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ONTOLOGY REPORT - ANNOTATIONS


Term:response to zinc ion
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Accession:GO:0010043 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a zinc ion stimulus.
Synonyms:exact_synonym: response to zinc


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response to zinc ion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aanat aralkylamine N-acetyltransferase IDA RGD PMID:10451024 RGD:2301041 NCBI chr10:105,568,091...105,572,407
Ensembl chr10:105,568,091...105,572,403
JBrowse link
G Abcc8 ATP binding cassette subfamily C member 8 IDA RGD PMID:15613469 RGD:1598638 NCBI chr 1:102,110,708...102,191,287
Ensembl chr 1:102,110,708...102,191,287
JBrowse link
G Acp5 acid phosphatase 5, tartrate resistant IEP RGD PMID:19369052 RGD:2315901 NCBI chr 8:23,142,733...23,149,067
Ensembl chr 8:23,142,734...23,148,396
JBrowse link
G Alad aminolevulinate dehydratase IDA RGD PMID:3987589 RGD:1599024 NCBI chr 5:78,368,867...78,379,206
Ensembl chr 5:78,368,867...78,379,346
JBrowse link
G Aldob aldolase, fructose-bisphosphate B IDA RGD PMID:12721403 RGD:1599064 NCBI chr 5:64,805,772...64,818,813
Ensembl chr 5:64,805,773...64,818,824
JBrowse link
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 IEP RGD PMID:10498758 RGD:1626286 NCBI chr 4:155,386,367...155,414,034
Ensembl chr 4:155,386,711...155,401,480
JBrowse link
G Apoe apolipoprotein E IEP RGD PMID:1883846 RGD:10059683 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G Arg1 arginase 1 IEP RGD PMID:11686772 RGD:4140931 NCBI chr 1:21,525,421...21,537,872
Ensembl chr 1:21,525,421...21,537,863
JBrowse link
G Asl argininosuccinate lyase IEP RGD PMID:11686772 RGD:4140931 NCBI chr12:30,160,922...30,178,348
Ensembl chr12:30,165,694...30,178,341
JBrowse link
G Ass1 argininosuccinate synthase 1 IDA RGD PMID:11686784 RGD:1599309 NCBI chr 3:10,327,411...10,375,847
Ensembl chr 3:10,327,414...10,375,826
JBrowse link
G Atp7a ATPase copper transporting alpha IEP RGD PMID:12840169 RGD:1599394 NCBI chr  X:77,076,085...77,193,644
Ensembl chr  X:77,076,106...77,193,644
JBrowse link
G Atp7b ATPase copper transporting beta IEP RGD PMID:12840169 RGD:1599394 NCBI chr16:74,865,516...74,944,935
Ensembl chr16:74,865,516...74,945,286
JBrowse link
G Bglap bone gamma-carboxyglutamate protein IEP RGD PMID:19506366 RGD:2316166 NCBI chr 2:187,741,770...187,748,445
Ensembl chr 2:187,741,770...187,742,747
JBrowse link
G Car2 carbonic anhydrase 2 IEP RGD PMID:16140947 RGD:1600174 NCBI chr 2:88,097,740...88,112,868
Ensembl chr 2:88,097,720...88,113,029
JBrowse link
G Cps1 carbamoyl-phosphate synthase 1 IEP RGD PMID:12840196 RGD:4144099 NCBI chr 9:74,113,437...74,236,274
Ensembl chr 9:74,124,016...74,236,274
JBrowse link
G Crip1 cysteine rich protein 1 ISO
ISS
(PMID:7999070) RGD PMID:7999070, PMID:7999070 RGD:8554723 NCBI chr 6:137,959,171...137,967,042
Ensembl chr 6:137,959,171...137,967,042
JBrowse link
G Cyp3a9 cytochrome P450, family 3, subfamily a, polypeptide 9 IEP RGD PMID:11705462 RGD:11353814 NCBI chr12:19,074,288...19,114,491
Ensembl chr12:19,074,583...19,114,399
JBrowse link
