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ONTOLOGY REPORT - ANNOTATIONS


Term:proteasomal protein catabolic process
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Accession:GO:0010498 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds that is mediated by the proteasome.
Synonyms:exact_synonym: proteasome-mediated protein catabolic process;   proteasome-mediated protein catabolism


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proteasomal protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07045621.1 RGD:13792537
G Ate1 arginyltransferase 1 JBrowse link 1
1
200,810,741
200,958,564
200,885,593
201,082,100
RGD:1624291
RGD:1600115
G Bag6 BAG cochaperone 6 JBrowse link 20 5,124,512 5,138,084 RGD:1624291
RGD:1600115
G Cul4b cullin 4B JBrowse link X 124,831,391 124,870,329 RGD:1624291
G Ddb1 damage-specific DNA binding protein 1 JBrowse link 1 226,657,561 226,683,356 RGD:1624291
G Ddi1 DNA-damage inducible 1 homolog 1 JBrowse link 8 4,547,725 4,549,573 RGD:1600115
RGD:1624291
G Ddi2 DNA damage inducible 1 homolog 2 JBrowse link 5 160,230,958 160,282,836 RGD:1624291
G Fbxo44 F-box protein 44 JBrowse link 5 164,962,921 164,972,273 RGD:1624291
G LOC100360846 proteasome subunit beta type 6-like JBrowse link 2 96,031,967 96,033,538 RGD:13792537
G Marchf6 membrane associated ring-CH-type finger 6 JBrowse link 2 84,533,546 84,608,743 RGD:1624291
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 JBrowse link 10 86,683,875 86,690,815 RGD:1600115
RGD:1624291
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 JBrowse link 18 62,159,128 62,179,635 RGD:1624291
G Pmp22 peripheral myelin protein 22 JBrowse link 10 49,538,588 49,568,583 RGD:1624291
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:1624291
G Prpf19 pre-mRNA processing factor 19 JBrowse link 1 226,947,065 226,958,147 RGD:1624291
RGD:1600115
G Psma1 proteasome 20S subunit alpha 1 JBrowse link 1 183,733,567 183,744,586 RGD:13792537
G Psma2 proteasome 20S subunit alpha 2 JBrowse link 17 53,091,937 53,102,324 RGD:13792537
G Psma3 proteasome 20S subunit alpha 3 JBrowse link 6 93,423,029 93,444,223 RGD:13792537
G Psma3l proteasome subunit alpha type 3-like RGD:13792537
G Psma4 proteasome 20S subunit alpha 4 JBrowse link 8 59,532,456 59,539,916 RGD:13792537
G Psma5 proteasome 20S subunit alpha 5 JBrowse link 2 211,050,344 211,073,706 RGD:13792537
G Psma6 proteasome 20S subunit alpha 6 JBrowse link 6 76,174,460 76,205,429 RGD:13792537
G Psma7 proteasome 20S subunit alpha 7 JBrowse link 3 175,420,042 175,426,384 RGD:13792537
G Psma8 proteasome 20S subunit alpha 8 JBrowse link 18 6,114,757 6,182,393 RGD:13792537
G Psmb1 proteasome 20S subunit beta 1 JBrowse link 1 57,470,878 57,491,359 RGD:13792537
G Psmb10 proteasome 20S subunit beta 10 JBrowse link 19 37,909,543 37,912,027 RGD:13792537
G Psmb11 proteasome subunit beta 11 JBrowse link 15 33,267,413 33,273,587 RGD:13792537
G Psmb2 proteasome 20S subunit beta 2 JBrowse link 5 144,702,004 144,734,220 RGD:13792537
G Psmb3 proteasome 20S subunit beta 3 JBrowse link 10 85,646,646 85,653,729 RGD:13792537
G Psmb4 proteasome 20S subunit beta 4 JBrowse link 2 196,043,546 196,046,320 RGD:13792537
G Psmb5 proteasome 20S subunit beta 5 JBrowse link 15 33,259,039 33,263,634 RGD:13792537
G Psmb6 proteasome 20S subunit beta 6 JBrowse link 10 57,131,339 57,133,685 RGD:13792537
G Psmb7 proteasome 20S subunit beta 7 JBrowse link 3 22,890,072 22,951,718 RGD:13792537
G Psmb8 proteasome 20S subunit beta 8 JBrowse link 20 3,990,809 3,993,772 RGD:13792537
G Psmb9 proteasome 20S subunit beta 9 JBrowse link 20 3,973,424 3,978,845 RGD:13792537
G Rnf41 ring finger protein 41 JBrowse link 7 2,827,242 2,854,230 RGD:1624291
RGD:1600115
G Socs6 suppressor of cytokine signaling 6 JBrowse link 18 85,962,729 85,981,125 RGD:1624291
RGD:1600115
G Vcp valosin-containing protein JBrowse link 5 58,426,548 58,445,953 RGD:1624291
RGD:1600115
G Vhl von Hippel-Lindau tumor suppressor JBrowse link 4 145,580,869 145,587,835 RGD:1624291
RGD:1600115
anaphase-promoting complex-dependent catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Anapc1 anaphase promoting complex subunit 1 JBrowse link 3 121,147,484 121,226,125 RGD:13792537
G Anapc10 anaphase promoting complex subunit 10 JBrowse link 19 31,814,686 31,867,928 RGD:1600115
G Anapc4 anaphase promoting complex subunit 4 JBrowse link 14 60,471,962 60,503,803 RGD:13792537
G Anapc5 anaphase-promoting complex subunit 5 JBrowse link 12 39,209,134 39,242,696 RGD:13792537
G Anapc7 anaphase promoting complex subunit 7 JBrowse link 12 39,613,898 39,641,999 RGD:13792537
G Cdc16 cell division cycle 16 JBrowse link 16 81,493,355 81,516,493 RGD:13792537
G Cdc20 cell division cycle 20 JBrowse link 5 137,260,728 137,264,931 RGD:1624291
RGD:1600115
G Cdc23 cell division cycle 23 JBrowse link 18 27,430,924 27,452,569 RGD:13792537
G Cdc26 cell division cycle 26 JBrowse link 5 78,252,168 78,267,137 RGD:1600115
G Cdc27 cell division cycle 27 JBrowse link 10 92,551,754 92,602,214 RGD:13792537
G Cul3 cullin 3 JBrowse link 9 86,044,485 86,129,066 RGD:1600115
RGD:1624291
G Ecrg4 ECRG4 augurin precursor JBrowse link 9 50,526,811 50,548,056 RGD:1624291
RGD:13792537
G Fbxo31 F-box protein 31 JBrowse link 19 53,487,610 53,625,673 RGD:1624291
RGD:1600115
G Fzr1 fizzy and cell division cycle 20 related 1 JBrowse link 7 11,201,690 11,213,614 RGD:1624291
RGD:1600115
G Ube2c ubiquitin-conjugating enzyme E2C JBrowse link 3 161,236,971 161,239,371 RGD:1624291
RGD:13792537
G Ube2s ubiquitin-conjugating enzyme E2S JBrowse link 1 72,580,424 72,584,484 RGD:1600115
RGD:1624291
cytoplasm protein quality control by the ubiquitin-proteasome system term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rnf126 ring finger protein 126 JBrowse link 7 12,820,796 12,828,325 RGD:1624291
RGD:1600115
ER-associated misfolded protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bag6 BAG cochaperone 6 JBrowse link 20 5,124,512 5,138,084 RGD:1600115
RGD:1624291
G Derl1 derlin 1 JBrowse link 7 97,737,176 97,759,852 RGD:1624291
RGD:1600115
G Pomt2 protein-O-mannosyltransferase 2 JBrowse link 6 111,137,329 111,176,991 RGD:13792537
G Rnf185 ring finger protein 185 JBrowse link 14 83,648,400 83,685,273 RGD:13792537
G Rnf5 ring finger protein 5 JBrowse link 20 4,366,244 4,368,690 RGD:1624291
RGD:13792537
G Sdf2l1 stromal cell-derived factor 2-like 1 JBrowse link 11 88,122,271 88,124,513 RGD:8554667
G Tor1a torsin family 1, member A JBrowse link 3 9,800,322 9,807,318 RGD:1624291
RGD:1600115
G Ufd1 ubiquitin recognition factor in ER associated degradation 1 JBrowse link 11 86,304,836 86,328,478 RGD:1624291
RGD:13792537
RGD:1600115
G Uggt1 UDP-glucose glycoprotein glucosyltransferase 1 JBrowse link 9 42,692,156 42,805,680 RGD:13792537
G Vcp valosin-containing protein JBrowse link 5 58,426,548 58,445,953 RGD:1624291
RGD:13792537
ERAD pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Brsk2 BR serine/threonine kinase 2 JBrowse link 1 214,918,757 214,940,883 RGD:1624291
RGD:1600115
G Ccdc47 coiled-coil domain containing 47 JBrowse link 10 94,388,425 94,406,949 RGD:1600115
RGD:1624291
G Derl1 derlin 1 JBrowse link 7 97,737,176 97,759,852 RGD:1624291
G Dnajb12 DnaJ heat shock protein family (Hsp40) member B12 JBrowse link 20 29,445,510 29,463,739 RGD:1624291
G Rcn3 reticulocalbin 3 JBrowse link 1 101,076,971 101,086,198 RGD:1600115
RGD:1624291
G Rhbdd1 rhomboid domain containing 1 JBrowse link 9 88,110,731 88,229,462 RGD:1624291
RGD:1600115
G Rnf139 ring finger protein 139 JBrowse link 7 98,770,840 98,782,025 RGD:1624291
RGD:13792537
G Rnf185 ring finger protein 185 JBrowse link 14 83,648,400 83,685,273 RGD:1624291
G Rnf5 ring finger protein 5 JBrowse link 20 4,366,244 4,368,690 RGD:1624291
G Sel1l SEL1L adaptor subunit of ERAD E3 ubiquitin ligase JBrowse link 6 115,572,683 115,616,904 RGD:1624291
RGD:1600115
G Syvn1 synoviolin 1 JBrowse link 1 221,409,281 221,416,229 RGD:1624291
G Ubxn6 UBX domain protein 6 JBrowse link 9 10,995,516 11,000,643 RGD:1624291
RGD:1600115
G Vcp valosin-containing protein JBrowse link 5 58,426,548 58,445,953 RGD:1600115
RGD:1624291
maintenance of unfolded protein involved in ERAD pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bag6 BAG cochaperone 6 JBrowse link 20 5,124,512 5,138,084 RGD:1624291
RGD:1600115
G Get4 guided entry of tail-anchored proteins factor 4 JBrowse link 12 17,469,112 17,486,709 RGD:1624291
RGD:1600115
G Usp13 ubiquitin specific peptidase 13 JBrowse link 2 119,197,153 119,317,507 RGD:1624291
RGD:1600115
