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ONTOLOGY REPORT - ANNOTATIONS


Term:proteasomal protein catabolic process
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Accession:GO:0010498 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds that is mediated by the proteasome.
Synonyms:exact_synonym: proteasome-mediated protein catabolic process;   proteasome-mediated protein catabolism


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proteasomal protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ate1 arginyltransferase 1 JBrowse link 7 130,391,493 130,520,619 RGD:2290270
G Bag6 BCL2-associated athanogene 6 JBrowse link 17 35,135,156 35,147,322 RGD:2290270
G Cul4b cullin 4B JBrowse link X 38,531,616 38,576,196 RGD:2290270
G Ddb1 damage specific DNA binding protein 1 JBrowse link 19 10,605,568 10,629,828 RGD:2290270
G Ddi1 DNA-damage inducible 1 JBrowse link 9 6,265,028 6,266,547 RGD:2290270
G Ddi2 DNA-damage inducible protein 2 JBrowse link 4 141,683,563 141,723,419 RGD:2290270
G Fbxo44 F-box protein 44 JBrowse link 4 148,152,799 148,160,183 RGD:2290270
G Marchf6 membrane associated ring-CH-type finger 6 JBrowse link 15 31,455,899 31,531,082 RGD:2290270
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 JBrowse link 11 98,767,932 98,775,377 RGD:2290270
G Pmp22 peripheral myelin protein 22 JBrowse link 11 63,128,982 63,159,547 RGD:2290270
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 17 10,840,359 12,063,370 RGD:2290270
G Prpf19 pre-mRNA processing factor 19 JBrowse link 19 10,895,231 10,909,559 RGD:2290270
G Psma1 proteasome subunit alpha 1 JBrowse link 7 114,264,550 114,276,116 RGD:2290270
G Psma2 proteasome subunit alpha 2 JBrowse link 13 14,613,242 14,625,673 RGD:2290270
G Psma3 proteasome subunit alpha 3 JBrowse link 12 70,969,283 70,995,877 RGD:2290270
G Psma4 proteasome subunit alpha 4 JBrowse link 9 54,950,781 54,958,034 RGD:2290270
G Psma5 proteasome subunit alpha 5 JBrowse link 3 108,256,926 108,279,952 RGD:2290270
G Psma6 proteasome subunit alpha 6 JBrowse link 12 55,384,222 55,418,459 RGD:2290270
G Psma7 proteasome subunit alpha 7 JBrowse link 2 180,036,367 180,042,464 RGD:2290270
G Psma8 proteasome subunit alpha 8 JBrowse link 18 14,706,135 14,762,301 RGD:2290270
G Psmb1 proteasome (prosome, macropain) subunit, beta type 1 JBrowse link 17 15,475,721 15,498,276 RGD:2290270
G Psmb10 proteasome (prosome, macropain) subunit, beta type 10 JBrowse link 8 105,935,728 105,938,392 RGD:2290270
G Psmb11 proteasome (prosome, macropain) subunit, beta type, 11 JBrowse link 14 54,625,310 54,629,556 RGD:2290270
G Psmb2 proteasome (prosome, macropain) subunit, beta type 2 JBrowse link 4 126,677,637 126,709,715 RGD:2290270
G Psmb3 proteasome (prosome, macropain) subunit, beta type 3 JBrowse link 11 97,703,434 97,713,500 RGD:2290270
G Psmb4 proteasome (prosome, macropain) subunit, beta type 4 JBrowse link 3 94,884,324 94,886,958 RGD:2290270
G Psmb5 proteasome (prosome, macropain) subunit, beta type 5 JBrowse link 14 54,614,120 54,617,995 RGD:2290270
G Psmb6 proteasome (prosome, macropain) subunit, beta type 6 JBrowse link 11 70,525,324 70,527,858 RGD:2290270
G Psmb7 proteasome (prosome, macropain) subunit, beta type 7 JBrowse link 2 38,588,046 38,643,952 RGD:2290270
G Psmb8 proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7) JBrowse link 17 34,198,195 34,201,454 RGD:2290270
G Psmb9 proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2) JBrowse link 17 34,182,030 34,187,330 RGD:2290270
G Rnf41 ring finger protein 41 JBrowse link 10 128,411,616 128,441,441 RGD:2290270
G Socs6 suppressor of cytokine signaling 6 JBrowse link 18 88,865,169 88,894,364 RGD:2290270
G Vcp valosin containing protein JBrowse link 4 42,979,964 43,000,507 RGD:2290270
G Vhl von Hippel-Lindau tumor suppressor JBrowse link 6 113,623,994 113,631,634 RGD:2290270
anaphase-promoting complex-dependent catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Anapc1 anaphase promoting complex subunit 1 JBrowse link 2 128,610,083 128,687,406 RGD:2290270
G Anapc10 anaphase promoting complex subunit 10 JBrowse link 8 79,711,736 79,777,321 RGD:2290270
G Anapc4 anaphase promoting complex subunit 4 JBrowse link 5 52,834,135 52,866,734 RGD:2290270
G Anapc5 anaphase-promoting complex subunit 5 JBrowse link 5 122,787,459 122,822,339 RGD:2290270
G Anapc7 anaphase promoting complex subunit 7 JBrowse link 5 122,422,444 122,444,912 RGD:2290270
G Cdc16 CDC16 cell division cycle 16 JBrowse link 8 13,757,649 13,781,951 RGD:2290270
G Cdc20 cell division cycle 20 JBrowse link 4 118,432,901 118,437,343 RGD:2290270
G Cdc20b cell division cycle 20B JBrowse link 13 113,034,975 113,121,019 RGD:2290270
G Cdc23 CDC23 cell division cycle 23 JBrowse link 18 34,628,348 34,651,749 RGD:2290270
G Cdc26 cell division cycle 26 JBrowse link 4 62,392,344 62,408,625 RGD:2290270
G Cdc27 cell division cycle 27 JBrowse link 11 104,502,524 104,550,620 RGD:2290270
G Cul3 cullin 3 JBrowse link 1 80,264,923 80,340,690 RGD:2290270
G Ecrg4 ECRG4 augurin precursor JBrowse link 1 43,730,602 43,742,564 RGD:2290270
G Fbxo31 F-box protein 31 JBrowse link 8 121,549,443 121,578,864 RGD:2290270
G Fzr1 fizzy and cell division cycle 20 related 1 JBrowse link 10 81,366,879 81,378,370 RGD:2290270
G Ube2c ubiquitin-conjugating enzyme E2C JBrowse link 2 164,769,929 164,772,902 RGD:2290270
G Ube2s ubiquitin-conjugating enzyme E2S JBrowse link 7 4,808,014 4,812,340 RGD:2290270
cytoplasm protein quality control by the ubiquitin-proteasome system term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rnf126 ring finger protein 126 JBrowse link 10 79,758,515 79,771,448 RGD:2290270
ER-associated misfolded protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bag6 BCL2-associated athanogene 6 JBrowse link 17 35,135,156 35,147,322 RGD:2290270
G Derl1 Der1-like domain family, member 1 JBrowse link 15 57,869,502 57,892,418 RGD:2290270
G Pomt2 protein-O-mannosyltransferase 2 JBrowse link 12 87,106,861 87,147,968 RGD:2290270
G Rnf185 ring finger protein 185 JBrowse link 11 3,415,973 3,452,956 RGD:2290270
G Rnf5 ring finger protein 5 JBrowse link 17 34,601,099 34,603,561 RGD:2290270
G Sdf2l1 stromal cell-derived factor 2-like 1 JBrowse link 16 17,130,138 17,132,383 RGD:2290270
G Tor1a torsin family 1, member A (torsin A) JBrowse link 2 30,960,561 30,967,918 RGD:2290270
G Ufd1 ubiquitin recognition factor in ER-associated degradation 1 JBrowse link 16 18,811,736 18,835,261 RGD:2290270
G Uggt1 UDP-glucose glycoprotein glucosyltransferase 1 JBrowse link 1 36,140,028 36,244,320 RGD:2290270
G Uggt2 UDP-glucose glycoprotein glucosyltransferase 2 JBrowse link 14 118,982,006 119,099,796 RGD:2290270
G Vcp valosin containing protein JBrowse link 4 42,979,964 43,000,507 RGD:2290270
ERAD pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Brsk2 BR serine/threonine kinase 2 JBrowse link 7 141,949,751 142,004,244 RGD:2290270
G Ccdc47 coiled-coil domain containing 47 JBrowse link 11 106,199,260 106,216,523 RGD:2290270
G Derl1 Der1-like domain family, member 1 JBrowse link 15 57,869,502 57,892,418 RGD:2290270
G Dnajb12 DnaJ heat shock protein family (Hsp40) member B12 JBrowse link 10 59,879,571 59,899,302 RGD:2290270
G Rcn3 reticulocalbin 3, EF-hand calcium binding domain JBrowse link 7 45,082,914 45,092,322 RGD:2290270
G Rhbdd1 rhomboid domain containing 1 JBrowse link 1 82,316,457 82,445,366 RGD:2290270
G Rnf139 ring finger protein 139 JBrowse link 15 58,889,229 58,902,390 RGD:2290270
G Rnf185 ring finger protein 185 JBrowse link 11 3,415,973 3,452,956 RGD:2290270
G Rnf5 ring finger protein 5 JBrowse link 17 34,601,099 34,603,561 RGD:2290270
G Sel1l sel-1 suppressor of lin-12-like (C. elegans) JBrowse link 12 91,806,043 91,849,157 RGD:2290270
G Syvn1 synovial apoptosis inhibitor 1, synoviolin JBrowse link 19 6,046,576 6,053,718 RGD:2290270
G Ubxn6 UBX domain protein 6 JBrowse link 17 56,068,249 56,079,333 RGD:2290270
G Vcp valosin containing protein JBrowse link 4 42,979,964 43,000,507 RGD:2290270
maintenance of unfolded protein involved in ERAD pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bag6 BCL2-associated athanogene 6 JBrowse link 17 35,135,156 35,147,322 RGD:2290270
