK-UCL PMID:23934647 RGD:10047151 NCBI chrNW_004936495:10,746,687...10,769,304 JBrowse link
response to mercury ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alad aminolevulinate dehydratase ISO RGD PMID:17881112 RGD:4144162 NCBI chrNW_004936559:226,481...237,258 JBrowse link
G Aqp9 aquaporin 9 ISO (PMID:9733774) UniProtKB PMID:9733774 NCBI chrNW_004936471:19,321,366...19,361,227 JBrowse link
G Arg2 arginase 2 ISO RGD PMID:17874066 RGD:4143285 NCBI chrNW_004936495:11,004,296...11,045,467 JBrowse link
G Bsg basigin (Ok blood group) ISO RGD PMID:15917240 RGD:2289064 NCBI chrNW_004936588:181,688...189,795 JBrowse link
G Gatm glycine amidinotransferase ISO RGD PMID:15600250 RGD:1599816 NCBI chrNW_004936471:8,017,611...8,032,703 JBrowse link
G Mbp myelin basic protein ISO RGD PMID:22835759 RGD:7327206 NCBI chrNW_004936616:2,082,154...2,159,028 JBrowse link
G Nos3 nitric oxide synthase 3 ISO RGD PMID:28980197 RGD:13450930 NCBI chrNW_004936527:6,427,147...6,445,770 JBrowse link
G Nr3c1 nuclear receptor subfamily 3 group C member 1 ISO RGD PMID:17177174 RGD:4892110 NCBI chrNW_004936504:10,960,069...11,056,834 JBrowse link
G Pgam2 phosphoglycerate mutase 2 ISO RGD PMID:2850701 RGD:1598712 NCBI chrNW_004936478:19,021,928...19,026,110 JBrowse link
G Slc34a1 solute carrier family 34 member 1 ISO (PMID:8898024) UniProtKB PMID:8898024 NCBI chrNW_004936597:1,667,700...1,684,533 JBrowse link
G Tat tyrosine aminotransferase ISO RGD PMID:16307467 RGD:1600129 NCBI chrNW_004936475:22,190,282...22,199,398 JBrowse link
G Urod uroporphyrinogen decarboxylase ISO RGD PMID:6482878 RGD:4145085 NCBI chrNW_004936474:26,207,169...26,210,599 JBrowse link
response to nickel cation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alas1 5'-aminolevulinate synthase 1 ISO RGD PMID:925603 RGD:4144822 NCBI chrNW_004936529:3,518,337...3,531,842 JBrowse link
G Cacna1g calcium voltage-gated channel subunit alpha1 G ISO (MGI:MGI:3714901|PMID:16690884) MGI PMID:16690884 MGI:MGI:3714901 NCBI chrNW_004936490:11,093,600...11,157,756 JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 ISO RGD PMID:15736156 RGD:10059324 NCBI chrNW_004936542:7,577,192...7,581,598 JBrowse link
G Lct lactase ISO RGD PMID:16819762 RGD:1600243 NCBI chrNW_004936469:40,064,822...40,108,423 JBrowse link
response to platinum ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alad aminolevulinate dehydratase ISO RGD PMID:925603 RGD:4144822 NCBI chrNW_004936559:226,481...237,258 JBrowse link
G Alas1 5'-aminolevulinate synthase 1 ISO RGD PMID:925603 RGD:4144822 NCBI chrNW_004936529:3,518,337...3,531,842 JBrowse link
G Fech ferrochelatase ISO cisplatin RGD PMID:4040350 RGD:4144805 NCBI chrNW_004936497:6,755,626...6,788,568 JBrowse link
G Uros uroporphyrinogen III synthase ISO RGD PMID:925603 RGD:4144822 NCBI chrNW_004936486:13,792,354...13,816,744 JBrowse link
response to potassium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif 13 ISO RGD PMID:17804457 RGD:8554499 NCBI chrNW_004936669:3,449,259...3,478,471 JBrowse link
G Bdnf brain derived neurotrophic factor ISO RGD PMID:11007900 RGD:8655537 NCBI chrNW_004936540:5,530,081...5,582,765 JBrowse link
G Clu clusterin ISO RGD PMID:12782389 RGD:727237 NCBI chrNW_004936675:499,745...513,515 JBrowse link
G Gnrh1 gonadotropin releasing hormone 1 ISO RGD PMID:3282935 RGD:9685069 NCBI chrNW_004936757:1,282,185...1,285,804 JBrowse link
G Kcnc1 potassium voltage-gated channel subfamily C member 1 ISO RGD PMID:9526005 RGD:9685724 NCBI chrNW_004936528:1,351,687...1,393,926 JBrowse link
G Kcnj1 potassium inwardly rectifying channel subfamily J member 1 ISO RGD PMID:20702602 RGD:7244392 NCBI chrNW_004936572:3,396,329...3,425,848 JBrowse link
G Kmt2a lysine methyltransferase 2A ISO RGD PMID:20211609 RGD:9588219 NCBI chrNW_004936542:3,480,071...3,566,823 JBrowse link