G D2hgdh D-2-hydroxyglutarate dehydrogenase IDA PMID:15070399 HGNC PMID:15070399 RGD:8553974 NCBI chr 9:100,956,570...100,974,393
Ensembl chr 9:100,956,477...100,974,551
JBrowse link
G Ddx19a DEAD-box helicase 19A IEP RGD PMID:15361827 RGD:1304011 NCBI chr19:43,251,510...43,271,865
Ensembl chr19:43,217,161...43,275,287
JBrowse link
G Ggh gamma-glutamyl hydrolase IDA RGD PMID:2400760 RGD:1624346 NCBI chr 5:34,040,258...34,063,369
Ensembl chr 5:34,040,258...34,063,361
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta IDA RGD PMID:27295130 RGD:13792738 NCBI chr11:65,060,884...65,208,842
Ensembl chr11:65,066,235...65,209,268
JBrowse link
G Gsta4 glutathione S-transferase alpha 4 IEP RGD PMID:20553223 RGD:5130934 NCBI chr 8:85,497,557...85,514,732
Ensembl chr 8:85,497,557...85,518,879
JBrowse link
G Haao 3-hydroxyanthranilate 3,4-dioxygenase IEA
ISO
GO_REF:0000107
(PMID:12007609)
Ensembl
RGD
PMID:12007609 GO_REF:0000107 NCBI chr 6:7,045,145...7,059,227
Ensembl chr 6:7,045,152...7,058,314
JBrowse link
G Hamp hepcidin antimicrobial peptide IEP RGD PMID:21430246 RGD:11041613 NCBI chr 1:89,368,021...89,369,960
Ensembl chr 1:89,368,021...89,369,960
JBrowse link
G Hmbs hydroxymethylbilane synthase IEP RGD PMID:8582750 RGD:4144793 NCBI chr 8:48,667,278...48,674,673
Ensembl chr 8:48,667,275...48,674,748
JBrowse link
G Hvcn1 hydrogen voltage-gated channel 1 ISO (PMID:16554753)
(MGI:MGI:3623706|PMID:16556803)
RGD PMID:16554753, PMID:16556803 MGI:MGI:3623706 NCBI chr12:39,822,814...39,851,093
Ensembl chr12:39,822,637...39,850,567
JBrowse link
G Ireb2 iron responsive element binding protein 2 IEP RGD PMID:24024381 RGD:12904020 NCBI chr 8:59,450,974...59,503,634
Ensembl chr 8:59,420,123...59,501,118
JBrowse link
G Khk ketohexokinase IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:12721403, PMID:21873635 RGD:1599064, RGD:13792537 NCBI chr 6:26,810,577...26,821,013
Ensembl chr 6:26,810,579...26,820,959
JBrowse link
G Krt14 keratin 14 IEP RGD PMID:16140947 RGD:1600174 NCBI chr10:88,118,029...88,122,233
Ensembl chr10:88,055,823...88,122,233
JBrowse link
G Lck LCK proto-oncogene, Src family tyrosine kinase IEP RGD PMID:14652378 RGD:1600224 NCBI chr 5:147,750,976...147,779,627
Ensembl chr 5:147,750,973...147,761,983
JBrowse link
G Lta4h leukotriene A4 hydrolase IEP RGD PMID:17985342 RGD:2316582 NCBI chr 7:34,288,333...34,320,243
Ensembl chr 7:34,288,365...34,320,235
JBrowse link
G Mt1 metallothionein 1 IEP RGD PMID:17074742 RGD:6484125 NCBI chr19:11,301,991...11,303,007
Ensembl chr17:78,793,336...78,793,724
JBrowse link
G Otc ornithine carbamoyltransferase IEP RGD PMID:11686784 RGD:1599309 NCBI chr  X:13,524,804...13,601,074
Ensembl chr  X:13,524,607...13,601,069
JBrowse link
G P2rx7 purinergic receptor P2X 7 ISO MGI:MGI:2386080 (MGI:MGI:3583830|PMID:15978588), (MGI:MGI:3772417|PMID:18082965) RGD PMID:15978588, PMID:18082965 MGI:MGI:3583830, MGI:MGI:3772417 NCBI chr12:39,353,613...39,396,042
Ensembl chr12:39,353,613...39,396,042
JBrowse link
G Pam peptidylglycine alpha-amidating monooxygenase ISO (PMID:12699694) RGD PMID:12699694 NCBI chr 9:111,028,543...111,177,588
Ensembl chr 9:111,028,575...111,177,602
JBrowse link