G Get4 golgi to ER traffic protein 4 JBrowse link 5 139,252,324 139,270,050 RGD:2290270
G Usp13 ubiquitin specific peptidase 13 (isopeptidase T-3) JBrowse link 3 32,816,283 32,938,075 RGD:2290270
mannose trimming involved in glycoprotein ERAD pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Edem1 ER degradation enhancer, mannosidase alpha-like 1 JBrowse link 6 108,824,045 108,859,356 RGD:2290270
G Edem2 ER degradation enhancer, mannosidase alpha-like 2 JBrowse link 2 155,701,673 155,729,475 RGD:2290270
G Edem3 ER degradation enhancer, mannosidase alpha-like 3 JBrowse link 1 151,755,344 151,822,328 RGD:2290270
G Man1b1 mannosidase, alpha, class 1B, member 1 JBrowse link 2 25,332,730 25,352,213 RGD:2290270
membrane protein proteolysis involved in retrograde protein transport, ER to cytosol term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G H13 histocompatibility 13 JBrowse link 2 152,669,422 152,708,668 RGD:2290270
G Rhbdd1 rhomboid domain containing 1 JBrowse link 1 82,316,457 82,445,366 RGD:2290270
mitochondria-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ankzf1 ankyrin repeat and zinc finger domain containing 1 JBrowse link 1 75,192,160 75,199,387 RGD:2290270
negative regulation of ER-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sgta small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha JBrowse link 10 81,044,071 81,060,271 RGD:2290270
G Svip small VCP/p97-interacting protein JBrowse link 7 51,997,161 52,006,018 RGD:2290270
G Usp14 ubiquitin specific peptidase 14 JBrowse link 18 9,993,615 10,030,149 RGD:2290270
negative regulation of ERAD pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aqp11 aquaporin 11 JBrowse link 7 97,726,379 97,738,247 RGD:2290270
G Ubxn1 UBX domain protein 1 JBrowse link 19 8,871,548 8,875,666 RGD:2290270
G Usp25 ubiquitin specific peptidase 25 JBrowse link 16 77,013,684 77,116,783 RGD:2290270
negative regulation of proteasomal protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Alad aminolevulinate, delta-, dehydratase JBrowse link 4 62,505,984 62,520,063 RGD:2290270
G Gabarapl2 gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2 JBrowse link 8 111,940,703 111,952,915 RGD:2290270
G Hsp90ab1 heat shock protein 90 alpha (cytosolic), class B member 1 JBrowse link 17 45,567,778 45,573,261 RGD:2290270
G Lamp3 lysosomal-associated membrane protein 3 JBrowse link 16 19,653,381 19,706,365 RGD:2290270
G Marchf7 membrane associated ring-CH-type finger 7 JBrowse link 2 60,209,936 60,248,385 RGD:2290270
G Ophn1 oligophrenin 1 JBrowse link X 98,554,280 98,891,082 RGD:2290270
G Prkcg protein kinase C, gamma JBrowse link 7 3,303,532 3,331,099 RGD:2290270
G Psme3ip1 proteasome activator subunit 3 interacting protein 1 JBrowse link 8 94,574,940 94,601,962 RGD:2290270
G Psmf1 proteasome (prosome, macropain) inhibitor subunit 1 JBrowse link 2 151,716,062 151,744,199 RGD:2290270
G Sco1 SCO1 cytochrome c oxidase assembly protein JBrowse link 11 67,052,600 67,067,444 RGD:2290270
G Usp19 ubiquitin specific peptidase 19 JBrowse link 9 108,490,607 108,502,337 RGD:2290270
negative regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bag5 BCL2-associated athanogene 5 JBrowse link 12 111,709,488 111,713,858 RGD:2290270
G Bag6 BCL2-associated athanogene 6 JBrowse link 17 35,135,156 35,147,322 RGD:2290270
G Caml calcium modulating ligand JBrowse link 13 55,623,005 55,632,416 RGD:2290270
G Ccar2 cell cycle activator and apoptosis regulator 2 JBrowse link 14 70,138,168 70,153,791 RGD:2290270
G Clec16a C-type lectin domain family 16, member A JBrowse link 16 10,545,309 10,744,878 RGD:2290270
G Ddrgk1 DDRGK domain containing 1 JBrowse link 2 130,654,033 130,664,654 RGD:2290270
G Fhit fragile histidine triad gene JBrowse link 14 9,550,092 11,162,061 RGD:2290270
G Gipc1 GIPC PDZ domain containing family, member 1 JBrowse link 8 83,649,408 83,664,789 RGD:2290270
G Hfe homeostatic iron regulator JBrowse link 13 23,702,034 23,710,854 RGD:2290270
G Hsp90ab1 heat shock protein 90 alpha (cytosolic), class B member 1 JBrowse link 17 45,567,778 45,573,261 RGD:2290270
G Klhl40 kelch-like 40 JBrowse link 9 121,777,499 121,791,200 RGD:2290270
G Map1a microtubule-associated protein 1 A JBrowse link 2 121,289,590 121,310,832 RGD:2290270
G Mtm1 X-linked myotubular myopathy gene 1 JBrowse link X 71,210,767 71,315,413 RGD:2290270
G N4bp1 NEDD4 binding protein 1 JBrowse link 8 86,841,136 86,885,296 RGD:2290270
G Nop53 NOP53 ribosome biogenesis factor JBrowse link 7 15,937,835 15,946,108 RGD:2290270
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) JBrowse link X 101,640,011 101,684,351 RGD:2290270
G Park7 Parkinson disease (autosomal recessive, early onset) 7 JBrowse link 4 150,897,133 150,909,921 RGD:2290270
G Pbk PDZ binding kinase JBrowse link 14 65,805,911 65,817,822 RGD:2290270
G Rpl11 ribosomal protein L11 JBrowse link 4 136,049,354 136,053,393 RGD:2290270
G Rybp RING1 and YY1 binding protein JBrowse link 6 100,228,565 100,287,358 RGD:2290270
G Sdcbp syndecan binding protein JBrowse link 4 6,365,680 6,396,122 RGD:2290270
G Senp1 SUMO1/sentrin specific peptidase 1 JBrowse link 15 98,038,744 98,093,569 RGD:2290270
G Shh sonic hedgehog JBrowse link 5 28,456,840 28,467,101 RGD:2290270
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 JBrowse link 9 110,132,024 110,240,178 RGD:2290270
G Taf9 TATA-box binding protein associated factor 9 JBrowse link 13 100,651,343 100,656,060 RGD:2290270
G Tlk2 tousled-like kinase 2 (Arabidopsis) JBrowse link 11 105,167,895 105,283,959 RGD:2290270
G Trim39 tripartite motif-containing 39 JBrowse link 17 36,258,872 36,272,004 RGD:2290270
G Ubxn1 UBX domain protein 1 JBrowse link 19 8,871,548 8,875,666 RGD:2290270
G Uchl5 ubiquitin carboxyl-terminal esterase L5 JBrowse link 1 143,777,234 143,807,466 RGD:2290270
G Usp7 ubiquitin specific peptidase 7 JBrowse link 16 8,688,722 8,757,067 RGD:2290270
G Wac WW domain containing adaptor with coiled-coil JBrowse link 18 7,868,825 7,929,028 RGD:2290270
negative regulation of retrograde protein transport, ER to cytosol term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Derl2 Der1-like domain family, member 2 JBrowse link 11 71,007,440 71,019,841 RGD:2290270
G Derl3 Der1-like domain family, member 3 JBrowse link 10 75,893,398 75,895,941 RGD:2290270
G Erlec1 endoplasmic reticulum lectin 1 JBrowse link 11 30,862,794 30,954,386 RGD:2290270
G Os9 amplified in osteosarcoma JBrowse link 10 127,094,259 127,121,160 RGD:2290270
G Svip small VCP/p97-interacting protein JBrowse link 7 51,997,161 52,006,018 RGD:2290270
G Ubac2 ubiquitin associated domain containing 2 JBrowse link 14 121,878,559 122,021,035 RGD:2290270
G Ube2g2 ubiquitin-conjugating enzyme E2G 2 JBrowse link 10 77,622,321 77,645,990 RGD:2290270
G Ube2j1 ubiquitin-conjugating enzyme E2J 1 JBrowse link 4 33,031,380 33,052,367 RGD:2290270
G Yod1 YOD1 deubiquitinase JBrowse link 1 130,717,327 130,722,073 RGD:2290270
negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Styx serine/threonine/tyrosine interaction protein JBrowse link 14 45,351,186 45,376,884 RGD:2290270
nuclear protein quality control by the ubiquitin-proteasome system term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ankzf1 ankyrin repeat and zinc finger domain containing 1 JBrowse link 1 75,192,160 75,199,387 RGD:2290270
G Cul3 cullin 3 JBrowse link 1 80,264,923 80,340,690 RGD:2290270
G Klhl15 kelch-like 15 JBrowse link X 94,232,278 94,277,724 RGD:2290270
positive regulation of anaphase-promoting complex-dependent catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdc20 cell division cycle 20 JBrowse link 4 118,432,901 118,437,343 RGD:2290270
G Cdc20b cell division cycle 20B JBrowse link 13 113,034,975 113,121,019 RGD:2290270
G Fzr1 fizzy and cell division cycle 20 related 1 JBrowse link 10 81,366,879 81,378,370 RGD:2290270
positive regulation of ER-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcap31 B cell receptor associated protein 31 JBrowse link X 73,686,178 73,717,815 RGD:2290270
G Cav1 caveolin 1, caveolae protein JBrowse link 6 17,306,335 17,341,328 RGD:2290270
G Herpud1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 JBrowse link 8 94,386,429 94,395,371 RGD:2290270