mannose trimming involved in glycoprotein ERAD pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 JBrowse link 4 140,886,644 140,918,654 RGD:1624291
RGD:1600115
G Edem2 ER degradation enhancing alpha-mannosidase like protein 2 JBrowse link 3 151,232,741 151,258,559 RGD:1624291
RGD:1600115
G Edem3 ER degradation enhancing alpha-mannosidase like protein 3 JBrowse link 13 69,135,095 69,197,708 RGD:1624291
RGD:1600115
G Man1b1 mannosidase, alpha, class 1B, member 1 JBrowse link 3 2,547,259 2,569,051 RGD:1624291
RGD:1600115
membrane protein proteolysis involved in retrograde protein transport, ER to cytosol term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hm13 histocompatibility minor 13 JBrowse link 3 148,150,695 148,189,623 RGD:1624291
RGD:1600115
G Rhbdd1 rhomboid domain containing 1 JBrowse link 9 88,110,731 88,229,462 RGD:1624291
RGD:1600115
mitochondria-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ankzf1 ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1 JBrowse link 9 82,393,619 82,400,537 RGD:13792537
negative regulation of ER-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sgta small glutamine rich tetratricopeptide repeat containing alpha JBrowse link 7 11,521,949 11,538,691 RGD:1624291
RGD:1600115
G Svip small VCP interacting protein JBrowse link 1 107,368,117 107,373,807 RGD:10047192
RGD:1624291
G Usp14 ubiquitin specific peptidase 14 JBrowse link 18 1,178,785 1,216,573 RGD:1624291
RGD:1600115
negative regulation of ERAD pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aqp11 aquaporin 11 JBrowse link 1 162,703,394 162,713,560 RGD:1600115
G Ubxn1 UBX domain protein 1 JBrowse link 1 225,067,953 225,071,944 RGD:1624291
RGD:1600115
G Usp25 ubiquitin specific peptidase 25 JBrowse link 11 15,436,080 15,558,646 RGD:1624291
negative regulation of proteasomal protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Alad aminolevulinate dehydratase JBrowse link 5 78,368,867 78,379,206 RGD:1624291
RGD:1600115
G F8a1 coagulation factor VIII-associated 1 JBrowse link 1 147,021,436 147,022,950 RGD:1624291
RGD:1600115
G Gabarapl2 GABA type A receptor associated protein like 2 JBrowse link 19 44,164,935 44,175,771 RGD:1624291
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 JBrowse link 9 17,817,791 17,823,163 RGD:13514081
RGD:1624291
G Lamp3 lysosomal-associated membrane protein 3 JBrowse link 11 84,930,965 85,000,694 RGD:1624291
G Marchf7 membrane associated ring-CH-type finger 7 JBrowse link 3 46,284,961 46,325,230 RGD:1624291
RGD:1600115
G Ophn1 oligophrenin 1 JBrowse link X 68,185,865 68,579,518 RGD:1624291
RGD:13792537
G Prkcg protein kinase C, gamma JBrowse link 1 64,407,098 64,433,698 RGD:1624291
RGD:1600115
G Psme3ip1 proteasome activator subunit 3 interacting protein 1 JBrowse link 19 10,827,057 10,856,747 RGD:1600115
RGD:1624291
G Psmf1 proteasome inhibitor subunit 1 JBrowse link 3 147,238,111 147,263,275 RGD:1600115
RGD:1624291
G Sco1 synthesis of cytochrome C oxidase 1 JBrowse link 10 53,595,854 53,608,437 RGD:1624291
RGD:1600115
G Usp19 ubiquitin specific peptidase 19 JBrowse link 8 117,280,690 117,291,729 RGD:1624291
RGD:1600115
negative regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bag5 BAG cochaperone 5 JBrowse link 6 136,180,640 136,185,651 RGD:1624291
G Bag6 BAG cochaperone 6 JBrowse link 20 5,124,512 5,138,084 RGD:1624291
RGD:1600115
G Camlg calcium modulating ligand JBrowse link 17 9,523,792 9,534,683 RGD:1600115
RGD:1624291
G Ccar2 cell cycle and apoptosis regulator 2 JBrowse link 15 51,818,887 51,834,443 RGD:1624291
RGD:1600115
G Clec16a C-type lectin domain containing 16A JBrowse link 10 5,002,196 5,196,914 RGD:1624291
RGD:1600115
G Ddrgk1 DDRGK domain containing 1 JBrowse link 3 123,195,580 123,206,828 RGD:1600115
RGD:1624291
G Fhit fragile histidine triad diadenosine triphosphatase JBrowse link 15 15,697,292 16,862,873 RGD:1624291
RGD:1600115
G Gipc1 GIPC PDZ domain containing family, member 1 JBrowse link 19 24,786,604 24,798,231 RGD:1624291
RGD:1600115
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 JBrowse link 9 17,817,791 17,823,163 RGD:1600115
RGD:1624291
G Klhl40 kelch-like family member 40 JBrowse link 8 130,416,265 130,421,871 RGD:1624291
RGD:13792537
G Map1a microtubule-associated protein 1A JBrowse link 3 113,251,918 113,272,193 RGD:1624291
G Mtm1 myotubularin 1 JBrowse link 6 18,821,821 18,840,449 RGD:1624291
G N4bp1 Nedd4 binding protein 1 JBrowse link 19 21,218,123 21,268,539 RGD:1624291
RGD:1600115
G Nop53 NOP53 ribosome biogenesis factor JBrowse link 1 77,836,522 77,843,991 RGD:1624291
RGD:1600115
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase JBrowse link X 71,540,870 71,585,906 RGD:1600115
RGD:1624291
G Park7 Parkinsonism associated deglycase JBrowse link 5 167,982,438 168,004,724 RGD:1624291
RGD:1600115
G Pbk PDZ binding kinase JBrowse link 15 42,489,253 42,500,377 RGD:1624291
RGD:1600115
G Rpl11 ribosomal protein L11 JBrowse link 5 154,390,809 154,394,412 RGD:1624291
RGD:1600115
G Rybp RING1 and YY1 binding protein JBrowse link 4 132,689,623 132,740,823 RGD:1624291
RGD:1600115
G Sdcbp syndecan binding protein JBrowse link 5 19,471,664 19,498,499 RGD:1624291
RGD:1600115
G Senp1 SUMO specific peptidase 1 JBrowse link 7 139,626,444 139,684,587 RGD:1624291
G Shh sonic hedgehog signaling molecule JBrowse link 4 718,538 727,691 RGD:1624291
RGD:1600115
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 JBrowse link 8 118,206,678 118,326,264 RGD:1624291
RGD:1600115
G Taf9 TATA-box binding protein associated factor 9 JBrowse link 2 30,664,407 30,668,414 RGD:1624291
G Tlk2 tousled-like kinase 2 JBrowse link 10 93,410,181 93,507,277 RGD:1624291
RGD:1600115
G Trim39 tripartite motif-containing 39 JBrowse link 20 2,500,691 2,514,546 RGD:1600115
RGD:1624291
G Ubxn1 UBX domain protein 1 JBrowse link 1 225,067,953 225,071,944 RGD:1624291
RGD:1600115
G Uchl5 ubiquitin C-terminal hydrolase L5 JBrowse link 13 60,568,102 60,603,812 RGD:1624291
G Usp7 ubiquitin specific peptidase 7 JBrowse link 10 6,930,462 7,019,910 RGD:1600115
RGD:1624291
G Wac WW domain containing adaptor with coiled-coil JBrowse link 17 60,887,606 60,946,630 RGD:1624291
RGD:1600115
negative regulation of retrograde protein transport, ER to cytosol term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Derl2 derlin 2 JBrowse link 10 57,641,682 57,653,554 RGD:1624291
RGD:1600115
G Derl3 derlin 3 JBrowse link 20 13,692,102 13,707,645 RGD:1624291
G Erlec1 endoplasmic reticulum lectin 1 JBrowse link 14 115,314,890 115,352,871 RGD:1624291
RGD:1600115
G Os9 OS9, endoplasmic reticulum lectin JBrowse link 7 70,378,625 70,407,135 RGD:1624291
RGD:1600115
G Svip small VCP interacting protein JBrowse link 1 107,368,117 107,373,807 RGD:1624291
RGD:1600115
G Ubac2 UBA domain containing 2 JBrowse link 15 108,286,407 108,433,531 RGD:1624291
RGD:1600115
G Ube2g2 ubiquitin-conjugating enzyme E2G 2 JBrowse link 20 11,700,089 11,721,823 RGD:1624291
RGD:1600115
G Ube2j1 ubiquitin-conjugating enzyme E2, J1 JBrowse link 5 48,274,387 48,292,699 RGD:1624291
RGD:1600115
G Yod1 YOD1 deubiquitinase JBrowse link 13 47,441,296 47,443,013 RGD:1600115
RGD:1624291
negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Styx serine/threonine/tyrosine interacting protein JBrowse link 15 19,690,079 19,720,683 RGD:1624291
RGD:13792537
nuclear protein quality control by the ubiquitin-proteasome system term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ankzf1 ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1 JBrowse link 9 82,393,619 82,400,537 RGD:13792537
G Cul3 cullin 3 JBrowse link 9 86,044,485 86,129,066 RGD:1600115
RGD:1624291
G Klhl15 kelch-like family member 15 JBrowse link X 63,342,277 63,390,915 RGD:1624291
RGD:1600115
positive regulation of ER-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcap31 B-cell receptor-associated protein 31 JBrowse link X 157,094,365 157,126,397 RGD:1624291
RGD:1600115
G Cav1 caveolin 1 JBrowse link 4 44,597,123 44,630,206 RGD:1600115
RGD:1624291
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 JBrowse link 19 11,046,905 11,057,440 RGD:10047316
RGD:1624291
G Sgta small glutamine rich tetratricopeptide repeat containing alpha JBrowse link 7 11,521,949 11,538,691 RGD:1624291
RGD:1600115
G Ubqln1 ubiquilin 1 JBrowse link 17 6,840,441 6,878,842 RGD:1600115
RGD:1624291
G Ubqln2 ubiquilin 2 JBrowse link X 18,723,313 18,726,732 RGD:1624291
RGD:1600115
positive regulation of ERAD pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atxn3 ataxin 3 JBrowse link 6 125,817,420 125,853,461 RGD:1624291
G Bag6 BAG cochaperone 6 JBrowse link 20 5,124,512 5,138,084 RGD:1624291