G Pln phospholamban IDA RGD PMID:23812383 RGD:7327175 NCBI chr20:34,633,157...34,642,904
Ensembl chr20:34,633,157...34,642,904
JBrowse link
G Pten phosphatase and tensin homolog IEP RGD PMID:18054565 RGD:2292534 NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
JBrowse link
G S100a8 S100 calcium binding protein A8 IEP RGD PMID:19111725 RGD:2316905 NCBI chr 2:190,073,239...190,074,333
Ensembl chr 2:190,073,815...190,074,354
JBrowse link
G S100a9 S100 calcium binding protein A9 IEP RGD PMID:19111725 RGD:2316905 NCBI chr 2:190,097,436...190,100,209
Ensembl chr 2:190,097,554...190,100,276
JBrowse link
G Slc18a2 solute carrier family 18 member A2 IEP RGD PMID:20553223 RGD:5130934 NCBI chr 1:280,397,831...280,457,968
Ensembl chr 1:280,423,079...280,457,148
JBrowse link
G Slc30a2 solute carrier family 30 member 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:152,559,577...152,571,800
Ensembl chr 5:152,559,577...152,571,799
JBrowse link
G Slc30a3 solute carrier family 30 member 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:26,629,752...26,650,106
Ensembl chr 6:26,642,783...26,650,105
JBrowse link
G Slc30a4 solute carrier family 30 member 4 IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:12421840, PMID:21873635 RGD:2299952, RGD:13792537 NCBI chr 3:114,805,919...114,828,154
Ensembl chr 3:114,805,922...114,828,154
JBrowse link
G Slc30a5 solute carrier family 30 member 5 ISO (PMID:11937503) RGD PMID:11937503 NCBI chr 2:30,815,683...30,845,796
Ensembl chr 2:30,815,703...30,846,149
JBrowse link
G Slc30a8 solute carrier family 30 member 8 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:91,832,988...91,869,329
Ensembl chr 7:91,832,988...91,867,300
JBrowse link
G Slc39a13 solute carrier family 39 member 13 IEP RGD PMID:20859692 RGD:11553849 NCBI chr 3:79,884,524...79,892,664
Ensembl chr 3:79,884,524...79,892,429
JBrowse link
G Sod2 superoxide dismutase 2 IEP RGD PMID:20128680 RGD:2317375 NCBI chr 1:47,914,757...47,921,587
Ensembl chr 1:47,914,759...47,921,587
JBrowse link
G Th tyrosine hydroxylase IEP RGD PMID:20553223 RGD:5130934 NCBI chr 1:216,073,034...216,080,287
Ensembl chr 1:216,073,031...216,080,287
JBrowse link
G Vcam1 vascular cell adhesion molecule 1 IEP RGD PMID:20128680 RGD:2317375 NCBI chr 2:219,071,193...219,090,931
Ensembl chr 2:219,071,193...219,097,619
JBrowse link
G Vim vimentin IEP RGD PMID:22017769 RGD:6480616 NCBI chr17:80,882,715...80,891,200
Ensembl chr17:80,882,666...80,891,212
JBrowse link
cellular response to zinc ion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC128848.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr19:11,302,125...11,302,938 JBrowse link
G Creb1 cAMP responsive element binding protein 1 ISO (MGI:MGI:5492261|PMID:23716681) RGD PMID:23716681 MGI:MGI:5492261 NCBI chr 9:71,229,753...71,298,994
Ensembl chr 9:71,230,108...71,293,435
JBrowse link
G Glra1 glycine receptor, alpha 1 ISO
ISS
(PMID:16144831)
GO_REF:0000024
RGD
UniProt
PMID:16144831 GO_REF:0000024 NCBI chr10:40,851,955...40,954,364
Ensembl chr10:40,855,559...40,953,651
JBrowse link
G Glra2 glycine receptor, alpha 2 ISO
IEA
(PMID:23895467)
GO_REF:0000107
RGD
Ensembl
PMID:23895467 GO_REF:0000107 NCBI chr  X:30,612,894...30,832,078