G Sgta small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha JBrowse link 10 81,044,071 81,060,271 RGD:2290270
G Ubqln1 ubiquilin 1 JBrowse link 13 58,176,156 58,215,653 RGD:2290270
G Ubqln2 ubiquilin 2 JBrowse link X 153,498,232 153,501,562 RGD:2290270
positive regulation of ERAD pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atxn3 ataxin 3 JBrowse link 12 101,918,901 101,959,121 RGD:2290270
G Bag6 BCL2-associated athanogene 6 JBrowse link 17 35,135,156 35,147,322 RGD:2290270
G Rnf185 ring finger protein 185 JBrowse link 11 3,415,973 3,452,956 RGD:2290270
G Rnft1 ring finger protein, transmembrane 1 JBrowse link 11 86,484,657 86,499,007 RGD:2290270
G Tmem259 transmembrane protein 259 JBrowse link 10 79,977,120 79,984,325 RGD:2290270
G Tmem67 transmembrane protein 67 JBrowse link 4 12,039,355 12,090,020 RGD:2290270
G Usp13 ubiquitin specific peptidase 13 (isopeptidase T-3) JBrowse link 3 32,816,283 32,938,075 RGD:2290270
positive regulation of proteasomal protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bag2 BCL2-associated athanogene 2 JBrowse link 1 33,745,484 33,757,750 RGD:2290270
G Dab2ip disabled 2 interacting protein JBrowse link 2 35,558,446 35,730,994 RGD:2290270
G Ddrgk1 DDRGK domain containing 1 JBrowse link 2 130,654,033 130,664,654 RGD:2290270
G Ecscr endothelial cell surface expressed chemotaxis and apoptosis regulator JBrowse link 18 35,713,086 35,722,413 RGD:2290270
G Fbxw7 F-box and WD-40 domain protein 7 JBrowse link 3 84,814,990 84,979,198 RGD:2290270
G Fmr1 FMRP translational regulator 1 JBrowse link X 68,678,536 68,717,963 RGD:2290270
G Kcne2 potassium voltage-gated channel, Isk-related subfamily, gene 2 JBrowse link 16 92,292,389 92,298,133 RGD:2290270
G Nupr1 nuclear protein transcription regulator 1 JBrowse link 7 126,623,246 126,625,470 RGD:2290270
G Osbpl7 oxysterol binding protein-like 7 JBrowse link 11 97,050,633 97,068,904 RGD:2290270
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 17 10,840,359 12,063,370 RGD:2290270
G Rnf40 ring finger protein 40 JBrowse link 7 127,588,698 127,603,605 RGD:2290270
G Tmtc3 transmembrane and tetratricopeptide repeat containing 3 JBrowse link 10 100,443,902 100,487,365 RGD:2290270
G Trem2 triggering receptor expressed on myeloid cells 2 JBrowse link 17 48,346,401 48,352,276 RGD:2290270
G Xbp1 X-box binding protein 1 JBrowse link 11 5,520,641 5,525,993 RGD:2290270
positive regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akt1 thymoma viral proto-oncogene 1 JBrowse link 12 112,653,821 112,674,884 RGD:2290270
G Ankib1 ankyrin repeat and IBR domain containing 1 JBrowse link 5 3,689,999 3,803,124 RGD:2290270
G Arih1 ariadne RBR E3 ubiquitin protein ligase 1 JBrowse link 9 59,388,554 59,488,186 RGD:2290270
G Arih2 ariadne RBR E3 ubiquitin protein ligase 2 JBrowse link 9 108,602,942 108,653,681 RGD:2290270
G Atg7 autophagy related 7 JBrowse link 6 114,643,097 114,860,614 RGD:2290270
G Aurka aurora kinase A JBrowse link 2 172,356,190 172,370,886 RGD:2290270
G Axin1 axin 1 JBrowse link 17 26,131,217 26,195,811 RGD:2290270
G Bag2 BCL2-associated athanogene 2 JBrowse link 1 33,745,484 33,757,750 RGD:2290270
G Bbs7 Bardet-Biedl syndrome 7 (human) JBrowse link 3 36,573,142 36,613,492 RGD:2290270
G Cbfa2t3 CBFA2/RUNX1 translocation partner 3 JBrowse link 8 122,625,136 122,699,332 RGD:2290270
G Chfr checkpoint with forkhead and ring finger domains JBrowse link 5 110,135,755 110,171,973 RGD:2290270
G Clu clusterin JBrowse link 14 65,968,483 65,981,548 RGD:2290270
G Cop1 COP1, E3 ubiquitin ligase JBrowse link 1 159,232,156 159,354,872 RGD:2290270
G Csnk1a1 casein kinase 1, alpha 1 JBrowse link 18 61,554,236 61,590,320 RGD:2290270
G Csnk1d casein kinase 1, delta JBrowse link 11 120,957,709 120,991,350 RGD:2290270
G Csnk1e casein kinase 1, epsilon JBrowse link 15 79,417,852 79,455,579 RGD:2290270
G Dab2 disabled 2, mitogen-responsive phosphoprotein JBrowse link 15 6,299,788 6,440,715 RGD:2290270
G Dda1 DET1 and DDB1 associated 1 JBrowse link 8 71,469,172 71,476,099 RGD:2290270
G Ddrgk1 DDRGK domain containing 1 JBrowse link 2 130,654,033 130,664,654 RGD:2290270
G Det1 de-etiolated homolog 1 (Arabidopsis) JBrowse link 7 78,821,545 78,847,524 RGD:2290270
G Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 JBrowse link 1 75,236,395 75,245,692 RGD:2290270
G Dvl1 dishevelled segment polarity protein 1 JBrowse link 4 155,847,402 155,859,303 RGD:2290270
G E330034G19Rik RIKEN cDNA E330034G19 gene JBrowse link 14 24,293,214 24,309,960 RGD:2290270
G Fam122a family with sequence similarity 122, member A JBrowse link 19 24,475,779 24,477,474 RGD:2290270
G Fbxo22 F-box protein 22 JBrowse link 9 55,208,935 55,224,433 RGD:2290270
G Gba glucosidase, beta, acid JBrowse link 3 89,202,905 89,208,873 RGD:2290270
G Gclc glutamate-cysteine ligase, catalytic subunit JBrowse link 9 77,754,535 77,794,489 RGD:2290270
G Gsk3a glycogen synthase kinase 3 alpha JBrowse link 7 25,228,258 25,237,851 RGD:2290270
G Gsk3b glycogen synthase kinase 3 beta JBrowse link 16 38,089,001 38,246,084 RGD:2290270
G Hspa1a heat shock protein 1A JBrowse link 17 34,969,359 34,972,156 RGD:2290270
G Hspa1b heat shock protein 1B JBrowse link 17 34,956,429 34,959,238 RGD:2290270
G Hspbp1 HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 JBrowse link 7 4,660,515 4,685,188 RGD:2290270
G Il33 interleukin 33 JBrowse link 19 29,925,113 29,960,718 RGD:2290270
G Klhl40 kelch-like 40 JBrowse link 9 121,777,499 121,791,200 RGD:2290270
G Lrrk2 leucine-rich repeat kinase 2 JBrowse link 15 91,672,791 91,816,124 RGD:2290270
G Mdm2 transformed mouse 3T3 cell double minute 2 JBrowse link 10 117,688,875 117,710,758 RGD:2290270
G Nkd2 naked cuticle 2 JBrowse link 13 73,818,534 73,847,631 RGD:2290270
G Nop53 NOP53 ribosome biogenesis factor JBrowse link 7 15,937,835 15,946,108 RGD:2290270
G Nub1 negative regulator of ubiquitin-like proteins 1 JBrowse link 5 24,685,815 24,710,378 RGD:2290270
G Pias1 protein inhibitor of activated STAT 1 JBrowse link 9 62,878,366 62,980,879 RGD:2290270
G Plk1 polo like kinase 1 JBrowse link 7 122,159,435 122,169,884 RGD:2290270
G Plk2 polo like kinase 2 JBrowse link 13 110,395,044 110,400,844 RGD:2290270
G Prickle1 prickle planar cell polarity protein 1 JBrowse link 15 93,499,111 93,596,266 RGD:2290270
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 17 10,840,359 12,063,370 RGD:2290270
G Psen1 presenilin 1 JBrowse link 12 83,688,152 83,735,095 RGD:2290270
G Psen2 presenilin 2 JBrowse link 1 180,227,004 180,263,467 RGD:2290270
G Psmd10 proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 JBrowse link X 140,948,425 140,956,711 RGD:2290270
G Rack1 receptor for activated C kinase 1 JBrowse link 11 48,800,360 48,806,241 RGD:2290270
G Rad23a RAD23 homolog A, nucleotide excision repair protein JBrowse link 8 84,834,652 84,840,736 RGD:2290270
G Rchy1 ring finger and CHY zinc finger domain containing 1 JBrowse link 5 91,948,842 91,963,145 RGD:2290270
G Rnf14 ring finger protein 14 JBrowse link 18 38,277,460 38,317,852 RGD:2290270
G Rnf144a ring finger protein 144A JBrowse link 12 26,306,794 26,415,319 RGD:2290270
G Rnf144b ring finger protein 144B JBrowse link 13 47,122,720 47,247,991 RGD:2290270
G Rnf180 ring finger protein 180 JBrowse link 13 105,130,567 105,294,818 RGD:2290270
G Rnf19a ring finger protein 19A JBrowse link 15 36,239,934 36,283,147 RGD:2290270
G Rnf19b ring finger protein 19B JBrowse link 4 129,058,144 129,084,526 RGD:2290270
G Rnf217 ring finger protein 217 JBrowse link 10 31,501,887 31,609,725 RGD:2290270
G Sh3rf2 SH3 domain containing ring finger 2 JBrowse link 18 42,052,502 42,158,695 RGD:2290270
G Sirt2 sirtuin 2 JBrowse link 7 28,766,752 28,788,665 RGD:2290270
G Smad7 SMAD family member 7 JBrowse link 18 75,367,365 75,395,935 RGD:2290270
G Socs4 suppressor of cytokine signaling 4 JBrowse link 14 47,277,143 47,291,591 RGD:2290270
G Socs5 suppressor of cytokine signaling 5 JBrowse link 17 87,107,278 87,137,647 RGD:2290270
G Stub1 STIP1 homology and U-Box containing protein 1 JBrowse link 17 25,830,634 25,832,919 RGD:2290270
G Sumo1 small ubiquitin-like modifier 1 JBrowse link 1 59,639,434 59,670,834 RGD:2290270
G Sumo2 small ubiquitin-like modifier 2 JBrowse link 11 115,523,109 115,536,230 RGD:2290270