RGD:1600115
G Rnf185 ring finger protein 185 JBrowse link 14 83,648,400 83,685,273 RGD:1600115
RGD:1624291
G Rnft1 ring finger protein, transmembrane 1 JBrowse link 10 73,807,455 73,821,178 RGD:1600115
RGD:1624291
G Tmem259 transmembrane protein 259 JBrowse link 7 12,771,239 12,777,901 RGD:1624291
RGD:13792537
G Tmem67 transmembrane protein 67 JBrowse link 5 25,666,138 25,721,056 RGD:8554391
G Usp13 ubiquitin specific peptidase 13 JBrowse link 2 119,197,153 119,317,507 RGD:1624291
RGD:1600115
positive regulation of proteasomal protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bag2 BAG cochaperone 2 JBrowse link 9 38,456,487 38,467,120 RGD:1624291
RGD:1600115
G Dab2ip DAB2 interacting protein JBrowse link 3 14,889,263 15,060,286 RGD:1600115
RGD:1624291
G Ddrgk1 DDRGK domain containing 1 JBrowse link 3 123,195,580 123,206,828 RGD:1624291
G Ecscr endothelial cell surface expressed chemotaxis and apoptosis regulator JBrowse link 18 28,507,167 28,516,567 RGD:1624291
RGD:13792537
G Fbxw7 F-box and WD repeat domain containing 7 JBrowse link 2 184,230,191 184,309,805 RGD:1624291
RGD:1600115
G Fmr1 FMRP translational regulator 1 JBrowse link X 154,684,924 154,722,369 RGD:1624291
RGD:1600115
G Kcne2 potassium voltage-gated channel subfamily E regulatory subunit 2 JBrowse link 11 32,434,786 32,447,264 RGD:1624291
RGD:1600115
G Nupr1 nuclear protein 1, transcriptional regulator JBrowse link 1 194,767,484 194,769,519 RGD:1624291
RGD:1600115
G Osbpl7 oxysterol binding protein-like 7 JBrowse link 10 84,986,330 85,003,947 RGD:1624291
RGD:1600115
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:1624291
G Psmc1 proteasome 26S subunit, ATPase 1 JBrowse link 6 124,123,283 124,135,644 RGD:1600115
G Psmc2 proteasome 26S subunit, ATPase 2 JBrowse link 4 9,867,132 9,881,383 RGD:1600115
G Psmc4 proteasome 26S subunit, ATPase 4 JBrowse link 1 84,978,220 84,986,536 RGD:1600115
G Rnf40 ring finger protein 40 JBrowse link 1 199,037,472 199,052,823 RGD:633892
G Tmtc3 transmembrane O-mannosyltransferase targeting cadherins 3 JBrowse link 7 40,171,957 40,217,056 RGD:1624291
RGD:1600115
G Trem2 triggering receptor expressed on myeloid cells 2 JBrowse link 9 14,611,541 14,618,076 RGD:1624291
G Xbp1 X-box binding protein 1 JBrowse link 14 85,753,736 85,758,820 RGD:1624291
positive regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AC135026.1 RGD:13792537
G Akt1 AKT serine/threonine kinase 1 JBrowse link 6 137,218,398 137,239,970 RGD:1624291
RGD:1600115
G Ankib1 ankyrin repeat and IBR domain containing 1 JBrowse link 4 27,473,477 27,597,206 RGD:13792537
G Arih1 ariadne RBR E3 ubiquitin protein ligase 1 JBrowse link 8 64,166,359 64,268,555 RGD:13792537
G Arih2 ariadne RBR E3 ubiquitin protein ligase 2 JBrowse link 8 117,387,004 117,446,085 RGD:13792537
G Atg7 autophagy related 7 JBrowse link 4 146,570,113 146,777,093 RGD:1624291
G Aurka aurora kinase A JBrowse link 3 170,364,177 170,380,278 RGD:1624291
RGD:1600115
G Axin1 axin 1 RGD:1624291
G Bag2 BAG cochaperone 2 JBrowse link 9 38,456,487 38,467,120 RGD:1624291
G Bbs7 Bardet-Biedl syndrome 7 JBrowse link 2 123,283,402 123,322,991 RGD:1624291
RGD:1600115
G Cbfa2t3 CBFA2/RUNX1 partner transcriptional co-repressor 3 JBrowse link 19 55,438,409 55,510,652 RGD:1624291
RGD:1600115
G Chfr checkpoint with forkhead and ring finger domains JBrowse link 12 52,562,594 52,596,162 RGD:1624291
RGD:1600115
G Clu clusterin JBrowse link 15 42,626,612 42,665,858 RGD:1600115
RGD:13792537
RGD:1624291
G Cop1 COP1, E3 ubiquitin ligase JBrowse link 13 76,942,883 77,076,015 RGD:1624291
RGD:1600115
G Csnk1a1 casein kinase 1, alpha 1 JBrowse link 18 56,887,722 56,910,610 RGD:1624291
RGD:1600115
G Csnk1d casein kinase 1, delta JBrowse link 10 110,147,786 110,182,413 RGD:1624291
RGD:13792537
RGD:1600115
G Csnk1e casein kinase 1, epsilon JBrowse link 7 120,651,976 120,675,559 RGD:1624291
RGD:1600115
G Dab2 DAB adaptor protein 2 JBrowse link 2 55,747,353 55,768,848 RGD:1624291
RGD:1600115
G Dda1 DET1 and DDB1 associated 1 JBrowse link 16 19,877,873 19,885,501 RGD:13792537
G Ddrgk1 DDRGK domain containing 1 JBrowse link 3 123,195,580 123,206,828 RGD:1624291
RGD:1600115
G Det1 DET1 partner of COP1 E3 ubiquitin ligase JBrowse link 1 140,519,755 140,535,969 RGD:1624291
G Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 JBrowse link 9 82,436,453 82,444,669 RGD:1624291
RGD:13792537
G Dvl1 dishevelled segment polarity protein 1 JBrowse link 5 173,295,948 173,308,014 RGD:1624291
RGD:1600115
G Fam122a family with sequence similarity 122A JBrowse link 1 242,372,458 242,373,764 RGD:1600115
RGD:1624291
G Fbxo22 F-box protein 22 JBrowse link 8 59,770,032 59,786,061 RGD:1624291
RGD:1600115
G Gba glucosylceramidase beta JBrowse link 2 188,511,781 188,522,602 RGD:1624291
RGD:1600115
G Gclc glutamate-cysteine ligase, catalytic subunit JBrowse link 8 85,059,051 85,097,471 RGD:1624291
RGD:1600115
G Gsk3a glycogen synthase kinase 3 alpha JBrowse link 1 82,097,244 82,108,238 RGD:1624291
RGD:13792537
G Gsk3b glycogen synthase kinase 3 beta JBrowse link 11 65,060,884 65,208,842 RGD:1624291
RGD:13792537
RGD:1600115
G Hspa1a heat shock protein family A (Hsp70) member 1A JBrowse link 20 4,875,834 4,881,751 RGD:1624291
RGD:13792537
G Hspa1b heat shock protein family A (Hsp70) member 1B JBrowse link 20 4,877,638 4,880,112 RGD:1624291
RGD:13792537
G Hspbp1 HSPA (Hsp70) binding protein 1 JBrowse link 1 72,732,418 72,756,087 RGD:1624291
RGD:1600115
G Il33 interleukin 33 JBrowse link 1 248,112,611 248,147,030 RGD:1624291
RGD:1600115
G Klhl40 kelch-like family member 40 JBrowse link 8 130,416,265 130,421,871 RGD:1624291
G LOC108348108 heat shock 70 kDa protein 1A JBrowse link 20 2,699,707 2,701,856 RGD:13792537
G Lrrk2 leucine-rich repeat kinase 2 JBrowse link 7 132,857,311 133,018,549 RGD:1624291
RGD:1600115
G Mdm2 MDM2 proto-oncogene JBrowse link 7 60,719,060 60,743,618 RGD:1624291
RGD:1600115
G Nkd2 NKD inhibitor of WNT signaling pathway 2 JBrowse link 1 32,054,390 32,085,416 RGD:1624291
RGD:1600115
G Nop53 NOP53 ribosome biogenesis factor JBrowse link 1 77,836,522 77,843,991 RGD:1624291
RGD:1600115
G Nub1 negative regulator of ubiquitin-like proteins 1 JBrowse link 4 6,950,870 6,981,400 RGD:1624291
G Pias1 protein inhibitor of activated STAT, 1 JBrowse link 8 67,771,720 67,869,015 RGD:1624291
RGD:1600115
G Plk1 polo-like kinase 1 JBrowse link 1 192,115,990 192,125,969 RGD:1600115
RGD:1624291
G Plk2 polo-like kinase 2 JBrowse link 2 41,911,143 41,916,901 RGD:7241135
G Prickle1 prickle planar cell polarity protein 1 JBrowse link 7 134,702,964 134,799,437 RGD:1624291
RGD:1600115
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:1624291
RGD:13792537
G Psen1 presenilin 1 JBrowse link 6 107,169,514 107,221,000 RGD:1624291
RGD:1600115
G Psen2 presenilin 2 JBrowse link 13 98,513,600 98,539,347 RGD:1624291
G Psmd10 proteasome 26S subunit, non-ATPase 10 JBrowse link X 112,323,188 112,328,642 RGD:1624291
RGD:1600115
G Rack1 receptor for activated C kinase 1 JBrowse link 10 34,149,717 34,155,198 RGD:1624291
RGD:1600115
G Rad23a RAD23 homolog A, nucleotide excision repair protein JBrowse link 19 25,949,488 25,956,677 RGD:1624291
RGD:1600115
G Rbx1 ring-box 1 JBrowse link 7 122,700,849 122,710,907 RGD:1624291
RGD:1600115
G Rchy1 ring finger and CHY zinc finger domain containing 1 JBrowse link 14 17,615,968 17,631,715 RGD:1624291
G Rnf14 ring finger protein 14 JBrowse link 18 31,443,424 31,468,641 RGD:13792537
G Rnf144a ring finger protein 144A JBrowse link 6 45,509,895 45,629,233 RGD:13792537
G Rnf144b ring finger protein 144B JBrowse link 17 17,817,122 17,947,777 RGD:13792537
G Rnf180 ring finger protein 180 JBrowse link 2 35,718,100 35,892,578 RGD:1624291
RGD:1600115
G Rnf19a ring finger protein 19A, RBR E3 ubiquitin protein ligase JBrowse link 7 75,058,758 75,098,331 RGD:13792537
G Rnf19b ring finger protein 19B JBrowse link 5 147,246,032 147,270,892 RGD:13792537
G Rnf217 ring finger protein 217 JBrowse link 1 28,301,960 28,391,582 RGD:13792537
G Sh3rf2 SH3 domain containing ring finger 2 JBrowse link 18 36,371,041 36,471,020 RGD:13673844
RGD:1624291
G Sirt2 sirtuin 2 JBrowse link 1 86,948,866 86,971,954 RGD:1624291
RGD:1600115
G Smad7 SMAD family member 7 JBrowse link 18 71,395,830 71,424,164 RGD:1624291
RGD:1600115
G Socs5 suppressor of cytokine signaling 5 JBrowse link 6 10,671,311 10,705,610 RGD:1624291
RGD:1600115
G Stub1 STIP1 homology and U-box containing protein 1 JBrowse link 10 15,197,754 15,200,035 RGD:1624291
RGD:1600115
G Sumo1 small ubiquitin-like modifier 1 JBrowse link 9 66,453,428 66,483,614 RGD:1624291