Ensembl chr  X:30,612,903...30,831,483
JBrowse link
G Glra3 glycine receptor, alpha 3 IDA PMID:23895467 UniProt PMID:23895467 RGD:11035333 NCBI chr16:37,676,959...37,908,221
Ensembl chr16:37,676,962...38,063,821
JBrowse link
G Gpr39 G protein-coupled receptor 39 ISO MGI:MGI:3701833 (MGI:MGI:5464224|PMID:23133519), (MGI:MGI:5707553|PMID:26375174) RGD PMID:23133519, PMID:26375174 MGI:MGI:5464224, MGI:MGI:5707553 NCBI chr13:42,008,642...42,220,737
Ensembl chr13:42,008,842...42,009,738
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A IMP RGD PMID:19240037 RGD:2326029 NCBI chr10:5,707,806...6,123,568
Ensembl chr10:5,930,298...6,119,990
JBrowse link
G Hvcn1 hydrogen voltage-gated channel 1 ISO (PMID:22020278) RGD PMID:22020278 NCBI chr12:39,822,814...39,851,093
Ensembl chr12:39,822,637...39,850,567
JBrowse link
G Kcnk3 potassium two pore domain channel subfamily K member 3 IEP RGD PMID:9437008 RGD:61647 NCBI chr 6:27,154,274...27,190,209
Ensembl chr 6:27,151,612...27,190,132
JBrowse link
G Mt1 metallothionein 1 ISO
IBA
ISS
(MGI:MGI:3820854|PMID:18605988)
PMID:21873635
GO_REF:0000024
(PMID:11168427)
RGD
UniProt
PMID:11168427, PMID:18605988, PMID:21873635 GO_REF:0000024, MGI:MGI:3820854, RGD:13792537 NCBI chr19:11,301,991...11,303,007
Ensembl chr17:78,793,336...78,793,724
JBrowse link
G Mt1m metallothionein 1M IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:3,677,460...3,677,838
Ensembl chr20:3,677,474...3,677,847
JBrowse link
G Mt2A metallothionein 2A ISO
IBA
ISS
(PMID:11168427)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:11168427, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr19:11,307,966...11,308,740
Ensembl chr19:11,307,967...11,308,740
JBrowse link
G Mt3 metallothionein 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:11,324,708...11,326,112
Ensembl chr19:11,324,698...11,326,139
JBrowse link
G Mt4 metallothionein 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:11,339,767...11,341,863
Ensembl chr19:11,339,767...11,341,863
JBrowse link
G Mtf1 metal-regulatory transcription factor 1 ISO (MGI:MGI:5577232|PMID:24529376) RGD PMID:24529376 MGI:MGI:5577232 NCBI chr 5:142,797,340...142,843,896
Ensembl chr 5:142,797,366...142,842,122
JBrowse link
G P2rx4 purinergic receptor P2X 4 IDA PMID:8551329 UniProt PMID:8551329 RGD:61682 NCBI chr12:39,308,022...39,325,673
Ensembl chr12:39,308,025...39,325,673
JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 IEP RGD PMID:23582235 RGD:10414068 NCBI chr13:98,857,255...98,889,444
Ensembl chr13:98,857,177...98,889,716
JBrowse link
G Tspo translocator protein IEP RGD PMID:18709649 RGD:2317141 NCBI chr 7:124,460,358...124,470,610
Ensembl chr 7:124,460,358...124,470,609
JBrowse link
G Znf658 zinc finger protein 658 ISO (PMID:25582195) RGD PMID:25582195 NCBI chr13:13,579,706...13,734,552 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    response to stimulus 10568
      response to chemical 6330
        response to inorganic substance 818
          response to metal ion 514
            response to zinc ion 67
              cellular response to zinc ion 19
              stress response to zinc ion + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.