G Taf1 TATA-box binding protein associated factor 1 JBrowse link X 101,527,572 101,601,789 RGD:2290270
G Trib1 tribbles pseudokinase 1 JBrowse link 15 59,648,654 59,657,099 RGD:2290270
G Trib2 tribbles pseudokinase 2 JBrowse link 12 15,791,725 15,816,962 RGD:2290270
G Trib3 tribbles pseudokinase 3 JBrowse link 2 152,337,425 152,344,060 RGD:2290270
G Ube2v2 ubiquitin-conjugating enzyme E2 variant 2 JBrowse link 16 15,550,986 15,594,518 RGD:2290270
G Usp5 ubiquitin specific peptidase 5 (isopeptidase T) JBrowse link 6 124,815,019 124,829,484 RGD:2290270
G Vcp valosin containing protein JBrowse link 4 42,979,964 43,000,507 RGD:2290270
G Zer1 zyg-11 related, cell cycle regulator JBrowse link 2 30,097,283 30,126,287 RGD:2290270
G Zfand2a zinc finger, AN1-type domain 2A JBrowse link 5 139,471,216 139,484,491 RGD:2290270
G Zyg11b zyg-ll family member B, cell cycle regulator JBrowse link 4 108,227,755 108,301,125 RGD:2290270
positive regulation of proteasomal ubiquitin-dependent protein catabolic process involved in cellular response to hypoxia term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Plk3 polo like kinase 3 JBrowse link 4 117,128,655 117,133,963 RGD:2290270
G Sirt2 sirtuin 2 JBrowse link 7 28,766,752 28,788,665 RGD:2290270
positive regulation of retrograde protein transport, ER to cytosol term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcap31 B cell receptor associated protein 31 JBrowse link X 73,686,178 73,717,815 RGD:2290270
G Edem1 ER degradation enhancer, mannosidase alpha-like 1 JBrowse link 6 108,824,045 108,859,356 RGD:2290270
G Edem2 ER degradation enhancer, mannosidase alpha-like 2 JBrowse link 2 155,701,673 155,729,475 RGD:2290270
positive regulation of transcription factor catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fbxw8 F-box and WD-40 domain protein 8 JBrowse link 5 118,064,981 118,155,458 RGD:2290270
G Mapk8 mitogen-activated protein kinase 8 JBrowse link 14 33,377,898 33,447,353 RGD:2290270
G Mapk9 mitogen-activated protein kinase 9 JBrowse link 11 49,846,728 49,886,421 RGD:2290270
G Sirt6 sirtuin 6 JBrowse link 10 81,621,786 81,627,792 RGD:2290270
proteasomal ubiquitin-independent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Enc1 ectodermal-neural cortex 1 JBrowse link 13 97,241,105 97,253,040 RGD:2290270
G Nfe2l2 nuclear factor, erythroid derived 2, like 2 JBrowse link 2 75,675,513 75,704,663 RGD:2290270
G Psma1 proteasome subunit alpha 1 JBrowse link 7 114,264,550 114,276,116 RGD:2290270
G Psma2 proteasome subunit alpha 2 JBrowse link 13 14,613,242 14,625,673 RGD:2290270
G Psma3 proteasome subunit alpha 3 JBrowse link 12 70,969,283 70,995,877 RGD:2290270
G Psma4 proteasome subunit alpha 4 JBrowse link 9 54,950,781 54,958,034 RGD:2290270
G Psma5 proteasome subunit alpha 5 JBrowse link 3 108,256,926 108,279,952 RGD:2290270
G Psma6 proteasome subunit alpha 6 JBrowse link 12 55,384,222 55,418,459 RGD:2290270
G Psma7 proteasome subunit alpha 7 JBrowse link 2 180,036,367 180,042,464 RGD:2290270
G Psma8 proteasome subunit alpha 8 JBrowse link 18 14,706,135 14,762,301 RGD:2290270
G Psmb1 proteasome (prosome, macropain) subunit, beta type 1 JBrowse link 17 15,475,721 15,498,276 RGD:2290270
G Psmb10 proteasome (prosome, macropain) subunit, beta type 10 JBrowse link 8 105,935,728 105,938,392 RGD:2290270
G Psmb11 proteasome (prosome, macropain) subunit, beta type, 11 JBrowse link 14 54,625,310 54,629,556 RGD:2290270
G Psmb2 proteasome (prosome, macropain) subunit, beta type 2 JBrowse link 4 126,677,637 126,709,715 RGD:2290270
G Psmb3 proteasome (prosome, macropain) subunit, beta type 3 JBrowse link 11 97,703,434 97,713,500 RGD:2290270
G Psmb4 proteasome (prosome, macropain) subunit, beta type 4 JBrowse link 3 94,884,324 94,886,958 RGD:2290270
G Psmb5 proteasome (prosome, macropain) subunit, beta type 5 JBrowse link 14 54,614,120 54,617,995 RGD:2290270
G Psmb6 proteasome (prosome, macropain) subunit, beta type 6 JBrowse link 11 70,525,324 70,527,858 RGD:2290270
G Psmb7 proteasome (prosome, macropain) subunit, beta type 7 JBrowse link 2 38,588,046 38,643,952 RGD:2290270
G Psmb8 proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7) JBrowse link 17 34,198,195 34,201,454 RGD:2290270
G Psmb9 proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2) JBrowse link 17 34,182,030 34,187,330 RGD:2290270
G Psme4 proteasome (prosome, macropain) activator subunit 4 JBrowse link 11 30,771,775 30,881,150 RGD:2290270
proteasome-mediated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agap3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 JBrowse link 5 24,452,177 24,502,047 RGD:2290270
G Arel1 apoptosis resistant E3 ubiquitin protein ligase 1 JBrowse link 12 84,918,140 84,970,878 RGD:2290270
G Armc8 armadillo repeat containing 8 JBrowse link 9 99,478,385 99,568,907 RGD:2290270
G Arntl aryl hydrocarbon receptor nuclear translocator-like JBrowse link 7 113,178,471 113,314,126 RGD:2290270
G Arrb1 arrestin, beta 1 JBrowse link 7 99,535,147 99,606,772 RGD:2290270
G Arrb2 arrestin, beta 2 JBrowse link 11 70,432,485 70,440,828 RGD:2290270
G Atxn3 ataxin 3 JBrowse link 12 101,918,901 101,959,121 RGD:2290270
G Bag6 BCL2-associated athanogene 6 JBrowse link 17 35,135,156 35,147,322 RGD:2290270
G Bfar bifunctional apoptosis regulator JBrowse link 16 13,671,858 13,703,612 RGD:2290270
G Birc2 baculoviral IAP repeat-containing 2 JBrowse link 9 7,818,226 7,837,131 RGD:2290270
G Btrc beta-transducin repeat containing protein JBrowse link 19 45,363,688 45,533,343 RGD:2290270
G Cd2ap CD2-associated protein JBrowse link 17 42,748,887 42,876,707 RGD:2290270
G Cdc34 cell division cycle 34 JBrowse link 10 79,682,193 79,688,398 RGD:2290270
G Clock circadian locomotor output cycles kaput JBrowse link 5 76,209,868 76,305,603 RGD:2290270
G Cop1 COP1, E3 ubiquitin ligase JBrowse link 1 159,232,156 159,354,872 RGD:2290270
G Crbn cereblon JBrowse link 6 106,778,244 106,800,099 RGD:2290270
G Ctnnb1 catenin (cadherin associated protein), beta 1 JBrowse link 9 120,933,400 120,960,507 RGD:2290270
G Cul1 cullin 1 JBrowse link 6 47,453,732 47,526,144 RGD:2290270
G Cul2 cullin 2 JBrowse link 18 3,382,970 3,436,700 RGD:2290270
G Cul3 cullin 3 JBrowse link 1 80,264,923 80,340,690 RGD:2290270
G Cul4a cullin 4A JBrowse link 8 13,105,623 13,147,940 RGD:2290270
G Cul4b cullin 4B JBrowse link X 38,531,616 38,576,196 RGD:2290270
G Cul5 cullin 5 JBrowse link 9 53,614,581 53,667,507 RGD:2290270
G Dcaf11 DDB1 and CUL4 associated factor 11 JBrowse link 14 55,559,125 55,570,065 RGD:2290270
G Ddb1 damage specific DNA binding protein 1 JBrowse link 19 10,605,568 10,629,828 RGD:2290270
G Ddit3 DNA-damage inducible transcript 3 JBrowse link 10 127,290,793 127,296,291 RGD:2290270
G Derl1 Der1-like domain family, member 1 JBrowse link 15 57,869,502 57,892,418 RGD:2290270
G Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 JBrowse link 1 75,236,395 75,245,692 RGD:2290270
G Edem3 ER degradation enhancer, mannosidase alpha-like 3 JBrowse link 1 151,755,344 151,822,328 RGD:2290270
G Epm2a epilepsy, progressive myoclonic epilepsy, type 2 gene alpha JBrowse link 10 11,342,691 11,459,664 RGD:2290270
G Ercc8 excision repaiross-complementing rodent repair deficiency, complementation group 8 JBrowse link 13 108,158,711 108,201,204 RGD:2290270
G Faf2 Fas associated factor family member 2 JBrowse link 13 54,621,784 54,664,063 RGD:2290270
G Fbxl17 F-box and leucine-rich repeat protein 17 JBrowse link 17 63,045,949 63,504,184 RGD:2290270
G Fbxl19 F-box and leucine-rich repeat protein 19 JBrowse link 7 127,743,887 127,769,483 RGD:2290270
G Fbxl22 F-box and leucine-rich repeat protein 22 JBrowse link 9 66,508,459 66,514,593 RGD:2290270
G Fbxl3 F-box and leucine-rich repeat protein 3 JBrowse link 14 103,080,239 103,099,566 RGD:2290270
G Fbxo45 F-box protein 45 JBrowse link 16 32,230,112 32,247,025 RGD:2290270
G Fbxw11 F-box and WD-40 domain protein 11 JBrowse link 11 32,642,555 32,746,816 RGD:2290270
G Fbxw5 F-box and WD-40 domain protein 5 JBrowse link 2 25,500,750 25,505,470 RGD:2290270
G Fbxw7 F-box and WD-40 domain protein 7 JBrowse link 3 84,814,990 84,979,198 RGD:2290270
G Gid4 GID complex subunit 4, VID24 homolog JBrowse link 11 60,417,145 60,445,277 RGD:2290270