RGD:1600115
G Sumo2 small ubiquitin-like modifier 2 JBrowse link 10 104,085,401 104,097,983 RGD:1624291
G Taf1 TATA-box binding protein associated factor 1 JBrowse link X 71,412,291 71,486,456 RGD:1624291
G Trib1 tribbles pseudokinase 1 JBrowse link 7 99,954,492 99,961,026 RGD:1624291
RGD:13792537
G Trib2 tribbles pseudokinase 2 JBrowse link 6 41,016,722 41,040,972 RGD:1624291
RGD:13792537
G Trib3 tribbles pseudokinase 3 JBrowse link 3 147,814,056 147,819,650 RGD:13792537
G Ube2v2 ubiquitin conjugating enzyme E2 V2 JBrowse link 11 89,557,273 89,591,175 RGD:1299567
G Usp5 ubiquitin specific peptidase 5 JBrowse link 4 157,332,735 157,347,803 RGD:1624291
RGD:1600115
G Vcp valosin-containing protein JBrowse link 5 58,426,548 58,445,953 RGD:1599730
RGD:1624291
G Zer1 zyg-11 related, cell cycle regulator JBrowse link 3 8,662,579 8,690,486 RGD:1624291
RGD:1600115
G Zfand2a zinc finger AN1-type containing 2A JBrowse link 12 17,252,093 17,263,477 RGD:1624291
RGD:1600115
G Zyg11b zyg-11 family member B, cell cycle regulator JBrowse link 5 127,844,062 127,878,792 RGD:1624291
RGD:1600115
positive regulation of proteasomal ubiquitin-dependent protein catabolic process involved in cellular response to hypoxia term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Plk3 polo-like kinase 3 JBrowse link 5 135,997,725 136,002,900 RGD:1624291
RGD:1600115
G Sirt2 sirtuin 2 JBrowse link 1 86,948,866 86,971,954 RGD:1600115
RGD:1624291
positive regulation of retrograde protein transport, ER to cytosol term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcap31 B-cell receptor-associated protein 31 JBrowse link X 157,094,365 157,126,397 RGD:1624291
RGD:1600115
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 JBrowse link 4 140,886,644 140,918,654 RGD:1624291
RGD:1600115
G Edem2 ER degradation enhancing alpha-mannosidase like protein 2 JBrowse link 3 151,232,741 151,258,559 RGD:1624291
RGD:1600115
positive regulation of transcription factor catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fbxw8 F-box and WD repeat domain containing 8 JBrowse link 12 44,046,204 44,138,138 RGD:1600115
RGD:1624291
G Mapk8 mitogen-activated protein kinase 8 JBrowse link 16 9,620,854 9,709,342 RGD:1624291
G Mapk9 mitogen-activated protein kinase 9 JBrowse link 10 35,333,859 35,374,364 RGD:1600115
RGD:1624291
G Sirt6 sirtuin 6 JBrowse link 7 10,937,622 10,943,048 RGD:1600115
RGD:1624291
proteasomal ubiquitin-independent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07045621.1 RGD:13792537
G Enc1 ectodermal-neural cortex 1 JBrowse link 2 28,049,217 28,061,023 RGD:1624291
RGD:13792537
G LOC100360846 proteasome subunit beta type 6-like JBrowse link 2 96,031,967 96,033,538 RGD:13792537
G Nfe2l2 nuclear factor, erythroid 2-like 2 JBrowse link 3 62,497,568 62,525,146 RGD:1624291
RGD:1600115
G Psma1 proteasome 20S subunit alpha 1 JBrowse link 1 183,733,567 183,744,586 RGD:13792537
G Psma2 proteasome 20S subunit alpha 2 JBrowse link 17 53,091,937 53,102,324 RGD:13792537
G Psma3 proteasome 20S subunit alpha 3 JBrowse link 6 93,423,029 93,444,223 RGD:13792537
G Psma3l proteasome subunit alpha type 3-like RGD:13792537
G Psma4 proteasome 20S subunit alpha 4 JBrowse link 8 59,532,456 59,539,916 RGD:13792537
G Psma5 proteasome 20S subunit alpha 5 JBrowse link 2 211,050,344 211,073,706 RGD:13792537
G Psma6 proteasome 20S subunit alpha 6 JBrowse link 6 76,174,460 76,205,429 RGD:13792537
G Psma7 proteasome 20S subunit alpha 7 JBrowse link 3 175,420,042 175,426,384 RGD:13792537
G Psma8 proteasome 20S subunit alpha 8 JBrowse link 18 6,114,757 6,182,393 RGD:13792537
G Psmb1 proteasome 20S subunit beta 1 JBrowse link 1 57,470,878 57,491,359 RGD:13792537
G Psmb10 proteasome 20S subunit beta 10 JBrowse link 19 37,909,543 37,912,027 RGD:13792537
G Psmb11 proteasome subunit beta 11 JBrowse link 15 33,267,413 33,273,587 RGD:13792537
G Psmb2 proteasome 20S subunit beta 2 JBrowse link 5 144,702,004 144,734,220 RGD:13792537
G Psmb3 proteasome 20S subunit beta 3 JBrowse link 10 85,646,646 85,653,729 RGD:13792537
G Psmb4 proteasome 20S subunit beta 4 JBrowse link 2 196,043,546 196,046,320 RGD:13792537
G Psmb5 proteasome 20S subunit beta 5 JBrowse link 15 33,259,039 33,263,634 RGD:13792537
G Psmb6 proteasome 20S subunit beta 6 JBrowse link 10 57,131,339 57,133,685 RGD:13792537
G Psmb7 proteasome 20S subunit beta 7 JBrowse link 3 22,890,072 22,951,718 RGD:13792537
G Psmb8 proteasome 20S subunit beta 8 JBrowse link 20 3,990,809 3,993,772 RGD:13792537
G Psmb9 proteasome 20S subunit beta 9 JBrowse link 20 3,973,424 3,978,845 RGD:13792537
G Psme4 proteasome activator subunit 4 JBrowse link 14 115,166,165 115,269,041 RGD:1624291
RGD:13792537
proteasome-mediated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07012426.1 RGD:13792537
G AABR07041109.1 RGD:13792537
G AABR07045621.1 RGD:13792537
G AABR07053749.1 RGD:1600115
G Agap3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 JBrowse link 4 7,202,330 7,253,386 RGD:1624291
RGD:13792537
G Ap1s1 adaptor related protein complex 1 subunit sigma 1 JBrowse link 12 22,665,128 22,676,079 RGD:1600115
RGD:13792537
G Arel1 apoptosis resistant E3 ubiquitin protein ligase 1 JBrowse link 6 108,630,790 108,796,096 RGD:13792537
G Armc8 armadillo repeat containing 8 JBrowse link 8 107,723,359 107,819,208 RGD:13792537
G Arntl aryl hydrocarbon receptor nuclear translocator-like JBrowse link 1 178,039,002 178,137,469 RGD:1600115
RGD:1624291
G Arrb1 arrestin, beta 1 JBrowse link 1 164,502,099 164,573,947 RGD:1624291
RGD:1600115
G Arrb2 arrestin, beta 2 JBrowse link 10 57,040,252 57,048,045 RGD:1624291
RGD:1600115
G Atxn3 ataxin 3 JBrowse link 6 125,817,420 125,853,461 RGD:1624291
RGD:1600115
G Bag6 BAG cochaperone 6 JBrowse link 20 5,124,512 5,138,084 RGD:1624291
G Bfar bifunctional apoptosis regulator JBrowse link 10
10
1,464,658
1,464,783
1,471,152
1,497,653
RGD:1624291
RGD:13792537
G Birc2 baculoviral IAP repeat-containing 2 JBrowse link 8 6,014,014 6,036,668 RGD:1624291
RGD:1600115
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase JBrowse link 1 265,100,094 265,270,263 RGD:1624291
G Cd2ap CD2-associated protein JBrowse link 9 20,794,680 20,858,438 RGD:1302417
G Cdc34 cell division cycle 34 JBrowse link 7 12,899,957 12,905,339 RGD:1624291
RGD:1600115
G Clock clock circadian regulator JBrowse link 14 34,418,226 34,502,218 RGD:1600115
RGD:1624291
G Cop1 COP1, E3 ubiquitin ligase JBrowse link 13 76,942,883 77,076,015 RGD:1624291
RGD:1600115
G Crbn cereblon JBrowse link 4 138,864,910 138,885,786 RGD:1624291
RGD:1600115
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:1600115
RGD:1624291
G Cul1 cullin 1 JBrowse link 4 77,211,814 77,283,369 RGD:13792537
G Cul2 cullin 2 JBrowse link 17 56,952,480 56,992,716 RGD:13792537
G Cul3 cullin 3 JBrowse link 9 86,044,485 86,129,066 RGD:1624291
RGD:1600115
G Cul4a cullin 4A JBrowse link 16 81,718,784 81,756,653 RGD:1624291
RGD:13792537
G Cul4b cullin 4B JBrowse link X 124,831,391 124,870,329 RGD:13792537
G Cul5 cullin 5 JBrowse link 8 58,199,992 58,255,149 RGD:13792537
G Dcaf11 DDB1 and CUL4 associated factor 11 JBrowse link 15 34,233,840 34,244,512 RGD:13792537
G Ddb1 damage-specific DNA binding protein 1 JBrowse link 1 226,657,561 226,683,356 RGD:1600115
RGD:13792537
RGD:1624291
G Ddit3 DNA-damage inducible transcript 3 JBrowse link 7 70,578,564 70,585,074 RGD:1600115
RGD:1624291
G Derl1 derlin 1 JBrowse link 7 97,737,176 97,759,852 RGD:1624291
G Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 JBrowse link 9 82,436,453 82,444,669 RGD:1624291
G Edem3 ER degradation enhancing alpha-mannosidase like protein 3 JBrowse link 13 69,135,095 69,197,708 RGD:1624291
G Epm2a EPM2A glucan phosphatase, laforin JBrowse link 1 5,448,958 5,571,512 RGD:1624291
RGD:1600115
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit JBrowse link 2 39,434,617 39,473,392 RGD:1624291
RGD:13792537
G Faf2 Fas associated factor family member 2 JBrowse link 17 10,485,650 10,527,886 RGD:1624291
G Fbxl17 F-box and leucine-rich repeat protein 17 JBrowse link 9 110,515,558 110,936,631 RGD:1624291
G Fbxl19 F-box and leucine-rich repeat protein 19 JBrowse link 1 199,196,126 199,217,147 RGD:1624291
RGD:1600115
G Fbxl22 F-box and leucine-rich repeat protein 22 JBrowse link 8 72,198,043 72,204,730 RGD:1624291
G Fbxl3 F-box and leucine-rich repeat protein 3 JBrowse link 15 93,647,307 93,667,395 RGD:1624291
G Fbxo45 F-box protein 45 JBrowse link 11 71,795,977 71,811,858 RGD:1624291
RGD:13792537
G Fbxw11 F-box and WD repeat domain containing 11 JBrowse link 10 17,542,374 17,640,718 RGD:1624291