G Slc26a5 solute carrier family 26 member 5 ISO RGD PMID:21624428 RGD:9479071 NCBI chrNW_004936479:20,104,625...20,145,392 JBrowse link
G Slc34a1 solute carrier family 34 member 1 ISO RGD PMID:19493963 RGD:2311317 NCBI chrNW_004936597:1,667,700...1,684,533 JBrowse link
response to silver ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 ISO (MGI:MGI:3054344|PMID:15294947) MGI PMID:15294947 MGI:MGI:3054344 NCBI chrNW_004936599:2,070,211...2,079,169 JBrowse link
response to zinc ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aanat aralkylamine N-acetyltransferase ISO RGD PMID:10451024 RGD:2301041 NCBI chrNW_004936594:1,556,303...1,559,198 JBrowse link
G Abcc8 ATP binding cassette subfamily C member 8 ISO RGD PMID:15613469 RGD:1598638 NCBI chrNW_004936528:1,608,782...1,682,873 JBrowse link
G Acp5 acid phosphatase 5, tartrate resistant ISO RGD PMID:19369052 RGD:2315901 NCBI chrNW_004936659:1,598,252...1,642,615 JBrowse link
G Alad aminolevulinate dehydratase ISO RGD PMID:3987589 RGD:1599024 NCBI chrNW_004936559:226,481...237,258 JBrowse link
G Aldob aldolase, fructose-bisphosphate B ISO RGD PMID:12721403 RGD:1599064 NCBI chrNW_004936524:9,584,302...9,592,961 JBrowse link
G Apoe apolipoprotein E ISO RGD PMID:1883846 RGD:10059683 NCBI chrNW_004936706:1,512,438...1,516,805 JBrowse link
G Asl argininosuccinate lyase ISO RGD PMID:11686772 RGD:4140931 NCBI chrNW_004936543:7,688,788...7,699,842 JBrowse link
G Ass1 argininosuccinate synthase 1 ISO RGD PMID:11686784 RGD:1599309 NCBI chrNW_004936487:17,482,307...17,527,407 JBrowse link
G Atp7a ATPase copper transporting alpha ISO RGD PMID:12840169 RGD:1599394 NCBI chrNW_004936683:2,874,022...2,936,214 JBrowse link
G Atp7b ATPase copper transporting beta ISO RGD PMID:12840169 RGD:1599394 NCBI chrNW_004936565:4,694,294...4,763,661 JBrowse link
G Bglap bone gamma-carboxyglutamate protein ISO RGD PMID:19506366 RGD:2316166 NCBI chrNW_004936580:5,480,023...5,482,288 JBrowse link
G Ca2 carbonic anhydrase 2 ISO RGD PMID:16140947 RGD:1600174 NCBI chrNW_004936544:362,591...379,151 JBrowse link
G Cps1 carbamoyl-phosphate synthase 1 ISO RGD PMID:12840196 RGD:4144099 NCBI chrNW_004936586:5,739,038...5,850,317 JBrowse link
G Crip1 cysteine rich protein 1 ISO (PMID:7999070) UniProtKB PMID:7999070 NCBI chrNW_004936621:101,046...102,660 JBrowse link
G D2hgdh D-2-hydroxyglutarate dehydrogenase ISO PMID:15070399 HGNC PMID:15070399 RGD:8553974 NCBI chrNW_004936745:208,510...234,056 JBrowse link
G Ggh gamma-glutamyl hydrolase ISO RGD PMID:2400760 RGD:1624346 NCBI chrNW_004936496:10,485,528...10,505,506 JBrowse link
G Gsk3b glycogen synthase kinase 3 beta ISO RGD PMID:27295130 RGD:13792738 NCBI chrNW_004936536:6,730,070...6,893,818 JBrowse link
G Gsta4 glutathione S-transferase alpha 4 ISO RGD PMID:20553223 RGD:5130934 NCBI chrNW_004936476:7,873,218...7,888,301 JBrowse link
G Haao 3-hydroxyanthranilate 3,4-dioxygenase ISO (PMID:12007609) UniProtKB PMID:12007609 NCBI chrNW_004936508:8,971,516...8,987,235 JBrowse link
G Hamp hepcidin antimicrobial peptide ISO RGD PMID:21430246 RGD:11041613 NCBI chrNW_004936570:1,009,344...1,010,654 JBrowse link
G Hmbs hydroxymethylbilane synthase ISO RGD PMID:8582750 RGD:4144793 NCBI chrNW_004936542:4,037,888...4,046,089 JBrowse link
G Hvcn1 hydrogen voltage gated channel 1 ISO (MGI:MGI:3623706|PMID:16556803)
(PMID:16554753)
HGNC PMID:16554753, PMID:16556803 MGI:MGI:3623706 NCBI chrNW_004936558:3,581,409...3,609,714 JBrowse link
G Ireb2 iron responsive element binding protein 2 ISO RGD PMID:24024381 RGD:12904020 NCBI chrNW_004936471:36,547,552...36,601,327 JBrowse link
G Khk ketohexokinase ISO RGD PMID:12721403 RGD:1599064 NCBI chrNW_004936493:5,444,284...5,455,100 JBrowse link