G Gid8 GID complex subunit 8 JBrowse link 2 180,710,122 180,721,599 RGD:2290270
G Gsk3a glycogen synthase kinase 3 alpha JBrowse link 7 25,228,258 25,237,851 RGD:2290270
G Hace1 HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1 JBrowse link 10 45,577,814 45,712,345 RGD:2290270
G Hectd3 HECT domain E3 ubiquitin protein ligase 3 JBrowse link 4 116,995,296 117,005,277 RGD:2290270
G Hecw1 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 JBrowse link 13 14,226,438 14,523,289 RGD:2290270
G Hecw2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 JBrowse link 1 53,806,872 54,195,034 RGD:2290270
G Herc2 HECT and RLD domain containing E3 ubiquitin protein ligase 2 JBrowse link 7 56,050,124 56,231,800 RGD:2290270
G Itch itchy, E3 ubiquitin protein ligase JBrowse link 2 155,133,481 155,226,855 RGD:2290270
G Kat5 K(lysine) acetyltransferase 5 JBrowse link 19 5,603,014 5,611,556 RGD:2290270
G Kctd10 potassium channel tetramerisation domain containing 10 JBrowse link 5 114,363,572 114,380,505 RGD:2290270
G Kctd13 potassium channel tetramerisation domain containing 13 JBrowse link 7 126,928,840 126,947,897 RGD:2290270
G Kctd17 potassium channel tetramerisation domain containing 17 JBrowse link 15 78,428,564 78,439,303 RGD:2290270
G Kctd2 potassium channel tetramerisation domain containing 2 JBrowse link 11 115,420,094 115,431,274 RGD:2290270
G Kctd5 potassium channel tetramerisation domain containing 5 JBrowse link 17 24,047,720 24,073,485 RGD:2290270
G Kif14 kinesin family member 14 JBrowse link 1 136,466,301 136,555,938 RGD:2290270
G Klhl20 kelch-like 20 JBrowse link 1 161,088,375 161,131,508 RGD:2290270
G Klhl22 kelch-like 22 JBrowse link 16 17,759,621 17,793,382 RGD:2290270
G Klhl42 kelch-like 42 JBrowse link 6 147,090,615 147,112,778 RGD:2290270
G Ltn1 listerin E3 ubiquitin protein ligase 1 JBrowse link 16 87,376,651 87,432,619 RGD:2290270
G Maea macrophage erythroblast attacher JBrowse link 5 33,335,572 33,373,294 RGD:2290270
G Marchf6 membrane associated ring-CH-type finger 6 JBrowse link 15 31,455,899 31,531,082 RGD:2290270
G Mta1 metastasis associated 1 JBrowse link 12 113,098,248 113,137,206 RGD:2290270
G Nedd4 neural precursor cell expressed, developmentally down-regulated 4 JBrowse link 9 72,662,331 72,749,851 RGD:2290270
G Nedd4l neural precursor cell expressed, developmentally down-regulated gene 4-like JBrowse link 18 64,884,480 65,217,826 RGD:2290270
G Nfe2l2 nuclear factor, erythroid derived 2, like 2 JBrowse link 2 75,675,513 75,704,663 RGD:2290270
G Nhlrc1 NHL repeat containing 1 JBrowse link 13 47,012,557 47,014,850 RGD:2290270
G Nhlrc3 NHL repeat containing 3 JBrowse link 3 53,451,996 53,463,258 RGD:2290270
G Nsfl1c NSFL1 (p97) cofactor (p47) JBrowse link 2 151,494,182 151,511,310 RGD:2290270
G Otud5 OTU domain containing 5 JBrowse link X 7,839,613 7,876,626 RGD:2290270
G Pcbp2 poly(rC) binding protein 2 JBrowse link 15 102,470,450 102,500,059 RGD:2290270
G Pcnp PEST proteolytic signal containing nuclear protein JBrowse link 16 56,015,507 56,029,727 RGD:2290270
G Peli1 pellino 1 JBrowse link 11 21,091,283 21,150,327 RGD:2290270
G Plaa phospholipase A2, activating protein JBrowse link 4 94,565,139 94,603,247 RGD:2290270
G Pml promyelocytic leukemia JBrowse link 9 58,217,179 58,249,796 RGD:2290270
G Pmp22 peripheral myelin protein 22 JBrowse link 11 63,128,982 63,159,547 RGD:2290270
G Ppp2cb protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform JBrowse link 8 33,599,621 33,619,804 RGD:2290270
G Ppp2r5c protein phosphatase 2, regulatory subunit B', gamma JBrowse link 12 110,447,144 110,583,075 RGD:2290270
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 17 10,840,359 12,063,370 RGD:2290270
G Psma1 proteasome subunit alpha 1 JBrowse link 7 114,264,550 114,276,116 RGD:2290270
G Psma2 proteasome subunit alpha 2 JBrowse link 13 14,613,242 14,625,673 RGD:2290270
G Psma3 proteasome subunit alpha 3 JBrowse link 12 70,969,283 70,995,877 RGD:2290270
G Psma4 proteasome subunit alpha 4 JBrowse link 9 54,950,781 54,958,034 RGD:2290270
G Psma5 proteasome subunit alpha 5 JBrowse link 3 108,256,926 108,279,952 RGD:2290270
G Psma6 proteasome subunit alpha 6 JBrowse link 12 55,384,222 55,418,459 RGD:2290270
G Psma7 proteasome subunit alpha 7 JBrowse link 2 180,036,367 180,042,464 RGD:2290270
G Psma8 proteasome subunit alpha 8 JBrowse link 18 14,706,135 14,762,301 RGD:2290270
G Psmb1 proteasome (prosome, macropain) subunit, beta type 1 JBrowse link 17 15,475,721 15,498,276 RGD:2290270
G Psmb10 proteasome (prosome, macropain) subunit, beta type 10 JBrowse link 8 105,935,728 105,938,392 RGD:2290270
G Psmb11 proteasome (prosome, macropain) subunit, beta type, 11 JBrowse link 14 54,625,310 54,629,556 RGD:2290270
G Psmb2 proteasome (prosome, macropain) subunit, beta type 2 JBrowse link 4 126,677,637 126,709,715 RGD:2290270
G Psmb3 proteasome (prosome, macropain) subunit, beta type 3 JBrowse link 11 97,703,434 97,713,500 RGD:2290270
G Psmb4 proteasome (prosome, macropain) subunit, beta type 4 JBrowse link 3 94,884,324 94,886,958 RGD:2290270
G Psmb5 proteasome (prosome, macropain) subunit, beta type 5 JBrowse link 14 54,614,120 54,617,995 RGD:2290270
G Psmb6 proteasome (prosome, macropain) subunit, beta type 6 JBrowse link 11 70,525,324 70,527,858 RGD:2290270
G Psmb7 proteasome (prosome, macropain) subunit, beta type 7 JBrowse link 2 38,588,046 38,643,952 RGD:2290270
G Psmb8 proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7) JBrowse link 17 34,198,195 34,201,454 RGD:2290270
G Psmb9 proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2) JBrowse link 17 34,182,030 34,187,330 RGD:2290270
G Psmc5 protease (prosome, macropain) 26S subunit, ATPase 5 JBrowse link 11 106,256,185 106,263,112 RGD:2290270
G Psmd1 proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 JBrowse link 1 86,064,619 86,139,295 RGD:2290270
G Psmd12 proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 JBrowse link 11 107,479,528 107,498,036 RGD:2290270
G Psmd14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 JBrowse link 2 61,711,694 61,800,376 RGD:2290270
G Psmd2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 JBrowse link 16 20,651,122 20,663,414 RGD:2290270
G Psmd4 proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 JBrowse link 3 95,032,688 95,042,614 RGD:2290270
G Psmd6 proteasome (prosome, macropain) 26S subunit, non-ATPase, 6 JBrowse link 14 14,112,185 14,120,945 RGD:2290270
G Psmd7 proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 JBrowse link 8 107,580,380 107,588,482 RGD:2290270
G Psmd8 proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 JBrowse link 7 29,174,187 29,180,673 RGD:2290270
G Rad23a RAD23 homolog A, nucleotide excision repair protein JBrowse link 8 84,834,652 84,840,736 RGD:2290270
G Rad23b RAD23 homolog B, nucleotide excision repair protein JBrowse link 4 55,350,042 55,392,237 RGD:2290270
G Rbck1 RanBP-type and C3HC4-type zinc finger containing 1 JBrowse link 2 152,316,334 152,332,663 RGD:2290270
G Rffl ring finger and FYVE like domain containing protein JBrowse link 11 82,803,819 82,871,236 RGD:2290270
G Rmnd5a required for meiotic nuclear division 5 homolog A JBrowse link 6 71,388,634 71,440,637 RGD:2290270
G Rmnd5b required for meiotic nuclear division 5 homolog B JBrowse link 11 51,623,673 51,635,896 RGD:2290270
G Rnf122 ring finger protein 122 JBrowse link 8 31,111,827 31,133,318 RGD:2290270
G Rnf126 ring finger protein 126 JBrowse link 10 79,758,515 79,771,448 RGD:2290270
G Rnf186 ring finger protein 186 JBrowse link 4 138,967,119 138,968,365 RGD:2290270
G Rnf187 ring finger protein 187 JBrowse link 11 58,932,288 58,938,906 RGD:2290270
G Rnf216 ring finger protein 216 JBrowse link 5 142,990,893 143,113,041 RGD:2290270
G Rnf34 ring finger protein 34 JBrowse link 5 122,850,112 122,868,945 RGD:2290270
G Rnf4 ring finger protein 4 JBrowse link 5 34,336,250 34,353,445 RGD:2290270
G Siah1a siah E3 ubiquitin protein ligase 1A JBrowse link 8 86,720,454 86,746,006 RGD:2290270
G Siah1b siah E3 ubiquitin protein ligase 1B JBrowse link X 164,070,703 164,076,493 RGD:2290270
G Siah2 siah E3 ubiquitin protein ligase 2 JBrowse link 3 58,674,949 58,692,439 RGD:2290270
G Siah3 siah E3 ubiquitin protein ligase family member 3 JBrowse link 14 75,455,982 75,526,141 RGD:2290270