RGD:13792537
G Fbxw5 F-box and WD repeat domain containing 5 JBrowse link 3 2,726,705 2,731,213 RGD:1624291
RGD:1600115
G Fbxw7 F-box and WD repeat domain containing 7 JBrowse link 2 184,230,191 184,309,805 RGD:1624291
RGD:13792537
G Gid4 GID complex subunit 4 JBrowse link 10 46,784,124 46,810,517 RGD:13792537
G Gsk3a glycogen synthase kinase 3 alpha JBrowse link 1 82,097,244 82,108,238 RGD:1624291
RGD:1600115
G Hace1 HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1 JBrowse link 20 50,652,489 50,783,937 RGD:13792537
G Hectd3 HECT domain E3 ubiquitin protein ligase 3 JBrowse link 5 135,860,578 135,870,535 RGD:1624291
RGD:1600115
G Hecw1 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 JBrowse link 17 53,229,997 53,777,474 RGD:13792537
G Hecw2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 JBrowse link 9 60,451,476 60,843,160 RGD:13792537
G Herc2 HECT and RLD domain containing E3 ubiquitin protein ligase 2 JBrowse link 1 114,453,033 114,653,787 RGD:1624291
RGD:1600115
G Ifi27 interferon, alpha-inducible protein 27 JBrowse link 6 127,327,959 127,334,430 RGD:1624291
G Itch itchy E3 ubiquitin protein ligase JBrowse link 3 150,660,665 150,752,016 RGD:13792537
G Kat5 lysine acetyltransferase 5 JBrowse link 1 220,967,795 220,974,596 RGD:1600115
RGD:1624291
G Kat7 lysine acetyltransferase 7 JBrowse link 10 83,095,067 83,128,342 RGD:1600115
G Kctd10 potassium channel tetramerization domain containing 10 JBrowse link 12 47,992,079 48,010,531 RGD:1600115
RGD:13792537
G Kctd13 potassium channel tetramerization domain containing 13 JBrowse link 1 198,360,627 198,378,935 RGD:1624291
RGD:1600115
G Kctd17 potassium channel tetramerization domain containing 17 JBrowse link 7 119,647,301 119,658,148 RGD:1624291
RGD:13792537
G Kctd2 potassium channel tetramerization domain containing 2 JBrowse link 10 103,972,700 103,984,398 RGD:13792537
G Kctd5 potassium channel tetramerization domain containing 5 JBrowse link 10 13,420,152 13,446,323 RGD:13792537
G Kif14 kinesin family member 14 JBrowse link 13 53,350,073 53,421,992 RGD:1624291
G Klhl20 kelch-like family member 20 JBrowse link 13 78,912,361 78,957,226 RGD:1624291
RGD:13792537
RGD:1600115
G Klhl22 kelch-like family member 22 JBrowse link 11 87,646,489 87,718,808 RGD:1600115
RGD:1624291
G Klhl42 kelch-like family, member 42 JBrowse link 4 181,481,147 181,502,916 RGD:1624291
RGD:1600115
G LOC100360846 proteasome subunit beta type 6-like JBrowse link 2 96,031,967 96,033,538 RGD:13792537
G LOC100911548 SPRY domain-containing SOCS box protein 2-like JBrowse link 9 20,217,278 20,219,677 RGD:13792537
G LOC100911679 TD and POZ domain-containing protein 2-like JBrowse link 2 194,084,048 194,085,124 RGD:13792537
G LOC103689927 protein RMD5 homolog B JBrowse link 10 37,073,588 37,084,671 RGD:13792537
G LOC103694506 ubiquitin-conjugating enzyme E2 W JBrowse link X 119,160,964 119,178,031 RGD:1600115
RGD:13792537
G LOC689173 similar to TD and POZ domain containing 2 JBrowse link 9 117,438,467 117,447,457 RGD:13792537
G Ltn1 listerin E3 ubiquitin protein ligase 1 JBrowse link 11 27,023,328 27,080,575 RGD:13792537
G Maea macrophage erythroblast attacher JBrowse link 14 82,664,248 82,697,673 RGD:13792537
G Marchf6 membrane associated ring-CH-type finger 6 JBrowse link 2 84,533,546 84,608,743 RGD:1624291
G Mta1 metastasis associated 1 JBrowse link 6 137,911,302 137,950,066 RGD:1600115
RGD:1624291
G Nedd4 NEDD4 E3 ubiquitin protein ligase JBrowse link 8 79,323,408 79,408,842 RGD:13792537
G Nedd4l NEDD4 like E3 ubiquitin protein ligase JBrowse link 18 60,392,376 60,719,720 RGD:1624291
RGD:13792537
G Nfe2l2 nuclear factor, erythroid 2-like 2 JBrowse link 3 62,497,568 62,525,146 RGD:1624291
RGD:1600115
G Nhlrc1 NHL repeat containing E3 ubiquitin protein ligase 1 JBrowse link 17 18,059,382 18,060,572 RGD:1624291
RGD:13792537
RGD:1600115
G Nhlrc3 NHL repeat containing 3 JBrowse link 2 142,672,188 142,686,593 RGD:13792537
G Nploc4 NPL4 homolog, ubiquitin recognition factor JBrowse link 10 109,553,518 109,610,087 RGD:1600115
G Nsfl1c NSFL1 cofactor JBrowse link 3 146,980,923 147,005,478 RGD:13792537
G Otud5 OTU deubiquitinase 5 JBrowse link X 15,471,212 15,504,372 RGD:1624291
G Pcbp2 poly(rC) binding protein 2 JBrowse link 7 144,077,901 144,103,723 RGD:1624291
RGD:1600115
G Pcnp PEST proteolytic signal containing nuclear protein JBrowse link 11 47,055,641 47,070,319 RGD:1624291
RGD:1600115
G Peli1 pellino E3 ubiquitin protein ligase 1 JBrowse link 14 106,008,086 106,062,566 RGD:1600115
RGD:1624291
G Plaa phospholipase A2, activating protein JBrowse link 5 113,548,913 113,578,928 RGD:13792537
G Pml promyelocytic leukemia JBrowse link 8 63,002,515 63,034,310 RGD:1624291
RGD:1600115
G Pmp22 peripheral myelin protein 22 JBrowse link 10 49,538,588 49,568,583 RGD:1624291
G Ppp2cb protein phosphatase 2 catalytic subunit beta JBrowse link 16 62,273,276 62,294,767 RGD:1624291
RGD:1600115
G Ppp2r5c protein phosphatase 2, regulatory subunit B', gamma JBrowse link 6 134,804,128 134,941,912 RGD:1624291
RGD:1600115
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:1600115
RGD:1624291
G Psma1 proteasome 20S subunit alpha 1 JBrowse link 1 183,733,567 183,744,586 RGD:13792537
G Psma2 proteasome 20S subunit alpha 2 JBrowse link 17 53,091,937 53,102,324 RGD:13792537
G Psma3 proteasome 20S subunit alpha 3 JBrowse link 6 93,423,029 93,444,223 RGD:13792537
G Psma3l proteasome subunit alpha type 3-like RGD:13792537
G Psma4 proteasome 20S subunit alpha 4 JBrowse link 8 59,532,456 59,539,916 RGD:13792537
G Psma5 proteasome 20S subunit alpha 5 JBrowse link 2 211,050,344 211,073,706 RGD:1600115
RGD:13792537
G Psma6 proteasome 20S subunit alpha 6 JBrowse link 6 76,174,460 76,205,429 RGD:13792537
G Psma7 proteasome 20S subunit alpha 7 JBrowse link 3 175,420,042 175,426,384 RGD:13792537
G Psma8 proteasome 20S subunit alpha 8 JBrowse link 18 6,114,757 6,182,393 RGD:13792537
G Psmb1 proteasome 20S subunit beta 1 JBrowse link 1 57,470,878 57,491,359 RGD:13792537
G Psmb10 proteasome 20S subunit beta 10 JBrowse link 19 37,909,543 37,912,027 RGD:13792537
G Psmb11 proteasome subunit beta 11 JBrowse link 15 33,267,413 33,273,587 RGD:13792537
G Psmb2 proteasome 20S subunit beta 2 JBrowse link 5 144,702,004 144,734,220 RGD:13792537
G Psmb3 proteasome 20S subunit beta 3 JBrowse link 10 85,646,646 85,653,729 RGD:13792537
G Psmb4 proteasome 20S subunit beta 4 JBrowse link 2 196,043,546 196,046,320 RGD:13792537
G Psmb5 proteasome 20S subunit beta 5 JBrowse link 15 33,259,039 33,263,634 RGD:1624291
RGD:13792537
RGD:1600115
G Psmb6 proteasome 20S subunit beta 6 JBrowse link 10 57,131,339 57,133,685 RGD:13792537
G Psmb7 proteasome 20S subunit beta 7 JBrowse link 3 22,890,072 22,951,718 RGD:13792537
G Psmb8 proteasome 20S subunit beta 8 JBrowse link 20 3,990,809 3,993,772 RGD:13792537
G Psmb9 proteasome 20S subunit beta 9 JBrowse link 20 3,973,424 3,978,845 RGD:13792537
G Psmc5 proteasome 26S subunit, ATPase 5 JBrowse link 10 94,445,877 94,451,811 RGD:1624291
RGD:1600115
G Psmd1 proteasome 26S subunit, non-ATPase 1 JBrowse link 9 93,080,618 93,155,033 RGD:13792537
G Psmd12 proteasome 26S subunit, non-ATPase 12 JBrowse link 10 95,706,808 95,725,452 RGD:8693626
RGD:13792537
G Psmd14 proteasome 26S subunit, non-ATPase 14 JBrowse link 3 47,578,449 47,673,330 RGD:13792537
G Psmd2 proteasome 26S subunit, non-ATPase 2 JBrowse link 11 83,934,098 83,944,725 RGD:13792537
G Psmd4 proteasome 26S subunit, non-ATPase 4 JBrowse link 2 196,198,303 196,207,569 RGD:13792537
G Psmd6 proteasome 26S subunit, non-ATPase 6 JBrowse link 15 12,407,557 12,416,153 RGD:13792537
G Psmd7 proteasome 26S subunit, non-ATPase 7 JBrowse link 19 39,639,432 39,646,718 RGD:13792537
G Psmd8 proteasome 26S subunit, non-ATPase 8 JBrowse link 1 88,116,811 88,123,643 RGD:13792537
G Rad23a RAD23 homolog A, nucleotide excision repair protein JBrowse link 19 25,949,488 25,956,677 RGD:13792537
G Rad23b RAD23 homolog B, nucleotide excision repair protein JBrowse link 5 72,103,704 72,141,701 RGD:13792537
G Rbck1 RANBP2-type and C3HC4-type zinc finger containing 1 JBrowse link 3 147,793,014 147,809,941 RGD:1600115
RGD:13792537
RGD:1624291
G Rbx1 ring-box 1 JBrowse link 7 122,700,849 122,710,907 RGD:1624291
G Rffl ring finger and FYVE-like domain containing E3 ubiquitin protein ligase JBrowse link 10 70,157,621 70,220,618 RGD:1600115
RGD:1624291
G RGD1559714 similar to TDPOZ3 JBrowse link 2 195,277,647 195,279,177 RGD:13792537
G RGD1560510 similar to TDPOZ2 JBrowse link 2 194,508,831 194,511,446 RGD:13792537
G RGD1560554 similar to TDPOZ2 JBrowse link 2 195,485,668 195,553,986 RGD:13792537
