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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of collagen catabolic process
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Accession:GO:0010710 term browser browse the term
Definition:Any process that modulates the rate, frequency or extent of collagen catabolism. Collagen catabolism is the proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix.
Synonyms:exact_synonym: regulation of collagen breakdown;   regulation of collagen catabolism;   regulation of collagen degradation


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regulation of collagen catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fap fibroblast activation protein, alpha ISO (PMID:10455171) RGD PMID:10455171 NCBI chr 3:48,467,781...48,536,242
Ensembl chr 3:48,467,781...48,536,235
JBrowse link
G Itgb1 integrin subunit beta 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:10455171)
Ensembl
UniProt
RGD
PMID:10455171 GO_REF:0000024, GO_REF:0000107 NCBI chr19:61,677,512...61,725,537
Ensembl chr19:61,677,542...61,725,535
JBrowse link
negative regulation of collagen catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cst3 cystatin C ISO (PMID:10545518) RGD PMID:10545518 NCBI chr 3:143,219,671...143,223,544
Ensembl chr 3:143,219,686...143,223,615
JBrowse link
positive regulation of collagen catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Idua alpha-L-iduronidase ISO MGI:MGI:2176236 (MGI:MGI:4397742|PMID:19834056) RGD PMID:19834056 MGI:MGI:4397742 NCBI chr14:2,041,828...2,056,762
Ensembl chr14:2,042,411...2,056,762
JBrowse link
G Vsir V-set immunoregulatory receptor ISO (PMID:20666777) RGD PMID:20666777 NCBI chr20:29,897,543...29,923,381
Ensembl chr20:29,897,594...29,919,998
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20028
    metabolic process 12271
      catabolic process 2560
        regulation of catabolic process 915
          regulation of collagen catabolic process 5
            negative regulation of collagen catabolic process 1
            positive regulation of collagen catabolic process 2
Path 2
Term Annotations click to browse term
  biological_process 20028
    biological regulation 13773
      regulation of biological process 13075
        regulation of metabolic process 6996
          regulation of collagen metabolic process 57
            regulation of collagen catabolic process 5
              negative regulation of collagen catabolic process 1
              positive regulation of collagen catabolic process 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.