G Sirt1 sirtuin 1 JBrowse link 10 63,319,005 63,339,035 RGD:2290270
G Sirt2 sirtuin 2 JBrowse link 7 28,766,752 28,788,665 RGD:2290270
G Skp2 S-phase kinase-associated protein 2 JBrowse link 15 9,111,982 9,155,425 RGD:2290270
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 JBrowse link 5 144,876,495 144,965,899 RGD:2290270
G Smurf2 SMAD specific E3 ubiquitin protein ligase 2 JBrowse link 11 106,820,061 106,920,747 RGD:2290270
G Spop speckle-type BTB/POZ protein JBrowse link 11 95,414,083 95,493,410 RGD:2290270
G Spopfm1 speckle-type BTB/POZ protein family member 1 JBrowse link 3 94,264,036 94,267,176 RGD:2290270
G Spopfm2 speckle-type BTB/POZ protein family member 2 JBrowse link 3 94,174,412 94,178,193 RGD:2290270
G Spopfm3 speckle-type BTB/POZ protein family member 3 JBrowse link 3 94,196,714 94,199,827 RGD:2290270
G Spopl speckle-type BTB/POZ protein-like JBrowse link 2 23,507,466 23,572,132 RGD:2290270
G Spsb1 splA/ryanodine receptor domain and SOCS box containing 1 JBrowse link 4 149,896,283 149,955,006 RGD:2290270
G Spsb2 splA/ryanodine receptor domain and SOCS box containing 2 JBrowse link 6 124,808,604 124,810,619 RGD:2290270
G Spsb3 splA/ryanodine receptor domain and SOCS box containing 3 JBrowse link 17 24,886,013 24,892,149 RGD:2290270
G Spsb4 splA/ryanodine receptor domain and SOCS box containing 4 JBrowse link 9 96,943,482 97,018,355 RGD:2290270
G Stub1 STIP1 homology and U-Box containing protein 1 JBrowse link 17 25,830,634 25,832,919 RGD:2290270
G Tbl1x transducin (beta)-like 1 X-linked JBrowse link X 77,509,549 77,662,722 RGD:2290270
G Tbl1xr1 transducin (beta)-like 1X-linked receptor 1 JBrowse link 3 22,076,253 22,216,594 RGD:2290270
G Tbx21 T-box 21 JBrowse link 11 97,098,007 97,115,331 RGD:2290270
G Tdpoz1 TD and POZ domain containing 1 JBrowse link 3 93,669,333 93,676,283 RGD:2290270
G Tdpoz2 TD and POZ domain containing 2 JBrowse link 3 93,651,542 93,652,686 RGD:2290270
G Tdpoz3 TD and POZ domain containing 3 JBrowse link 3 93,826,020 93,827,117 RGD:2290270
G Tdpoz4 TD and POZ domain containing 4 JBrowse link 3 93,796,398 93,797,510 RGD:2290270
G Tdpoz5 TD and POZ domain containing 5 JBrowse link 3 93,960,292 93,961,314 RGD:2290270
G Tdpoz8 TD and POZ domain containing 8 JBrowse link 3 93,068,823 93,075,505 RGD:2290270
G Tdpoz9 predicted gene 9125 JBrowse link 3 94,047,981 94,054,885 RGD:2290270
G Tnfaip1 tumor necrosis factor, alpha-induced protein 1 (endothelial) JBrowse link 11 78,522,850 78,536,270 RGD:2290270
G Topors topoisomerase I binding, arginine/serine-rich JBrowse link 4 40,259,606 40,269,841 RGD:2290270
G Trim13 tripartite motif-containing 13 JBrowse link 14 61,598,226 61,610,287 RGD:2290270
G Trim2 tripartite motif-containing 2 JBrowse link 3 84,160,439 84,308,352 RGD:2290270
G Trim3 tripartite motif-containing 3 JBrowse link 7 105,604,463 105,633,574 RGD:2290270
G Trim38 tripartite motif-containing 38 JBrowse link 13 23,778,500 23,791,731 RGD:2290270
G Trim44 tripartite motif-containing 44 JBrowse link 2 102,300,119 102,400,900 RGD:2290270
G Trim54 tripartite motif-containing 54 JBrowse link 5 31,116,612 31,137,626 RGD:2290270
G Trim55 tripartite motif-containing 55 JBrowse link 3 19,644,344 19,692,584 RGD:2290270
G Trim63 tripartite motif-containing 63 JBrowse link 4 134,315,120 134,329,629 RGD:2290270
G Trim71 tripartite motif-containing 71 JBrowse link 9 114,511,268 114,564,369 RGD:2290270
G Trim72 tripartite motif-containing 72 JBrowse link 7 128,003,462 128,011,393 RGD:2290270
G Trim9 tripartite motif-containing 9 JBrowse link 12 70,244,533 70,347,869 RGD:2290270
G Ube2a ubiquitin-conjugating enzyme E2A JBrowse link X 36,874,295 36,884,222 RGD:2290270
G Ube2b ubiquitin-conjugating enzyme E2B JBrowse link 11 51,985,138 52,004,145 RGD:2290270
G Ube2cbp ubiquitin-conjugating enzyme E2C binding protein JBrowse link 9 86,307,234 86,464,976 RGD:2290270
G Ube2d3 ubiquitin-conjugating enzyme E2D 3 JBrowse link 3 135,438,232 135,468,214 RGD:2290270
G Ube2g1 ubiquitin-conjugating enzyme E2G 1 JBrowse link 11 72,607,261 72,686,481 RGD:2290270
G Ube2h ubiquitin-conjugating enzyme E2H JBrowse link 6 30,211,289 30,304,539 RGD:2290270
G Ube2i ubiquitin-conjugating enzyme E2I JBrowse link 17 25,260,510 25,275,799 RGD:2290270
G Ube2k ubiquitin-conjugating enzyme E2K JBrowse link 5 65,537,245 65,598,989 RGD:2290270
G Ube2w ubiquitin-conjugating enzyme E2W (putative) JBrowse link 1 16,540,788 16,619,460 RGD:2290270
G Ube4b ubiquitination factor E4B JBrowse link 4 149,328,416 149,428,161 RGD:2290270
G Ubxn11 UBX domain protein 11 JBrowse link 4 134,102,500 134,126,784 RGD:2290270
G Ubxn2a UBX domain protein 2A JBrowse link 12 4,876,979 4,907,716 RGD:2290270
G Ubxn2b UBX domain protein 2B JBrowse link 4 6,191,105 6,219,788 RGD:2290270
G Usp44 ubiquitin specific peptidase 44 JBrowse link 10 93,819,956 93,860,210 RGD:2290270
G Vcp valosin containing protein JBrowse link 4 42,979,964 43,000,507 RGD:2290270
G Wwp1 WW domain containing E3 ubiquitin protein ligase 1 JBrowse link 4 19,608,296 19,709,004 RGD:2290270
G Wwp2 WW domain containing E3 ubiquitin protein ligase 2 JBrowse link 8 107,436,334 107,559,290 RGD:2290270
G Zfand2b zinc finger, AN1 type domain 2B JBrowse link 1 75,168,646 75,171,626 RGD:2290270
G Znrf1 zinc and ring finger 1 JBrowse link 8 111,536,484 111,625,720 RGD:2290270
protein localization to cytosolic proteasome complex involved in ERAD pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atxn3 ataxin 3 JBrowse link 12 101,918,901 101,959,121 RGD:2290270
regulation of ER-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Herpud1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 JBrowse link 8 94,386,429 94,395,371 RGD:2290270
regulation of ERAD pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Usp19 ubiquitin specific peptidase 19 JBrowse link 9 108,490,607 108,502,337 RGD:2290270
regulation of proteasomal protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apoe apolipoprotein E JBrowse link 7 19,696,244 19,701,310 RGD:2290270
G Btrc beta-transducin repeat containing protein JBrowse link 19 45,363,688 45,533,343 RGD:2290270
G Dlgap1 DLG associated protein 1 JBrowse link 17 69,969,073 70,821,413 RGD:2290270
G Dnaaf4 dynein axonemal assembly factor 4 JBrowse link 9 72,957,372 72,973,689 RGD:2290270
G Epm2a epilepsy, progressive myoclonic epilepsy, type 2 gene alpha JBrowse link 10 11,342,691 11,459,664 RGD:2290270
G Gpx1 glutathione peroxidase 1 JBrowse link 9 108,339,080 108,340,342 RGD:2290270
G Nfe2l1 nuclear factor, erythroid derived 2,-like 1 JBrowse link 11 96,817,414 96,829,968 RGD:2290270
G Nudt15 nudix (nucleoside diphosphate linked moiety X)-type motif 15 JBrowse link 14 73,518,880 73,548,242 RGD:2290270
G Pkd1 polycystin 1, transient receptor poteintial channel interacting JBrowse link 17 24,548,689 24,596,514 RGD:2290270
G Prkaca protein kinase, cAMP dependent, catalytic, alpha JBrowse link 8 83,972,978 83,996,444 RGD:2290270
G Psmd14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 JBrowse link 2 61,711,694 61,800,376 RGD:2290270
G Psme1 proteasome (prosome, macropain) activator subunit 1 (PA28 alpha) JBrowse link 14 55,578,494 55,581,527 RGD:2290270
G Psme2 proteasome (prosome, macropain) activator subunit 2 (PA28 beta) JBrowse link 14 55,587,440 55,591,101 RGD:2290270
G Psme3 proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki) JBrowse link 11 101,316,213 101,323,537 RGD:2290270
G Rhbdf1 rhomboid 5 homolog 1 JBrowse link 11 32,209,585 32,222,331 RGD:2290270
G Tmf1 TATA element modulatory factor 1 JBrowse link 6 97,151,950 97,179,151 RGD:2290270
G Ubb ubiquitin B JBrowse link 11 62,551,171 62,553,213 RGD:2290270
G Uchl5 ubiquitin carboxyl-terminal esterase L5 JBrowse link 1 143,777,234 143,807,466 RGD:2290270
G Usp14 ubiquitin specific peptidase 14 JBrowse link 18 9,993,615 10,030,149 RGD:2290270
regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Araf Araf proto-oncogene, serine/threonine kinase JBrowse link X 20,797,707 20,860,521 RGD:2290270
G Commd1 COMM domain containing 1 JBrowse link 11 22,899,728 22,984,539 RGD:2290270
G Dda1 DET1 and DDB1 associated 1 JBrowse link 8 71,469,172 71,476,099 RGD:2290270