G RGD1563667 similar to TDPOZ3 JBrowse link 2
9
195,152,284
117,465,991
195,554,013
117,467,757
RGD:13792537
G RGD1566337 similar to TDPOZ2 JBrowse link 2 194,874,803 194,879,455 RGD:13792537
G Rmnd5a required for meiotic nuclear division 5 homolog A JBrowse link 4 99,249,159 99,305,805 RGD:13792537
G Rmnd5b required for meiotic nuclear division 5 homolog B JBrowse link 10 34,979,902 34,990,985 RGD:13792537
G Rnf122 ring finger protein 122 JBrowse link 16 64,766,878 64,787,308 RGD:1624291
G Rnf126 ring finger protein 126 JBrowse link 7 12,820,796 12,828,325 RGD:1624291
G Rnf186 ring finger protein 186 JBrowse link 5 157,416,897 157,418,121 RGD:1624291
RGD:13792537
G Rnf187 ring finger protein 187 JBrowse link 10 45,273,400 45,279,299 RGD:1624291
RGD:1600115
G Rnf216 ring finger protein 216 JBrowse link 12 13,508,429 13,631,689 RGD:1624291
RGD:1600115
G Rnf34 ring finger protein 34 JBrowse link 12 39,164,290 39,185,209 RGD:1624291
RGD:1600115
G Rnf4 ring finger protein 4 JBrowse link 14 81,658,400 81,679,756 RGD:1600115
RGD:1624291
G Siah1 siah E3 ubiquitin protein ligase 1 JBrowse link 19 21,372,163 21,395,773 RGD:1624291
RGD:13792537
RGD:1600115
G Siah2 siah E3 ubiquitin protein ligase 2 JBrowse link 2 148,874,151 148,891,900 RGD:13792537
G Siah3 siah E3 ubiquitin protein ligase family member 3 JBrowse link 15 57,505,449 57,568,743 RGD:13792537
G Sirt1 sirtuin 1 JBrowse link 20 26,831,971 26,851,587 RGD:1624291
G Sirt2 sirtuin 2 JBrowse link 1 86,948,866 86,971,954 RGD:1600115
RGD:1624291
G Skp2 S-phase kinase associated protein 2 JBrowse link 2 58,506,146 58,534,211 RGD:1624291
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 JBrowse link 12 11,433,815 11,526,465 RGD:1624291
RGD:13792537
G Smurf2 SMAD specific E3 ubiquitin protein ligase 2 JBrowse link 10 95,018,050 95,118,107 RGD:13792537
G Spop speckle type BTB/POZ protein JBrowse link 10 83,231,187 83,311,987 RGD:1624291
RGD:13792537
G Spopl speckle type BTB/POZ protein like JBrowse link 3 397,834 471,651 RGD:1624291
RGD:13792537
G Spsb1 splA/ryanodine receptor domain and SOCS box containing 1 JBrowse link 5 166,913,734 166,978,534 RGD:13792537
G Spsb2 splA/ryanodine receptor domain and SOCS box containing 2 JBrowse link 4 157,325,980 157,328,380 RGD:13792537
G Spsb3 splA/ryanodine receptor domain and SOCS box containing 3 JBrowse link 10 14,248,199 14,253,815 RGD:13792537
G Spsb4 splA/ryanodine receptor domain and SOCS box containing 4 JBrowse link 8 104,840,939 104,912,959 RGD:13792537
G Stub1 STIP1 homology and U-box containing protein 1 JBrowse link 10 15,197,754 15,200,035 RGD:1624291
G Tbl1x transducin (beta)-like 1 X-linked JBrowse link X 44,959,883 44,988,551 RGD:1624291
RGD:1600115
G Tbl1xr1 TBL1X receptor 1 JBrowse link 2 107,221,913 107,359,229 RGD:1624291
RGD:1600115
G Tbx21 T-box transcription factor 21 JBrowse link 10 85,032,799 85,049,331 RGD:1624291
RGD:1600115
G Tnfaip1 TNF alpha induced protein 1 JBrowse link 10 65,791,002 65,805,693 RGD:1624291
RGD:13792537
RGD:1600115
G Topors TOP1 binding arginine/serine rich protein JBrowse link 5 56,554,956 56,566,503 RGD:1624291
RGD:1600115
G Trim13 tripartite motif-containing 13 JBrowse link 15 41,897,191 41,936,545 RGD:1624291
G Trim2 tripartite motif-containing 2 JBrowse link 2 183,145,096 183,223,819 RGD:13792537
G Trim3 tripartite motif-containing 3 JBrowse link 1 170,441,662 170,464,341 RGD:13792537
G Trim38 tripartite motif containing 38 JBrowse link 17 43,600,006 43,607,879 RGD:1624291
G Trim63 tripartite motif containing 63 JBrowse link 5 152,533,362 152,547,138 RGD:1624291
G Trim71 tripartite motif containing 71 JBrowse link 8 122,553,015 122,604,787 RGD:13792537
G Trim72 tripartite motif containing 72 JBrowse link 1 199,450,042 199,457,902 RGD:1624291
RGD:1600115
G Trim9 tripartite motif-containing 9 JBrowse link 6 92,660,026 92,760,036 RGD:1624291
RGD:1600115
G Ube2a ubiquitin-conjugating enzyme E2A JBrowse link X 123,486,988 123,497,726 RGD:13792537
G Ube2b ubiquitin-conjugating enzyme E2B JBrowse link 10 37,439,947 37,454,867 RGD:1624291
RGD:13792537
G Ube2d3 ubiquitin-conjugating enzyme E2D 3 JBrowse link 2 240,626,198 240,655,874 RGD:1624291
RGD:1600115
G Ube2g1 ubiquitin-conjugating enzyme E2G 1 JBrowse link 10 59,173,268 59,254,458 RGD:13792537
G Ube2h ubiquitin-conjugating enzyme E2H JBrowse link 4 57,511,418 57,625,147 RGD:1624291
RGD:1600115
G Ube2i ubiquitin-conjugating enzyme E2I JBrowse link 10 14,618,615 14,639,274 RGD:730030
G Ube2k ubiquitin-conjugating enzyme E2K JBrowse link 14 44,289,247 44,348,691 RGD:13792537
G Ube2u ubiquitin conjugating enzyme E2 U JBrowse link 5 118,574,647 118,642,810 RGD:13792537
G Ube2w ubiquitin-conjugating enzyme E2W JBrowse link 5 29,798,845 29,812,777 RGD:1624291
RGD:13792537
RGD:1600115
G Ube3d ubiquitin protein ligase E3D JBrowse link 8 93,948,689 94,120,477 RGD:13792537
G Ube4b ubiquitination factor E4B JBrowse link 5 166,156,033 166,259,069 RGD:1624291
G Ubxn11 UBX domain protein 11 JBrowse link 5 152,332,993 152,356,647 RGD:13792537
G Ubxn2a UBX domain protein 2A JBrowse link 6 28,969,471 28,997,987 RGD:13792537
G Ubxn2b UBX domain protein 2B JBrowse link 5 19,285,368 19,314,199 RGD:13792537
G Ufd1 ubiquitin recognition factor in ER associated degradation 1 JBrowse link 11 86,304,836 86,328,478 RGD:1600115
G Usp44 ubiquitin specific peptidase 44 JBrowse link 7 34,714,293 34,759,352 RGD:1624291
RGD:1600115
G Vcp valosin-containing protein JBrowse link 5 58,426,548 58,445,953 RGD:1624291
RGD:1600115
G Wwp1 WW domain containing E3 ubiquitin protein ligase 1 JBrowse link 5 33,608,489 33,696,487 RGD:1624291
RGD:13792537
G Wwp2 WW domain containing E3 ubiquitin protein ligase 2 JBrowse link 19 39,543,246 39,614,624 RGD:1624291
RGD:13792537
G Zfand2b zinc finger AN1-type containing 2B JBrowse link 9 82,370,887 82,373,843 RGD:1600115
RGD:1624291
G Znrf1 zinc and ring finger 1 JBrowse link 19 43,750,205 43,834,962 RGD:1624291
RGD:1600115
protein localization to cytosolic proteasome complex involved in ERAD pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atxn3 ataxin 3 JBrowse link 6 125,817,420 125,853,461 RGD:1624291
regulation of ER-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 JBrowse link 19 11,046,905 11,057,440 RGD:1624291
RGD:13792537
regulation of ERAD pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Usp19 ubiquitin specific peptidase 19 JBrowse link 8 117,280,690 117,291,729 RGD:1624291
RGD:1600115
regulation of proteasomal protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:1600115
RGD:1624291
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase JBrowse link 1 265,100,094 265,270,263 RGD:1624291
RGD:1600115
G Dlgap1 DLG associated protein 1 JBrowse link 9 118,277,046 119,159,807 RGD:8553458
G Dnaaf4 dynein axonemal assembly factor 4 JBrowse link 8 79,637,678 79,651,892 RGD:1624291
RGD:1600115
G Epm2a EPM2A glucan phosphatase, laforin JBrowse link 1 5,448,958 5,571,512 RGD:1624291
RGD:1600115
G Gpx1 glutathione peroxidase 1 JBrowse link 8 117,117,430 117,118,528 RGD:1624291
RGD:1600115
G Nfe2l1 nuclear factor, erythroid 2-like 1 JBrowse link 10 84,686,762 84,699,313 RGD:1600115
RGD:1624291
G Nudt15 nudix hydrolase 15 JBrowse link 15 55,417,774 55,456,698 RGD:1624291
RGD:1600115
G Pkd1 polycystin 1, transient receptor potential channel interacting JBrowse link 10 13,914,057 13,962,008 RGD:1624291
RGD:1600115
G Prkaca protein kinase cAMP-activated catalytic subunit alpha JBrowse link 19 25,095,089 25,118,869 RGD:1624291
RGD:1600115
G Psmd14 proteasome 26S subunit, non-ATPase 14 JBrowse link 3 47,578,449 47,673,330 RGD:1624291
RGD:1600115
G Psme1 proteasome activator subunit 1 JBrowse link 15 34,256,071 34,258,947 RGD:13792537
G Psme2 proteasome activator subunit 2 JBrowse link 15 34,265,552 34,269,851 RGD:13792537
G Psme3 proteasome activator subunit 3 JBrowse link 10 89,236,256 89,244,041 RGD:1624291
RGD:1600115
G Rhbdf1 rhomboid 5 homolog 1 JBrowse link 10 15,672,370 15,685,285 RGD:1624291
RGD:1600115
G Tmf1 TATA element modulatory factor 1 JBrowse link 4 129,521,986 129,546,024 RGD:1624291
RGD:1600115
G Ubb ubiquitin B JBrowse link 10 48,880,231 48,881,896 RGD:1624291
G Uchl5 ubiquitin C-terminal hydrolase L5 JBrowse link 13 60,568,102 60,603,812 RGD:1624291
G Usp14 ubiquitin specific peptidase 14 JBrowse link 18 1,178,785 1,216,573 RGD:1624291
regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Araf A-Raf proto-oncogene, serine/threonine kinase JBrowse link X 1,369,534 1,391,603 RGD:1624291
RGD:1600115
