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ONTOLOGY REPORT - ANNOTATIONS


Term:programmed cell death involved in cell development
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Accession:GO:0010623 term browser browse the term
Definition:The activation of endogenous cellular processes that result in the death of a cell as part of its development.
Comment:This process is part of the natural developmental program of some cell types, but it does not always happen as part of the development or shaping of a gross anatomical structure.
Synonyms:broad_synonym: developmental programmed cell death;   programmed cell death involved in development


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programmed cell death involved in cell development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnase1l3 deoxyribonuclease 1-like 3 JBrowse link 15 18,710,492 18,736,476 RGD:1624291
RGD:13792537
G Ntrk1 neurotrophic receptor tyrosine kinase 1 JBrowse link 2 187,143,568 187,160,373 RGD:8554835
ectopic germ cell programmed cell death term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bax BCL2 associated X, apoptosis regulator JBrowse link 1 101,451,801 101,457,207 RGD:1600115
RGD:1624291
G Casp2 caspase 2 JBrowse link 4 71,652,358 71,670,228 RGD:1624291
RGD:1600115
G Casp4 caspase 4 JBrowse link 8 2,616,391 2,651,682 RGD:1624291
RGD:1600115
G Il1a interleukin 1 alpha JBrowse link 3 121,824,712 121,836,122 RGD:1624291
RGD:1600115
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:1624291
RGD:1600115
G Kit KIT proto-oncogene receptor tyrosine kinase JBrowse link 14 35,072,131 35,149,638 RGD:1624291
RGD:1600115
G Kitlg KIT ligand JBrowse link 7 42,269,784 42,351,054 RGD:1624291
RGD:1600115
G Prkdc protein kinase, DNA-activated, catalytic subunit JBrowse link 11 89,293,547 89,510,948 RGD:1624291
RGD:1600115
negative regulation of retinal cell programmed cell death term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:1624291
RGD:1600115
G Bhlhe23 basic helix-loop-helix family, member e23 JBrowse link 3 176,279,997 176,282,211 RGD:1624291
RGD:1600115
positive regulation of retinal cell programmed cell death term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Casp6 caspase 6 JBrowse link 2 235,341,326 235,353,715 RGD:2301324
regulation of retinal cell programmed cell death term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bdnf brain-derived neurotrophic factor JBrowse link 3 100,768,637 100,819,216 RGD:1624291
G Cntf ciliary neurotrophic factor JBrowse link 1 229,599,009 229,601,032 RGD:1624291
RGD:1600115
G Fgf2 fibroblast growth factor 2 JBrowse link 2 124,081,072 124,134,133 RGD:1624291
RGD:1600115
retinal cell programmed cell death term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bax BCL2 associated X, apoptosis regulator JBrowse link 1 101,451,801 101,457,207 RGD:1624291
RGD:1600115
G Faslg Fas ligand JBrowse link 13 79,696,811 79,717,581 RGD:1624291
RGD:1600115
G Slc4a7 solute carrier family 4 member 7 JBrowse link 15 11,832,611 11,912,923 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19317
    developmental process 6647
      cellular developmental process 4428
        programmed cell death involved in cell development 18
          antipodal cell degeneration 0
          ectopic germ cell programmed cell death 8
          larval midgut cell programmed cell death 0
          nurse cell apoptotic process + 0
          retinal cell programmed cell death + 9
          salivary gland cell autophagic cell death + 0
          synergid death 0
Path 2
Term Annotations click to browse term
  biological_process 19317
    developmental process 6647
      cellular developmental process 4428
        cell differentiation 4205
          cell development 2477
            programmed cell death involved in cell development 18
              antipodal cell degeneration 0
              ectopic germ cell programmed cell death 8
              larval midgut cell programmed cell death 0
              nurse cell apoptotic process + 0
              retinal cell programmed cell death + 9
              salivary gland cell autophagic cell death + 0
              synergid death 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.