G Desi1 desumoylating isopeptidase 1 JBrowse link 15 81,992,523 82,016,258 RGD:2290270
G Foxf2 forkhead box F2 JBrowse link 13 31,625,816 31,631,406 RGD:2290270
G Glmn glomulin, FKBP associated protein JBrowse link 5 107,548,962 107,597,888 RGD:2290270
G Gna12 guanine nucleotide binding protein, alpha 12 JBrowse link 5 140,759,944 140,830,431 RGD:2290270
G Rad23a RAD23 homolog A, nucleotide excision repair protein JBrowse link 8 84,834,652 84,840,736 RGD:2290270
G Rad23b RAD23 homolog B, nucleotide excision repair protein JBrowse link 4 55,350,042 55,392,237 RGD:2290270
G Ube2k ubiquitin-conjugating enzyme E2K JBrowse link 5 65,537,245 65,598,989 RGD:2290270
G Ubqln4 ubiquilin 4 JBrowse link 3 88,553,677 88,569,725 RGD:2290270
G Ufl1 UFM1 specific ligase 1 JBrowse link 4 25,247,149 25,281,821 RGD:2290270
G Wnt10b wingless-type MMTV integration site family, member 10B JBrowse link 15 98,770,712 98,778,206 RGD:2290270
G Xpo1 exportin 1 JBrowse link 11 23,255,909 23,297,597 RGD:2290270
retrograde protein transport, ER to cytosol term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aup1 ancient ubiquitous protein 1 JBrowse link 6 83,054,495 83,057,682 RGD:2290270
G Derl1 Der1-like domain family, member 1 JBrowse link 15 57,869,502 57,892,418 RGD:2290270
G Derl2 Der1-like domain family, member 2 JBrowse link 11 71,007,440 71,019,841 RGD:2290270
G Erlec1 endoplasmic reticulum lectin 1 JBrowse link 11 30,862,794 30,954,386 RGD:2290270
G Faf2 Fas associated factor family member 2 JBrowse link 13 54,621,784 54,664,063 RGD:2290270
G Herpud1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 JBrowse link 8 94,386,429 94,395,371 RGD:2290270
G Hsp90b1 heat shock protein 90, beta (Grp94), member 1 JBrowse link 10 86,690,841 86,705,444 RGD:2290270
G Nploc4 NPL4 homolog, ubiquitin recognition factor JBrowse link 11 120,379,798 120,437,700 RGD:2290270
G Os9 amplified in osteosarcoma JBrowse link 10 127,094,259 127,121,160 RGD:2290270
G Sec61b Sec61 beta subunit JBrowse link 4 47,474,661 47,483,233 RGD:2290270
G Sel1l sel-1 suppressor of lin-12-like (C. elegans) JBrowse link 12 91,806,043 91,849,157 RGD:2290270
G Selenos selenoprotein S JBrowse link 7 66,079,649 66,089,405 RGD:2290270
G Syvn1 synovial apoptosis inhibitor 1, synoviolin JBrowse link 19 6,046,576 6,053,718 RGD:2290270
G Tmem129 transmembrane protein 129 JBrowse link 5 33,653,216 33,657,977 RGD:2290270
G Ufd1 ubiquitin recognition factor in ER-associated degradation 1 JBrowse link 16 18,811,736 18,835,261 RGD:2290270
G Vcp valosin containing protein JBrowse link 4 42,979,964 43,000,507 RGD:2290270
ribosome-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ltn1 listerin E3 ubiquitin protein ligase 1 JBrowse link 16 87,376,651 87,432,619 RGD:2290270
G Nemf nuclear export mediator factor JBrowse link 12 69,311,541 69,357,201 RGD:2290270
SCF-dependent proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Amn1 antagonist of mitotic exit network 1 JBrowse link 6 149,157,261 149,188,742 RGD:2290270
G Btrc beta-transducin repeat containing protein JBrowse link 19 45,363,688 45,533,343 RGD:2290270
G Ccnf cyclin F JBrowse link 17 24,223,230 24,251,409 RGD:2290270
G Cul1 cullin 1 JBrowse link 6 47,453,732 47,526,144 RGD:2290270
G Cul2 cullin 2 JBrowse link 18 3,382,970 3,436,700 RGD:2290270
G Cul4a cullin 4A JBrowse link 8 13,105,623 13,147,940 RGD:2290270
G Cul4b cullin 4B JBrowse link X 38,531,616 38,576,196 RGD:2290270
G Cul5 cullin 5 JBrowse link 9 53,614,581 53,667,507 RGD:2290270
G Dmac2 distal membrane arm assembly complex 2 JBrowse link 7 25,619,414 25,625,550 RGD:2290270
G Fbxl12 F-box and leucine-rich repeat protein 12 JBrowse link 9 20,637,749 20,644,768 RGD:2290270
G Fbxl13 F-box and leucine-rich repeat protein 13 JBrowse link 5 21,483,847 21,645,698 RGD:2290270
G Fbxl14 F-box and leucine-rich repeat protein 14 JBrowse link 6 119,479,668 119,483,886 RGD:2290270
G Fbxl15 F-box and leucine-rich repeat protein 15 JBrowse link 19 46,328,184 46,330,446 RGD:2290270
G Fbxl16 F-box and leucine-rich repeat protein 16 JBrowse link 17 25,808,432 25,821,265 RGD:2290270
G Fbxl17 F-box and leucine-rich repeat protein 17 JBrowse link 17 63,045,949 63,504,184 RGD:2290270
G Fbxl18 F-box and leucine-rich repeat protein 18 JBrowse link 5 142,866,946 142,896,721 RGD:2290270
G Fbxl2 F-box and leucine-rich repeat protein 2 JBrowse link 9 113,958,557 114,026,803 RGD:2290270
G Fbxl20 F-box and leucine-rich repeat protein 20 JBrowse link 11 98,082,554 98,150,921 RGD:2290270
G Fbxl21 F-box and leucine-rich repeat protein 21 JBrowse link 13 56,522,388 56,537,898 RGD:2290270
G Fbxl22 F-box and leucine-rich repeat protein 22 JBrowse link 9 66,508,459 66,514,593 RGD:2290270
G Fbxl3 F-box and leucine-rich repeat protein 3 JBrowse link 14 103,080,239 103,099,566 RGD:2290270
G Fbxl4 F-box and leucine-rich repeat protein 4 JBrowse link 4 22,357,526 22,434,091 RGD:2290270
G Fbxl5 F-box and leucine-rich repeat protein 5 JBrowse link 5 43,744,618 43,782,149 RGD:2290270
G Fbxl6 F-box and leucine-rich repeat protein 6 JBrowse link 15 76,535,723 76,538,746 RGD:2290270
G Fbxl7 F-box and leucine-rich repeat protein 7 JBrowse link 15 26,540,454 26,895,564 RGD:2290270
G Fbxl8 F-box and leucine-rich repeat protein 8 JBrowse link 8 105,264,648 105,269,326 RGD:2290270
G Fbxo17 F-box protein 17 JBrowse link 7 28,716,749 28,738,145 RGD:2290270
G Fbxo2 F-box protein 2 JBrowse link 4 148,160,198 148,166,420 RGD:2290270
G Fbxo27 F-box protein 27 JBrowse link 7 28,692,780 28,699,338 RGD:2290270
G Fbxo31 F-box protein 31 JBrowse link 8 121,549,443 121,578,864 RGD:2290270
G Fbxo33 F-box protein 33 JBrowse link 12 59,200,655 59,221,961 RGD:2290270
G Fbxo38 F-box protein 38 JBrowse link 18 62,504,059 62,548,863 RGD:2290270
G Fbxo39 F-box protein 39 JBrowse link 11 72,314,444 72,319,419 RGD:2290270
G Fbxo4 F-box protein 4 JBrowse link 15 3,963,564 3,979,573 RGD:2290270
G Fbxo44 F-box protein 44 JBrowse link 4 148,152,799 148,160,183 RGD:2290270
G Fbxo48 F-box protein 48 JBrowse link 11 16,951,224 16,954,777 RGD:2290270
G Fbxo6 F-box protein 6 JBrowse link 4 148,145,716 148,152,135 RGD:2290270
G Fbxo9 f-box protein 9 JBrowse link 9 78,081,499 78,109,065 RGD:2290270
G Fbxw11 F-box and WD-40 domain protein 11 JBrowse link 11 32,642,555 32,746,816 RGD:2290270
G Fbxw4 F-box and WD-40 domain protein 4 JBrowse link 19 45,578,254 45,660,520 RGD:2290270
G Fbxw5 F-box and WD-40 domain protein 5 JBrowse link 2 25,500,750 25,505,470 RGD:2290270
G Fbxw7 F-box and WD-40 domain protein 7 JBrowse link 3 84,814,990 84,979,198 RGD:2290270
G Kif14 kinesin family member 14 JBrowse link 1 136,466,301 136,555,938 RGD:2290270
G Lrrc29 leucine rich repeat containing 29 JBrowse link 8 105,312,340 105,326,320 RGD:2290270
G Nccrp1 non-specific cytotoxic cell receptor protein 1 homolog (zebrafish) JBrowse link 7 28,543,592 28,547,748 RGD:2290270
G Rbx1 ring-box 1 JBrowse link 15 81,466,316 81,476,369 RGD:2290270
G Skp1 S-phase kinase-associated protein 1 JBrowse link 11 52,230,522 52,246,858 RGD:2290270
G Skp2 S-phase kinase-associated protein 2 JBrowse link 15 9,111,982 9,155,425 RGD:2290270
G Wwtr1 WW domain containing transcription regulator 1 JBrowse link 3 57,455,644 57,575,910 RGD:2290270
transcription factor catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Taf1 TATA-box binding protein associated factor 1 JBrowse link X 101,527,572 101,601,789 RGD:2290270
ubiquitin-dependent ERAD pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G 4931417E11Rik RIKEN cDNA 4931417E11 gene JBrowse link 6 73,468,573 73,469,667 RGD:2290270
G Amfr autocrine motility factor receptor JBrowse link 8 93,971,588 94,012,640 RGD:2290270
G Ankzf1 ankyrin repeat and zinc finger domain containing 1 JBrowse link 1 75,192,160 75,199,387 RGD:2290270
G Aup1 ancient ubiquitous protein 1 JBrowse link 6 83,054,495 83,057,682 RGD:2290270
G Bag6 BCL2-associated athanogene 6 JBrowse link 17 35,135,156 35,147,322 RGD:2290270
G Ccdc47 coiled-coil domain containing 47 JBrowse link 11 106,199,260 106,216,523 RGD:2290270
G Derl1 Der1-like domain family, member 1 JBrowse link 15 57,869,502 57,892,418 RGD:2290270
G Derl2 Der1-like domain family, member 2 JBrowse link 11 71,007,440 71,019,841 RGD:2290270