G Commd1 copper metabolism domain containing 1 JBrowse link 14 107,664,321 107,759,974 RGD:1624291
RGD:13792537
G Foxf2 forkhead box F2 JBrowse link 17 34,150,417 34,156,450 RGD:1624291
G Glmn glomulin, FKBP associated protein JBrowse link 14 3,204,390 3,247,703 RGD:1624291
RGD:1600115
G Gna12 G protein subunit alpha 12 JBrowse link 12 15,890,202 15,971,212 RGD:1624291
RGD:1600115
G Rad23a RAD23 homolog A, nucleotide excision repair protein JBrowse link 19 25,949,488 25,956,677 RGD:1624291
G Rad23b RAD23 homolog B, nucleotide excision repair protein JBrowse link 5 72,103,704 72,141,701 RGD:1624291
RGD:1600115
G Ube2k ubiquitin-conjugating enzyme E2K JBrowse link 14 44,289,247 44,348,691 RGD:1600115
RGD:1624291
G Ubqln4 ubiquilin 4 JBrowse link 2 187,915,701 187,931,035 RGD:1600115
RGD:1624291
G Ufl1 Ufm1-specific ligase 1 JBrowse link 5 39,616,479 39,650,894 RGD:1624291
RGD:13792537
G Wnt10b Wnt family member 10B JBrowse link 7 140,448,284 140,466,159 RGD:1624291
RGD:1600115
retrograde protein transport, ER to cytosol term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aup1 AUP1, lipid droplet regulating VLDL assembly factor JBrowse link 4 113,887,030 113,890,103 RGD:1624291
RGD:1600115
G Derl1 derlin 1 JBrowse link 7 97,737,176 97,759,852 RGD:1624291
RGD:1600115
G Derl2 derlin 2 JBrowse link 10 57,641,682 57,653,554 RGD:1624291
RGD:1600115
G Erlec1 endoplasmic reticulum lectin 1 JBrowse link 14 115,314,890 115,352,871 RGD:13792537
G Faf2 Fas associated factor family member 2 JBrowse link 17 10,485,650 10,527,886 RGD:1624291
RGD:1600115
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 JBrowse link 19 11,046,905 11,057,440 RGD:1624291
RGD:1600115
G Hsp90b1 heat shock protein 90 beta family member 1 JBrowse link 7 27,226,570 27,240,533 RGD:1624291
RGD:1600115
G Nploc4 NPL4 homolog, ubiquitin recognition factor JBrowse link 10 109,553,518 109,610,087 RGD:1624291
RGD:1600115
G Os9 OS9, endoplasmic reticulum lectin JBrowse link 7 70,378,625 70,407,135 RGD:13792537
G Sec61b Sec61 translocon beta subunit JBrowse link 5 63,192,322 63,200,532 RGD:1624291
RGD:1600115
G Sel1l SEL1L adaptor subunit of ERAD E3 ubiquitin ligase JBrowse link 6 115,572,683 115,616,904 RGD:1624291
RGD:1600115
G Selenos selenoprotein S JBrowse link 1 126,979,579 126,989,344 RGD:1600115
RGD:13792537
RGD:1624291
G Syvn1 synoviolin 1 JBrowse link 1 221,409,281 221,416,229 RGD:1624291
RGD:13792537
G Tmem129 transmembrane protein 129 JBrowse link 14 82,350,734 82,356,084 RGD:1624291
RGD:1600115
G Ufd1 ubiquitin recognition factor in ER associated degradation 1 JBrowse link 11 86,304,836 86,328,478 RGD:1624291
RGD:1600115
G Vcp valosin-containing protein JBrowse link 5 58,426,548 58,445,953 RGD:1624291
RGD:13792537
ribosome-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07064719.2 RGD:13792537
G Ltn1 listerin E3 ubiquitin protein ligase 1 JBrowse link 11 27,023,328 27,080,575 RGD:13792537
SCF-dependent proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07002848.1 RGD:13792537
G Amn1 antagonist of mitotic exit network 1 homolog JBrowse link 4 183,670,589 183,697,531 RGD:13792537
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase JBrowse link 1 265,100,094 265,270,263 RGD:1624291
RGD:1600115
G Ccnf cyclin F JBrowse link 10 13,594,687 13,619,935 RGD:1624291
RGD:1600115
G Cul1 cullin 1 JBrowse link 4 77,211,814 77,283,369 RGD:1624291
RGD:13792537
G Cul2 cullin 2 JBrowse link 17 56,952,480 56,992,716 RGD:13792537
G Cul4a cullin 4A JBrowse link 16 81,718,784 81,756,653 RGD:13792537
G Cul4b cullin 4B JBrowse link X 124,831,391 124,870,329 RGD:13792537
G Cul5 cullin 5 JBrowse link 8 58,199,992 58,255,149 RGD:13792537
G Dmac2 distal membrane arm assembly complex 2 JBrowse link 1 82,413,171 82,419,157 RGD:13792537
G Fbxl12 F-box and leucine-rich repeat protein 12 JBrowse link 8 21,656,636 21,662,755 RGD:13792537
G Fbxl13 F-box and leucine-rich repeat protein 13 JBrowse link 4 10,020,349 10,170,012 RGD:13792537
G Fbxl15 F-box and leucine-rich repeat protein 15 JBrowse link 1 266,075,782 266,078,023 RGD:1624291
RGD:13792537
RGD:1600115
G Fbxl16 F-box and leucine-rich repeat protein 16 JBrowse link 10 15,176,489 15,188,729 RGD:13792537
G Fbxl17 F-box and leucine-rich repeat protein 17 JBrowse link 9 110,515,558 110,936,631 RGD:1624291
G Fbxl18 F-box and leucine-rich repeat protein 18 JBrowse link 12 13,728,155 13,751,781 RGD:13792537
G Fbxl2 F-box and leucine-rich repeat protein 2 JBrowse link 8 122,240,393 122,290,439 RGD:1624291
RGD:13792537
G Fbxl20 F-box and leucine-rich repeat protein 20 JBrowse link 10 86,036,745 86,099,699 RGD:13792537
G Fbxl21 F-box and leucine-rich repeat protein 21 JBrowse link 17 8,505,771 8,520,208 RGD:13792537
G Fbxl22 F-box and leucine-rich repeat protein 22 JBrowse link 8 72,198,043 72,204,730 RGD:13792537
G Fbxl3 F-box and leucine-rich repeat protein 3 JBrowse link 15 93,647,307 93,667,395 RGD:1624291
RGD:13792537
G Fbxl4 F-box and leucine-rich repeat protein 4 JBrowse link 5 36,555,061 36,628,920 RGD:13792537
G Fbxl5 F-box and leucine-rich repeat protein 5 JBrowse link 14 71,852,649 71,891,143 RGD:1624291
RGD:13792537
G Fbxl6 F-box and leucine-rich repeat protein 6 JBrowse link 7 117,602,056 117,604,954 RGD:13792537
G Fbxl7 F-box and leucine-rich repeat protein 7 JBrowse link 2 79,067,907 79,439,987 RGD:1624291
RGD:13792537
G Fbxl8 F-box and leucine-rich repeat protein 8 JBrowse link 19 37,216,696 37,225,701 RGD:13792537
G Fbxo17 F-box protein 17 JBrowse link 1 86,903,762 86,919,238 RGD:13792537
G Fbxo2 F-box protein 2 JBrowse link 5 164,972,483 164,977,912 RGD:1624291
RGD:13792537
G Fbxo31 F-box protein 31 JBrowse link 19 53,487,610 53,625,673 RGD:1600115
RGD:13792537
RGD:1624291
G Fbxo33 F-box protein 33 JBrowse link 6 80,302,291 80,334,536 RGD:1600115
G Fbxo38 F-box protein 38 JBrowse link 18 57,827,391 57,874,515 RGD:1600115
RGD:1624291
G Fbxo39 F-box protein 39 JBrowse link 10 58,874,028 58,878,445 RGD:13792537
G Fbxo4 F-box protein 4 JBrowse link 2 53,797,954 53,811,134 RGD:1624291
RGD:1600115
G Fbxo44 F-box protein 44 JBrowse link 5 164,962,921 164,972,273 RGD:13792537
G Fbxo48 F-box protein 48 JBrowse link 14 100,129,835 100,140,400 RGD:13792537
G Fbxo6 F-box protein 6 JBrowse link 5 164,956,285 164,962,075 RGD:1624291
RGD:13792537
RGD:1600115
G Fbxo9 f-box protein 9 JBrowse link 8 85,388,331 85,413,896 RGD:1624291
RGD:13792537
RGD:1600115
G Fbxw11 F-box and WD repeat domain containing 11 JBrowse link 10 17,542,374 17,640,718 RGD:1624291
RGD:13792537
G Fbxw4 F-box and WD repeat domain containing 4 JBrowse link 1 265,318,526 265,420,503 RGD:13792537
G Fbxw5 F-box and WD repeat domain containing 5 JBrowse link 3 2,726,705 2,731,213 RGD:1624291
RGD:1600115
G Fbxw7 F-box and WD repeat domain containing 7 JBrowse link 2 184,230,191 184,309,805 RGD:1624291
RGD:13464262
G Kif14 kinesin family member 14 JBrowse link 13 53,350,073 53,421,992 RGD:1624291
RGD:1600115
G Lrrc29 leucine rich repeat containing 29 JBrowse link 19 37,266,782 37,282,076 RGD:13792537
G Nccrp1 NCCRP1, F-box associated domain containing JBrowse link 1
1
85,558,420
85,213,578
85,559,652
85,218,030
RGD:13792537
G Rbx1 ring-box 1 JBrowse link 7 122,700,849 122,710,907 RGD:1624291
RGD:13792537
G Rnf7 ring finger protein 7 JBrowse link 8 104,326,719 104,336,098 RGD:13792537
G Skp1 S-phase kinase-associated protein 1 JBrowse link 10 37,594,578 37,609,498 RGD:1600115
RGD:13792537
RGD:1624291
G Skp2 S-phase kinase associated protein 2 JBrowse link 2 58,506,146 58,534,211 RGD:13792537
G Wwtr1 WW domain containing transcription regulator 1 JBrowse link 2 147,577,149 147,693,033 RGD:1624291
RGD:1600115
transcription factor catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Taf1 TATA-box binding protein associated factor 1 JBrowse link X 71,412,291 71,486,456 RGD:1624291
ubiquitin-dependent ERAD pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07002848.1 RGD:13792537
G Amfr autocrine motility factor receptor JBrowse link 19 11,473,538 11,509,500 RGD:1624291
RGD:1600115
G Ankzf1 ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1 JBrowse link 9 82,393,619 82,400,537 RGD:13792537
G Aup1 AUP1, lipid droplet regulating VLDL assembly factor JBrowse link 4 113,887,030 113,890,103 RGD:13792537
G Bag6 BAG cochaperone 6 JBrowse link 20 5,124,512 5,138,084 RGD:1600115
RGD:13792537
RGD:1624291
G Ccdc47 coiled-coil domain containing 47 JBrowse link 10 94,388,425 94,406,949 RGD:1624291
RGD:1600115
G Derl1 derlin 1 JBrowse link 7 97,737,176 97,759,852 RGD:1624291
RGD:13792537
G Derl2 derlin 2 JBrowse link 10 57,641,682 57,653,554 RGD:1624291