G Lck LCK proto-oncogene, Src family tyrosine kinase ISO RGD PMID:14652378 RGD:1600224 NCBI chrNW_004936474:15,293,115...15,314,072 JBrowse link
G LOC101958629 ATP-dependent RNA helicase DDX19A ISO RGD PMID:15361827 RGD:1304011 NCBI chrNW_004936475:23,206,224...23,233,316 JBrowse link
G Lta4h leukotriene A4 hydrolase ISO RGD PMID:17985342 RGD:2316582 NCBI chrNW_004936507:12,082,373...12,120,078 JBrowse link
G Otc ornithine carbamoyltransferase ISO RGD PMID:11686784 RGD:1599309 NCBI chrNW_004936502:5,234,253...5,291,891 JBrowse link
G P2rx7 purinergic receptor P2X 7 ISO (MGI:MGI:3583830|PMID:15978588), (MGI:MGI:3772417|PMID:18082965) MGI PMID:15978588, PMID:18082965 MGI:MGI:3583830, MGI:MGI:3772417 NCBI chrNW_004936558:3,106,819...3,149,689 JBrowse link
G Pam peptidylglycine alpha-amidating monooxygenase ISO (PMID:12699694) UniProt PMID:12699694 NCBI chrNW_004936523:1,492,795...1,786,942 JBrowse link
G Pln phospholamban ISO RGD PMID:23812383 RGD:7327175 NCBI chrNW_004936658:1,443,626...1,453,770 JBrowse link
G Pten phosphatase and tensin homolog ISO RGD PMID:18054565 RGD:2292534 NCBI chrNW_004936735:1,252,414...1,338,318 JBrowse link
G S100a8 S100 calcium binding protein A8 ISO RGD PMID:19111725 RGD:2316905 NCBI chrNW_004936580:3,256,399...3,256,913 JBrowse link
G S100a9 S100 calcium binding protein A9 ISO RGD PMID:19111725 RGD:2316905 NCBI chrNW_004936580:3,228,097...3,230,652 JBrowse link
G Slc18a2 solute carrier family 18 member A2 ISO RGD PMID:20553223 RGD:5130934 NCBI chrNW_004936486:7,075,373...7,108,984 JBrowse link
G Slc30a4 solute carrier family 30 member 4 ISO RGD PMID:12421840 RGD:2299952 NCBI chrNW_004936471:8,125,839...8,155,720 JBrowse link
G Slc30a5 solute carrier family 30 member 5 ISO (PMID:11937503) UniProtKB PMID:11937503 NCBI chrNW_004936480:418,621...454,303 JBrowse link
G Slc39a13 solute carrier family 39 member 13 ISO RGD PMID:20859692 RGD:11553849 NCBI chrNW_004936562:1,811,479...1,825,857 JBrowse link
G Sod2 superoxide dismutase 2 ISO RGD PMID:20128680 RGD:2317375 NCBI chrNW_004936489:11,178,338...11,191,601 JBrowse link
G Th tyrosine hydroxylase ISO RGD PMID:20553223 RGD:5130934 NCBI chrNW_004936794:478,651...486,887 JBrowse link
G Vcam1 vascular cell adhesion molecule 1 ISO RGD PMID:20128680 RGD:2317375 NCBI chrNW_004936748:785,491...802,791 JBrowse link
G Vim vimentin ISO RGD PMID:22017769 RGD:6480616 NCBI chrNW_004936520:10,051,692...10,059,324 JBrowse link
G Zacn zinc activated ion channel ISO (PMID:12381728) HGNC PMID:12381728 NCBI chrNW_004936594:1,240,013...1,244,488 JBrowse link
stress response to metal ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hspa5 heat shock protein family A (Hsp70) member 5 ISO RGD PMID:17915553 RGD:11354918 NCBI chrNW_004936487:13,348,465...13,352,717 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11968
    response to stimulus 6404
      response to chemical 3741
        response to inorganic substance 696
          response to metal ion 451
            cellular response to metal ion + 203
            response to aluminum ion + 10
            response to cadmium ion + 66
            response to calcium ion + 149
            response to cesium ion + 2
            response to cobalt ion + 16
            response to copper ion + 42
            response to iron ion + 49
            response to lead ion + 42
            response to lithium ion + 44
            response to magnesium ion + 30
            response to manganese ion + 35
            response to mercury ion + 19
            response to nickel cation + 4
            response to platinum ion + 4
            response to potassium ion + 24
            response to silver ion + 1
            response to zinc ion + 55
            stress response to metal ion + 4
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.