G Derl3 Der1-like domain family, member 3 JBrowse link 10 75,893,398 75,895,941 RGD:2290270
G Dnajb12 DnaJ heat shock protein family (Hsp40) member B12 JBrowse link 10 59,879,571 59,899,302 RGD:2290270
G Dnajb14 DnaJ heat shock protein family (Hsp40) member B14 JBrowse link 3 137,867,675 137,916,563 RGD:2290270
G Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 JBrowse link 1 75,236,395 75,245,692 RGD:2290270
G Dnajb9 DnaJ heat shock protein family (Hsp40) member B9 JBrowse link 12 44,205,897 44,210,068 RGD:2290270
G Dnajc10 DnaJ heat shock protein family (Hsp40) member C10 JBrowse link 2 80,315,446 80,354,055 RGD:2290270
G Dnajc18 DnaJ heat shock protein family (Hsp40) member C18 JBrowse link 18 35,671,103 35,708,418 RGD:2290270
G Ecpas Ecm29 proteasome adaptor and scaffold JBrowse link 4 58,797,234 58,917,748 RGD:2290270
G Edem1 ER degradation enhancer, mannosidase alpha-like 1 JBrowse link 6 108,824,045 108,859,356 RGD:2290270
G Erlec1 endoplasmic reticulum lectin 1 JBrowse link 11 30,862,794 30,954,386 RGD:2290270
G Erlin1 ER lipid raft associated 1 JBrowse link 19 44,034,943 44,070,164 RGD:2290270
G Erlin2 ER lipid raft associated 2 JBrowse link 8 27,022,408 27,039,437 RGD:2290270
G Faf2 Fas associated factor family member 2 JBrowse link 13 54,621,784 54,664,063 RGD:2290270
G Fbxo17 F-box protein 17 JBrowse link 7 28,716,749 28,738,145 RGD:2290270
G Fbxo2 F-box protein 2 JBrowse link 4 148,160,198 148,166,420 RGD:2290270
G Fbxo27 F-box protein 27 JBrowse link 7 28,692,780 28,699,338 RGD:2290270
G Fbxo44 F-box protein 44 JBrowse link 4 148,152,799 148,160,183 RGD:2290270
G Fbxo6 F-box protein 6 JBrowse link 4 148,145,716 148,152,135 RGD:2290270
G Foxred2 FAD-dependent oxidoreductase domain containing 2 JBrowse link 15 77,940,522 77,958,503 RGD:2290270
G Hsp90b1 heat shock protein 90, beta (Grp94), member 1 JBrowse link 10 86,690,841 86,705,444 RGD:2290270
G Hspa5 heat shock protein 5 JBrowse link 2 34,772,090 34,776,529 RGD:2290270
G Jkamp JNK1/MAPK8-associated membrane protein JBrowse link 12 72,085,548 72,101,527 RGD:2290270
G Man1b1 mannosidase, alpha, class 1B, member 1 JBrowse link 2 25,332,730 25,352,213 RGD:2290270
G Marchf6 membrane associated ring-CH-type finger 6 JBrowse link 15 31,455,899 31,531,082 RGD:2290270
G Nccrp1 non-specific cytotoxic cell receptor protein 1 homolog (zebrafish) JBrowse link 7 28,543,592 28,547,748 RGD:2290270
G Nrros negative regulator of reactive oxygen species JBrowse link 16 32,142,785 32,165,594 RGD:2290270
G Os9 amplified in osteosarcoma JBrowse link 10 127,094,259 127,121,160 RGD:2290270
G Psmc6 proteasome (prosome, macropain) 26S subunit, ATPase, 6 JBrowse link 14 45,329,823 45,349,074 RGD:2290270
G Rnf103 ring finger protein 103 JBrowse link 6 71,493,844 71,510,880 RGD:2290270
G Rnf121 ring finger protein 121 JBrowse link 7 102,019,137 102,072,437 RGD:2290270
G Rnf185 ring finger protein 185 JBrowse link 11 3,415,973 3,452,956 RGD:2290270
G Rnf5 ring finger protein 5 JBrowse link 17 34,601,099 34,603,561 RGD:2290270
G Sec61b Sec61 beta subunit JBrowse link 4 47,474,661 47,483,233 RGD:2290270
G Sel1l sel-1 suppressor of lin-12-like (C. elegans) JBrowse link 12 91,806,043 91,849,157 RGD:2290270
G Sel1l2 sel-1 suppressor of lin-12-like 2 (C. elegans) JBrowse link 2 140,229,599 140,389,710 RGD:2290270
G Selenos selenoprotein S JBrowse link 7 66,079,649 66,089,405 RGD:2290270
G Sgta small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha JBrowse link 10 81,044,071 81,060,271 RGD:2290270
G Sgtb small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta JBrowse link 13 104,109,723 104,141,861 RGD:2290270
G Stt3b STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae) JBrowse link 9 115,242,470 115,310,468 RGD:2290270
G Stub1 STIP1 homology and U-Box containing protein 1 JBrowse link 17 25,830,634 25,832,919 RGD:2290270
G Syvn1 synovial apoptosis inhibitor 1, synoviolin JBrowse link 19 6,046,576 6,053,718 RGD:2290270
G Tmem129 transmembrane protein 129 JBrowse link 5 33,653,216 33,657,977 RGD:2290270
G Tmem67 transmembrane protein 67 JBrowse link 4 12,039,355 12,090,020 RGD:2290270
G Tmub1 transmembrane and ubiquitin-like domain containing 1 JBrowse link 5 24,445,463 24,451,704 RGD:2290270
G Tmub2 transmembrane and ubiquitin-like domain containing 2 JBrowse link 11 102,284,925 102,289,427 RGD:2290270
G Trim13 tripartite motif-containing 13 JBrowse link 14 61,598,226 61,610,287 RGD:2290270
G Trim25 tripartite motif-containing 25 JBrowse link 11 88,999,403 89,020,294 RGD:2290270
G Ube2g2 ubiquitin-conjugating enzyme E2G 2 JBrowse link 10 77,622,321 77,645,990 RGD:2290270
G Ube2j1 ubiquitin-conjugating enzyme E2J 1 JBrowse link 4 33,031,380 33,052,367 RGD:2290270
G Ube2j2 ubiquitin-conjugating enzyme E2J 2 JBrowse link 4 155,943,813 155,959,604 RGD:2290270
G Ube4a ubiquitination factor E4A JBrowse link 9 44,923,127 44,965,615 RGD:2290270
G Ube4b ubiquitination factor E4B JBrowse link 4 149,328,416 149,428,161 RGD:2290270
G Ubqln1 ubiquilin 1 JBrowse link 13 58,176,156 58,215,653 RGD:2290270
G Ubqln2 ubiquilin 2 JBrowse link X 153,498,232 153,501,562 RGD:2290270
G Ubxn4 UBX domain protein 4 JBrowse link 1 128,243,898 128,279,378 RGD:2290270
G Ubxn8 UBX domain protein 8 JBrowse link 8 33,619,586 33,645,476 RGD:2290270
G Ufd1 ubiquitin recognition factor in ER-associated degradation 1 JBrowse link 16 18,811,736 18,835,261 RGD:2290270
G Usp19 ubiquitin specific peptidase 19 JBrowse link 9 108,490,607 108,502,337 RGD:2290270
G Vcp valosin containing protein JBrowse link 4 42,979,964 43,000,507 RGD:2290270
G Wfs1 wolframin ER transmembrane glycoprotein JBrowse link 5 36,966,104 36,988,982 RGD:2290270
G Yod1 YOD1 deubiquitinase JBrowse link 1 130,717,327 130,722,073 RGD:2290270
ubiquitin-dependent glycoprotein ERAD pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Edem1 ER degradation enhancer, mannosidase alpha-like 1 JBrowse link 6 108,824,045 108,859,356 RGD:2290270
G Edem2 ER degradation enhancer, mannosidase alpha-like 2 JBrowse link 2 155,701,673 155,729,475 RGD:2290270
G Fbxo6 F-box protein 6 JBrowse link 4 148,145,716 148,152,135 RGD:2290270
ubiquitin-dependent protein catabolic process via the N-end rule pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ubr1 ubiquitin protein ligase E3 component n-recognin 1 JBrowse link 2 120,860,272 120,970,760 RGD:2290270
G Ubr2 ubiquitin protein ligase E3 component n-recognin 2 JBrowse link 17 46,928,291 47,010,886 RGD:2290270
G Ubr3 ubiquitin protein ligase E3 component n-recognin 3 JBrowse link 2 69,896,932 70,024,010 RGD:2290270

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 23155
    metabolic process 10896
      primary metabolic process 9539
        protein metabolic process 5314
          protein catabolic process 934
            proteasomal protein catabolic process 468
              ERAD pathway + 97
              negative regulation of proteasomal protein catabolic process + 55
              positive regulation of proteasomal protein catabolic process + 109
              proteasomal ubiquitin-independent protein catabolic process 22
              proteasome-mediated ubiquitin-dependent protein catabolic process + 406
              regulation of proteasomal protein catabolic process + 188
Path 2
Term Annotations click to browse term
  biological_process 23155
    metabolic process 10896
      organic substance metabolic process 10351
        organonitrogen compound metabolic process 6131
          protein metabolic process 5314
            protein catabolic process 934
              cellular protein catabolic process 774
                proteolysis involved in cellular protein catabolic process 724
                  proteasomal protein catabolic process 468
                    ERAD pathway + 97
                    negative regulation of proteasomal protein catabolic process + 55
                    positive regulation of proteasomal protein catabolic process + 109
                    proteasomal ubiquitin-independent protein catabolic process 22
                    proteasome-mediated ubiquitin-dependent protein catabolic process + 406
                    regulation of proteasomal protein catabolic process + 188
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.