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ONTOLOGY REPORT - ANNOTATIONS


Term:heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process
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Accession:GO:0015014 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of polysaccharide chain component of heparan sulfate proteoglycan.
Synonyms:exact_synonym: heparan sulfate proteoglycan anabolism, polysaccharide chain anabolism;   heparan sulfate proteoglycan chain elongation;   heparan sulfate proteoglycan formation, polysaccharide chain biosynthesis;   heparan sulfate proteoglycan formation, polysaccharide chain formation;   heparan sulfate proteoglycan synthesis, polysaccharide chain synthesis;   heparan sulphate proteoglycan biosynthesis, polysaccharide chain biosynthesis;   heparan sulphate proteoglycan biosynthesis, polysaccharide chain biosynthetic process
 related_synonym: heparin proteoglycan biosynthetic process, polysaccharide chain biosynthetic process


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heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ext1 exostosin glycosyltransferase 1 JBrowse link 7 92,605,008 92,881,392 RGD:1624291
G Ext2 exostosin glycosyltransferase 2 JBrowse link 3 82,602,784 82,734,557 RGD:1624291
G Hs2st1 heparan sulfate 2-O-sulfotransferase 1 JBrowse link 2 250,467,428 250,600,517 RGD:1624291
RGD:13792537
G Ndst1 N-deacetylase and N-sulfotransferase 1 JBrowse link 18 55,951,497 56,014,107 RGD:13792537
G Ndst2 N-deacetylase and N-sulfotransferase 2 JBrowse link 15 3,995,797 4,006,491 RGD:13792537
G Ndst3 N-deacetylase and N-sulfotransferase 3 JBrowse link 2 227,736,491 227,903,657 RGD:1624291
RGD:13792537
G Ndst4 N-deacetylase and N-sulfotransferase 4 JBrowse link 2 229,170,781 229,496,732 RGD:13792537
G NEWGENE_1304700 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2 JBrowse link 15 3,750,058 3,760,616 RGD:13792537

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19578
    metabolic process 11901
      biosynthetic process 5967
        cellular biosynthetic process 5791
          cellular carbohydrate biosynthetic process 79
            cellular polysaccharide biosynthetic process 67
              heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process 8
Path 2
Term Annotations click to browse term
  biological_process 19578
    metabolic process 11901
      organic substance metabolic process 11299
        macromolecule metabolic process 9767
          cellular macromolecule metabolic process 8223
            cellular macromolecule biosynthetic process 4805
              glycoprotein biosynthetic process 292
                proteoglycan biosynthetic process 49
                  heparan sulfate proteoglycan biosynthetic process 23
                    heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process 8
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.