RGD:13792537
G Derl3 derlin 3 JBrowse link 20 13,692,102 13,707,645 RGD:1624291
RGD:13792537
G Dnajb12 DnaJ heat shock protein family (Hsp40) member B12 JBrowse link 20 29,445,510 29,463,739 RGD:13792537
G Dnajb14 DnaJ heat shock protein family (Hsp40) member B14 JBrowse link 2 243,108,443 243,151,933 RGD:13792537
G Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 JBrowse link 9 82,436,453 82,444,669 RGD:1624291
RGD:13792537
G Dnajb9 DnaJ heat shock protein family (Hsp40) member B9 JBrowse link 6 64,165,913 64,170,122 RGD:1624291
RGD:1600115
G Dnajc10 DnaJ heat shock protein family (Hsp40) member C10 JBrowse link 3 67,538,289 67,578,308 RGD:1624291
RGD:1600115
G Dnajc18 DnaJ heat shock protein family (Hsp40) member C18 JBrowse link 18 28,466,892 28,501,013 RGD:13792537
G Ecpas Ecm29 proteasome adaptor and scaffold JBrowse link 5 75,928,510 76,040,771 RGD:1624291
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 JBrowse link 4 140,886,644 140,918,654 RGD:1624291
G Erlec1 endoplasmic reticulum lectin 1 JBrowse link 14 115,314,890 115,352,871 RGD:1624291
RGD:13792537
G Erlin1 ER lipid raft associated 1 JBrowse link 1 263,810,439 263,845,762 RGD:1624291
RGD:1600115
G Erlin2 ER lipid raft associated 2 JBrowse link 16 69,179,005 69,195,452 RGD:1624291
RGD:1600115
G Faf2 Fas associated factor family member 2 JBrowse link 17 10,485,650 10,527,886 RGD:1600115
RGD:1624291
G Fbxo17 F-box protein 17 JBrowse link 1 86,903,762 86,919,238 RGD:13792537
G Fbxo2 F-box protein 2 JBrowse link 5 164,972,483 164,977,912 RGD:1624291
RGD:13792537
G Fbxo44 F-box protein 44 JBrowse link 5 164,962,921 164,972,273 RGD:13792537
G Fbxo6 F-box protein 6 JBrowse link 5 164,956,285 164,962,075 RGD:1624291
RGD:13792537
RGD:1600115
G Foxred2 FAD-dependent oxidoreductase domain containing 2 JBrowse link 7 119,172,189 119,186,670 RGD:1624291
RGD:13792537
G Hsp90b1 heat shock protein 90 beta family member 1 JBrowse link 7 27,226,570 27,240,533 RGD:1600115
RGD:13792537
RGD:1624291
G Hspa5 heat shock protein family A (Hsp70) member 5 JBrowse link 3 13,838,304 13,842,763 RGD:13792537
G Jkamp JNK1/MAPK8-associated membrane protein JBrowse link 6 94,835,845 94,849,784 RGD:1624291
G LOC103694875 derlin-3 RGD:13792537
G Man1b1 mannosidase, alpha, class 1B, member 1 JBrowse link 3 2,547,259 2,569,051 RGD:1624291
RGD:13792537
G Marchf6 membrane associated ring-CH-type finger 6 JBrowse link 2 84,533,546 84,608,743 RGD:13792537
G Nccrp1 NCCRP1, F-box associated domain containing JBrowse link 1
1
85,558,420
85,213,578
85,559,652
85,218,030
RGD:13792537
G Os9 OS9, endoplasmic reticulum lectin JBrowse link 7 70,378,625 70,407,135 RGD:1600115
RGD:13792537
RGD:1624291
G Psmc6 proteasome 26S subunit, ATPase 6 JBrowse link 15 19,667,453 19,688,916 RGD:13792537
G Rnf103 ring finger protein 103 JBrowse link 4 99,398,479 99,415,193 RGD:1600115
RGD:1624291
G Rnf121 ring finger protein 121 JBrowse link 1 167,095,916 167,165,257 RGD:13792537
G Rnf185 ring finger protein 185 JBrowse link 14 83,648,400 83,685,273 RGD:1624291
RGD:1600115
G Rnf5 ring finger protein 5 JBrowse link 20 4,366,244 4,368,690 RGD:1600115
RGD:1624291
G Sec61b Sec61 translocon beta subunit JBrowse link 5 63,192,322 63,200,532 RGD:1624291
RGD:1600115
G Sel1l SEL1L adaptor subunit of ERAD E3 ubiquitin ligase JBrowse link 6 115,572,683 115,616,904 RGD:13792537
G Sel1l2 SEL1L2 adaptor subunit of ERAD E3 ligase JBrowse link 3 134,281,809 134,406,560 RGD:13792537
G Selenos selenoprotein S JBrowse link 1 126,979,579 126,989,344 RGD:1600115
RGD:13792537
RGD:1624291
G Sgta small glutamine rich tetratricopeptide repeat containing alpha JBrowse link 7 11,521,949 11,538,691 RGD:1624291
RGD:13792537
RGD:1600115
G Sgtb small glutamine rich tetratricopeptide repeat containing beta JBrowse link 2 34,185,938 34,222,428 RGD:13792537
G Stt3b STT3 oligosaccharyltransferase complex catalytic subunit B JBrowse link 8 123,303,910 123,370,729 RGD:1624291
RGD:1600115
G Stub1 STIP1 homology and U-box containing protein 1 JBrowse link 10 15,197,754 15,200,035 RGD:1600115
RGD:1624291
G Syvn1 synoviolin 1 JBrowse link 1 221,409,281 221,416,229 RGD:1624291
RGD:13792537
G Tmem129 transmembrane protein 129 JBrowse link 14 82,350,734 82,356,084 RGD:1624291
RGD:1600115
G Tmem67 transmembrane protein 67 JBrowse link 5 25,666,138 25,721,056 RGD:1600115
RGD:1624291
G Tmub1 transmembrane and ubiquitin-like domain containing 1 JBrowse link 4 7,257,752 7,260,318 RGD:1624291
RGD:1600115
G Tmub2 transmembrane and ubiquitin-like domain containing 2 JBrowse link 10 90,230,428 90,234,874 RGD:1600115
G Trim13 tripartite motif-containing 13 JBrowse link 15 41,897,191 41,936,545 RGD:1624291
RGD:1600115
G Trim25 tripartite motif-containing 25 JBrowse link 10 76,343,847 76,362,159 RGD:1600115
RGD:1624291
G Ube2g2 ubiquitin-conjugating enzyme E2G 2 JBrowse link 20 11,700,089 11,721,823 RGD:1624291
RGD:13792537
G Ube2j1 ubiquitin-conjugating enzyme E2, J1 JBrowse link 5 48,274,387 48,292,699 RGD:1624291
RGD:1600115
G Ube2j2 ubiquitin-conjugating enzyme E2, J2 JBrowse link 5 173,372,659 173,387,084 RGD:1624291
RGD:13792537
G Ube4a ubiquitination factor E4A JBrowse link 8 49,229,713 49,271,894 RGD:13792537
G Ube4b ubiquitination factor E4B JBrowse link 5 166,156,033 166,259,069 RGD:13792537
G Ubqln1 ubiquilin 1 JBrowse link 17 6,840,441 6,878,842 RGD:1600115
RGD:13792537
RGD:1624291
G Ubqln2 ubiquilin 2 JBrowse link X 18,723,313 18,726,732 RGD:1624291
RGD:13792537
G Ubxn4 UBX domain protein 4 JBrowse link 13 44,956,963 44,989,653 RGD:1624291
RGD:1600115
G Ubxn8 UBX domain protein 8 JBrowse link 16 62,251,243 62,272,838 RGD:1624291
RGD:1600115
G Ufd1 ubiquitin recognition factor in ER associated degradation 1 JBrowse link 11 86,304,836 86,328,478 RGD:13792537
G Usp19 ubiquitin specific peptidase 19 JBrowse link 8 117,280,690 117,291,729 RGD:1600115
RGD:13792537
RGD:1624291
G Vcp valosin-containing protein JBrowse link 5 58,426,548 58,445,953 RGD:1600115
RGD:13792537
RGD:1624291
G Wfs1 wolframin ER transmembrane glycoprotein JBrowse link 14 78,640,707 78,665,224 RGD:1624291
RGD:1600115
G Yod1 YOD1 deubiquitinase JBrowse link 13 47,441,296 47,443,013 RGD:1624291
RGD:13792537
RGD:1600115
ubiquitin-dependent glycoprotein ERAD pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 JBrowse link 4 140,886,644 140,918,654 RGD:1624291
G Edem2 ER degradation enhancing alpha-mannosidase like protein 2 JBrowse link 3 151,232,741 151,258,559 RGD:1624291
ubiquitin-dependent protein catabolic process via the N-end rule pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ubr1 ubiquitin protein ligase E3 component n-recognin 1 JBrowse link 3 112,800,557 112,910,038 RGD:13792537
G Ubr2 ubiquitin protein ligase E3 component n-recognin 2 JBrowse link 9 16,003,058 16,080,152 RGD:13792537
G Ubr3 ubiquitin protein ligase E3 component n-recognin 3 JBrowse link 3 56,125,927 56,283,908 RGD:13792537

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19312
    metabolic process 11535
      primary metabolic process 10404
        protein metabolic process 5975
          protein catabolic process 950
            proteasomal protein catabolic process 472
              ERAD pathway + 95
              negative regulation of proteasomal protein catabolic process + 55
              positive regulation of proteasomal protein catabolic process + 110
              proteasomal ubiquitin-independent protein catabolic process 25
              proteasome-mediated ubiquitin-dependent protein catabolic process + 407
              regulation of proteasomal protein catabolic process + 187
Path 2
Term Annotations click to browse term
  biological_process 19312
    metabolic process 11535
      organic substance metabolic process 10932
        organonitrogen compound metabolic process 6848
          protein metabolic process 5975
            protein catabolic process 950
              cellular protein catabolic process 785
                proteolysis involved in cellular protein catabolic process 734
                  proteasomal protein catabolic process 472
                    ERAD pathway + 95
                    negative regulation of proteasomal protein catabolic process + 55
                    positive regulation of proteasomal protein catabolic process + 110
                    proteasomal ubiquitin-independent protein catabolic process 25
                    proteasome-mediated ubiquitin-dependent protein catabolic process + 407
                    regulation of proteasomal protein catabolic process + 187
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.